View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2811_2D_low_28 (Length: 208)
Name: NF2811_2D_low_28
Description: NF2811_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2811_2D_low_28 |
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Alignment Details
Target: chr8 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 21510514 - 21510346
Alignment:
| Q |
16 |
attatactaatactcacaagagtgtttgtttaatctatcttgttattttgaaaaatggattttgtgttttttactcctaaaccccacactttcattttga |
115 |
Q |
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| T |
21510514 |
attatactaatactcacaagagtgtttgtttaatctatcttgttattttgaaaaatggattttgtgttttttactcctaaaccccacactttcattttga |
21510415 |
T |
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| Q |
116 |
aaccaccctcttcttcttctcttctatttcatcctatcaagaagttccactctttgcctcctctctttg |
184 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
21510414 |
aaccaccctcttcttcttctcttctatttcatcctatcaagaagtttcactctttgcctcctctctttg |
21510346 |
T |
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