View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2811_1D_low_54 (Length: 201)

Name: NF2811_1D_low_54
Description: NF2811_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2811_1D_low_54
NF2811_1D_low_54
[»] chr6 (42 HSPs)
chr6 (2-195)||(16967389-16967582)
chr6 (2-120)||(4338070-4338196)
chr6 (2-49)||(4102597-4102644)
chr6 (1-50)||(15008267-15008316)
chr6 (1-60)||(4338180-4338240)
chr6 (2-50)||(15008224-15008272)
chr6 (2-50)||(24736800-24736848)
chr6 (2-50)||(33345560-33345608)
chr6 (2-49)||(878161-878208)
chr6 (2-49)||(30909224-30909271)
chr6 (2-50)||(878018-878066)
chr6 (2-50)||(4102639-4102687)
chr6 (7-50)||(30909186-30909229)
chr6 (3-49)||(7765046-7765092)
chr6 (2-50)||(18611798-18611846)
chr6 (63-122)||(18612351-18612411)
chr6 (15-50)||(7371060-7371095)
chr6 (15-50)||(22857639-22857674)
chr6 (15-50)||(30387162-30387197)
chr6 (16-50)||(7765185-7765219)
chr6 (16-50)||(16967577-16967611)
chr6 (16-50)||(18611945-18611979)
chr6 (15-49)||(21384952-21384986)
chr6 (2-48)||(22031715-22031761)
chr6 (16-50)||(25119152-25119186)
chr6 (16-50)||(30909371-30909405)
chr6 (18-50)||(18611771-18611803)
chr6 (18-50)||(29157777-29157809)
chr6 (15-50)||(20522810-20522845)
chr6 (16-50)||(15008091-15008125)
chr6 (16-50)||(21384835-21384869)
chr6 (15-49)||(25119433-25119467)
chr6 (16-50)||(27079748-27079782)
chr6 (75-121)||(32557172-32557218)
chr6 (16-60)||(4102451-4102496)
chr6 (14-50)||(10698739-10698776)
chr6 (16-49)||(11140303-11140336)
chr6 (16-49)||(22031757-22031790)
chr6 (2-35)||(29157804-29157837)
chr6 (2-50)||(7765002-7765050)
chr6 (14-50)||(10588915-10588951)
chr6 (15-43)||(11140425-11140453)
[»] chr2 (54 HSPs)
chr2 (2-124)||(39548460-39548583)
chr2 (2-125)||(13081217-13081341)
chr2 (1-120)||(16141319-16141439)
chr2 (64-122)||(37072713-37072771)
chr2 (1-60)||(4578778-4578837)
chr2 (1-50)||(43823315-43823364)
chr2 (1-49)||(36636306-36636354)
chr2 (2-50)||(41345492-41345540)
chr2 (2-49)||(25193626-25193673)
chr2 (2-49)||(25193757-25193804)
chr2 (2-49)||(28056032-28056079)
chr2 (2-60)||(4578908-4578966)
chr2 (2-44)||(28055994-28056036)
chr2 (2-50)||(2264289-2264337)
chr2 (2-50)||(14550652-14550700)
chr2 (2-50)||(18297405-18297453)
chr2 (2-50)||(41345449-41345497)
chr2 (15-50)||(1095330-1095365)
chr2 (63-122)||(24023949-24024008)
chr2 (15-50)||(30777488-30777523)
chr2 (15-50)||(31711557-31711592)
chr2 (2-48)||(3928241-3928287)
chr2 (16-50)||(20710418-20710452)
chr2 (16-50)||(20710551-20710585)
chr2 (15-49)||(42364539-42364573)
chr2 (64-121)||(43823865-43823923)
chr2 (2-48)||(44341866-44341912)
chr2 (1-50)||(16141433-16141482)
chr2 (2-50)||(2264420-2264468)
chr2 (3-35)||(4281211-4281243)
chr2 (2-37)||(4579059-4579094)
chr2 (14-49)||(16111559-16111594)
chr2 (15-50)||(19246709-19246744)
chr2 (15-50)||(20661557-20661592)
chr2 (15-50)||(31783840-31783875)
chr2 (15-50)||(34726758-34726793)
chr2 (15-50)||(35126655-35126690)
chr2 (15-50)||(37867201-37867236)
chr2 (16-50)||(4281062-4281096)
chr2 (16-50)||(12449100-12449134)
chr2 (15-49)||(12449206-12449240)
chr2 (15-49)||(20193990-20194024)
chr2 (16-50)||(30777341-30777375)
chr2 (16-50)||(31711663-31711697)
chr2 (16-50)||(36636172-36636206)
chr2 (16-50)||(41345316-41345350)
chr2 (16-50)||(42364657-42364691)
chr2 (16-49)||(3926160-3926193)
chr2 (16-49)||(3928212-3928245)
chr2 (16-49)||(16111668-16111701)
chr2 (63-123)||(25996078-25996139)
chr2 (63-116)||(28478241-28478293)
chr2 (16-49)||(44341908-44341941)
chr2 (18-50)||(4281239-4281271)
[»] chr7 (54 HSPs)
chr7 (2-122)||(32089942-32090063)
chr7 (14-122)||(34876269-34876378)
chr7 (2-50)||(32090058-32090106)
chr7 (2-50)||(48830233-48830281)
chr7 (2-50)||(15974090-15974138)
chr7 (2-50)||(25779350-25779398)
chr7 (2-50)||(27334946-27334994)
chr7 (2-50)||(39007196-39007244)
chr7 (63-122)||(45402176-45402235)
chr7 (2-50)||(24360399-24360447)
chr7 (2-50)||(48306119-48306167)
chr7 (2-50)||(48830190-48830238)
chr7 (63-122)||(5758299-5758359)
chr7 (63-119)||(16932592-16932648)
chr7 (63-119)||(16937975-16938031)
chr7 (63-123)||(27334666-27334726)
chr7 (14-50)||(34876226-34876262)
chr7 (2-50)||(46572804-46572852)
chr7 (15-50)||(5728727-5728762)
chr7 (63-122)||(39006822-39006881)
chr7 (2-60)||(46346112-46346171)
chr7 (16-50)||(6846625-6846659)
chr7 (16-50)||(24360546-24360580)
chr7 (16-50)||(30430542-30430576)
chr7 (16-50)||(32604767-32604801)
chr7 (16-50)||(38837586-38837620)
chr7 (16-50)||(39007239-39007273)
chr7 (16-50)||(41065814-41065848)
chr7 (16-50)||(44426763-44426797)
chr7 (16-50)||(46004387-46004421)
chr7 (16-61)||(46346154-46346200)
chr7 (16-49)||(6620762-6620795)
chr7 (16-49)||(31365434-31365467)
chr7 (2-50)||(48691816-48691864)
chr7 (15-50)||(31192518-31192553)
chr7 (15-50)||(41065931-41065966)
chr7 (15-50)||(43742296-43742331)
chr7 (81-124)||(44140048-44140091)
chr7 (3-50)||(44140477-44140524)
chr7 (15-50)||(44426645-44426680)
chr7 (15-61)||(45478361-45478408)
chr7 (16-50)||(5728844-5728878)
chr7 (16-50)||(7843565-7843599)
chr7 (16-50)||(25779497-25779531)
chr7 (16-50)||(32091312-32091346)
chr7 (15-49)||(34227839-34227873)
chr7 (16-50)||(48830380-48830414)
chr7 (16-49)||(30430409-30430442)
chr7 (74-122)||(43742244-43742293)
chr7 (18-50)||(5757947-5757979)
chr7 (15-43)||(7843688-7843716)
chr7 (75-119)||(21405349-21405393)
chr7 (18-50)||(32091181-32091213)
chr7 (14-50)||(38837691-38837727)
[»] chr1 (73 HSPs)
chr1 (2-122)||(31528901-31529022)
chr1 (2-117)||(51800959-51801075)
chr1 (2-116)||(2741542-2741657)
chr1 (2-126)||(28322502-28322634)
chr1 (2-124)||(44261112-44261242)
chr1 (3-120)||(19216592-19216717)
chr1 (2-122)||(30788813-30788941)
chr1 (2-122)||(33097845-33097965)
chr1 (1-50)||(10497886-10497935)
chr1 (2-50)||(23921299-23921347)
chr1 (2-50)||(31084035-31084083)
chr1 (2-50)||(23174632-23174680)
chr1 (2-50)||(35197575-35197623)
chr1 (2-119)||(51420934-51421042)
chr1 (2-49)||(180621-180668)
chr1 (4-50)||(23277328-23277374)
chr1 (2-50)||(16116459-16116507)
chr1 (2-50)||(16116502-16116550)
chr1 (2-50)||(20506670-20506718)
chr1 (2-50)||(23174763-23174811)
chr1 (2-50)||(31083992-31084040)
chr1 (2-50)||(37642752-37642800)
chr1 (2-50)||(44687843-44687891)
chr1 (7-50)||(21256201-21256244)
chr1 (2-60)||(51420891-51420950)
chr1 (2-46)||(11422346-11422390)
chr1 (2-50)||(23921342-23921390)
chr1 (15-50)||(11354473-11354508)
chr1 (15-50)||(12070572-12070607)
chr1 (15-50)||(14229323-14229358)
chr1 (15-50)||(18952548-18952583)
chr1 (63-118)||(20481520-20481575)
chr1 (15-50)||(32595151-32595186)
chr1 (16-50)||(2741513-2741547)
chr1 (16-50)||(14390008-14390042)
chr1 (16-50)||(17893118-17893152)
chr1 (16-50)||(23319257-23319291)
chr1 (16-50)||(23921167-23921201)
chr1 (16-50)||(24368580-24368614)
chr1 (16-50)||(28322629-28322663)
chr1 (15-49)||(29945264-29945298)
chr1 (16-50)||(37642898-37642932)
chr1 (16-50)||(45849154-45849188)
chr1 (16-49)||(18057444-18057477)
chr1 (16-49)||(30788784-30788817)
chr1 (2-50)||(180481-180529)
chr1 (18-50)||(18928828-18928860)
chr1 (14-50)||(31763821-31763857)
chr1 (63-123)||(37643120-37643180)
chr1 (15-50)||(14389891-14389926)
chr1 (19-50)||(21256069-21256100)
chr1 (15-50)||(47693828-47693863)
chr1 (20-50)||(9628561-9628591)
chr1 (15-49)||(12796476-12796510)
chr1 (16-50)||(12796593-12796627)
chr1 (16-50)||(17811247-17811281)
chr1 (16-50)||(18057577-18057611)
chr1 (16-50)||(18952453-18952487)
chr1 (16-50)||(20506538-20506572)
chr1 (16-50)||(31529017-31529051)
chr1 (16-50)||(33097816-33097850)
chr1 (20-50)||(33157043-33157073)
chr1 (16-50)||(33157144-33157178)
chr1 (16-50)||(35197442-35197476)
chr1 (16-50)||(51420862-51420896)
chr1 (2-50)||(10497846-10497892)
chr1 (16-49)||(15588635-15588668)
chr1 (16-49)||(16116649-16116682)
chr1 (2-39)||(21256245-21256282)
chr1 (17-46)||(23277195-23277224)
chr1 (21-50)||(35754737-35754766)
chr1 (63-122)||(16117036-16117096)
chr1 (18-50)||(35197618-35197650)
[»] chr3 (50 HSPs)
chr3 (2-123)||(53595510-53595632)
chr3 (2-50)||(23755908-23755956)
chr3 (2-50)||(34562763-34562811)
chr3 (2-122)||(39194449-39194578)
chr3 (2-50)||(28299531-28299579)
chr3 (2-50)||(31852948-31852996)
chr3 (2-50)||(52986723-52986771)
chr3 (2-60)||(28299477-28299536)
chr3 (63-123)||(9639844-9639904)
chr3 (2-50)||(53595467-53595515)
chr3 (2-50)||(19384611-19384658)
chr3 (63-122)||(23700091-23700151)
chr3 (63-122)||(23718546-23718606)
chr3 (63-122)||(23737002-23737062)
chr3 (2-50)||(41191772-41191820)
chr3 (2-50)||(41191815-41191863)
chr3 (2-50)||(50754827-50754875)
chr3 (2-50)||(50754958-50755006)
chr3 (2-50)||(51361743-51361791)
chr3 (2-50)||(52986854-52986902)
chr3 (16-50)||(19012526-19012560)
chr3 (16-50)||(36185772-36185806)
chr3 (16-50)||(53595438-53595472)
chr3 (16-49)||(9183787-9183820)
chr3 (17-50)||(51681441-51681474)
chr3 (18-50)||(23755881-23755913)
chr3 (63-122)||(23756286-23756346)
chr3 (15-50)||(16653543-16653578)
chr3 (15-50)||(19012438-19012473)
chr3 (15-50)||(27446175-27446210)
chr3 (15-50)||(36185867-36185902)
chr3 (87-122)||(53043234-53043269)
chr3 (16-50)||(8718895-8718929)
chr3 (16-50)||(9070782-9070816)
chr3 (20-50)||(16276921-16276951)
chr3 (16-50)||(21175232-21175266)
chr3 (16-50)||(23699871-23699905)
chr3 (16-50)||(23718326-23718360)
chr3 (16-50)||(23736782-23736816)
chr3 (16-50)||(23756055-23756089)
chr3 (16-50)||(28299574-28299608)
chr3 (20-50)||(35221594-35221624)
chr3 (16-50)||(39194573-39194607)
chr3 (16-50)||(47225812-47225846)
chr3 (16-50)||(47728951-47728985)
chr3 (16-49)||(34562629-34562662)
chr3 (14-50)||(8036951-8036987)
chr3 (65-124)||(8719128-8719188)
chr3 (65-124)||(9071015-9071075)
chr3 (74-122)||(37318950-37318998)
[»] chr8 (50 HSPs)
chr8 (2-122)||(30652432-30652552)
chr8 (16-122)||(28698031-28698138)
chr8 (1-123)||(12356117-12356247)
chr8 (18-122)||(40246534-40246646)
chr8 (20-122)||(2523555-2523665)
chr8 (1-50)||(40022750-40022799)
chr8 (2-50)||(34647533-34647581)
chr8 (2-50)||(7058951-7058999)
chr8 (2-50)||(9852869-9852917)
chr8 (2-60)||(13526189-13526248)
chr8 (2-60)||(13615724-13615783)
chr8 (2-50)||(1209564-1209612)
chr8 (2-50)||(1672207-1672255)
chr8 (2-50)||(9852826-9852874)
chr8 (2-50)||(30652389-30652437)
chr8 (2-50)||(35301991-35302039)
chr8 (2-50)||(4835894-4835942)
chr8 (2-50)||(4841339-4841387)
chr8 (2-50)||(23397081-23397129)
chr8 (15-50)||(185928-185963)
chr8 (15-50)||(10586023-10586058)
chr8 (15-50)||(17656665-17656700)
chr8 (16-50)||(17656782-17656816)
chr8 (2-48)||(18026959-18027005)
chr8 (16-50)||(23397224-23397258)
chr8 (16-50)||(39022625-39022659)
chr8 (2-43)||(42434209-42434250)
chr8 (18-50)||(1672180-1672212)
chr8 (17-49)||(13526244-13526276)
chr8 (17-49)||(13615779-13615811)
chr8 (2-50)||(34647576-34647624)
chr8 (15-50)||(1773251-1773286)
chr8 (2-49)||(23397038-23397085)
chr8 (15-50)||(27506868-27506903)
chr8 (15-50)||(32644209-32644244)
chr8 (20-50)||(2541045-2541075)
chr8 (15-45)||(2541156-2541186)
chr8 (16-50)||(10585906-10585940)
chr8 (16-50)||(15809804-15809838)
chr8 (15-49)||(23504656-23504690)
chr8 (16-50)||(35301858-35301892)
chr8 (20-50)||(40022617-40022647)
chr8 (2-39)||(4835762-4835799)
chr8 (2-39)||(4841207-4841244)
chr8 (76-124)||(10586063-10586112)
chr8 (16-49)||(18022606-18022639)
chr8 (16-49)||(18026930-18026963)
chr8 (16-49)||(18161453-18161486)
chr8 (16-49)||(45409453-45409486)
chr8 (74-118)||(32644046-32644090)
[»] chr5 (40 HSPs)
chr5 (2-124)||(4675564-4675687)
chr5 (2-122)||(35915912-35916040)
chr5 (2-50)||(8949498-8949546)
chr5 (2-50)||(16668202-16668250)
chr5 (2-50)||(28069460-28069508)
chr5 (63-122)||(37857526-37857585)
chr5 (1-47)||(33868779-33868825)
chr5 (2-50)||(2826254-2826302)
chr5 (63-115)||(15912383-15912435)
chr5 (15-50)||(23155689-23155724)
chr5 (63-121)||(7183902-7183960)
chr5 (16-50)||(16552293-16552327)
chr5 (16-50)||(22830752-22830786)
chr5 (15-49)||(23155572-23155606)
chr5 (16-50)||(23334952-23334986)
chr5 (16-50)||(42512644-42512678)
chr5 (16-49)||(35662197-35662230)
chr5 (16-60)||(35915883-35915928)
chr5 (15-50)||(11660944-11660979)
chr5 (15-50)||(15059480-15059515)
chr5 (63-122)||(33869480-33869539)
chr5 (15-50)||(39086564-39086599)
chr5 (15-50)||(39166302-39166337)
chr5 (16-50)||(4675494-4675528)
chr5 (16-50)||(5630235-5630269)
chr5 (16-50)||(7286918-7286952)
chr5 (16-50)||(11660839-11660873)
chr5 (16-50)||(15059597-15059631)
chr5 (63-116)||(16667659-16667713)
chr5 (20-50)||(18464735-18464765)
chr5 (16-50)||(39086670-39086704)
chr5 (16-49)||(3340743-3340776)
chr5 (2-39)||(4675523-4675560)
chr5 (16-49)||(33857401-33857434)
chr5 (2-39)||(34329957-34329994)
chr5 (17-50)||(42746808-42746841)
chr5 (74-118)||(7286954-7286998)
chr5 (18-50)||(8949471-8949503)
chr5 (76-127)||(16552237-16552289)
chr5 (18-50)||(16668245-16668277)
[»] chr4 (76 HSPs)
chr4 (2-122)||(16299362-16299483)
chr4 (1-50)||(50644335-50644384)
chr4 (2-50)||(29826066-29826114)
chr4 (1-50)||(1728983-1729032)
chr4 (2-50)||(6385755-6385803)
chr4 (2-61)||(24687060-24687120)
chr4 (2-50)||(38010527-38010575)
chr4 (63-122)||(20581900-20581959)
chr4 (63-122)||(25573212-25573271)
chr4 (2-50)||(638760-638808)
chr4 (2-50)||(25573617-25573665)
chr4 (2-50)||(25573660-25573708)
chr4 (2-50)||(29826109-29826157)
chr4 (2-50)||(49137489-49137537)
chr4 (63-122)||(50562665-50562725)
chr4 (63-128)||(48076901-48076967)
chr4 (5-50)||(10473286-10473331)
chr4 (63-120)||(24687332-24687389)
chr4 (1-50)||(30358392-30358441)
chr4 (2-50)||(1729026-1729074)
chr4 (2-50)||(10473414-10473462)
chr4 (2-50)||(20862183-20862231)
chr4 (2-50)||(26577485-26577533)
chr4 (15-50)||(1492719-1492754)
chr4 (15-50)||(8166040-8166075)
chr4 (15-50)||(12722900-12722935)
chr4 (15-50)||(16474982-16475017)
chr4 (15-50)||(21995717-21995752)
chr4 (15-50)||(31763070-31763105)
chr4 (63-122)||(34986929-34986988)
chr4 (2-49)||(38245689-38245736)
chr4 (15-50)||(54895451-54895486)
chr4 (16-50)||(9553090-9553124)
chr4 (16-50)||(12722784-12722818)
chr4 (16-50)||(21097768-21097802)
chr4 (16-50)||(22180580-22180614)
chr4 (16-50)||(27764916-27764950)
chr4 (16-50)||(50644484-50644518)
chr4 (16-50)||(53865207-53865241)
chr4 (13-50)||(17109881-17109918)
chr4 (15-48)||(38563925-38563958)
chr4 (14-50)||(6841982-6842018)
chr4 (78-122)||(9551559-9551603)
chr4 (63-123)||(20581575-20581635)
chr4 (14-50)||(33883445-33883481)
chr4 (14-50)||(36924287-36924323)
chr4 (2-50)||(45256654-45256702)
chr4 (2-50)||(49137532-49137580)
chr4 (15-50)||(2124507-2124542)
chr4 (63-122)||(6385343-6385402)
chr4 (15-61)||(6768450-6768497)
chr4 (15-50)||(6806522-6806557)
chr4 (15-50)||(8157251-8157286)
chr4 (15-50)||(9967832-9967867)
chr4 (15-50)||(37059877-37059912)
chr4 (15-50)||(43374494-43374529)
chr4 (16-50)||(4169054-4169088)
chr4 (16-50)||(6385798-6385832)
chr4 (16-50)||(8165808-8165842)
chr4 (16-50)||(8165924-8165958)
chr4 (15-49)||(10374090-10374124)
chr4 (16-50)||(21097900-21097934)
chr4 (16-50)||(22180447-22180481)
chr4 (16-50)||(29825933-29825967)
chr4 (16-50)||(30358618-30358652)
chr4 (16-50)||(31762975-31763009)
chr4 (16-50)||(36309581-36309615)
chr4 (16-50)||(38010498-38010532)
chr4 (16-46)||(43852177-43852207)
chr4 (16-50)||(49137357-49137391)
chr4 (65-122)||(2847251-2847308)
chr4 (16-45)||(16474873-16474902)
chr4 (16-49)||(38563852-38563885)
chr4 (20-49)||(50562914-50562943)
chr4 (76-123)||(562769-562817)
chr4 (2-50)||(50644293-50644341)
[»] scaffold0338 (1 HSPs)
scaffold0338 (2-50)||(6290-6338)
[»] scaffold0238 (1 HSPs)
scaffold0238 (2-50)||(24556-24604)
[»] scaffold0006 (1 HSPs)
scaffold0006 (63-122)||(210027-210086)
[»] scaffold0012 (1 HSPs)
scaffold0012 (63-122)||(119903-119962)
[»] scaffold0154 (1 HSPs)
scaffold0154 (8-49)||(37121-37162)
[»] scaffold0717 (1 HSPs)
scaffold0717 (63-119)||(6503-6559)
[»] scaffold0194 (2 HSPs)
scaffold0194 (16-50)||(28433-28467)
scaffold0194 (16-50)||(28300-28334)
[»] scaffold0097 (2 HSPs)
scaffold0097 (16-50)||(14257-14291)
scaffold0097 (16-50)||(14390-14424)
[»] scaffold0009 (1 HSPs)
scaffold0009 (16-50)||(203288-203322)
[»] scaffold0460 (1 HSPs)
scaffold0460 (63-115)||(2321-2373)
[»] scaffold0074 (1 HSPs)
scaffold0074 (75-122)||(35759-35806)
[»] scaffold0004 (1 HSPs)
scaffold0004 (15-50)||(96046-96081)
[»] scaffold0664 (1 HSPs)
scaffold0664 (20-50)||(3122-3152)
[»] scaffold0516 (1 HSPs)
scaffold0516 (16-50)||(1212-1246)
[»] scaffold0291 (1 HSPs)
scaffold0291 (16-50)||(9556-9590)
[»] scaffold0249 (2 HSPs)
scaffold0249 (16-50)||(23590-23624)
scaffold0249 (20-50)||(23695-23725)
[»] scaffold0129 (1 HSPs)
scaffold0129 (16-50)||(19966-20000)
[»] scaffold0126 (1 HSPs)
scaffold0126 (15-49)||(37680-37714)
[»] scaffold0102 (1 HSPs)
scaffold0102 (16-50)||(15622-15656)


Alignment Details
Target: chr6 (Bit Score: 170; Significance: 2e-91; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 2 - 195
Target Start/End: Complemental strand, 16967582 - 16967389
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttcactgcaaaatacttaatgggttgggatttatgcaggatgcatagggattcc 101  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  16967582 catttccacagcaaaatggttttggagtacaactcactgaaaccatttcactgcaaaatgcttaatgggttgagatttatgcaggatgcatagggattcc 16967483  T
Q  102 ttatgcatgataaccgcacccgttgacaaccccttaagcatagaaattgtaggggcaaagtggttgagtagttttgatgctccacaacaccaaa 195  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16967482 ttatgcatgataaccgcacccgttgacaaccccctaagcacagaaattgtaggggcaaagtggttgagtagttttgatgctccacaactccaaa 16967389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 4338196 - 4338070
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccattt-cactgcaaaat-------acttaatgggttgggatttatgcaggatgcata 93  Q
    ||||||||| |||||||||||||||||| ||||||||| ||||||||| |||||||||||        | ||||||| ||| ||||||||||| ||||||    
T  4338196 catttccactgcaaaatggttttggagtccaactcacaaaaaccatttccactgcaaaatggttttggcataatgggctggaatttatgcagggtgcata 4338097  T
Q  94 gggattccttatgcatgataaccgcac 120  Q
     ||||||||||||||||||||| ||||    
T  4338096 aggattccttatgcatgataactgcac 4338070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 4102644 - 4102597
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccattt 49  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4102644 catttccacagcaaaatggttttggagtacaactcacagaaaccattt 4102597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 15008316 - 15008267
Alignment:
Q  1 tcatttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15008316 tcatttccacagcaaaatggttttggagtacaactcacataaaccatttc 15008267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 4338240 - 4338180
Alignment:
Q  1 tcatttccacagcaaaatggttttggagtacaactcacagaaaccattt-cactgcaaaat 60  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  4338240 tcatttccacagcaaaatggttttggagtccaactaacagaaaccatttccactgcaaaat 4338180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 15008272 - 15008224
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15008272 catttccacagcaaaatggttttggagtacaactcacagtaaccatttc 15008224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 24736848 - 24736800
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24736848 catttccacagcaaaatgggtttggagtacaactcacagaaaccatttc 24736800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 33345608 - 33345560
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33345608 catttccacagcaaaatgggtttggagtacaactcacagaaaccatttc 33345560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 878161 - 878208
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccattt 49  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  878161 catttccacagcaaaatgggtttggagtacaactcacagaaaccattt 878208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 30909224 - 30909271
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccattt 49  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  30909224 catttccatagcaaaatggttttggagtacaactcacagaaaccattt 30909271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 878018 - 878066
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  878018 catttccacagcaaaatgggtttggagtacaactcacaaaaaccatttc 878066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 4102687 - 4102639
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  4102687 catttccacagcaaaatggttttgaagtacaactcacataaaccatttc 4102639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 30909186 - 30909229
Alignment:
Q  7 ccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  30909186 ccacagcaaaatggttttggagtacaacacacagaaaccatttc 30909229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 7765046 - 7765092
Alignment:
Q  3 atttccacagcaaaatggttttggagtacaactcacagaaaccattt 49  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||    
T  7765046 atttccacagcaaaatgattttggagtacaactcacaaaaaccattt 7765092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 18611798 - 18611846
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||    
T  18611798 catttccacagcaaaaaaattttggagtacaactcacagaaaccatttc 18611846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 63 - 122
Target Start/End: Original strand, 18612351 - 18612411
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggatt-ccttatgcatgataaccgcaccc 122  Q
    |||||||||||||||||||| | | |||||| ||||| |||||||||||||||||||||||    
T  18612351 ttaatgggttgggatttatgtacggtgcataaggatttccttatgcatgataaccgcaccc 18612411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 7371095 - 7371060
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||    
T  7371095 aaatggttttggagtacaactcacagaaaccatttc 7371060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 22857674 - 22857639
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||    
T  22857674 aaatggttttggagtacaactcacagaaaccatttc 22857639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 30387197 - 30387162
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||    
T  30387197 aaatggttttggagtacaactcacagaaaccatttc 30387162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 7765185 - 7765219
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  7765185 aatggttttggagtacaactcacagaaaccatttc 7765219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 16967611 - 16967577
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  16967611 aatggttttggagtacaactcacagaaaccatttc 16967577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 18611945 - 18611979
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  18611945 aatggttttggagtacaactcacagaaaccatttc 18611979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 21384986 - 21384952
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccattt 49  Q
    |||||||||||||||||||||||||||||||||||    
T  21384986 aaatggttttggagtacaactcacagaaaccattt 21384952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 22031761 - 22031715
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatt 48  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||||||    
T  22031761 cattttcacagcaaaatggttttggagtccaactcacaaaaaccatt 22031715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 25119186 - 25119152
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  25119186 aatggttttggagtacaactcacagaaaccatttc 25119152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 30909371 - 30909405
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  30909371 aatggttttggagtacaactcacagaaaccatttc 30909405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 18611771 - 18611803
Alignment:
Q  18 tggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||    
T  18611771 tggttttggagtacaactcacagaaaccatttc 18611803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 29157777 - 29157809
Alignment:
Q  18 tggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||    
T  29157777 tggttttggagtacaactcacagaaaccatttc 29157809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 20522845 - 20522810
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||| ||||||||||||    
T  20522845 aaatggttttggagtacaactcatagaaaccatttc 20522810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 15008125 - 15008091
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||| |||||||||||||||||    
T  15008125 aatggttttggagtacagctcacagaaaccatttc 15008091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 21384869 - 21384835
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||| ||||||||||||||||||||||    
T  21384869 aatggttttggaatacaactcacagaaaccatttc 21384835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 25119467 - 25119433
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccattt 49  Q
    ||||||||||||||||||||| |||||||||||||    
T  25119467 aaatggttttggagtacaactgacagaaaccattt 25119433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 27079782 - 27079748
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||| ||||||    
T  27079782 aatggttttggagtacaactcacagaaatcatttc 27079748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 121
Target Start/End: Original strand, 32557172 - 32557218
Alignment:
Q  75 gatttatgcaggatgcatagggattccttatgcatgataaccgcacc 121  Q
    |||||||||||| |||||| |||| ||||||||||||||||| ||||    
T  32557172 gatttatgcagggtgcataaggataccttatgcatgataaccacacc 32557218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 4102496 - 4102451
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccattt-cactgcaaaat 60  Q
    |||||||||||||||||  ||||||||||||||| |||||||||||    
T  4102496 aatggttttggagtacagttcacagaaaccatttccactgcaaaat 4102451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 10698776 - 10698739
Alignment:
Q  14 aaaatggttttggagtac-aactcacagaaaccatttc 50  Q
    |||||||||||||||||| |||||||||||||||||||    
T  10698776 aaaatggttttggagtactaactcacagaaaccatttc 10698739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 11140336 - 11140303
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccattt 49  Q
    ||||||||||||||||||||||| ||||||||||    
T  11140336 aatggttttggagtacaactcacggaaaccattt 11140303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 22031790 - 22031757
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccattt 49  Q
    |||||||||||||| |||||||||||||||||||    
T  22031790 aatggttttggagtccaactcacagaaaccattt 22031757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 29157804 - 29157837
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaact 35  Q
    ||||||||||||||||| ||||||||||||||||    
T  29157804 catttccacagcaaaatagttttggagtacaact 29157837  T

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Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 7765002 - 7765050
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||| |||||||||||||||||||||||| ||| |||| |||| |||||    
T  7765002 cattcccacagcaaaatggttttggagtataacacacataaactatttc 7765050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 10588951 - 10588915
Alignment:
Q  14 aaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  10588951 aaaatagttttggagtacaactcacagaaactatttc 10588915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 43
Target Start/End: Complemental strand, 11140453 - 11140425
Alignment:
Q  15 aaatggttttggagtacaactcacagaaa 43  Q
    |||||||||||||||||||||||||||||    
T  11140453 aaatggttttggagtacaactcacagaaa 11140425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 7e-45; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 39548460 - 39548583
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc-actgcaaaatacttaatgggttgggatttatgcaggatgcatagggattc 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||  |||||||| ||||||||||||||| |||||| ||||||    
T  39548460 catttccacagcaaaatggttttggagtacaactcacataaaccatttccactgcaaaatggttaatgggctgggatttatgcagggtgcataaggattc 39548559  T
Q  101 cttatgcatgataaccgcacccgt 124  Q
    ||||||||||||||||||||||||    
T  39548560 cttatgcatgataaccgcacccgt 39548583  T

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Target: chr2; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 13081341 - 13081217
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccattt-cactgcaaaatacttaatgggttgggatttatgcaggatgcatagggattc 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||  |||||||  ||  |||||||| || |||||| ||||||    
T  13081341 catttccacagcaaaatggttttggagtccaactcacagaaaccatttccactgcaaaatggttaatggactgaaatttatgccgggtgcataaggattc 13081242  T
Q  101 cttatgcatgataaccgcacccgtt 125  Q
    ||||||||||||||| ||| |||||    
T  13081241 cttatgcatgataactgcatccgtt 13081217  T

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Target: chr2; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 16141439 - 16141319
Alignment:
Q  1 tcatttccacagcaaaatggttttggagtacaactcacagaaaccattt-cactgcaaaatacttaatgggttgggatttatgcaggatgcatagggatt 99  Q
    ||||||||||| ||||||| ||||||||| ||||||||||||||||||| || ||||||||  |||||||  || |||||||||||| | ||||  ||||    
T  16141439 tcatttccacaacaaaatgattttggagtccaactcacagaaaccatttccagtgcaaaatgattaatggactgtgatttatgcagggtacataaagatt 16141340  T
Q  100 ccttatgcatgataaccgcac 120  Q
    |||||||||||||||||||||    
T  16141339 ccttatgcatgataaccgcac 16141319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 37072713 - 37072771
Alignment:
Q  64 taatgggttgggatttatgcaggatgcatagggattccttatgcatgataaccgcaccc 122  Q
    ||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  37072713 taatgggctgggatttatgcagggtgcataaggattccttatgcatgataaccgcaccc 37072771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 4578837 - 4578778
Alignment:
Q  1 tcatttccacagcaaaatggttttggagtacaactcacagaaaccatttcactgcaaaat 60  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||| ||| |||||||    
T  4578837 tcatttccacagcaaaatgggtttggagtacaactcacaaaaaccattccacagcaaaat 4578778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 43823315 - 43823364
Alignment:
Q  1 tcatttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  43823315 tcatttccacaacaaaatggttttggagtacaactcacataaaccatttc 43823364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 36636354 - 36636306
Alignment:
Q  1 tcatttccacagcaaaatggttttggagtacaactcacagaaaccattt 49  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  36636354 tcatttccacagcaaaatggttttggagtacaagtcacataaaccattt 36636306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 41345540 - 41345492
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||    
T  41345540 cattcccacagcaaaatggttttggagtacaacacacagaaaccatttc 41345492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 25193626 - 25193673
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccattt 49  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  25193626 catttacacagcaaaatgggtttggagtacaactcacagaaaccattt 25193673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 25193757 - 25193804
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccattt 49  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  25193757 catttacacagcaaaatgggtttggagtacaactcacagaaaccattt 25193804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 28056079 - 28056032
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccattt 49  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  28056079 cattcccacagcaaaatggttttggagtataactcacagaaaccattt 28056032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 4578966 - 4578908
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttcactgcaaaat 60  Q
    |||||||||| |||||||| |||||||||||||||||| |||||||| ||| |||||||    
T  4578966 catttccacaacaaaatgggtttggagtacaactcacaaaaaccattccacagcaaaat 4578908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 28056036 - 28055994
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaac 44  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  28056036 cattttcacagcaaaatggttttggagtacaactcacagaaac 28055994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 2264289 - 2264337
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||| |||||| | |||||||||||||||||||||||||||||    
T  2264289 catttccacaacaaaattggtttggagtacaactcacagaaaccatttc 2264337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 14550700 - 14550652
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||| |||||||||||||||||| ||| ||||||    
T  14550700 catttccacagcaaaatgggtttggagtacaactcacataaatcatttc 14550652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 18297453 - 18297405
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||| |||||||| |||||||||||||||||| ||||||||||    
T  18297453 catttccacaacaaaatgggtttggagtacaactcacaaaaaccatttc 18297405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 41345497 - 41345449
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  41345497 catttccacatcaaaatggttttgaagtacaactcacataaaccatttc 41345449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 1095365 - 1095330
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||    
T  1095365 aaatggttttggagtacaactcacagaaaccatttc 1095330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 24024008 - 24023949
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggattccttatgcatgataaccgcaccc 122  Q
    |||||||| || |||||||||||| |||||| |||| |||||||||||||||| ||||||    
T  24024008 ttaatgggctgtgatttatgcagggtgcataaggatgccttatgcatgataactgcaccc 24023949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 30777523 - 30777488
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||    
T  30777523 aaatggttttggagtacaactcacagaaaccatttc 30777488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 31711557 - 31711592
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||    
T  31711557 aaatggttttggagtacaactcacagaaaccatttc 31711592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 3928241 - 3928287
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatt 48  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||||||    
T  3928241 cattttcacagcaaaatggttttggagtccaactcacaaaaaccatt 3928287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 20710418 - 20710452
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  20710418 aatggttttggagtacaactcacagaaaccatttc 20710452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 20710551 - 20710585
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  20710551 aatggttttggagtacaactcacagaaaccatttc 20710585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 42364539 - 42364573
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccattt 49  Q
    |||||||||||||||||||||||||||||||||||    
T  42364539 aaatggttttggagtacaactcacagaaaccattt 42364573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 43823865 - 43823923
Alignment:
Q  64 taatgggttgggatttatgcaggatgcatagggatt-ccttatgcatgataaccgcacc 121  Q
    ||||||| ||||||||||||| | |||||| ||||| ||||||||||||||||||||||    
T  43823865 taatgggctgggatttatgcacggtgcataaggatttccttatgcatgataaccgcacc 43823923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 44341912 - 44341866
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatt 48  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||||||    
T  44341912 cattttcacagcaaaatggttttggagtccaactcacaaaaaccatt 44341866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 16141482 - 16141433
Alignment:
Q  1 tcatttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||| |||||| |||| |||||||||||||||||| ||||||    
T  16141482 tcatttccacagaaaaatgatttttgagtacaactcacagaaatcatttc 16141433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 2264420 - 2264468
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||  |||||||||||||||||| ||| ||||||    
T  2264420 catttccacagcaaaatgagtttggagtacaactcacaaaaatcatttc 2264468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 4281243 - 4281211
Alignment:
Q  3 atttccacagcaaaatggttttggagtacaact 35  Q
    |||||||||||||||||||||||||||||||||    
T  4281243 atttccacagcaaaatggttttggagtacaact 4281211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 37
Target Start/End: Complemental strand, 4579094 - 4579059
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactca 37  Q
    ||||||||||||||||||| ||||||||||||||||    
T  4579094 catttccacagcaaaatgggtttggagtacaactca 4579059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 16111559 - 16111594
Alignment:
Q  14 aaaatggttttggagtacaactcacagaaaccattt 49  Q
    ||||| ||||||||||||||||||||||||||||||    
T  16111559 aaaatagttttggagtacaactcacagaaaccattt 16111594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 19246709 - 19246744
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||| |||||||||||||||||||||||||||||||    
T  19246709 aaattgttttggagtacaactcacagaaaccatttc 19246744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 20661592 - 20661557
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||| |||||||    
T  20661592 aaatggttttggagtacaactcacagaagccatttc 20661557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 31783840 - 31783875
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||| ||||||||||||||||||||||||    
T  31783840 aaatggttttgaagtacaactcacagaaaccatttc 31783875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 34726793 - 34726758
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||| ||||||||||||||||||||||||||||||    
T  34726793 aaatgattttggagtacaactcacagaaaccatttc 34726758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 35126690 - 35126655
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||| ||||||    
T  35126690 aaatggttttggagtacaactcacagaaatcatttc 35126655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 37867201 - 37867236
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||| ||||||||||||||||||||||||||||||    
T  37867201 aaatgattttggagtacaactcacagaaaccatttc 37867236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 4281096 - 4281062
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||| |||||||||||||||||||    
T  4281096 aatggttttggagtataactcacagaaaccatttc 4281062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 12449134 - 12449100
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||| ||||||||||    
T  12449134 aatggttttggagtacaactcacaaaaaccatttc 12449100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 12449240 - 12449206
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccattt 49  Q
    ||||||||||||||||||||||| |||||||||||    
T  12449240 aaatggttttggagtacaactcaaagaaaccattt 12449206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 20194024 - 20193990
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccattt 49  Q
    ||||||||||||||||||||||||||||| |||||    
T  20194024 aaatggttttggagtacaactcacagaaatcattt 20193990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 30777375 - 30777341
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||| ||||||||||    
T  30777375 aatggttttggagtacaactcacataaaccatttc 30777341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 31711663 - 31711697
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||| ||||||||||    
T  31711663 aatggttttggagtacaactcacaaaaaccatttc 31711697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 36636206 - 36636172
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||| ||||||||||    
T  36636206 aatggttttggagtacaactcacaaaaaccatttc 36636172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 41345350 - 41345316
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||| ||||||||||    
T  41345350 aatggttttggagtacaactcacataaaccatttc 41345316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 42364657 - 42364691
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||| ||||||||||||||    
T  42364657 aatggttttggagtacaactaacagaaaccatttc 42364691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 3926160 - 3926193
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccattt 49  Q
    |||||||||||||||||||||||||||| |||||    
T  3926160 aatggttttggagtacaactcacagaaatcattt 3926193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 3928212 - 3928245
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccattt 49  Q
    |||||||||||||| |||||||||||||||||||    
T  3928212 aatggttttggagtccaactcacagaaaccattt 3928245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 16111668 - 16111701
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccattt 49  Q
    |||||||||||||||||||||||| |||||||||    
T  16111668 aatggttttggagtacaactcacaaaaaccattt 16111701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 25996078 - 25996139
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggatt-ccttatgcatgataaccgcacccg 123  Q
    |||||||||||| ||||||||| | ||| || | ||| ||||||||||||||||||||||||    
T  25996078 ttaatgggttggaatttatgcacggtgcttaagaatttccttatgcatgataaccgcacccg 25996139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 28478241 - 28478293
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggattccttatgcatgataacc 116  Q
    |||||||||||| | ||||||||| ||||||  |||||||||||||||||||||    
T  28478241 ttaatgggttgg-acttatgcagggtgcataaagattccttatgcatgataacc 28478293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 44341941 - 44341908
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccattt 49  Q
    |||||||||||||| |||||||||||||||||||    
T  44341941 aatggttttggagtccaactcacagaaaccattt 44341908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 4281271 - 4281239
Alignment:
Q  18 tggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||| |||||    
T  4281271 tggttttggagtacaactcacagaaacaatttc 4281239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 6e-39; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 32090063 - 32089942
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc-actgcaaaatacttaatgggttgggatttatgcaggatgcatagggattc 100  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||  |||||||| ||||||||||||||| |||||| ||||||    
T  32090063 catttccacagcaaaatggttttggagtccaactcacagaaatcatttccactgcaaaatggttaatgggctgggatttatgcagggtgcataaggattc 32089964  T
Q  101 cttatgcatgataaccgcaccc 122  Q
    ||||||||| ||||||||||||    
T  32089963 cttatgcataataaccgcaccc 32089942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 122
Target Start/End: Original strand, 34876269 - 34876378
Alignment:
Q  14 aaaatggttttggagtacaactcacagaaaccatttc-actgcaaaatacttaatgggttgggatttatgcaggatgcatagggattccttatgcatgat 112  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||| |||||| ||||| ||||||||||||    
T  34876269 aaaatggttttggagtccaactcacagaaaccatttccactgcaaaatagttaatgggctgggaattatgcagggtgcataaggattgcttatgcatgat 34876368  T
Q  113 aaccgcaccc 122  Q
    ||||||||||    
T  34876369 aaccgcaccc 34876378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 32090106 - 32090058
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32090106 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 32090058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 48830233 - 48830281
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  48830233 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 48830281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 15974138 - 15974090
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15974138 catttccacagcaaaatggatttggagtacaactcacagaaaccatttc 15974090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 25779350 - 25779398
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25779350 cattcccacagcaaaatggttttggagtacaactcacagaaaccatttc 25779398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 27334994 - 27334946
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27334994 catttccacagcaaaatggttttggagtccaactcacagaaaccatttc 27334946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 39007244 - 39007196
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39007244 catttccacagcaaaatggttttggagtacaactcacataaaccatttc 39007196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 45402235 - 45402176
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggattccttatgcatgataaccgcaccc 122  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||||||||| ||||||    
T  45402235 ttaatgggttgggatttatgcagggtgcataaggatgccttatgcatgataactgcaccc 45402176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 24360399 - 24360447
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  24360399 cattcccacaacaaaatggttttggagtacaactcacagaaaccatttc 24360447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 48306119 - 48306167
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||    
T  48306119 catttccacaacaaaatgggtttggagtacaactcacagaaaccatttc 48306167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 48830190 - 48830238
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||    
T  48830190 cattcccacagcaaaatggttttggagtacaacacacagaaaccatttc 48830238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 63 - 122
Target Start/End: Original strand, 5758299 - 5758359
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggatt-ccttatgcatgataaccgcaccc 122  Q
    |||||||| |||||||||| || |||||||| ||||| |||||||||||||||||||||||    
T  5758299 ttaatgggctgggatttatccacgatgcataaggatttccttatgcatgataaccgcaccc 5758359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 16932592 - 16932648
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggattccttatgcatgataaccgca 119  Q
    ||||||||||| || ||||||||  |||||| |||||||||||||||||||||||||    
T  16932592 ttaatgggttgagacttatgcagagtgcataaggattccttatgcatgataaccgca 16932648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 16937975 - 16938031
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggattccttatgcatgataaccgca 119  Q
    ||||||||||| || ||||||||  |||||| |||||||||||||||||||||||||    
T  16937975 ttaatgggttgagacttatgcagagtgcataaggattccttatgcatgataaccgca 16938031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 27334726 - 27334666
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggattccttatgcatgataaccgcacccg 123  Q
    |||||||| ||||| ||||||||| |||||| | |||||||| ||||||||||||||||||    
T  27334726 ttaatgggctgggacttatgcagggtgcataagaattccttaagcatgataaccgcacccg 27334666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 34876226 - 34876262
Alignment:
Q  14 aaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||||    
T  34876226 aaaatggttttggagtacaactcacagaaaccatttc 34876262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 46572852 - 46572804
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||| |||||||| |||||||||||||||| ||||||||||||    
T  46572852 catttccacaacaaaatgggtttggagtacaactcatagaaaccatttc 46572804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 5728727 - 5728762
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||    
T  5728727 aaatggttttggagtacaactcacagaaaccatttc 5728762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 39006881 - 39006822
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggattccttatgcatgataaccgcaccc 122  Q
    |||||| | |||||| |||||||| |||||| ||||||||||||||| ||||||||||||    
T  39006881 ttaatgagctgggatctatgcagggtgcataaggattccttatgcataataaccgcaccc 39006822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 46346171 - 46346112
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccattt-cactgcaaaat 60  Q
    ||||| ||||||||||| |||||||||| |||| |||||||||||||| |||||||||||    
T  46346171 cattttcacagcaaaatagttttggagtccaacccacagaaaccatttccactgcaaaat 46346112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 6846659 - 6846625
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  6846659 aatggttttggagtacaactcacagaaaccatttc 6846625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 24360546 - 24360580
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  24360546 aatggttttggagtacaactcacagaaaccatttc 24360580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 30430542 - 30430576
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  30430542 aatggttttggagtacaactcacagaaaccatttc 30430576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 32604801 - 32604767
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  32604801 aatggttttggagtacaactcacagaaaccatttc 32604767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 38837620 - 38837586
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  38837620 aatggttttggagtacaactcacagaaaccatttc 38837586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 39007273 - 39007239
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  39007273 aatggttttggagtacaactcacagaaaccatttc 39007239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 41065848 - 41065814
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  41065848 aatggttttggagtacaactcacagaaaccatttc 41065814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 44426763 - 44426797
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  44426763 aatggttttggagtacaactcacagaaaccatttc 44426797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 46004421 - 46004387
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  46004421 aatggttttggagtacaactcacagaaaccatttc 46004387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 46346200 - 46346154
Alignment:
Q  16 aatggttttggagtacaactcacagaaacca-tttcactgcaaaata 61  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  46346200 aatggttttggagtacaactcacagaaaccattttcacagcaaaata 46346154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 6620762 - 6620795
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccattt 49  Q
    ||||||||||||||||||||||||||||||||||    
T  6620762 aatggttttggagtacaactcacagaaaccattt 6620795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 31365434 - 31365467
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccattt 49  Q
    ||||||||||||||||||||||||||||||||||    
T  31365434 aatggttttggagtacaactcacagaaaccattt 31365467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 48691816 - 48691864
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||| |||||||| | |||||||||||||||||| ||||||||||    
T  48691816 catttccatagcaaaataggtttggagtacaactcacaaaaaccatttc 48691864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 31192553 - 31192518
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||| ||||||||||||||||    
T  31192553 aaatggttttggagtacaattcacagaaaccatttc 31192518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 41065966 - 41065931
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||| |||||||||||||||||||||||||    
T  41065966 aaatggttttcgagtacaactcacagaaaccatttc 41065931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 43742296 - 43742331
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||| ||||||||||||||||||||||||||||||    
T  43742296 aaatgattttggagtacaactcacagaaaccatttc 43742331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 81 - 124
Target Start/End: Complemental strand, 44140091 - 44140048
Alignment:
Q  81 tgcaggatgcatagggattccttatgcatgataaccgcacccgt 124  Q
    |||||| |||||| |||||||||||||||||||||| |||||||    
T  44140091 tgcagggtgcataaggattccttatgcatgataaccacacccgt 44140048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 44140524 - 44140477
Alignment:
Q  3 atttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||| || |||| | ||||||||||    
T  44140524 atttccacagcaaaatggttttggagtccagctcatataaaccatttc 44140477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 44426645 - 44426680
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||| ||||||||||    
T  44426645 aaatggttttggagtacaactcacataaaccatttc 44426680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 45478361 - 45478408
Alignment:
Q  15 aaatggttttggagtacaactcacagaaacca-tttcactgcaaaata 61  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||    
T  45478361 aaatggttttgaagtacaactcacagaaaccattttcacagcaaaata 45478408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 5728844 - 5728878
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||| ||||||||||||||||||||||    
T  5728844 aatggttttggaatacaactcacagaaaccatttc 5728878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 7843599 - 7843565
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||| ||||||||||    
T  7843599 aatggttttggagtacaactcacataaaccatttc 7843565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 25779497 - 25779531
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||| ||||||||||||    
T  25779497 aatggttttggagtacaactcatagaaaccatttc 25779531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 32091312 - 32091346
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||| |||||    
T  32091312 aatggttttggagtacaactcacagaaactatttc 32091346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 34227873 - 34227839
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccattt 49  Q
    ||||||||||||||||||||||||| |||||||||    
T  34227873 aaatggttttggagtacaactcacacaaaccattt 34227839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 48830380 - 48830414
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||| |||||    
T  48830380 aatggttttggagtacaactcacagaaactatttc 48830414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 30430409 - 30430442
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccattt 49  Q
    |||||||||||||||||||||||| |||||||||    
T  30430409 aatggttttggagtacaactcacataaaccattt 30430442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 43742293 - 43742244
Alignment:
Q  74 ggatttatgcaggatgcataggga-ttccttatgcatgataaccgcaccc 122  Q
    |||||||||||||||||||| ||| |||||||||||  ||||||||||||    
T  43742293 ggatttatgcaggatgcataaggatttccttatgcaccataaccgcaccc 43742244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 5757947 - 5757979
Alignment:
Q  18 tggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||| |||||||||||||||||||    
T  5757947 tggttttggagtataactcacagaaaccatttc 5757979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 43
Target Start/End: Complemental strand, 7843716 - 7843688
Alignment:
Q  15 aaatggttttggagtacaactcacagaaa 43  Q
    |||||||||||||||||||||||||||||    
T  7843716 aaatggttttggagtacaactcacagaaa 7843688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 21405393 - 21405349
Alignment:
Q  75 gatttatgcaggatgcatagggattccttatgcatgataaccgca 119  Q
    |||||||||||| |||||| |||| ||| ||||||||||||||||    
T  21405393 gatttatgcagggtgcataaggatgcctcatgcatgataaccgca 21405349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 32091181 - 32091213
Alignment:
Q  18 tggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||| ||||||    
T  32091181 tggttttggagtacaactcacagaaatcatttc 32091213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 38837727 - 38837691
Alignment:
Q  14 aaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||| || ||||||||||||||||    
T  38837727 aaaatggttttggagtataattcacagaaaccatttc 38837691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 31529022 - 31528901
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc-actgcaaaatacttaatgggttgggatttatgcaggatgcatagggattc 100  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||  |||||||| || |||||||||||| |||||| ||||||    
T  31529022 catttccacagaaaaatggttttggagtccaactcacagaaaccatttccactgcaaaatggttaatgggctgagatttatgcagggtgcataaggattc 31528923  T
Q  101 cttatgcatgataaccgcaccc 122  Q
     |||||||||||||||||||||    
T  31528922 tttatgcatgataaccgcaccc 31528901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 51801075 - 51800959
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccattt-cactgcaaaatacttaatgggttgggatttatgcaggatgcatagggattc 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||  |||||||| | ||||||||||||| |||||| ||||||    
T  51801075 catttccacagcaaaatggttttggagtccaactcacagaaaccatttccactgcaaaatggttaatgggctaggatttatgcagggtgcataaggattc 51800976  T
Q  101 cttatgcatgataaccg 117  Q
     ||||||||||||||||    
T  51800975 attatgcatgataaccg 51800959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 2741542 - 2741657
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccattt-cactgcaaaatacttaatgggttgggatttatgcaggatgcatagggattc 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||  |||||||| ||||||||||||||| |||||| ||||||    
T  2741542 catttccacagcaaaatgggtttggagtacaactcacagaaaccatttccactacaaaatggttaatgggctgggatttatgcagggtgcataaggattc 2741641  T
Q  101 cttatgcatgataacc 116  Q
     |||||||||||||||    
T  2741642 tttatgcatgataacc 2741657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 28322634 - 28322502
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccattt-cactgcaaaat-------acttaatgggttgggatttatgcaggatgcata 93  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||        | ||||||| | ||||||||| ||| ||||||    
T  28322634 catttccacagcaaaatggttttggagtccaactcacagaaaccatttccactgcaaaatggttttggcataatgggctaggatttatgtagggtgcata 28322535  T
Q  94 gggattccttatgcatgataaccgcacccgttg 126  Q
    ||||||| |||||||||||||||||||||||||    
T  28322534 gggattcgttatgcatgataaccgcacccgttg 28322502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 44261112 - 44261242
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc-actgcaaaatactt-------aatgggttgggatttatgcaggatgcata 93  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||  ||       |||| | ||||||||||||||| ||||||    
T  44261112 catttccacaacaaaatggttttggagtccaactcacagaaaccatttccactgcaaaatggttttggcataatgagctgggatttatgcagggtgcata 44261211  T
Q  94 gggattccttatgcatgataaccgcacccgt 124  Q
     ||||||||||||||||||||||||||||||    
T  44261212 aggattccttatgcatgataaccgcacccgt 44261242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 19216592 - 19216717
Alignment:
Q  3 atttccacagcaaaatggttttggagtacaactcacagaaaccattt-cactgcaaaat-------acttaatgggttgggatttatgcaggatgcatag 94  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||        | ||||||| ||||| ||||||||| ||||||     
T  19216592 atttccacagcaaaatggttttggagtccaactcacagaaaccatttccactgcaaaatggttttggcataatgggctgggacttatgcagggtgcataa 19216691  T
Q  95 ggattccttatgcatgataaccgcac 120  Q
    ||||||||||||||||||||||||||    
T  19216692 ggattccttatgcatgataaccgcac 19216717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 30788813 - 30788941
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccattt-cactgcaaaatactt-------aatgggttgggatttatgcaggatgcata 93  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||||  ||       |||||| ||||||||||||||||| ||||    
T  30788813 cattttcacagcaaaatggttttggagtccaactcacaaaaaccattttcactgcaaaatggttttagcataatgggctgggatttatgcaggatacata 30788912  T
Q  94 gggattccttatgcatgataaccgcaccc 122  Q
     ||||||||||||||||||||||||||||    
T  30788913 aggattccttatgcatgataaccgcaccc 30788941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 33097845 - 33097965
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc-actgcaaaatacttaatgggttgggatttatgcaggatgcatagggattc 100  Q
    |||||||||||||||||| |||||||||  |||||||| |||||||||| ||| |||| |  |||||||||||||||||||||||| |||||| ||||||    
T  33097845 catttccacagcaaaatgattttggagtcaaactcacataaaccatttccactacaaa-tggttaatgggttgggatttatgcagggtgcataaggattc 33097943  T
Q  101 cttatgcatgataaccgcaccc 122  Q
    |||| ||||||||||| |||||    
T  33097944 cttaagcatgataaccacaccc 33097965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 10497886 - 10497935
Alignment:
Q  1 tcatttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10497886 tcatttccacagcaaaatggttttggagtacaactcacagaaaccatttc 10497935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 23921347 - 23921299
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23921347 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 23921299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 31084035 - 31084083
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31084035 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 31084083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 23174680 - 23174632
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23174680 catttccacagcaaaatgggtttggagtacaactcacagaaaccatttc 23174632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 35197623 - 35197575
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  35197623 catttccacagcaaaatggttttggactacaactcacagaaaccatttc 35197575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 51420934 - 51421042
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttcactgcaaaatacttaatgggttgggatttatgcaggatgcatagggattcc 101  Q
    ||||||||| |||||||||||||||||| ||||||||||||| |||||    |||       |||||||||| |||||||||||| ||||||  ||||||    
T  51420934 catttccactgcaaaatggttttggagtccaactcacagaaaacattttg--gca-------taatgggttgagatttatgcagggtgcataaagattcc 51421024  T
Q  102 ttatgcatgataaccgca 119  Q
    ||||||||||||||||||    
T  51421025 ttatgcatgataaccgca 51421042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 180621 - 180668
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccattt 49  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  180621 catttccacagcaaaatgggtttggagtacaactcacagaaaccattt 180668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 23277374 - 23277328
Alignment:
Q  4 tttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  23277374 tttccacaacaaaatggttttggagtacaactcacagaaaccatttc 23277328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 16116459 - 16116507
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||    
T  16116459 catttccaaagcataatggttttggagtacaactcacagaaaccatttc 16116507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 16116502 - 16116550
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  16116502 catttccacaacaaaatgattttggagtacaactcacagaaaccatttc 16116550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 20506718 - 20506670
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  20506718 catttccacaacaaaatggttttggagtacaactcacataaaccatttc 20506670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 23174811 - 23174763
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||    
T  23174811 catttccacaacaaaatgggtttggagtacaactcacagaaaccatttc 23174763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 31083992 - 31084040
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||    
T  31083992 cattcccacagcaaaatggttttggagtacaacacacagaaaccatttc 31084040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 37642752 - 37642800
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||    
T  37642752 catttccacgacaaaatggttttggagtacaactcacagaaaccatttc 37642800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 44687891 - 44687843
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  44687891 catttccacaacaaaatggttttggagtccaactcacagaaaccatttc 44687843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 21256244 - 21256201
Alignment:
Q  7 ccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  21256244 ccacaacaaaatggttttggagtacaactcacagaaaccatttc 21256201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 51420891 - 51420950
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccattt-cactgcaaaat 60  Q
    |||||||||||||||||| |||||||||  |||||||||||||||||| |||||||||||    
T  51420891 catttccacagcaaaatgattttggagtcaaactcacagaaaccatttccactgcaaaat 51420950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 11422346 - 11422390
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaacca 46  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||    
T  11422346 catttccacagcaaaatgggtttggagtacaactcacacaaacca 11422390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 23921390 - 23921342
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||| ||||||||||||||||||| ||||||||||||| ||||||||||    
T  23921390 cattcccacagcaaaatggttttgaagtacaactcacaaaaaccatttc 23921342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 11354508 - 11354473
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||    
T  11354508 aaatggttttggagtacaactcacagaaaccatttc 11354473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 12070607 - 12070572
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||    
T  12070607 aaatggttttggagtacaactcacagaaaccatttc 12070572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 14229358 - 14229323
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||    
T  14229358 aaatggttttggagtacaactcacagaaaccatttc 14229323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 18952583 - 18952548
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||    
T  18952583 aaatggttttggagtacaactcacagaaaccatttc 18952548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 20481520 - 20481575
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggattccttatgcatgataaccgc 118  Q
    |||||||||||||||||||||||| ||||||  ||| |||||| ||||||||||||    
T  20481520 ttaatgggttgggatttatgcagggtgcataatgatgccttattcatgataaccgc 20481575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 32595151 - 32595186
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||    
T  32595151 aaatggttttggagtacaactcacagaaaccatttc 32595186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 2741513 - 2741547
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  2741513 aatggttttggagtacaactcacagaaaccatttc 2741547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 14390008 - 14390042
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  14390008 aatggttttggagtacaactcacagaaaccatttc 14390042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 17893152 - 17893118
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  17893152 aatggttttggagtacaactcacagaaaccatttc 17893118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 23319291 - 23319257
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  23319291 aatggttttggagtacaactcacagaaaccatttc 23319257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 23921201 - 23921167
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  23921201 aatggttttggagtacaactcacagaaaccatttc 23921167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 24368580 - 24368614
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  24368580 aatggttttggagtacaactcacagaaaccatttc 24368614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 28322663 - 28322629
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  28322663 aatggttttggagtacaactcacagaaaccatttc 28322629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 29945264 - 29945298
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccattt 49  Q
    |||||||||||||||||||||||||||||||||||    
T  29945264 aaatggttttggagtacaactcacagaaaccattt 29945298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 37642898 - 37642932
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  37642898 aatggttttggagtacaactcacagaaaccatttc 37642932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 45849188 - 45849154
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  45849188 aatggttttggagtacaactcacagaaaccatttc 45849154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 18057444 - 18057477
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccattt 49  Q
    ||||||||||||||||||||||||||||||||||    
T  18057444 aatggttttggagtacaactcacagaaaccattt 18057477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 30788784 - 30788817
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccattt 49  Q
    ||||||||||||||||||||||||||||||||||    
T  30788784 aatggttttggagtacaactcacagaaaccattt 30788817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 180481 - 180529
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||| ||||||| |||||||||||||||| |||||| |||||    
T  180481 catttccacagtaaaatgggtttggagtacaactcatagaaacaatttc 180529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 18928828 - 18928860
Alignment:
Q  18 tggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||    
T  18928828 tggttttggagtacaactcacagaaaccatttc 18928860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 31763821 - 31763857
Alignment:
Q  14 aaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||| ||||||||||    
T  31763821 aaaatggttttggagtacaactcacaaaaaccatttc 31763857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 37643120 - 37643180
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggattccttatgcatgataaccgcacccg 123  Q
    |||||| | |||||| |||||| | ||||||  ||||||||||||||||||||||||||||    
T  37643120 ttaatgagctgggatgtatgcacggtgcataaagattccttatgcatgataaccgcacccg 37643180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 14389891 - 14389926
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||| |||||||||||||||||||    
T  14389891 aaatggttttggagtataactcacagaaaccatttc 14389926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 50
Target Start/End: Complemental strand, 21256100 - 21256069
Alignment:
Q  19 ggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||    
T  21256100 ggttttggagtacaactcacagaaaccatttc 21256069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 47693863 - 47693828
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||| ||||||||||    
T  47693863 aaatggttttggagtacaactcacacaaaccatttc 47693828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 50
Target Start/End: Complemental strand, 9628591 - 9628561
Alignment:
Q  20 gttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||    
T  9628591 gttttggagtacaactcacagaaaccatttc 9628561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 12796476 - 12796510
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccattt 49  Q
    |||||||||||||||||||||||||||||| ||||    
T  12796476 aaatggttttggagtacaactcacagaaactattt 12796510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 12796593 - 12796627
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||| |||||||||||||||||||||||||    
T  12796593 aatggttttagagtacaactcacagaaaccatttc 12796627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 17811247 - 17811281
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||| ||||||||||||    
T  17811247 aatggttttggagtacaactcatagaaaccatttc 17811281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 18057577 - 18057611
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||| ||||||||||||||||||||||||||||||    
T  18057577 aatgattttggagtacaactcacagaaaccatttc 18057611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 18952487 - 18952453
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||| ||||||||||    
T  18952487 aatggttttggagtacaactcacataaaccatttc 18952453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 20506572 - 20506538
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||| ||||||||||    
T  20506572 aatggttttggagtacaactcacataaaccatttc 20506538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 31529051 - 31529017
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||| ||||||||||    
T  31529051 aatggttttggagtacaactcacataaaccatttc 31529017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 33097816 - 33097850
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||| ||||||||||||||||||||    
T  33097816 aatggttttggagtccaactcacagaaaccatttc 33097850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 50
Target Start/End: Original strand, 33157043 - 33157073
Alignment:
Q  20 gttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||    
T  33157043 gttttggagtacaactcacagaaaccatttc 33157073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 33157144 - 33157178
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||| |||||||||||||||||||||||||    
T  33157144 aatggttttagagtacaactcacagaaaccatttc 33157178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 35197476 - 35197442
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||| ||||||||||||||||||||||||||||||    
T  35197476 aatgattttggagtacaactcacagaaaccatttc 35197442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 51420862 - 51420896
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||| ||||||||||||||||||||    
T  51420862 aatggttttggagtgcaactcacagaaaccatttc 51420896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 10497846 - 10497892
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||| |||||||||||||||||||||||||||  |||||||| ||||||    
T  10497846 cattcccacagcaaaatggttttggagtacaa--cacagaaatcatttc 10497892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 15588635 - 15588668
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccattt 49  Q
    |||||||||||||||||| |||||||||||||||    
T  15588635 aatggttttggagtacaagtcacagaaaccattt 15588668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 16116649 - 16116682
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccattt 49  Q
    |||| |||||||||||||||||||||||||||||    
T  16116649 aatgattttggagtacaactcacagaaaccattt 16116682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 21256282 - 21256245
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcaca 39  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  21256282 cattcccacagcaaaatggttttggagtacaacacaca 21256245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 23277224 - 23277195
Alignment:
Q  17 atggttttggagtacaactcacagaaacca 46  Q
    ||||||||||||||||||||||||||||||    
T  23277224 atggttttggagtacaactcacagaaacca 23277195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 50
Target Start/End: Original strand, 35754737 - 35754766
Alignment:
Q  21 ttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||    
T  35754737 ttttggagtacaactcacagaaaccatttc 35754766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 122
Target Start/End: Original strand, 16117036 - 16117096
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggat-tccttatgcatgataaccgcaccc 122  Q
    ||||||||  |||||||||||| ||| |||| |||  ||||||||||||||||||||||||    
T  16117036 ttaatgggcagggatttatgcacgatacataaggaaatccttatgcatgataaccgcaccc 16117096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 35197650 - 35197618
Alignment:
Q  18 tggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||| ||||||||||    
T  35197650 tggttttggagtacaactcacaaaaaccatttc 35197618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 9e-35; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 53595510 - 53595632
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc-actgcaaaatacttaatgggttgggatttatgcaggatgcatagggattc 100  Q
    |||||||||| ||||||||||||||||| ||||||||| |||||||||| ||||||||||  |||||| | ||||||||||||||| |||||| ||||||    
T  53595510 catttccacatcaaaatggttttggagtccaactcacataaaccatttccactgcaaaatggttaatgagctgggatttatgcagggtgcataaggattc 53595609  T
Q  101 cttatgcatgataaccgcacccg 123  Q
    ||||||||||||||| |||||||    
T  53595610 cttatgcatgataactgcacccg 53595632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 23755908 - 23755956
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23755908 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 23755956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 34562811 - 34562763
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34562811 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 34562763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 39194578 - 39194449
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaa-ctcacagaaaccatttc-actgcaaaatactt-------aatgggttgggatttatgcaggatgcat 92  Q
    |||||||||| ||||||||||||||||| ||| |||||||||| |||||| ||||||||||| ||       ||| || ||| |||||| ||||||||||    
T  39194578 catttccacatcaaaatggttttggagtccaaactcacagaaatcatttccactgcaaaataattttggcataataggctggaatttattcaggatgcat 39194479  T
Q  93 agggattccttatgcatgataaccgcaccc 122  Q
    | | ||||||||||||||||||||||||||    
T  39194478 aagaattccttatgcatgataaccgcaccc 39194449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 28299579 - 28299531
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28299579 catttccacaacaaaatggttttggagtacaactcacagaaaccatttc 28299531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 31852948 - 31852996
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  31852948 catttccacagcaaaatgggtttggagtacaactcacagaaaccatttc 31852996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 52986771 - 52986723
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  52986771 catttccacagcaaaatgggtttggagtacaactcacagaaaccatttc 52986723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 28299536 - 28299477
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccattt-cactgcaaaat 60  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  28299536 catttccatagcaaaatggttttggagtccaactcacagaaaccatttccactgcaaaat 28299477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 9639904 - 9639844
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggattccttatgcatgataaccgcacccg 123  Q
    |||||||| ||||||||||||||| |||||| |||| |||||||||||||||| |||||||    
T  9639904 ttaatgggctgggatttatgcagggtgcataaggatgccttatgcatgataactgcacccg 9639844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 53595467 - 53595515
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  53595467 catttccacagcaaaatggtttcggaatacaactcacagaaaccatttc 53595515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 19384658 - 19384611
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  19384658 catttccacaacaaaatggttt-ggagtacaactcacagaaaccatttc 19384611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 63 - 122
Target Start/End: Original strand, 23700091 - 23700151
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggatt-ccttatgcatgataaccgcaccc 122  Q
    |||||||| |||||||||| || |||||||| ||||| |||||||||||||||||||||||    
T  23700091 ttaatgggctgggatttatccacgatgcataaggatttccttatgcatgataaccgcaccc 23700151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 63 - 122
Target Start/End: Original strand, 23718546 - 23718606
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggatt-ccttatgcatgataaccgcaccc 122  Q
    |||||||| |||||||||| || |||||||| ||||| |||||||||||||||||||||||    
T  23718546 ttaatgggctgggatttatccacgatgcataaggatttccttatgcatgataaccgcaccc 23718606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 63 - 122
Target Start/End: Original strand, 23737002 - 23737062
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggatt-ccttatgcatgataaccgcaccc 122  Q
    |||||||| |||||||||| || |||||||| ||||| |||||||||||||||||||||||    
T  23737002 ttaatgggctgggatttatccacgatgcataaggatttccttatgcatgataaccgcaccc 23737062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 41191820 - 41191772
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||| ||||||||||||||| |||||||||||||||| |||||    
T  41191820 catttccacaacaaaatggttttggaatacaactcacagaaacaatttc 41191772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 41191863 - 41191815
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||| ||||| |||||||||||||||||||||| |||||||||||||||    
T  41191863 cattcccacatcaaaatggttttggagtacaacacacagaaaccatttc 41191815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 50754827 - 50754875
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||| |||||||| ||||||||||||||||||||||| |||||    
T  50754827 catttccacaacaaaatgggtttggagtacaactcacagaaactatttc 50754875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 50754958 - 50755006
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||| |||||||| ||||||||||||||||||||||| |||||    
T  50754958 catttccacaacaaaatgggtttggagtacaactcacagaaactatttc 50755006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 51361791 - 51361743
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||| |||||||||||||||| ||||| ||||||    
T  51361791 catttccacagcaaaatgggtttggagtacaactcagagaaatcatttc 51361743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 52986902 - 52986854
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  52986902 catttccactgcaaaatgggtttggagtacaactcatagaaaccatttc 52986854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 19012526 - 19012560
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  19012526 aatggttttggagtacaactcacagaaaccatttc 19012560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 36185806 - 36185772
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  36185806 aatggttttggagtacaactcacagaaaccatttc 36185772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 53595438 - 53595472
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  53595438 aatggttttggagtacaactcacagaaaccatttc 53595472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 9183820 - 9183787
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccattt 49  Q
    ||||||||||||||||||||||||||||||||||    
T  9183820 aatggttttggagtacaactcacagaaaccattt 9183787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 50
Target Start/End: Complemental strand, 51681474 - 51681441
Alignment:
Q  17 atggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||    
T  51681474 atggttttggagtacaactcacagaaaccatttc 51681441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 23755881 - 23755913
Alignment:
Q  18 tggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||    
T  23755881 tggttttggagtacaactcacagaaaccatttc 23755913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 122
Target Start/End: Original strand, 23756286 - 23756346
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggatt-ccttatgcatgataaccgcaccc 122  Q
    |||||||| |||||||||| || | |||||| ||||| |||||||||||||||||||||||    
T  23756286 ttaatgggctgggatttatccacggtgcataaggatttccttatgcatgataaccgcaccc 23756346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 16653543 - 16653578
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||| ||||||||||||||||||||||||    
T  16653543 aaatggttttgaagtacaactcacagaaaccatttc 16653578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 19012438 - 19012473
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||| ||||||||||||||||||||||||    
T  19012438 aaatggttttgaagtacaactcacagaaaccatttc 19012473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 27446210 - 27446175
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||| ||||||||||||||||    
T  27446210 aaatggttttggagtacaattcacagaaaccatttc 27446175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 36185902 - 36185867
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||| ||||||||||    
T  36185902 aaatggttttggagtacaactcacaaaaaccatttc 36185867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 53043234 - 53043269
Alignment:
Q  87 atgcatagggattccttatgcatgataaccgcaccc 122  Q
    ||||||| ||||||||||||||||||||||||||||    
T  53043234 atgcataaggattccttatgcatgataaccgcaccc 53043269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 8718895 - 8718929
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||| ||||||||||||||||||||||||||||||    
T  8718895 aatgattttggagtacaactcacagaaaccatttc 8718929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 9070782 - 9070816
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||| ||||||||||||||||||||||||||||||    
T  9070782 aatgattttggagtacaactcacagaaaccatttc 9070816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 50
Target Start/End: Complemental strand, 16276951 - 16276921
Alignment:
Q  20 gttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||    
T  16276951 gttttggagtacaactcacagaaaccatttc 16276921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 21175232 - 21175266
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||| |||||    
T  21175232 aatggttttggagtacaactcacagaaactatttc 21175266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 23699871 - 23699905
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||| ||||||||||||||||||||||    
T  23699871 aatggttttggaatacaactcacagaaaccatttc 23699905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 23718326 - 23718360
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||| ||||||||||||||||||||||    
T  23718326 aatggttttggaatacaactcacagaaaccatttc 23718360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 23736782 - 23736816
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||| ||||||||||||||||||||||    
T  23736782 aatggttttggaatacaactcacagaaaccatttc 23736816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 23756055 - 23756089
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||| |||||||    
T  23756055 aatggttttggagtacaactcacagaagccatttc 23756089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 28299608 - 28299574
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||| |||||||||||    
T  28299608 aatggttttggagtacaactcacggaaaccatttc 28299574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 50
Target Start/End: Complemental strand, 35221624 - 35221594
Alignment:
Q  20 gttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||    
T  35221624 gttttggagtacaactcacagaaaccatttc 35221594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 39194607 - 39194573
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||| ||||||||||    
T  39194607 aatggttttggagtacaactcacataaaccatttc 39194573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 47225812 - 47225846
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||| |||||||||||||||||||||||||    
T  47225812 aatggttttagagtacaactcacagaaaccatttc 47225846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 47728951 - 47728985
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||| ||||||||||||    
T  47728951 aatggttttggagtacaactcatagaaaccatttc 47728985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 34562662 - 34562629
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccattt 49  Q
    |||||||||||||||||||||||| |||||||||    
T  34562662 aatggttttggagtacaactcacataaaccattt 34562629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 8036987 - 8036951
Alignment:
Q  14 aaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||  |||||||||||    
T  8036987 aaaatggttttggagtacaactcaaggaaaccatttc 8036951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 124
Target Start/End: Original strand, 8719128 - 8719188
Alignment:
Q  65 aatgggttgggatttatgcaggatgcataggga-ttccttatgcatgataaccgcacccgt 124  Q
    |||||||||||||||||||| | |||||| ||| |||||||||||  |||||||| |||||    
T  8719128 aatgggttgggatttatgcacggtgcataaggatttccttatgcaccataaccgctcccgt 8719188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 124
Target Start/End: Original strand, 9071015 - 9071075
Alignment:
Q  65 aatgggttgggatttatgcaggatgcataggga-ttccttatgcatgataaccgcacccgt 124  Q
    |||||||||||||||||||| | |||||| ||| |||||||||||  |||||||| |||||    
T  9071015 aatgggttgggatttatgcacggtgcataaggatttccttatgcaccataaccgctcccgt 9071075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 37318998 - 37318950
Alignment:
Q  74 ggatttatgcaggatgcatagggattccttatgcatgataaccgcaccc 122  Q
    |||||||| |||  |||||| | ||||||||||||||||||||||||||    
T  37318998 ggatttatacagtgtgcataagaattccttatgcatgataaccgcaccc 37318950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 2e-29; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 30652432 - 30652552
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc-actgcaaaatacttaatgggttgggatttatgcaggatgcatagggattc 100  Q
    ||||||||| |||||||||||||||||| ||||||||||||| |||||| ||||||||||  |||||||| || |||||||||||| |||||| | ||||    
T  30652432 catttccac-gcaaaatggttttggagtccaactcacagaaatcatttccactgcaaaatgtttaatgggctgagatttatgcagggtgcataagaattc 30652530  T
Q  101 cttatgcatgataaccgcaccc 122  Q
    |||||||||||||||| |||||    
T  30652531 cttatgcatgataaccacaccc 30652552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 28698138 - 28698031
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc-actgcaaaatacttaatgggttgggatttatgcaggatgcatagggattccttatgcatgataa 114  Q
    |||| ||||||||| |||||||||||||||||||| ||| ||||||  ||||||||||| |||||||||| | |||||| ||||||||||||||||||||    
T  28698138 aatgattttggagtccaactcacagaaaccatttccactacaaaatggttaatgggttgtgatttatgcatggtgcataaggattccttatgcatgataa 28698039  T
Q  115 ccgcaccc 122  Q
    ||||||||    
T  28698038 ccgcaccc 28698031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 12356117 - 12356247
Alignment:
Q  1 tcatttccacagcaaaatggttttggagtacaactcacagaaacca-tttcactgcaaaat-------acttaatgggttgggatttatgcaggatgcat 92  Q
    |||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||        | ||||||| ||||||||||||||| |||||    
T  12356117 tcatttccactgcaaaatggttttggagtccaactcacagaaaccattttcactgcaaaatggttttggcataatgggctgggatttatgcagggtgcat 12356216  T
Q  93 agggattccttatgcatgataaccgcacccg 123  Q
    | |||||||||||  ||||| ||||||||||    
T  12356217 aaggattccttatttatgatgaccgcacccg 12356247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 18 - 122
Target Start/End: Complemental strand, 40246646 - 40246534
Alignment:
Q  18 tggttttggagtacaactcacagaaaccatttc-actgcaaaatactt-------aatgggttgggatttatgcaggatgcatagggattccttatgcat 109  Q
    ||||||||||||||||||||||||||||||||| ||||||||||  ||       |||||  ||||||||||||||| |||||| |||||||||||||||    
T  40246646 tggttttggagtacaactcacagaaaccatttccactgcaaaatggttttggcataatggactgggatttatgcagggtgcataaggattccttatgcat 40246547  T
Q  110 gataaccgcaccc 122  Q
    |||||||||||||    
T  40246546 gataaccgcaccc 40246534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 2523555 - 2523665
Alignment:
Q  20 gttttggagtacaactcacagaaaccatttc-actgcaaaatactt-------aatgggttgggatttatgcaggatgcatagggattccttatgcatga 111  Q
    |||||||||||||||||||| |||||||||| ||| ||||||  ||       |||||| |||||||||||||||||||||| |||||||||||||||||    
T  2523555 gttttggagtacaactcacataaaccatttccactccaaaatggttttggcataatggggtgggatttatgcaggatgcataaggattccttatgcatga 2523654  T
Q  112 taaccgcaccc 122  Q
    |||||||||||    
T  2523655 taaccgcaccc 2523665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 40022799 - 40022750
Alignment:
Q  1 tcatttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40022799 tcatttccacagcaaaatggttttggagtacaactcacagaaaccatttc 40022750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 34647581 - 34647533
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34647581 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 34647533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 7058951 - 7058999
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7058951 catttccacagcaaaatgggtttggagtacaactcacagaaaccatttc 7058999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 9852869 - 9852917
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9852869 catttccacagcaaaatgattttggagtacaactcacagaaaccatttc 9852917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 13526248 - 13526189
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccattt-cactgcaaaat 60  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  13526248 cattttcacagcaaaatggttttggagtccaactcacagaaaccatttccactgcaaaat 13526189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 13615783 - 13615724
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccattt-cactgcaaaat 60  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  13615783 cattttcacagcaaaatggttttggagtccaactcacagaaaccatttccactgcaaaat 13615724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 1209564 - 1209612
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  1209564 catttccacagcaaaatgggtttggagtacaactcacagaaatcatttc 1209612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 1672207 - 1672255
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  1672207 catttccacagcaaaatggtttttgagtacaactcagagaaaccatttc 1672255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 9852826 - 9852874
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||    
T  9852826 cattcccacagcaaaatggttttggagtacaacacacagaaaccatttc 9852874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 30652389 - 30652437
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||    
T  30652389 catttccacatcaaaatggttttggagtacaacacacagaaaccatttc 30652437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 35302039 - 35301991
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||    
T  35302039 catttccacaacaaaatagttttggagtacaactcacagaaaccatttc 35301991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 4835942 - 4835894
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  4835942 catttccacagcaaaatgagtttggagtacaactcatagaaaccatttc 4835894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 4841387 - 4841339
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  4841387 catttccacagcaaaatgagtttggagtacaactcatagaaaccatttc 4841339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 23397081 - 23397129
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||| |||||||||||||||||||| ||||||||||| ||||||||||    
T  23397081 cattttcacagcaaaatggttttggactacaactcacataaaccatttc 23397129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 185928 - 185963
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||    
T  185928 aaatggttttggagtacaactcacagaaaccatttc 185963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 10586058 - 10586023
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||    
T  10586058 aaatggttttggagtacaactcacagaaaccatttc 10586023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 17656665 - 17656700
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||    
T  17656665 aaatggttttggagtacaactcacagaaaccatttc 17656700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 17656782 - 17656816
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  17656782 aatggttttggagtacaactcacagaaaccatttc 17656816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 18026959 - 18027005
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatt 48  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||||||    
T  18026959 cattttcacagcaaaatggttttggagtccaactcacaaaaaccatt 18027005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 23397224 - 23397258
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  23397224 aatggttttggagtacaactcacagaaaccatttc 23397258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 39022625 - 39022659
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  39022625 aatggttttggagtacaactcacagaaaccatttc 39022659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 42434209 - 42434250
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaa 43  Q
    |||| ||||| |||||||||||||||||||||||||||||||    
T  42434209 cattcccacaacaaaatggttttggagtacaactcacagaaa 42434250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 1672180 - 1672212
Alignment:
Q  18 tggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||    
T  1672180 tggttttggagtacaactcacagaaaccatttc 1672212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 13526276 - 13526244
Alignment:
Q  17 atggttttggagtacaactcacagaaaccattt 49  Q
    |||||||||||||||||||||||||||||||||    
T  13526276 atggttttggagtacaactcacagaaaccattt 13526244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 13615811 - 13615779
Alignment:
Q  17 atggttttggagtacaactcacagaaaccattt 49  Q
    |||||||||||||||||||||||||||||||||    
T  13615811 atggttttggagtacaactcacagaaaccattt 13615779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 34647624 - 34647576
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||| |||||||||||||||||||||||| ||  |||||||||||||||    
T  34647624 cattcccacagcaaaatggttttggagtataatacacagaaaccatttc 34647576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 1773286 - 1773251
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||| ||||||||||    
T  1773286 aaatggttttggagtacaactcacaaaaaccatttc 1773251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 23397038 - 23397085
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccattt 49  Q
    |||| ||||| |||||||||||||||||||||| || |||||||||||    
T  23397038 cattcccacaacaaaatggttttggagtacaacacatagaaaccattt 23397085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 27506903 - 27506868
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||| |||||    
T  27506903 aaatggttttggagtacaactcacagaaactatttc 27506868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 32644244 - 32644209
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||| ||||||    
T  32644244 aaatggttttggagtacaactcacagaaatcatttc 32644209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 50
Target Start/End: Complemental strand, 2541075 - 2541045
Alignment:
Q  20 gttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||    
T  2541075 gttttggagtacaactcacagaaaccatttc 2541045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 45
Target Start/End: Complemental strand, 2541186 - 2541156
Alignment:
Q  15 aaatggttttggagtacaactcacagaaacc 45  Q
    |||||||||||||||||||||||||||||||    
T  2541186 aaatggttttggagtacaactcacagaaacc 2541156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 10585940 - 10585906
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||| ||||||||||||    
T  10585940 aatggttttggagtacaactcatagaaaccatttc 10585906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 15809804 - 15809838
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||| ||||||||||||    
T  15809804 aatggttttggagtacaactcagagaaaccatttc 15809838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 23504690 - 23504656
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccattt 49  Q
    |||||||||||||||||||||||||||| ||||||    
T  23504690 aaatggttttggagtacaactcacagaatccattt 23504656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 35301892 - 35301858
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||| ||||||||||    
T  35301892 aatggttttggagtacaactcacataaaccatttc 35301858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 50
Target Start/End: Complemental strand, 40022647 - 40022617
Alignment:
Q  20 gttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||    
T  40022647 gttttggagtacaactcacagaaaccatttc 40022617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 4835799 - 4835762
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcaca 39  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  4835799 catttccacaacaaaatgggtttggagtacaactcaca 4835762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 4841244 - 4841207
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcaca 39  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  4841244 catttccacaacaaaatgggtttggagtacaactcaca 4841207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 10586063 - 10586112
Alignment:
Q  76 atttatgcaggatgcatagggatt-ccttatgcatgataaccgcacccgt 124  Q
    ||||||||||| |||||| ||||| |||||||||| ||||||||||||||    
T  10586063 atttatgcagggtgcataaggatttccttatgcatcataaccgcacccgt 10586112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 18022606 - 18022639
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccattt 49  Q
    |||||||||||||||||||||||| |||||||||    
T  18022606 aatggttttggagtacaactcacataaaccattt 18022639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 18026930 - 18026963
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccattt 49  Q
    |||||||||||||| |||||||||||||||||||    
T  18026930 aatggttttggagtccaactcacagaaaccattt 18026963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 18161453 - 18161486
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccattt 49  Q
    |||||||||||| |||||||||||||||||||||    
T  18161453 aatggttttggaatacaactcacagaaaccattt 18161486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 45409486 - 45409453
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccattt 49  Q
    |||||||||||||||||||||| |||||||||||    
T  45409486 aatggttttggagtacaactcaaagaaaccattt 45409453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 118
Target Start/End: Complemental strand, 32644090 - 32644046
Alignment:
Q  74 ggatttatgcaggatgcatagggattccttatgcatgataaccgc 118  Q
    ||||||||||||| |||||| ||||||||||||||  ||||||||    
T  32644090 ggatttatgcagggtgcataaggattccttatgcaccataaccgc 32644046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 3e-25; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 4675564 - 4675687
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccattt-cactgcaaaatacttaatgggttgggatttatgcag-gatgcat-agggat 98  Q
    |||||||||||||||||||||||||||| |||||  || ||||||||| |||||||||||  |||||||| |||||||||||||| | ||||| | ||||    
T  4675564 catttccacagcaaaatggttttggagtccaact--caaaaaccatttccactgcaaaatggttaatgggctgggatttatgcagagctgcataaaggat 4675661  T
Q  99 tccttatgcatgataaccgcacccgt 124  Q
    | ||||||||||||||||||||||||    
T  4675662 ttcttatgcatgataaccgcacccgt 4675687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 35915912 - 35916040
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccattt-cactgcaaaatactt-------aatgggttgggatttatgcaggatgcata 93  Q
    ||||||||| ||||||||||||| |||| ||||||||| |||| |||| |||||||||||| ||       |||||| ||||||||||||||| ||||||    
T  35915912 catttccactgcaaaatggttttagagtccaactcacaaaaactattttcactgcaaaatagttttggcataatgggctgggatttatgcagggtgcata 35916011  T
Q  94 gggattccttatgcatgataaccgcaccc 122  Q
     |||||||||||||||||||||| |||||    
T  35916012 aggattccttatgcatgataaccacaccc 35916040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 8949498 - 8949546
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8949498 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 8949546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 16668250 - 16668202
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16668250 catttcctcagcaaaatggttttggagtacaactcacagaaaccatttc 16668202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 28069508 - 28069460
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28069508 catttccacagcaaaatgggtttggagtacaactcacagaaaccatttc 28069460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 63 - 122
Target Start/End: Original strand, 37857526 - 37857585
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggattccttatgcatgataaccgcaccc 122  Q
    |||||||| ||||||||||||||| |||||| |||| |||||||||||||||||||||||    
T  37857526 ttaatgggctgggatttatgcagggtgcataaggatgccttatgcatgataaccgcaccc 37857585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33868779 - 33868825
Alignment:
Q  1 tcatttccacagcaaaatggttttggagtacaactcacagaaaccat 47  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  33868779 tcatttccacagcaaaatggttttggagtacaactcacaaaaaccat 33868825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 2826302 - 2826254
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  2826302 catttccacagcaaaatggatttggagtacaactcacagaaactatttc 2826254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 15912435 - 15912383
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggattccttatgcatgataac 115  Q
    |||||||| ||||||||||||||| |||||| |||| ||||||||||||||||    
T  15912435 ttaatgggctgggatttatgcagggtgcataaggatgccttatgcatgataac 15912383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 23155689 - 23155724
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||    
T  23155689 aaatggttttggagtacaactcacagaaaccatttc 23155724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 7183902 - 7183960
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggattccttatgcatgataaccgcacc 121  Q
    |||||||| || |||||||||||| |||||| ||||  |||||||||||||||||||||    
T  7183902 ttaatgggctgagatttatgcagggtgcataaggatgtcttatgcatgataaccgcacc 7183960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 16552327 - 16552293
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  16552327 aatggttttggagtacaactcacagaaaccatttc 16552293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 22830752 - 22830786
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  22830752 aatggttttggagtacaactcacagaaaccatttc 22830786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 23155572 - 23155606
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccattt 49  Q
    |||||||||||||||||||||||||||||||||||    
T  23155572 aaatggttttggagtacaactcacagaaaccattt 23155606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 23334986 - 23334952
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  23334986 aatggttttggagtacaactcacagaaaccatttc 23334952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 42512644 - 42512678
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  42512644 aatggttttggagtacaactcacagaaaccatttc 42512678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 35662197 - 35662230
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccattt 49  Q
    ||||||||||||||||||||||||||||||||||    
T  35662197 aatggttttggagtacaactcacagaaaccattt 35662230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 35915883 - 35915928
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccattt-cactgcaaaat 60  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||    
T  35915883 aatgattttggagtacaactcacagaaaccatttccactgcaaaat 35915928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 11660979 - 11660944
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||| ||||||||||||||||||||||    
T  11660979 aaatggttttggaatacaactcacagaaaccatttc 11660944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 15059480 - 15059515
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||| |||||    
T  15059480 aaatggttttggagtacaactcacagaaactatttc 15059515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 122
Target Start/End: Original strand, 33869480 - 33869539
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggattccttatgcatgataaccgcaccc 122  Q
    ||||||| |||||||||||||||| | ||||  ||| ||||||||| |||||||||||||    
T  33869480 ttaatggattgggatttatgcagggtacataaagatgccttatgcaagataaccgcaccc 33869539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 39086564 - 39086599
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||| ||||||||||    
T  39086564 aaatggttttggagtacaactcacaaaaaccatttc 39086599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 39166337 - 39166302
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||| |||||||||||||||||||    
T  39166337 aaatggttttggagtataactcacagaaaccatttc 39166302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 4675494 - 4675528
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||| ||||||||||    
T  4675494 aatggttttggagtacaactcacataaaccatttc 4675528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 5630235 - 5630269
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||| |||||    
T  5630235 aatggttttggagtacaactcacagaaactatttc 5630269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 7286918 - 7286952
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||| ||||||||||||||||||||||||    
T  7286918 aatggttttgaagtacaactcacagaaaccatttc 7286952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 11660873 - 11660839
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||| ||||||||||    
T  11660873 aatggttttggagtacaactcacaaaaaccatttc 11660839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 15059597 - 15059631
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||| ||||||||||||||||||||||    
T  15059597 aatggttttggaatacaactcacagaaaccatttc 15059631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 16667713 - 16667659
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcataggga-ttccttatgcatgataacc 116  Q
    |||||||| ||||||||||||| | |||||| ||| |||||||||||||||||||    
T  16667713 ttaatgggctgggatttatgcacggtgcataaggatttccttatgcatgataacc 16667659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 50
Target Start/End: Complemental strand, 18464765 - 18464735
Alignment:
Q  20 gttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||    
T  18464765 gttttggagtacaactcacagaaaccatttc 18464735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 39086670 - 39086704
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||| |||||||||||||||||    
T  39086670 aatggttttggagtacagctcacagaaaccatttc 39086704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 3340743 - 3340776
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccattt 49  Q
    ||||||||||||||| ||||||||||||||||||    
T  3340743 aatggttttggagtataactcacagaaaccattt 3340776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 4675523 - 4675560
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcaca 39  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  4675523 catttccacaacaaaattgttttggagtacaactcaca 4675560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 33857434 - 33857401
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccattt 49  Q
    |||||||||||||||||||||||| |||||||||    
T  33857434 aatggttttggagtacaactcacataaaccattt 33857401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 34329957 - 34329994
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcaca 39  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  34329957 catttccacagtaaaatgggtttggagtacaactcaca 34329994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 50
Target Start/End: Original strand, 42746808 - 42746841
Alignment:
Q  17 atggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||| ||||||||||    
T  42746808 atggttttggagtacaactcacataaaccatttc 42746841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 118
Target Start/End: Original strand, 7286954 - 7286998
Alignment:
Q  74 ggatttatgcaggatgcatagggattccttatgcatgataaccgc 118  Q
    ||||||||||||| |||||| ||||||||||||||  ||||||||    
T  7286954 ggatttatgcagggtgcataaggattccttatgcaccataaccgc 7286998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 8949471 - 8949503
Alignment:
Q  18 tggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||| ||||||||||    
T  8949471 tggttttggagtacaactcacaaaaaccatttc 8949503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 16552289 - 16552237
Alignment:
Q  76 atttatgcaggatgcatagggatt-ccttatgcatgataaccgcacccgttga 127  Q
    ||||||||||| |||||| ||||| |||||||||  |||||||||||||||||    
T  16552289 atttatgcagggtgcatacggatttccttatgcaccataaccgcacccgttga 16552237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 16668277 - 16668245
Alignment:
Q  18 tggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||| ||||||||||    
T  16668277 tggttttggagtacaactcacaaaaaccatttc 16668245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 3e-22; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 16299362 - 16299483
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccattt-cactgcaaaatacttaatgggttgggatttatgcaggatgcatagggattc 100  Q
    |||||||||| ||||||| |||| |||||||||||||||||||||||| |||||||||||  |||||||  || |||||||||| | ||||||  ||||     
T  16299362 catttccacatcaaaatgattttagagtacaactcacagaaaccatttccactgcaaaatggttaatggactgagatttatgcatggtgcataatgattt 16299461  T
Q  101 cttatgcatgataaccgcaccc 122  Q
    ||||| ||| ||||||||||||    
T  16299462 cttatacatcataaccgcaccc 16299483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 50644335 - 50644384
Alignment:
Q  1 tcatttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50644335 tcatttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50644384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 29826114 - 29826066
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29826114 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 29826066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1729032 - 1728983
Alignment:
Q  1 tcatttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1729032 tcatttccacagcaaaatggttttggagtacaactcacataaaccatttc 1728983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 6385803 - 6385755
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6385803 catttccacagcaaaatggttttggagtccaactcacagaaaccatttc 6385755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 24687060 - 24687120
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccattt-cactgcaaaata 61  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||    
T  24687060 catttccacagcaaaatggttttgaagttcaactcacagaaaccatttccactgcaaaata 24687120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 38010527 - 38010575
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  38010527 catttccacaacaaaatggttttggagtacaactcacagaaaccatttc 38010575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 20581959 - 20581900
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggattccttatgcatgataaccgcaccc 122  Q
    |||||||||||||||||||||| | |||||| |||| |||||||||||||||||||||||    
T  20581959 ttaatgggttgggatttatgcaaggtgcataaggatgccttatgcatgataaccgcaccc 20581900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 25573271 - 25573212
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggattccttatgcatgataaccgcaccc 122  Q
    |||||||| ||||||||||||||| ||||||  |||||||||||||||||||||||||||    
T  25573271 ttaatgggctgggatttatgcagggtgcataaagattccttatgcatgataaccgcaccc 25573212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 638760 - 638808
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  638760 catttccacagcaaaatgggtttggagtacaactcacaaaaaccatttc 638808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 25573665 - 25573617
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  25573665 catttccacaacaaaatggttttggagtccaactcacagaaaccatttc 25573617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 25573708 - 25573660
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  25573708 catttccacaacaaaatggtttaggagtacaactcacagaaaccatttc 25573660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 29826157 - 29826109
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||    
T  29826157 cattcccacagcaaaatggttttggagtacaacacacagaaaccatttc 29826109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 49137537 - 49137489
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  49137537 catttccacaacaaaatggttttggagtacaactcacataaaccatttc 49137489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 50562725 - 50562665
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggatt-ccttatgcatgataaccgcaccc 122  Q
    |||||||| ||||||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  50562725 ttaatgggctgggatttatgcacgatgcataaggatttccttatgcatgataaccgcaccc 50562665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 48076967 - 48076901
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggatt-ccttatgcatgataaccgcacccgttgac 128  Q
    |||||||| ||||||||||||| | |||||| ||||| ||||||||||||||||||||||| |||||    
T  48076967 ttaatgggctgggatttatgcacggtgcataaggatttccttatgcatgataaccgcaccctttgac 48076901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 10473286 - 10473331
Alignment:
Q  5 ttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||    
T  10473286 ttccacaacaaaatgggtttggagtacaactcacagaaaccatttc 10473331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 24687332 - 24687389
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggattccttatgcatgataaccgcac 120  Q
    |||||||| || || ||||||| |||||||| ||||||||||||||||||||||||||    
T  24687332 ttaatgggctgagacttatgcatgatgcataaggattccttatgcatgataaccgcac 24687389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 30358392 - 30358441
Alignment:
Q  1 tcatttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||| ||| |||||||||||||||||||||||| |||||||||||||||    
T  30358392 tcattcccatagcaaaatggttttggagtacaacacacagaaaccatttc 30358441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 1729074 - 1729026
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||| |||||||||||||||||||||||||||| |||||||| ||||||    
T  1729074 cattcccacagcaaaatggttttggagtacaacacacagaaatcatttc 1729026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 10473414 - 10473462
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||| |||||||| ||||||||||||||||||||||| |||||    
T  10473414 catttccacaacaaaatgggtttggagtacaactcacagaaactatttc 10473462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 20862183 - 20862231
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  20862183 catttccacaacaaaatggttttggagtacaactcaccgaaacgatttc 20862231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 26577533 - 26577485
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||| |||||||| |||||| ||||||||||||||||||||||    
T  26577533 catttccacatcaaaatgggtttggattacaactcacagaaaccatttc 26577485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 1492719 - 1492754
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||    
T  1492719 aaatggttttggagtacaactcacagaaaccatttc 1492754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 8166075 - 8166040
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||    
T  8166075 aaatggttttggagtacaactcacagaaaccatttc 8166040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 12722935 - 12722900
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||    
T  12722935 aaatggttttggagtacaactcacagaaaccatttc 12722900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 16475017 - 16474982
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||    
T  16475017 aaatggttttggagtacaactcacagaaaccatttc 16474982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 21995717 - 21995752
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||    
T  21995717 aaatggttttggagtacaactcacagaaaccatttc 21995752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 31763105 - 31763070
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||    
T  31763105 aaatggttttggagtacaactcacagaaaccatttc 31763070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 122
Target Start/End: Original strand, 34986929 - 34986988
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggattccttatgcatgataaccgcaccc 122  Q
    |||||||| || | |||||||||| |||||| |||| |||||||||||||||||||||||    
T  34986929 ttaatgggctgtgttttatgcagggtgcataaggatgccttatgcatgataaccgcaccc 34986988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 38245689 - 38245736
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccattt 49  Q
    |||||||||| |||||||| |||| |||||||||||||||||||||||    
T  38245689 catttccacaacaaaatgggtttgtagtacaactcacagaaaccattt 38245736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 54895451 - 54895486
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||||||||||||||    
T  54895451 aaatggttttggagtacaactcacagaaaccatttc 54895486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 9553124 - 9553090
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  9553124 aatggttttggagtacaactcacagaaaccatttc 9553090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 12722818 - 12722784
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  12722818 aatggttttggagtacaactcacagaaaccatttc 12722784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 21097768 - 21097802
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  21097768 aatggttttggagtacaactcacagaaaccatttc 21097802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 22180614 - 22180580
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  22180614 aatggttttggagtacaactcacagaaaccatttc 22180580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 27764916 - 27764950
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  27764916 aatggttttggagtacaactcacagaaaccatttc 27764950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 50644484 - 50644518
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  50644484 aatggttttggagtacaactcacagaaaccatttc 50644518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 53865207 - 53865241
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  53865207 aatggttttggagtacaactcacagaaaccatttc 53865241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 17109918 - 17109881
Alignment:
Q  13 caaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  17109918 caaaatgattttggagtacaactcacagaaaccatttc 17109881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 48
Target Start/End: Complemental strand, 38563958 - 38563925
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatt 48  Q
    ||||||||||||||||||||||||||||||||||    
T  38563958 aaatggttttggagtacaactcacagaaaccatt 38563925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 6842018 - 6841982
Alignment:
Q  14 aaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||| ||||||||||||||    
T  6842018 aaaatggttttggagtacaacttacagaaaccatttc 6841982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 9551603 - 9551559
Alignment:
Q  78 ttatgcaggatgcatagggattccttatgcatgataaccgcaccc 122  Q
    ||||||||| |||||| |||||||||||||||||||||| |||||    
T  9551603 ttatgcagggtgcataaggattccttatgcatgataaccacaccc 9551559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 20581635 - 20581575
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggattccttatgcatgataaccgcacccg 123  Q
    |||||||| || |||||||||| | || ||| |||| ||||||||||||||||||||||||    
T  20581635 ttaatgggctgagatttatgcaaggtgtataaggatgccttatgcatgataaccgcacccg 20581575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 33883481 - 33883445
Alignment:
Q  14 aaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||| ||||||||||    
T  33883481 aaaatggttttggagtacaactcacataaaccatttc 33883445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 36924287 - 36924323
Alignment:
Q  14 aaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||| |||||||||||||||||||||||||||||||    
T  36924287 aaaatagttttggagtacaactcacagaaaccatttc 36924323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 45256654 - 45256702
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||| |||||||| |||||| ||||||||||| ||||||||||    
T  45256654 catttccacaacaaaatgggtttggaatacaactcacataaaccatttc 45256702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 49137580 - 49137532
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||| |||| |||||||||||| |||||||||| |||||||||||||||    
T  49137580 cattcccacggcaaaatggtttcggagtacaacacacagaaaccatttc 49137532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 2124542 - 2124507
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||| |||||||||||||||||||    
T  2124542 aaatggttttggagtaaaactcacagaaaccatttc 2124507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 6385402 - 6385343
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggattccttatgcatgataaccgcaccc 122  Q
    |||||||| || || ||||||||| |||||| ||||||||||| |||||||||| |||||    
T  6385402 ttaatgggctgtgacttatgcagggtgcataaggattccttatacatgataaccacaccc 6385343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 6768450 - 6768497
Alignment:
Q  15 aaatggttttggagtacaactcacagaaacca-tttcactgcaaaata 61  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||    
T  6768450 aaatggttttggagtacaactcatagaaaccattttcacagcaaaata 6768497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 6806522 - 6806557
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||| ||||||||||||    
T  6806522 aaatggttttggagtacaactcaaagaaaccatttc 6806557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 8157286 - 8157251
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||| ||||||||||||||||||||||||||||||    
T  8157286 aaatgattttggagtacaactcacagaaaccatttc 8157251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 9967867 - 9967832
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||| ||||||||||||||||    
T  9967867 aaatggttttggagtacaattcacagaaaccatttc 9967832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 37059912 - 37059877
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||| ||||||||||    
T  37059912 aaatggttttggagtacaactcacaaaaaccatttc 37059877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 43374494 - 43374529
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||||| ||||||||||    
T  43374494 aaatggttttggagtacaactcacataaaccatttc 43374529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 4169054 - 4169088
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||| ||||||||||||||||||||||||||||||    
T  4169054 aatgattttggagtacaactcacagaaaccatttc 4169088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 6385832 - 6385798
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||| ||||||||||||    
T  6385832 aatggttttggagtacaactcatagaaaccatttc 6385798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 8165842 - 8165808
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||| ||||||||||||||||||||||    
T  8165842 aatggttttggaatacaactcacagaaaccatttc 8165808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 8165958 - 8165924
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||| ||||||||||||||||||||||    
T  8165958 aatggttttggaatacaactcacagaaaccatttc 8165924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 10374090 - 10374124
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccattt 49  Q
    ||||| |||||||||||||||||||||||||||||    
T  10374090 aaatgattttggagtacaactcacagaaaccattt 10374124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 21097900 - 21097934
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||| ||||||||||    
T  21097900 aatggttttggagtacaactcacataaaccatttc 21097934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 22180481 - 22180447
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||| ||||||||||    
T  22180481 aatggttttggagtacaactcacataaaccatttc 22180447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 29825967 - 29825933
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||| |||||||||||||||||||    
T  29825967 aatggttttggagtagaactcacagaaaccatttc 29825933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 30358618 - 30358652
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||| |||||||||||||||||||||||||    
T  30358618 aatggttttagagtacaactcacagaaaccatttc 30358652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 31763009 - 31762975
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||| ||||||||||    
T  31763009 aatggttttggagtacaactcacaaaaaccatttc 31762975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 36309581 - 36309615
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||| ||||||||||||||||||||||||    
T  36309581 aatggttttgaagtacaactcacagaaaccatttc 36309615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 38010498 - 38010532
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||| ||||||||||    
T  38010498 aatggttttggagtacaactcacaaaaaccatttc 38010532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 46
Target Start/End: Complemental strand, 43852207 - 43852177
Alignment:
Q  16 aatggttttggagtacaactcacagaaacca 46  Q
    |||||||||||||||||||||||||||||||    
T  43852207 aatggttttggagtacaactcacagaaacca 43852177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 49137391 - 49137357
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||| ||||||||||    
T  49137391 aatggttttggagtacaactcacataaaccatttc 49137357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 2847308 - 2847251
Alignment:
Q  65 aatgggttgggatttatgcaggatgcatagggattccttatgcatgataaccgcaccc 122  Q
    |||||| ||||||||||||||| || ||| ||||  ||||| ||||||||||||||||    
T  2847308 aatgggctgggatttatgcagggtgtataaggatgtcttatacatgataaccgcaccc 2847251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 45
Target Start/End: Complemental strand, 16474902 - 16474873
Alignment:
Q  16 aatggttttggagtacaactcacagaaacc 45  Q
    ||||||||||||||||||||||||||||||    
T  16474902 aatggttttggagtacaactcacagaaacc 16474873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 38563885 - 38563852
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccattt 49  Q
    |||||||||||||||||||||||| |||||||||    
T  38563885 aatggttttggagtacaactcacacaaaccattt 38563852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 49
Target Start/End: Complemental strand, 50562943 - 50562914
Alignment:
Q  20 gttttggagtacaactcacagaaaccattt 49  Q
    ||||||||||||||||||||||||||||||    
T  50562943 gttttggagtacaactcacagaaaccattt 50562914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 123
Target Start/End: Complemental strand, 562817 - 562769
Alignment:
Q  76 atttatgcaggatgcataggga-ttccttatgcatgataaccgcacccg 123  Q
    ||||||||||| |||||||||| |||||||||||  |||||||||||||    
T  562817 atttatgcagggtgcatagggatttccttatgcaccataaccgcacccg 562769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 50644293 - 50644341
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    |||| |||||||||||||||||||||||  |||||||| ||| ||||||    
T  50644293 cattcccacagcaaaatggttttggagtgtaactcacataaatcatttc 50644341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 6290 - 6338
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6290 catttccacagcaaaatgggtttggagtacaactcacagaaaccatttc 6338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 24604 - 24556
Alignment:
Q  2 catttccacagcaaaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24604 catttccacagcaaaatgggtttggagtacaactcacagaaaccatttc 24556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 63 - 122
Target Start/End: Original strand, 210027 - 210086
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggattccttatgcatgataaccgcaccc 122  Q
    |||||||||||||||||||||||  |||||| |||| |||||||||||||||||||||||    
T  210027 ttaatgggttgggatttatgcagagtgcataaggatgccttatgcatgataaccgcaccc 210086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 63 - 122
Target Start/End: Original strand, 119903 - 119962
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggattccttatgcatgataaccgcaccc 122  Q
    |||||||| ||||||||||||||  |||||| |||| |||||||||||||||||||||||    
T  119903 ttaatgggctgggatttatgcagagtgcataaggatgccttatgcatgataaccgcaccc 119962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 37121 - 37162
Alignment:
Q  8 cacagcaaaatggttttggagtacaactcacagaaaccattt 49  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  37121 cacagcaaaatgattttggagtacaactcacagaaaccattt 37162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 37; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 6559 - 6503
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggattccttatgcatgataaccgca 119  Q
    |||||||| ||||||||||||||  |||||| |||| ||||||||||||||||||||    
T  6559 ttaatgggctgggatttatgcagtgtgcataaggatgccttatgcatgataaccgca 6503  T

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Target: scaffold0194 (Bit Score: 35; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 28433 - 28467
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  28433 aatggttttggagtacaactcacagaaaccatttc 28467  T

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Target: scaffold0194; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 28300 - 28334
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||| ||||||||||||    
T  28300 aatggttttggagtacaactcagagaaaccatttc 28334  T

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Target: scaffold0097 (Bit Score: 35; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 14257 - 14291
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  14257 aatggttttggagtacaactcacagaaaccatttc 14291  T

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Target: scaffold0097; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 14390 - 14424
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  14390 aatggttttggagtacaactcacagaaaccatttc 14424  T

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Target: scaffold0009 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 203322 - 203288
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  203322 aatggttttggagtacaactcacagaaaccatttc 203288  T

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Target: scaffold0460 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 2321 - 2373
Alignment:
Q  63 ttaatgggttgggatttatgcaggatgcatagggattccttatgcatgataac 115  Q
    |||||||||||||||||||||||| ||||||  ||| |||||| |||||||||    
T  2321 ttaatgggttgggatttatgcagggtgcataatgatgccttattcatgataac 2373  T

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Target: scaffold0074 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 75 - 122
Target Start/End: Complemental strand, 35806 - 35759
Alignment:
Q  75 gatttatgcaggatgcatagggattccttatgcatgataaccgcaccc 122  Q
    |||||||||| | |||||| |||| |||||||||||||||||||||||    
T  35806 gatttatgcaaggtgcataaggatgccttatgcatgataaccgcaccc 35759  T

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Target: scaffold0004 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 96046 - 96081
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||| ||||||||||||||||    
T  96046 aaatggttttggagtacaaatcacagaaaccatttc 96081  T

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Target: scaffold0664 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 50
Target Start/End: Original strand, 3122 - 3152
Alignment:
Q  20 gttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||    
T  3122 gttttggagtacaactcacagaaaccatttc 3152  T

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Target: scaffold0516 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 1212 - 1246
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||| ||||||||||||||||||||||||||||||    
T  1212 aatgattttggagtacaactcacagaaaccatttc 1246  T

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Target: scaffold0291 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 9590 - 9556
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||| |||||||||||||||||||    
T  9590 aatggttttggagtataactcacagaaaccatttc 9556  T

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Target: scaffold0249 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 23624 - 23590
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||||||||||||||||| |||||||||||    
T  23624 aatggttttggagtacaactcacggaaaccatttc 23590  T

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Target: scaffold0249; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 50
Target Start/End: Complemental strand, 23725 - 23695
Alignment:
Q  20 gttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||||||||||||||||||||||||    
T  23725 gttttggagtacaactcacagaaaccatttc 23695  T

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Target: scaffold0129 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 20000 - 19966
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    ||||||||| |||||||||||||||||||||||||    
T  20000 aatggtttttgagtacaactcacagaaaccatttc 19966  T

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Target: scaffold0126 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 37680 - 37714
Alignment:
Q  15 aaatggttttggagtacaactcacagaaaccattt 49  Q
    ||||||||||||||||||||||||||||| |||||    
T  37680 aaatggttttggagtacaactcacagaaatcattt 37714  T

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Target: scaffold0102 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 15656 - 15622
Alignment:
Q  16 aatggttttggagtacaactcacagaaaccatttc 50  Q
    |||||||||| ||||||||||||||||||||||||    
T  15656 aatggttttgaagtacaactcacagaaaccatttc 15622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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