View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2811_1D_low_47 (Length: 207)
Name: NF2811_1D_low_47
Description: NF2811_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2811_1D_low_47 |
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Alignment Details
Target: chr7 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 15 - 201
Target Start/End: Original strand, 37936199 - 37936385
Alignment:
| Q |
15 |
acattagatgattgaagctaataattaagaatgacaatcgagtataatcatatgtgtcggtgctttacaatgttggactagacatgtcttctatcagaaa |
114 |
Q |
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| T |
37936199 |
acattagataattgaagctaataattaagaatgacaatcgagtataatcatatgtgtcggtgctttacaatgttggaccagacacgtcttctatcataaa |
37936298 |
T |
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| Q |
115 |
ttatcgagaaaattcacaaatttggcttagtacctgaatcctcgcatagtcagtacggttccaactgaaggcatttcccaacatctg |
201 |
Q |
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| T |
37936299 |
ttatcgagaaaattcacaaatttggcttagtacctgaatcctcgcatagtcagtacggttccaactgaaggcatttcccaacatctg |
37936385 |
T |
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