View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2811_1D_low_42 (Length: 212)
Name: NF2811_1D_low_42
Description: NF2811_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2811_1D_low_42 |
 | |
|
| [»] scaffold0596 (1 HSPs) |
| | |
|
| [»] scaffold0045 (1 HSPs) |
| | |
|
| [»] scaffold0035 (1 HSPs) |
| | |
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Alignment Details
Target: chr7 (Bit Score: 141; Significance: 4e-74; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 20 - 206
Target Start/End: Original strand, 43070865 - 43071054
Alignment:
| Q |
20 |
ggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacagga-----gatttagga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
43070865 |
ggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacaggaacaacgatttagga |
43070964 |
T |
|
| Q |
115 |
tatatgtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaacggcggaggtgatgttgtaatcgagagcattggtga |
206 |
Q |
| |
|
|||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||| |
|
|
| T |
43070965 |
tata--tatagtagcatcttcaacacacctggctgatacgatgccgcagacgacaacggcgaaggtgatgtcggaatcgagagcattggtga |
43071054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 143 - 206
Target Start/End: Original strand, 48849391 - 48849454
Alignment:
| Q |
143 |
ctggctgatacgatgccgcagacgacaacggcggaggtgatgttgtaatcgagagcattggtga |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||| |
|
|
| T |
48849391 |
ctggctgatacgatgccgcagacgacaacggcgaaggtgatgtcggaatcgagagcattggtga |
48849454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 143 - 206
Target Start/End: Complemental strand, 1262601 - 1262538
Alignment:
| Q |
143 |
ctggctgatacgatgccgcagacgacaacggcggaggtgatgttgtaatcgagagcattggtga |
206 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| ||||||||| | |||||||||||||||||| |
|
|
| T |
1262601 |
ctggctgatacgatgccgcatacgacaacggcgaaggtgatgtcggaatcgagagcattggtga |
1262538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 141; Significance: 4e-74; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 20 - 206
Target Start/End: Original strand, 19881594 - 19881783
Alignment:
| Q |
20 |
ggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacagga-----gatttagga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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|
| T |
19881594 |
ggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacaggaacaacgatttagga |
19881693 |
T |
|
| Q |
115 |
tatatgtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaacggcggaggtgatgttgtaatcgagagcattggtga |
206 |
Q |
| |
|
|||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||| |
|
|
| T |
19881694 |
tata--tatagtagcatcttcaacacacctggctgatacgatgccgcagacgacaacggcgaaggtgatgtcggaatcgagagcattggtga |
19881783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 20 - 206
Target Start/End: Original strand, 53972769 - 53972958
Alignment:
| Q |
20 |
ggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacagga-----gatttagga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
53972769 |
ggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacaggaacaacgatttagga |
53972868 |
T |
|
| Q |
115 |
tatatgtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaacggcggaggtgatgttgtaatcgagagcattggtga |
206 |
Q |
| |
|
|||| ||||| | |||||||||||||| ||||||||||||||||||||||||||||| || | ||||||| | |||||||||||||||||| |
|
|
| T |
53972869 |
tata--tatagtagcatcttcaacacacttggctgatacgatgccgcagacgacaacgacgaaagtgatgtcggaatcgagagcattggtga |
53972958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 37983046 - 37982961
Alignment:
| Q |
20 |
ggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacagga |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37983046 |
ggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacagga |
37982961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 129 - 206
Target Start/End: Complemental strand, 37982878 - 37982801
Alignment:
| Q |
129 |
catcttcaacacacctggctgatacgatgccgcagacgacaacggcggaggtgatgttgtaatcgagagcattggtga |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||| | |||||||||||||||||| |
|
|
| T |
37982878 |
catcttcaacacacctggctgatacgatgccgcagacgacaacgacgaaggtgatgtcggaatcgagagcattggtga |
37982801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 143 - 206
Target Start/End: Complemental strand, 31685575 - 31685512
Alignment:
| Q |
143 |
ctggctgatacgatgccgcagacgacaacggcggaggtgatgttgtaatcgagagcattggtga |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||| | |||||| | ||||||||| |
|
|
| T |
31685575 |
ctggctgatacgatgccgcagacgacaacggcgaaggtgatgtcggaatcgatatcattggtga |
31685512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 141; Significance: 4e-74; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 20 - 206
Target Start/End: Original strand, 23348463 - 23348652
Alignment:
| Q |
20 |
ggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacagga-----gatttagga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
23348463 |
ggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacaggaacaacgatttagga |
23348562 |
T |
|
| Q |
115 |
tatatgtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaacggcggaggtgatgttgtaatcgagagcattggtga |
206 |
Q |
| |
|
|||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||| |
|
|
| T |
23348563 |
tata--tatagtagcatcttcaacacacctggctgatacgatgccgcagacgacaacggcgaaggtgatgtcggaatcgagagcattggtga |
23348652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 20 - 206
Target Start/End: Complemental strand, 12742326 - 12742137
Alignment:
| Q |
20 |
ggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacagga-----gatttagga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
12742326 |
ggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacaggaacaacgatttagga |
12742227 |
T |
|
| Q |
115 |
tatatgtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaacggcggaggtgatgttgtaatcgagagcattggtga |
206 |
Q |
| |
|
|||| ||||| | |||||||||||||||| ||||||||||||||||||||||||||| || ||||||||| | |||||||||||||||||| |
|
|
| T |
12742226 |
tata--tatagtagcatcttcaacacaccttgctgatacgatgccgcagacgacaacgacgaaggtgatgtcggaatcgagagcattggtga |
12742137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 20 - 206
Target Start/End: Original strand, 18354790 - 18354985
Alignment:
| Q |
20 |
ggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacagga-----gatttagg- |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
18354790 |
ggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagctacaggaacaacgatttagga |
18354889 |
T |
|
| Q |
114 |
---atatatgtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaacggcggaggtgatgttgtaatcgagagcattggtga |
206 |
Q |
| |
|
|||||| ||||| | ||||||||||||||||| ||||||||| ||||||||| ||||| ||| ||||||||| | |||||||||||||||||| |
|
|
| T |
18354890 |
tatatatatatatagtagcatcttcaacacacctgactgatacgacgccgcagacaacaacagcgaaggtgatgtcggaatcgagagcattggtga |
18354985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 10328508 - 10328627
Alignment:
| Q |
20 |
ggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacagga-----gatttagga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||| |
|
|
| T |
10328508 |
ggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagatacatgaacaacgatttagga |
10328607 |
T |
|
| Q |
115 |
tatatgtatagcatcatctt |
134 |
Q |
| |
|
||||| ||||| | |||||| |
|
|
| T |
10328608 |
tatatatatagtagcatctt |
10328627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 139; Significance: 6e-73; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 20 - 206
Target Start/End: Original strand, 7472968 - 7473161
Alignment:
| Q |
20 |
ggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacagga-----gatttagg- |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
7472968 |
ggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacaggaacaacgatttagga |
7473067 |
T |
|
| Q |
114 |
-atatatgtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaacggcggaggtgatgttgtaatcgagagcattggtga |
206 |
Q |
| |
|
|||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||| |
|
|
| T |
7473068 |
tatatatatatagtagcatcttcaacacacctggctgatacgatgccgcagacgacaacggcgaaggtgatgtcggaatcgagagcattggtga |
7473161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 20 - 206
Target Start/End: Complemental strand, 9044440 - 9044251
Alignment:
| Q |
20 |
ggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacagga-----gatttagga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
9044440 |
ggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacaggaacaacgatttagga |
9044341 |
T |
|
| Q |
115 |
tatatgtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaacggcggaggtgatgttgtaatcgagagcattggtga |
206 |
Q |
| |
|
|||| ||||| | |||||||||||||| ||||||||||||||| ||||||||||||| || ||||||||| | |||||||||||||||||| |
|
|
| T |
9044340 |
tata--tatagtagcatcttcaacacacttggctgatacgatgctgcagacgacaacgacgaaggtgatgtcgaaatcgagagcattggtga |
9044251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 20 - 206
Target Start/End: Original strand, 30442029 - 30442218
Alignment:
| Q |
20 |
ggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacagga-----gatttagga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
30442029 |
ggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacaggaacaacgatttagga |
30442128 |
T |
|
| Q |
115 |
tatatgtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaacggcggaggtgatgttgtaatcgagagcattggtga |
206 |
Q |
| |
|
|||| ||||| | ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||| |
|
|
| T |
30442129 |
tata--tatagtagcatcttcaacacatatggctgatacgatgccgcagacgacaacggccaaggtgatgtcggaatcgagagcattggtga |
30442218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 40163983 - 40163917
Alignment:
| Q |
21 |
gtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttag |
90 |
Q |
| |
|
||||||||||| ||||||||| |||||| | ||||||||| ||| || |||||||||||||||||||| |
|
|
| T |
40163983 |
gtaaaatctatgtaaatatca---attcacatccaaacaaactaaatatataatggaataacaaagttag |
40163917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0596 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0596
Description:
Target: scaffold0596; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 20 - 206
Target Start/End: Complemental strand, 1292 - 1103
Alignment:
| Q |
20 |
ggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacagga-----gatttagga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
1292 |
ggtaaaatctatttaaatatcatcaattcacttacaaacaaaccaaaaatgtaatggaataacaaagttagggaaaagttacaggaacaacgatttagga |
1193 |
T |
|
| Q |
115 |
tatatgtatagcatcatcttcaacacacctggctgatacgatgccgcagacgacaacggcggaggtgatgttgtaatcgagagcattggtga |
206 |
Q |
| |
|
|||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| | |||||||||||||||||| |
|
|
| T |
1192 |
tata--tatagtagcatcttcaacacacctggctgatacgatgccgcagacgacaacggcgaaagtgatgtcggaatcgagagcattggtga |
1103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 49; Significance: 3e-19; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 142 - 206
Target Start/End: Original strand, 14677630 - 14677694
Alignment:
| Q |
142 |
cctggctgatacgatgccgcagacgacaacggcggaggtgatgttgtaatcgagagcattggtga |
206 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| ||||||||| | |||||||||||||||||| |
|
|
| T |
14677630 |
cctggctgatacgatgctgcagacgacaacggcgaaggtgatgtcggaatcgagagcattggtga |
14677694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 142 - 206
Target Start/End: Original strand, 31100480 - 31100544
Alignment:
| Q |
142 |
cctggctgatacgatgccgcagacgacaacggcggaggtgatgttgtaatcgagagcattggtga |
206 |
Q |
| |
|
||||| |||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
31100480 |
cctggatgatacgatgccacagacgacaacggcgaaggtgatgttggaatcgagagcattggtga |
31100544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 143 - 206
Target Start/End: Complemental strand, 5658268 - 5658205
Alignment:
| Q |
143 |
ctggctgatacgatgccgcagacgacaacggcggaggtgatgttgtaatcgagagcattggtga |
206 |
Q |
| |
|
|||| |||||||||||| ||||||||||||||| ||||||||||| |||| ||||||||||||| |
|
|
| T |
5658268 |
ctggatgatacgatgccacagacgacaacggcgaaggtgatgttggaatcaagagcattggtga |
5658205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 10092985 - 10092921
Alignment:
| Q |
142 |
cctggctgatacgatgccgcagacgacaacggcggaggtgatgttgtaatcgagagcattggtga |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||| || ||||||||| | |||||||||||||||||| |
|
|
| T |
10092985 |
cctggctgatacgatgccgcagacgacaacgacgaaggtgatgtcggaatcgagagcattggtga |
10092921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 142 - 206
Target Start/End: Original strand, 33045054 - 33045118
Alignment:
| Q |
142 |
cctggctgatacgatgccgcagacgacaacggcggaggtgatgttgtaatcgagagcattggtga |
206 |
Q |
| |
|
||||| ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||| |
|
|
| T |
33045054 |
cctggatgatacgatgccgcagacgacaacgacgaaggtgatgttggaatcgagagcattggtga |
33045118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0045 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0045
Description:
Target: scaffold0045; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 206
Target Start/End: Original strand, 11242 - 11306
Alignment:
| Q |
142 |
cctggctgatacgatgccgcagacgacaacggcggaggtgatgttgtaatcgagagcattggtga |
206 |
Q |
| |
|
|||||||||| | ||||||||||||||||||||| ||||||||| | | |||||||||||||||| |
|
|
| T |
11242 |
cctggctgatgcaatgccgcagacgacaacggcgaaggtgatgtcggattcgagagcattggtga |
11306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0035 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0035
Description:
Target: scaffold0035; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 200
Target Start/End: Complemental strand, 35574 - 35516
Alignment:
| Q |
142 |
cctggctgatacgatgccgcagacgacaacggcggaggtgatgttgtaatcgagagcat |
200 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||| |
|
|
| T |
35574 |
cctggctgatacgatgccgcaaacgacaacggcgaaggtgatgtcagaatcgagagcat |
35516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 206
Target Start/End: Original strand, 29862969 - 29863033
Alignment:
| Q |
142 |
cctggctgatacgatgccgcagacgacaacggcggaggtgatgttgtaatcgagagcattggtga |
206 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| | ||||||| | |||||||||||| ||||| |
|
|
| T |
29862969 |
cctggctgatacgatgccgcagatgacaacggcaaaagtgatgtcggaatcgagagcatcggtga |
29863033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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