View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2813-Insertion-10 (Length: 614)
Name: NF2813-Insertion-10
Description: NF2813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2813-Insertion-10 |
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Alignment Details
Target: chr7 (Bit Score: 255; Significance: 1e-141; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 8 - 331
Target Start/End: Complemental strand, 42536425 - 42536102
Alignment:
| Q |
8 |
agatagttacgctacatcaattttccttttgaggttgaaaagacccttataaagccatgtttcaaaaactccccatttctctcannnnnnnactttcgcc |
107 |
Q |
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| T |
42536425 |
agatagttacgctacatcaattttccttttgaggttgaaaagacccttataaagccatgtttcaaaaactccccatttttctcatttttttactttcgcc |
42536326 |
T |
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| Q |
108 |
aacacaacacaaacaatgaaaacgaagttaaggacacgtggagacaacattattgagttttcagctgatttaaccccacgtaatatgatatggaccaagg |
207 |
Q |
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| T |
42536325 |
aacacaacacaaacaatgaaaacgaagttaaagacacgtggagacagcattattgagttttcagctgatttaaccccacgtaatatgatatggaccaagg |
42536226 |
T |
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| Q |
208 |
tgggtgagcacatcaccaaccacctcattgtttgtctcaatccaactaggcagttcttttgagcaattcactaaaatacattttatatttatttgnnnnn |
307 |
Q |
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| T |
42536225 |
tgggtgagcacatcaccaaccatctcattgtttgtcttaatccaactaggcagttcttttgagcaattcactaaaatacattttatatttatttgttttt |
42536126 |
T |
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| Q |
308 |
nnnacgtaatgtacgtaaaagttt |
331 |
Q |
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| T |
42536125 |
tttacgtaatgtatgtaaaagttt |
42536102 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 560 - 614
Target Start/End: Complemental strand, 42535878 - 42535820
Alignment:
| Q |
560 |
taagcagatagaaaatgtatatgtagt----aacaatttgtatgtgactttatgcttta |
614 |
Q |
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| T |
42535878 |
taagcagatagaaaatgtatatgtagtgagtaacaatttgtatgtgactttatgcttta |
42535820 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 438 - 475
Target Start/End: Complemental strand, 42536000 - 42535963
Alignment:
| Q |
438 |
cacactcattagactctaagggaatcgttgggatctcc |
475 |
Q |
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| T |
42536000 |
cacactcattagactctaagggaatcgttgggatctcc |
42535963 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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