View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2813-Insertion-12 (Length: 656)

Name: NF2813-Insertion-12
Description: NF2813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2813-Insertion-12
NF2813-Insertion-12
[»] chr8 (58 HSPs)
chr8 (417-656)||(32857029-32857275)
chr8 (175-325)||(18978029-18978179)
chr8 (195-331)||(29968298-29968434)
chr8 (192-325)||(18970920-18971053)
chr8 (173-332)||(22221302-22221463)
chr8 (173-332)||(22227644-22227805)
chr8 (173-332)||(12351923-12352083)
chr8 (173-331)||(11287779-11287938)
chr8 (173-332)||(12353300-12353458)
chr8 (185-332)||(24122885-24123032)
chr8 (192-332)||(18979078-18979219)
chr8 (205-332)||(5513984-5514111)
chr8 (173-332)||(10006346-10006507)
chr8 (173-332)||(22220390-22220551)
chr8 (173-332)||(10007701-10007862)
chr8 (173-332)||(30335641-30335802)
chr8 (205-331)||(11282011-11282138)
chr8 (205-329)||(1824049-1824174)
chr8 (205-329)||(1858494-1858619)
chr8 (177-332)||(30336443-30336600)
chr8 (175-332)||(30568889-30569046)
chr8 (211-332)||(32207302-32207422)
chr8 (233-332)||(8388466-8388564)
chr8 (173-331)||(30570195-30570353)
chr8 (232-321)||(1823566-1823655)
chr8 (232-321)||(1858011-1858100)
chr8 (173-319)||(24123841-24123983)
chr8 (185-330)||(45112875-45113019)
chr8 (173-329)||(45114456-45114612)
chr8 (197-332)||(29043400-29043536)
chr8 (174-332)||(43661267-43661427)
chr8 (173-332)||(42982593-42982756)
chr8 (173-329)||(43661761-43661919)
chr8 (205-332)||(11283180-11283308)
chr8 (204-332)||(24359811-24359938)
chr8 (180-303)||(18488208-18488331)
chr8 (218-317)||(24488664-24488762)
chr8 (226-332)||(5514263-5514368)
chr8 (195-331)||(40471107-40471244)
chr8 (173-313)||(2378882-2379023)
chr8 (269-332)||(23170034-23170096)
chr8 (239-320)||(5003103-5003184)
chr8 (235-331)||(8389690-8389787)
chr8 (205-275)||(34625171-34625241)
chr8 (179-332)||(36249554-36249708)
chr8 (232-332)||(32968458-32968559)
chr8 (232-332)||(32973934-32974035)
chr8 (232-332)||(38974797-38974898)
chr8 (232-332)||(38980042-38980143)
chr8 (232-332)||(39005895-39005996)
chr8 (232-332)||(39011139-39011240)
chr8 (204-316)||(2379894-2380004)
chr8 (278-332)||(24483145-24483200)
chr8 (205-265)||(11456679-11456739)
chr8 (204-311)||(40469364-40469471)
chr8 (279-332)||(11456640-11456694)
chr8 (288-332)||(11288914-11288959)
chr8 (173-282)||(17844328-17844436)
[»] chr4 (58 HSPs)
chr4 (173-332)||(31600924-31601084)
chr4 (173-329)||(31599794-31599951)
chr4 (174-332)||(21177999-21178157)
chr4 (175-331)||(35935474-35935631)
chr4 (204-332)||(19750545-19750673)
chr4 (204-332)||(19789133-19789261)
chr4 (173-332)||(1835040-1835201)
chr4 (173-332)||(1290136-1290297)
chr4 (173-332)||(13509297-13509457)
chr4 (208-332)||(26421597-26421720)
chr4 (173-332)||(50909611-50909772)
chr4 (226-332)||(48780250-48780357)
chr4 (173-332)||(1834121-1834283)
chr4 (186-331)||(8758789-8758935)
chr4 (173-331)||(35934347-35934504)
chr4 (204-332)||(25684936-25685065)
chr4 (204-332)||(25685792-25685921)
chr4 (173-332)||(52491548-52491706)
chr4 (204-332)||(5525362-5525490)
chr4 (173-332)||(10448199-10448359)
chr4 (173-331)||(12129626-12129786)
chr4 (204-332)||(49307998-49308125)
chr4 (186-332)||(8757677-8757822)
chr4 (204-332)||(10470548-10470677)
chr4 (204-332)||(10471358-10471487)
chr4 (204-331)||(37728535-37728662)
chr4 (173-332)||(10447008-10447169)
chr4 (204-332)||(5526096-5526224)
chr4 (173-332)||(17388149-17388309)
chr4 (204-332)||(13386502-13386632)
chr4 (231-332)||(17382995-17383096)
chr4 (205-331)||(8155741-8155867)
chr4 (231-332)||(1963198-1963300)
chr4 (204-332)||(13386016-13386147)
chr4 (175-331)||(1289100-1289258)
chr4 (232-324)||(21539069-21539162)
chr4 (234-331)||(27257960-27258057)
chr4 (205-326)||(46638696-46638817)
chr4 (226-332)||(48781038-48781144)
chr4 (173-332)||(1964379-1964540)
chr4 (8-55)||(31600758-31600805)
chr4 (205-332)||(49306777-49306903)
chr4 (233-332)||(14868892-14868990)
chr4 (233-332)||(14876944-14877042)
chr4 (252-331)||(55603549-55603628)
chr4 (175-264)||(8896851-8896940)
chr4 (231-313)||(33310086-33310168)
chr4 (173-332)||(46637684-46637845)
chr4 (242-332)||(50909275-50909365)
chr4 (232-332)||(3928856-3928957)
chr4 (232-332)||(3927668-3927769)
chr4 (204-276)||(37727755-37727827)
chr4 (173-245)||(54107949-54108021)
chr4 (458-514)||(31846896-31846952)
chr4 (241-313)||(54110635-54110707)
chr4 (231-297)||(33997851-33997916)
chr4 (445-514)||(15031970-15032039)
chr4 (259-331)||(55602379-55602451)
[»] chr3 (78 HSPs)
chr3 (173-332)||(54540729-54540889)
chr3 (173-331)||(7267647-7267805)
chr3 (173-332)||(54539757-54539917)
chr3 (173-332)||(19984851-19985011)
chr3 (173-332)||(22776751-22776911)
chr3 (173-331)||(7268766-7268924)
chr3 (173-332)||(8456480-8456640)
chr3 (175-332)||(7758404-7758563)
chr3 (173-332)||(12700177-12700336)
chr3 (173-332)||(19986009-19986171)
chr3 (173-332)||(49216249-49216409)
chr3 (173-332)||(29931228-29931389)
chr3 (173-332)||(29980382-29980543)
chr3 (173-332)||(47609699-47609860)
chr3 (204-331)||(47610550-47610678)
chr3 (196-332)||(55191957-55192093)
chr3 (231-332)||(29932696-29932797)
chr3 (231-332)||(29981850-29981951)
chr3 (175-332)||(52839039-52839197)
chr3 (204-332)||(46721190-46721319)
chr3 (204-332)||(51469974-51470103)
chr3 (204-332)||(51470425-51470553)
chr3 (173-308)||(31645000-31645135)
chr3 (226-332)||(12703492-12703598)
chr3 (185-331)||(54986958-54987103)
chr3 (173-332)||(47614187-47614348)
chr3 (185-332)||(52840554-52840703)
chr3 (205-332)||(534501-534629)
chr3 (233-330)||(24516464-24516562)
chr3 (173-332)||(51038728-51038889)
chr3 (232-332)||(51037538-51037638)
chr3 (206-321)||(34019117-34019232)
chr3 (173-311)||(4271464-4271602)
chr3 (206-332)||(11671313-11671439)
chr3 (233-332)||(5029682-5029781)
chr3 (174-331)||(23770346-23770505)
chr3 (206-332)||(46719943-46720070)
chr3 (173-302)||(55191544-55191672)
chr3 (173-331)||(34940126-34940284)
chr3 (173-331)||(49398130-49398288)
chr3 (239-332)||(535787-535881)
chr3 (205-332)||(8875908-8876036)
chr3 (204-331)||(51347271-51347399)
chr3 (204-311)||(6249633-6249739)
chr3 (249-332)||(53901403-53901485)
chr3 (204-329)||(23769862-23769987)
chr3 (173-265)||(47615515-47615608)
chr3 (173-265)||(22775816-22775908)
chr3 (232-332)||(28262195-28262295)
chr3 (174-331)||(40426717-40426877)
chr3 (260-332)||(5001202-5001275)
chr3 (232-332)||(28263109-28263210)
chr3 (218-321)||(6170286-6170387)
chr3 (277-332)||(47615591-47615647)
chr3 (8-55)||(54540030-54540077)
chr3 (173-275)||(10457600-10457702)
chr3 (11-53)||(49401270-49401312)
chr3 (455-512)||(29081598-29081655)
chr3 (231-331)||(53616013-53616114)
chr3 (458-514)||(20286901-20286957)
chr3 (232-332)||(18442632-18442734)
chr3 (232-332)||(19487706-19487808)
chr3 (204-331)||(46492987-46493113)
chr3 (281-327)||(22775783-22775829)
chr3 (208-330)||(51348249-51348366)
chr3 (206-264)||(53897173-53897231)
chr3 (177-261)||(10583983-10584067)
chr3 (238-332)||(18456067-18456163)
chr3 (232-332)||(52276306-52276407)
chr3 (232-332)||(52281545-52281646)
chr3 (173-317)||(6171182-6171324)
chr3 (173-216)||(49220491-49220534)
chr3 (452-522)||(22893890-22893959)
chr3 (185-251)||(49401439-49401505)
chr3 (226-331)||(52104484-52104586)
chr3 (231-332)||(53614821-53614922)
chr3 (279-332)||(26633363-26633416)
chr3 (184-277)||(54654256-54654349)
[»] chr5 (52 HSPs)
chr5 (173-329)||(36486427-36486584)
chr5 (173-331)||(28539759-28539917)
chr5 (173-332)||(28538678-28538838)
chr5 (178-332)||(36485302-36485457)
chr5 (173-332)||(40255611-40255771)
chr5 (173-331)||(24332916-24333075)
chr5 (173-332)||(19752914-19753074)
chr5 (206-332)||(25523071-25523198)
chr5 (175-332)||(22940563-22940721)
chr5 (173-332)||(16650793-16650954)
chr5 (173-332)||(33160226-33160385)
chr5 (173-332)||(18486840-18487001)
chr5 (173-332)||(1797236-1797395)
chr5 (213-332)||(21835043-21835162)
chr5 (173-331)||(42195137-42195295)
chr5 (226-332)||(5777903-5778008)
chr5 (173-332)||(25056318-25056480)
chr5 (204-332)||(5778806-5778935)
chr5 (173-332)||(25055414-25055575)
chr5 (173-284)||(16650043-16650155)
chr5 (205-321)||(19754101-19754217)
chr5 (173-326)||(1015492-1015646)
chr5 (173-332)||(20214198-20214358)
chr5 (245-321)||(33158112-33158188)
chr5 (173-332)||(18485140-18485308)
chr5 (205-294)||(25524069-25524158)
chr5 (231-332)||(1796056-1796158)
chr5 (204-332)||(42196170-42196299)
chr5 (173-331)||(20216701-20216861)
chr5 (204-331)||(2186774-2186901)
chr5 (205-312)||(2686372-2686479)
chr5 (248-332)||(25524141-25524227)
chr5 (204-317)||(5730832-5730945)
chr5 (240-317)||(7311608-7311685)
chr5 (208-321)||(18154508-18154619)
chr5 (8-55)||(28538930-28538977)
chr5 (8-55)||(36485575-36485622)
chr5 (173-321)||(1016803-1016950)
chr5 (260-332)||(5730443-5730517)
chr5 (458-512)||(1839970-1840024)
chr5 (231-321)||(38834101-38834190)
chr5 (261-314)||(34893686-34893739)
chr5 (458-514)||(29385390-29385446)
chr5 (177-332)||(5962515-5962669)
chr5 (185-266)||(36221062-36221144)
chr5 (259-316)||(2685763-2685820)
chr5 (259-332)||(21834944-21835017)
chr5 (173-265)||(5961476-5961568)
chr5 (443-514)||(7137734-7137805)
chr5 (284-331)||(24025313-24025360)
chr5 (204-264)||(3597394-3597453)
chr5 (458-514)||(19417442-19417498)
[»] chr1 (64 HSPs)
chr1 (173-332)||(39699706-39699865)
chr1 (173-332)||(14999287-14999443)
chr1 (173-331)||(45149909-45150068)
chr1 (173-332)||(24422802-24422963)
chr1 (173-331)||(39153055-39153214)
chr1 (180-321)||(14999901-15000042)
chr1 (173-332)||(52274970-52275131)
chr1 (173-332)||(45148583-45148742)
chr1 (192-332)||(45157167-45157307)
chr1 (205-331)||(43058789-43058915)
chr1 (173-332)||(36613842-36614003)
chr1 (175-332)||(11437139-11437298)
chr1 (173-331)||(43378651-43378810)
chr1 (204-332)||(51684368-51684497)
chr1 (173-321)||(39151945-39152093)
chr1 (173-321)||(44404456-44404604)
chr1 (173-300)||(44411905-44412032)
chr1 (173-332)||(35594219-35594378)
chr1 (173-332)||(52827349-52827510)
chr1 (204-331)||(24426045-24426173)
chr1 (204-332)||(41364831-41364959)
chr1 (173-332)||(11436044-11436205)
chr1 (192-332)||(39698565-39698705)
chr1 (208-332)||(51685739-51685864)
chr1 (226-332)||(33088609-33088716)
chr1 (173-332)||(35595130-35595292)
chr1 (205-331)||(50680335-50680461)
chr1 (205-332)||(43059977-43060105)
chr1 (232-332)||(23980464-23980565)
chr1 (204-331)||(52828040-52828168)
chr1 (204-331)||(7983053-7983180)
chr1 (205-332)||(39222444-39222573)
chr1 (196-331)||(45156052-45156188)
chr1 (205-331)||(37526849-37526975)
chr1 (226-332)||(7675451-7675557)
chr1 (231-332)||(35066999-35067101)
chr1 (208-332)||(36612855-36612979)
chr1 (256-332)||(7674530-7674605)
chr1 (204-331)||(52276133-52276261)
chr1 (186-303)||(40384757-40384874)
chr1 (205-332)||(25652717-25652844)
chr1 (205-331)||(30249461-30249588)
chr1 (226-332)||(41366123-41366229)
chr1 (204-329)||(46066530-46066653)
chr1 (204-332)||(2940268-2940396)
chr1 (231-332)||(12389979-12390080)
chr1 (197-332)||(33739096-33739231)
chr1 (173-321)||(43377734-43377883)
chr1 (173-261)||(46525739-46525827)
chr1 (173-313)||(33088089-33088229)
chr1 (243-332)||(11190387-11190477)
chr1 (173-261)||(46524613-46524701)
chr1 (452-517)||(49200057-49200122)
chr1 (205-277)||(30248170-30248241)
chr1 (205-332)||(31194057-31194183)
chr1 (173-266)||(14512561-14512654)
chr1 (263-316)||(48441084-48441137)
chr1 (458-514)||(6539664-6539720)
chr1 (262-332)||(50681632-50681703)
chr1 (205-332)||(16290095-16290224)
chr1 (452-522)||(28045418-28045487)
chr1 (203-256)||(17505040-17505093)
chr1 (457-525)||(5995355-5995423)
chr1 (457-521)||(37155036-37155100)
[»] chr6 (40 HSPs)
chr6 (173-331)||(1829542-1829701)
chr6 (177-332)||(16704440-16704596)
chr6 (173-332)||(10784594-10784756)
chr6 (173-321)||(10785852-10786000)
chr6 (179-331)||(26574999-26575150)
chr6 (192-332)||(26574621-26574761)
chr6 (173-332)||(14823514-14823675)
chr6 (173-332)||(7314882-7315042)
chr6 (204-332)||(3721614-3721743)
chr6 (204-332)||(8659267-8659396)
chr6 (173-329)||(29473082-29473239)
chr6 (173-328)||(14822366-14822522)
chr6 (204-332)||(8660174-8660302)
chr6 (204-332)||(27437830-27437959)
chr6 (226-332)||(8821875-8821982)
chr6 (173-332)||(7316232-7316393)
chr6 (204-331)||(34834549-34834677)
chr6 (226-332)||(8822785-8822892)
chr6 (233-332)||(27322067-27322166)
chr6 (173-332)||(12382649-12382810)
chr6 (213-332)||(3333005-3333125)
chr6 (204-331)||(5658759-5658887)
chr6 (205-316)||(17496816-17496928)
chr6 (217-332)||(16703572-16703685)
chr6 (218-332)||(3333151-3333265)
chr6 (260-332)||(3722533-3722606)
chr6 (234-310)||(12350823-12350898)
chr6 (218-329)||(6840199-6840309)
chr6 (204-332)||(6842253-6842382)
chr6 (193-311)||(26949144-26949259)
chr6 (226-317)||(34830920-34831011)
chr6 (205-275)||(3333496-3333566)
chr6 (233-332)||(27318317-27318418)
chr6 (231-332)||(30495694-30495795)
chr6 (179-265)||(26717057-26717144)
chr6 (183-297)||(15305912-15306024)
chr6 (231-316)||(30494575-30494660)
chr6 (277-332)||(26717127-26717183)
chr6 (453-522)||(2543734-2543802)
chr6 (180-256)||(22418841-22418917)
[»] scaffold0302 (2 HSPs)
scaffold0302 (173-332)||(17472-17632)
scaffold0302 (185-332)||(18727-18875)
[»] chr7 (43 HSPs)
chr7 (173-331)||(42886225-42886384)
chr7 (180-329)||(14999101-14999249)
chr7 (173-332)||(31659624-31659786)
chr7 (205-332)||(18371426-18371554)
chr7 (205-332)||(7500457-7500584)
chr7 (173-321)||(18372395-18372544)
chr7 (173-332)||(7501790-7501951)
chr7 (173-332)||(17781663-17781824)
chr7 (204-332)||(3227564-3227693)
chr7 (204-332)||(31949324-31949453)
chr7 (204-332)||(127339-127466)
chr7 (204-332)||(3227110-3227238)
chr7 (205-332)||(22630423-22630551)
chr7 (173-303)||(22629518-22629649)
chr7 (179-331)||(128545-128699)
chr7 (207-332)||(21505418-21505542)
chr7 (204-332)||(31949772-31949901)
chr7 (204-332)||(47525337-47525466)
chr7 (239-332)||(17782558-17782652)
chr7 (173-312)||(6618230-6618370)
chr7 (173-315)||(47369801-47369944)
chr7 (231-332)||(48934900-48935002)
chr7 (173-332)||(11658381-11658542)
chr7 (173-332)||(34352725-34352885)
chr7 (198-331)||(11662515-11662649)
chr7 (173-267)||(14998048-14998141)
chr7 (195-332)||(48933670-48933805)
chr7 (187-264)||(770714-770791)
chr7 (173-332)||(46482599-46482760)
chr7 (261-332)||(34174010-34174081)
chr7 (173-316)||(34351511-34351650)
chr7 (197-332)||(769415-769551)
chr7 (205-332)||(30439329-30439456)
chr7 (261-327)||(47524532-47524599)
chr7 (263-332)||(20163585-20163655)
chr7 (180-265)||(32253373-32253458)
chr7 (218-332)||(31660993-31661108)
chr7 (277-331)||(46483551-46483605)
chr7 (254-315)||(597304-597364)
chr7 (208-331)||(43900463-43900585)
chr7 (205-311)||(43899470-43899576)
chr7 (208-265)||(21508407-21508464)
chr7 (453-517)||(17272799-17272862)
[»] chr2 (50 HSPs)
chr2 (173-332)||(7899821-7899981)
chr2 (173-332)||(36449780-36449940)
chr2 (173-332)||(38840432-38840592)
chr2 (173-332)||(18797248-18797410)
chr2 (177-331)||(36450864-36451018)
chr2 (173-331)||(7898694-7898853)
chr2 (195-332)||(41878094-41878234)
chr2 (173-332)||(22587893-22588052)
chr2 (173-321)||(38839256-38839404)
chr2 (173-321)||(41879151-41879299)
chr2 (173-332)||(22848193-22848354)
chr2 (173-332)||(802530-802689)
chr2 (204-332)||(18299375-18299504)
chr2 (206-332)||(18300697-18300821)
chr2 (218-332)||(23869519-23869633)
chr2 (204-332)||(11258781-11258910)
chr2 (176-332)||(13570499-13570656)
chr2 (173-314)||(22587522-22587662)
chr2 (205-332)||(18905959-18906086)
chr2 (173-332)||(11257624-11257784)
chr2 (173-309)||(26545459-26545596)
chr2 (205-332)||(11938760-11938887)
chr2 (205-332)||(13030294-13030419)
chr2 (208-332)||(18904369-18904494)
chr2 (173-331)||(28617926-28618084)
chr2 (231-331)||(8535653-8535752)
chr2 (204-332)||(24475227-24475355)
chr2 (173-303)||(810720-810850)
chr2 (226-332)||(1033213-1033318)
chr2 (240-332)||(1034475-1034568)
chr2 (173-331)||(13567975-13568133)
chr2 (173-321)||(18869100-18869251)
chr2 (253-328)||(24476863-24476937)
chr2 (181-332)||(1093093-1093244)
chr2 (257-332)||(18868926-18869002)
chr2 (173-331)||(26544152-26544311)
chr2 (204-303)||(11996739-11996838)
chr2 (252-315)||(32739643-32739706)
chr2 (231-332)||(16446156-16446258)
chr2 (231-331)||(8534586-8534685)
chr2 (279-331)||(13830270-13830322)
chr2 (177-256)||(27553708-27553787)
chr2 (458-514)||(39819060-39819116)
chr2 (458-509)||(12918535-12918586)
chr2 (277-332)||(21837298-21837352)
chr2 (205-275)||(1410060-1410130)
chr2 (205-275)||(22067753-22067823)
chr2 (206-294)||(1091736-1091824)
chr2 (192-276)||(32739710-32739794)
chr2 (444-483)||(18182530-18182569)
[»] scaffold0632 (1 HSPs)
scaffold0632 (173-332)||(3247-3406)
[»] scaffold0019 (2 HSPs)
scaffold0019 (204-332)||(60092-60221)
scaffold0019 (204-332)||(61429-61558)
[»] scaffold2034 (2 HSPs)
scaffold2034 (173-332)||(235-395)
scaffold2034 (173-311)||(917-1055)
[»] scaffold1303 (1 HSPs)
scaffold1303 (173-332)||(1441-1602)
[»] scaffold0059 (2 HSPs)
scaffold0059 (173-332)||(4669-4828)
scaffold0059 (173-315)||(3695-3837)
[»] scaffold0294 (2 HSPs)
scaffold0294 (204-332)||(5408-5537)
scaffold0294 (204-332)||(4444-4573)
[»] scaffold0320 (1 HSPs)
scaffold0320 (205-332)||(19490-19618)
[»] scaffold0049 (3 HSPs)
scaffold0049 (213-332)||(7394-7514)
scaffold0049 (217-332)||(7540-7655)
scaffold0049 (205-272)||(7890-7957)
[»] scaffold0186 (2 HSPs)
scaffold0186 (175-332)||(23083-23239)
scaffold0186 (203-332)||(23858-23989)
[»] scaffold0112 (1 HSPs)
scaffold0112 (204-332)||(37150-37278)
[»] scaffold0003 (1 HSPs)
scaffold0003 (204-332)||(49403-49532)
[»] scaffold0093 (2 HSPs)
scaffold0093 (204-332)||(2435-2563)
scaffold0093 (204-332)||(7058-7186)
[»] scaffold0321 (1 HSPs)
scaffold0321 (173-332)||(18730-18891)
[»] scaffold0586 (2 HSPs)
scaffold0586 (226-331)||(6346-6452)
scaffold0586 (205-332)||(8998-9124)
[»] scaffold0045 (2 HSPs)
scaffold0045 (259-332)||(49109-49183)
scaffold0045 (204-303)||(48341-48437)
[»] scaffold0369 (1 HSPs)
scaffold0369 (243-332)||(13195-13283)
[»] scaffold0227 (1 HSPs)
scaffold0227 (232-332)||(117-218)
[»] scaffold0002 (1 HSPs)
scaffold0002 (278-316)||(15702-15740)


Alignment Details
Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 417 - 656
Target Start/End: Original strand, 32857029 - 32857275
Alignment:
Q  417 ttggccaaccattttctttcataataattttttgtt-------acacttgtgacattgtggttggcctatgtcatcgatgtcattaaccacaatgtcacc 509  Q
    |||| |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||    
T  32857029 ttgggcaaccattttctttcataataattttttgtttctttgtacacttgtgacattgtggttggcctatgtcatcaatgtcatcaaccacaatatcacc 32857128  T
Q  510 caagtattttcccattagttatattacattcaacaacataattactagagtataatttaaaattttaatatttaaagttatataatttccttaagtgggg 609  Q
    ||| |||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32857129 caaatattttcccgctagttatattacattcaacaacataattactacagtataatttaaaatattaatatttaaagttatataatttccttaagtgggg 32857228  T
Q  610 atccatcatacccggattcccttctgttttacactcttcttccctac 656  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  32857229 atccatcatacccggattcccttctgttttacactcttcttccctac 32857275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 175 - 325
Target Start/End: Complemental strand, 18978179 - 18978029
Alignment:
Q  175 acacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttg 274  Q
    ||||||||| |||||| |||||||||||| ||||||||||  ||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  18978179 acacgtggcgtgccacgtaggcattgacccgtcaaaattggaaaaaaggatcaaagttgcaaaggggctaaatcttaaggggccaaaattgtagtttttg 18978080  T
Q  275 tacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgc 325  Q
    ||||||||||| |||||||| ||| |||| |||||||||||||||||||||    
T  18978079 tacttagggggccaaaattgaaagattttgaaagttaggggggaaaagtgc 18978029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 195 - 331
Target Start/End: Original strand, 29968298 - 29968434
Alignment:
Q  195 gcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattg 294  Q
    |||||||||||||||||||| | |||| ||| |||||||||| ||||||||||||||||||  || ||||||||||||||||||||||||| ||||||||    
T  29968298 gcattgaccggtcaaaattggccaaaatgattaaagttgcaatggggctaaatcttaggggaccagaattgtagtttttgtacttagggggccaaaattg 29968397  T
Q  295 caagtttttaaaagttaggggggaaaagtgcacttta 331  Q
    ||||||||||||||||| |||||||||||||||||||    
T  29968398 caagtttttaaaagttaagggggaaaagtgcacttta 29968434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 192 - 325
Target Start/End: Complemental strand, 18971053 - 18970920
Alignment:
Q  192 taggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaa 291  Q
    ||||||||||||||||||||||| |||||| || |||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||| |||||    
T  18971053 taggcattgaccggtcaaaattggcaaaaaggaccaaagttgcaaaggggttaaatcttcaggggtcaaaattgtagtttttgtacttagggggccaaaa 18970954  T
Q  292 ttgcaagtttttaaaagttaggggggaaaagtgc 325  Q
    ||| ||| |||| |||||||||||||||||||||    
T  18970953 ttgaaagattttgaaagttaggggggaaaagtgc 18970920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 22221302 - 22221463
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||||| ||| ||| || ||||||  |||||||||| | |||| |||||||| || |||||||||||||||||||||||||||||||||||||    
T  22221302 acacacgtggcataccaaataagcgttgaccaagtcaaaattggctaaaaggatcaaagatgtaaaggggctaaatcttagggggtcaaaattgtagttt 22221401  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttag 332  Q
    |  ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  22221402 taatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttag 22221463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 22227644 - 22227805
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||||| ||| ||| || ||||||  |||||||||| | |||| |||||||| || |||||||||||||||||||||||||||||||||||||    
T  22227644 acacacgtggcataccaaataagcgttgaccaagtcaaaattggctaaaaggatcaaagatgtaaaggggctaaatcttagggggtcaaaattgtagttt 22227743  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttag 332  Q
    |  ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  22227744 taatacttagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttag 22227805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 12352083 - 12351923
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||||||| || |||||||| |||||||||||||||||||| | |||| | | ||| |||||| | |||||||||||||||||||||||||||||||||    
T  12352083 acacacgtgacacgccacatatgcattgaccggtcaaaattgtccaaaagggttaaaattgcaatgaggctaaatcttagggggtcaaaattgtagtttt 12351984  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||||| ||| ||||||||||    
T  12351983 tgtacttagggggtcaaaattgcaaatttttgaaagttaagggggggaaaatgcactttag 12351923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 173 - 331
Target Start/End: Complemental strand, 11287938 - 11287779
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||| |||||||||| ||||||| |||||||||||||||||| ||||| ||||||| ||||||||| | ||| |||||||||| ||||||||||||||     
T  11287938 acacatgtggcatgccgcataggcgttgaccggtcaaaattgataaaaatgatcaaaattgcaaaggagttaattcttagggggccaaaattgtagtttc 11287839  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttagggg-ggaaaagtgcacttta 331  Q
    ||||||||| ||| ||||||||||||||||| ||||||||||| | ||||||||||||||    
T  11287838 tgtacttagtgggccaaaattgcaagttttttaaagttaggggtgaaaaagtgcacttta 11287779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 12353300 - 12353458
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||||||||| ||||  || |||||||||||||||||||||| ||||  || ||| |||||| ||||||||||||||||||| ||||||| ||| |||    
T  12353300 acacacgtggcacgccatgtaagcattgaccggtcaaaattgaccaaaagaattaaaattgcaatggggctaaatcttagggggccaaaattatag-ttt 12353398  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    ||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||    
T  12353399 tgtacttagggggccaaaattgcaagtttttgaaagttaagggggaaaagtgcactttag 12353458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 185 - 332
Target Start/End: Complemental strand, 24123032 - 24122885
Alignment:
Q  185 tgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggg 284  Q
    |||||| ||||||||||||||||||||||||| |||| || ||||| |||||||  |||||||||||||||   |||||| |||||||||||||||||||    
T  24123032 tgccacgtaggcattgaccggtcaaaattgaccaaaaggaccaaagatgcaaagaagctaaatcttaggggactaaaattatagtttttgtacttagggg 24122933  T
Q  285 gtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    ||||||||||||| ||||| ||||||||||||||||| ||||||||||    
T  24122932 gtcaaaattgcaaattttttaaagttaggggggaaaaatgcactttag 24122885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 192 - 332
Target Start/End: Original strand, 18979078 - 18979219
Alignment:
Q  192 taggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaa 291  Q
    |||||||||||| |||||||||| |||||| ||||||||||||||| |||||||||| || |||| |||||||||||||||| || |||||||| |||||    
T  18979078 taggcattgacctgtcaaaattggcaaaaaggatcaaagttgcaaatgggctaaatcataaggggccaaaattgtagtttttatatttagggggccaaaa 18979177  T
Q  292 ttgcaagtttttaaaagtta-ggggggaaaagtgcactttag 332  Q
    ||||||||| || ||||||| |||||||||||||||||||||    
T  18979178 ttgcaagttgttgaaagttagggggggaaaagtgcactttag 18979219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 205 - 332
Target Start/End: Complemental strand, 5514111 - 5513984
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    |||||||||||  |||| || ||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||| ||||||||     
T  5514111 gtcaaaattgatcaaaaggaccaaagatgcaaaggggctaaattttaggggggcaaaattgtagtttttgtacttagggggccaaaattggaagtttttg 5514012  T
Q  305 aaagttaggggggaaaagtgcactttag 332  Q
    |||||||||||| |||||||||||||||    
T  5514011 aaagttagggggtaaaagtgcactttag 5513984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 10006507 - 10006346
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||| |||||| ||||| ||||    |||||||||||| |||| || ||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  10006507 acacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgttgttt 10006408  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttag 332  Q
    |  ||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||    
T  10006407 tgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttag 10006346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 22220551 - 22220390
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccgg-tcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||||||||| ||  ||||||||  | ||||||||||  |||| || ||||| |||||| |||||||||||||||||| ||||||||||||||    
T  22220551 acacacgtggcatgccaaatcagcattgacttgctcaaaattgatcaaaaggaccaaagatgcaaatgggctaaatcttagggggccaaaattgtagttt 22220452  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttag 332  Q
    || ||| ||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  22220451 ttatacatagggggtcaaaattgcaagtattttaaagttagagggggaaaagtgcactttag 22220390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 10007701 - 10007862
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||| |||||| ||||| ||||    |||||||||||| |||| || ||||| ||||||||||||||||||||||||  ||||||||| ||||    
T  10007701 acacacgtggcctgccacgtaggcgttgaataagtcaaaattgacgaaaaggaccaaagatgcaaaggggctaaatcttaggggaccaaaattgtggttt 10007800  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
     | ||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  10007801 ctatacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttag 10007862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 30335802 - 30335641
Alignment:
Q  173 acacacgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||| ||||||||||||| | || |||||  ||||||||||||  |||| || ||||| |||||||||||||||||||||||||| ||||||||| |||    
T  30335802 acacatgtggcatgccacacatgcgttgacttggtcaaaattgaacaaaaggaccaaagatgcaaaggggctaaatcttagggggttaaaattgtaattt 30335703  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    |||||||||| | | |||||||||||||||||||||||| |||| |||||| ||||||||||    
T  30335702 ttgtacttagcgagccaaaattgcaagtttttaaaagttaagggtggaaaaatgcactttag 30335641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 205 - 331
Target Start/End: Complemental strand, 11282138 - 11282011
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    |||||||||||  |||||||||||| ||||||||||| ||||||||||||||||||||||||  ||||||||  ||||||| ||||||||||| ||||||    
T  11282138 gtcaaaattgatcaaaaagatcaaaattgcaaaggggttaaatcttagggggtcaaaattgtcatttttgtatatagggggccaaaattgcaacttttta 11282039  T
Q  305 aaagtt-aggggggaaaagtgcacttta 331  Q
    |||||| |||||| ||||||||||||||    
T  11282038 aaagttaagggggaaaaagtgcacttta 11282011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 205 - 329
Target Start/End: Original strand, 1824049 - 1824174
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    |||||||||||| |||| || ||||| ||||||  ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||     
T  1824049 gtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagtttttg 1824148  T
Q  305 aaagttag-gggggaaaagtgcactt 329  Q
    |||||||| ||||||||| |||||||    
T  1824149 aaagttagagggggaaaaatgcactt 1824174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 205 - 329
Target Start/End: Original strand, 1858494 - 1858619
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    |||||||||||| |||| || ||||| ||||||  ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||     
T  1858494 gtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagtttttg 1858593  T
Q  305 aaagttag-gggggaaaagtgcactt 329  Q
    |||||||| ||||||||| |||||||    
T  1858594 aaagttagagggggaaaaatgcactt 1858619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 177 - 332
Target Start/End: Original strand, 30336443 - 30336600
Alignment:
Q  177 acgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgt 275  Q
    ||||||||||||||| | ||||||||  ||||||||||||| |||| || ||||| ||||||  ||||||||||||| |||| |||||||||||||||||    
T  30336443 acgtggcatgccacacatgcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagagggttaaaattgtagtttttgt 30336542  T
Q  276 acttagggggtcaaaattgcaagtttttaaaagttaggggggaa-aagtgcactttag 332  Q
    ||||||| ||  ||||||  |||||||| ||||||||||||||| |||||||||||||    
T  30336543 acttaggaggctaaaattataagtttttgaaagttaggggggaagaagtgcactttag 30336600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 175 - 332
Target Start/End: Complemental strand, 30569046 - 30568889
Alignment:
Q  175 acacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttg 274  Q
    ||||||||| |||||| ||| ||||||| ||||| ||||| | |||| || ||||| |||||||||||||||||||||||| |||||||| |||||||||    
T  30569046 acacgtggcgtgccacgtagacattgactggtcacaattggccaaaaggaccaaagatgcaaaggggctaaatcttaggggatcaaaattatagtttttg 30568947  T
Q  275 tacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    ||| || | | ||||||||| || ||||| ||| |||| |||| ||||||||||||||    
T  30568946 tacctaagagatcaaaattgtaactttttgaaacttagagggggaaagtgcactttag 30568889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 211 - 332
Target Start/End: Original strand, 32207302 - 32207422
Alignment:
Q  211 attgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtt 310  Q
    |||||| |||| || ||||| ||||||| |||||||||||| | || |||||||||||||||||||||||||| ||||||||||||||||||| || |||    
T  32207302 attgaccaaaaggaccaaagatgcaaagaggctaaatcttaagaggccaaaattgtagtttttgtacttagggcgtcaaaattgcaagtttttgaaggtt 32207401  T
Q  311 aggggggaaaagtgcactttag 332  Q
    ||||||| ||||||||||||||    
T  32207402 agggggg-aaagtgcactttag 32207422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 233 - 332
Target Start/End: Complemental strand, 8388564 - 8388466
Alignment:
Q  233 gcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    |||||||||||||||||||||||| ||||||| |||||||||||| |||||||  |||||||||| ||||||||||||||||||| ||||||||||||||    
T  8388564 gcaaaggggctaaatcttagggggccaaaattatagtttttgtacatagggggctaaaattgcaactttttaaaagttagggggg-aaagtgcactttag 8388466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 173 - 331
Target Start/End: Original strand, 30570195 - 30570353
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||||||||| |||||| ||| ||||||| ||||||||||| | |||| || ||||| |||||| |||||||||||||||||| ||||||| || ||||    
T  30570195 acacacgtggcgtgccacgtagacattgactggtcaaaattggccaaaaggaccaaagatgcaaaagggctaaatcttagggggccaaaattctaatttt 30570294  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaa-gtgcacttta 331  Q
    ||||| ||  || |||||||||||| ||||||||| |||| |||||||| ||||||||||    
T  30570295 tgtacata-aggatcaaaattgcaactttttaaaacttagaggggaaaaggtgcacttta 30570353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 232 - 321
Target Start/End: Complemental strand, 1823655 - 1823566
Alignment:
Q  232 tgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaa 321  Q
    |||||| |||||||||||||||||  | |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  1823655 tgcaaatgggctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaa 1823566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 232 - 321
Target Start/End: Complemental strand, 1858100 - 1858011
Alignment:
Q  232 tgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaa 321  Q
    |||||| |||||||||||||||||  | |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  1858100 tgcaaatgggctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaa 1858011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 173 - 319
Target Start/End: Original strand, 24123841 - 24123983
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||||||||| ||||||    ||||| |||||||||||||||| |||| || ||||| |||||||||||||||||||||| ||  ||||||||| ||||    
T  24123841 acacacgtggcgtgccac----gcattaaccggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttaggaggctaaaattgtaatttt 24123936  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaa 319  Q
     ||||||| | || ||||||||||||||||| ||||||| |||||||    
T  24123937 agtacttaagaggccaaaattgcaagtttttgaaagttacgggggaa 24123983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 185 - 330
Target Start/End: Complemental strand, 45113019 - 45112875
Alignment:
Q  185 tgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggg 284  Q
    |||||| |||| ||||||| ||||||||||| ||||||||||||| ||||||||||||||| |||||||||  ||||||| || ||||||||||||| |     
T  45113019 tgccacgtaggtattgaccagtcaaaattgataaaaaagatcaaaattgcaaaggggctaattcttaggggaccaaaattataatttttgtacttagaga 45112920  T
Q  285 gtcaaaattgcaagtttttaaaagttaggggggaaaagtgcacttt 330  Q
     | |||||| ||| ||||| |||||||||| |||||| ||||||||    
T  45112919 ct-aaaattacaaatttttgaaagttagggaggaaaaatgcacttt 45112875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 173 - 329
Target Start/End: Original strand, 45114456 - 45114612
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||||||||  |||||| |||||||||||||||||||||| || |||| ||| |||||||||| | || ||||||||| | || ||||||||||||||     
T  45114456 acacacgtggtgtgccacgtaggcattgaccggtcaaaattaaccaaaatgattaaagttgcaatgaggttaaatctta-gaggccaaaattgtagtttg 45114554  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactt 329  Q
    ||||| ||| |   ||||||||||||||||| ||||||||||| ||||||||||||||    
T  45114555 tgtacatagtgaaccaaaattgcaagtttttgaaagttaggggcggaaaagtgcactt 45114612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 197 - 332
Target Start/End: Complemental strand, 29043536 - 29043400
Alignment:
Q  197 attgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgca 296  Q
    |||||| ||||||||||| | |||| |||||||| | ||||||||||||||||||| |||  ||||||||||||||||||| |||||||||||||| ||     
T  29043536 attgactggtcaaaattgtctaaaaggatcaaagatacaaaggggctaaatcttagagggaaaaaattgtagtttttgtacatagggggtcaaaatcgcg 29043437  T
Q  297 agtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    | ||||| || ||| |||| ||||||||| |||||||    
T  29043436 actttttgaaggttaagggaggaaaagtgaactttag 29043400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 174 - 332
Target Start/End: Complemental strand, 43661427 - 43661267
Alignment:
Q  174 cacacgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||||||||||||||||| || |||||  ||||||| ||||| ||||  | ||||| ||||||||||||||||||||||||| ||||||| |||||||    
T  43661427 cacacgtggcatgccacatatgcgttgacttggtcaaagttgaccaaaagaaccaaagatgcaaaggggctaaatcttagggggccaaaattatagtttt 43661328  T
Q  273 tgtacttagggggtcaaaattgcaa-gtttttaaaagttaggggggaaaagtgcactttag 332  Q
    ||||| || |||  |||||||| ||  ||||||||| | ||||  ||||||||||||||||    
T  43661327 tgtacataagggaccaaaattgtaacttttttaaaattaagggtagaaaagtgcactttag 43661267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 42982593 - 42982756
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaa---gatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagt 269  Q
    |||||||| || | |||||||||| ||||||||||||||||| |||||||   ||||||| ||| ||| ||||||| ||||  |||||||||||||||||    
T  42982593 acacacgtagcgtaccacataggctttgaccggtcaaaattggcaaaaaaaatgatcaaaattgtaaatgggctaattcttgaggggtcaaaattgtagt 42982692  T
Q  270 ttttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    ||||||    |||||| ||||||| ||| ||||||||| || | || |||||||||||||||||    
T  42982693 ttttgtttacagggggccaaaattacaactttttaaaacttaaaggtggaaaagtgcactttag 42982756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 173 - 329
Target Start/End: Original strand, 43661761 - 43661919
Alignment:
Q  173 acacacgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||| ||||||||||||| | || |||||  ||||||||||||  |||| || ||||| |||||  |||| ||||||||||||| ||||||| ||||||    
T  43661761 acacatgtggcatgccacacatgcgttgacttggtcaaaattgatcaaaaggaccaaagatgcaattgggcgaaatcttagggggccaaaattttagttt 43661860  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactt 329  Q
    |||||| ||| || | |||||||||| ||||| |||||| |||| ||||||||||||||    
T  43661861 ttgtacatagaggattaaaattgcaactttttgaaagttaagggtggaaaagtgcactt 43661919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 205 - 332
Target Start/End: Original strand, 11283180 - 11283308
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    |||||||||||| |||| ||||||| ||||||||||||||||| |||||||  |||||||||  ||||| ||| |||||||  |||||| ||| |||||     
T  11283180 gtcaaaattgactaaaatgatcaaaattgcaaaggggctaaattttaggggaccaaaattgtcatttttatacatagggggctaaaattacaactttttg 11283279  T
Q  305 aaagtt-aggggggaaaagtgcactttag 332  Q
    |||||| ||||||| ||| ||||||||||    
T  11283280 aaagttaagggggggaaaatgcactttag 11283308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 204 - 332
Target Start/End: Complemental strand, 24359938 - 24359811
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||| |||  ||  |||| ||||||  |||||||||||||||||||||||||||||||||||||  || | ||  ||||| |||| |||||    
T  24359938 ggtcaaaattgaccaaagtgactaaagatgcaaataggctaaatcttagggggtcaaaattgtagtttttgtatata-gaggcaaaaatcgcaacttttt 24359840  T
Q  304 aaaagttaggggggaaaagtgcactttag 332  Q
    ||||||||| ||| ||||| |||||||||    
T  24359839 aaaagttagagggaaaaagagcactttag 24359811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 18488208 - 18488331
Alignment:
Q  180 tggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtactt 279  Q
    ||||||||||| ||||||||||| |||||||| ||   |||| || ||||| |||||||||| || ||||||| ||| |||||||||||||||||||  |    
T  18488208 tggcatgccacgtaggcattgactggtcaaaactggtcaaaaggaccaaagatgcaaaggggttatatcttagagggccaaaattgtagtttttgtatat 18488307  T
Q  280 agggggtcaaaattgcaagttttt 303  Q
    |||||   |||||||||| |||||    
T  18488308 aggggactaaaattgcaacttttt 18488331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 218 - 317
Target Start/End: Original strand, 24488664 - 24488762
Alignment:
Q  218 aaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagggggg 317  Q
    |||| ||| ||| |||||| |||||||||||||| |||| ||||||||| |||||  || |||||||| ||||||||||||||||| |||||||||||||    
T  24488664 aaaatgatgaaatttgcaatggggctaaatcttacgggg-caaaattgttgttttgatatttagggggccaaaattgcaagtttttgaaagttagggggg 24488762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 226 - 332
Target Start/End: Original strand, 5514263 - 5514368
Alignment:
Q  226 caaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgc 325  Q
    ||||| |||||| ||||||||| |||| || |||||||||||||||||||| ||||  ||  |||||||||||||||| ||| |||||||  ||||||||    
T  5514263 caaagatgcaaatgggctaaattttagagg-tcaaaattgtagtttttgtatttagaaggctaaaattgcaagttttttaaaattaggggataaaagtgc 5514361  T
Q  326 actttag 332  Q
    |||||||    
T  5514362 actttag 5514368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 195 - 331
Target Start/End: Original strand, 40471107 - 40471244
Alignment:
Q  195 gcattgac-cggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaatt 293  Q
    |||||||| |||||||||||||| |||| || ||||| | ||||| || ||||||||| ||||  |||||||||||||||||| |||  ||  |||||||    
T  40471107 gcattgactcggtcaaaattgaccaaaatgaccaaagatacaaagaggttaaatcttaaggggctaaaattgtagtttttgtattta-tggaccaaaatt 40471205  T
Q  294 gcaagtttttaaaagtt-aggggggaaaagtgcacttta 331  Q
    | |||||||| |||||| | |||||||||||||||||||    
T  40471206 gtaagttttttaaagttaaagggggaaaagtgcacttta 40471244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 173 - 313
Target Start/End: Complemental strand, 2379023 - 2378882
Alignment:
Q  173 acacacgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||| ||||||| ||| |||||||   ||||||||||||  |||| || ||||| ||||||  ||||| |||||| |||||||||||| | ||||    
T  2379023 acacacgtgacatgccaaataagcattgatttggtcaaaattgatcaaaaggaccaaagatgcaaataggctagatcttaaggggtcaaaattatggttt 2378924  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttagg 313  Q
    |||||  |||||| ||||||| | || |||||||||||||||    
T  2378923 ttgtatataggggatcaaaatcgtaactttttaaaagttagg 2378882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 269 - 332
Target Start/End: Original strand, 23170034 - 23170096
Alignment:
Q  269 tttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    |||||||||||||||| |||||||||||||||||| ||| ||||||||||||| ||||||||||    
T  23170034 tttttgtacttaggggatcaaaattgcaagtttttgaaaattaggggggaaaa-tgcactttag 23170096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 239 - 320
Target Start/End: Original strand, 5003103 - 5003184
Alignment:
Q  239 gggctaaatcttagggggtcaaaattgtagttttt-gtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaa 320  Q
    |||||||||||||||||  ||||||||| |||||| ||||||||||| | ||||||||||| |||| ||||||||||||||||    
T  5003103 gggctaaatcttagggga-caaaattgtggtttttagtacttaggggtttaaaattgcaagattttgaaagttaggggggaaa 5003184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 235 - 331
Target Start/End: Original strand, 8389690 - 8389787
Alignment:
Q  235 aaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcacttta 331  Q
    ||||||| |||||||||||||   ||||||||||||||||||| || |||  ||||||||||| ||||| ||| || || ||||||||||||||||||    
T  8389690 aaaggggttaaatcttaggggactaaaattgtagtttttgtacataagggaccaaaattgcaactttttgaaacttaagaggggaaaagtgcacttta 8389787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 205 - 275
Target Start/End: Original strand, 34625171 - 34625241
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgt 275  Q
    |||||||||||| |||| |||||||||||| ||| || |||||| |||||||  |||||||||||||||||    
T  34625171 gtcaaaattgaccaaaaggatcaaagttgcgaagagggtaaatcatagggggctaaaattgtagtttttgt 34625241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 332
Target Start/End: Complemental strand, 36249708 - 36249554
Alignment:
Q  179 gtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtact 278  Q
    ||||||||||||| | |||||||| |||||||||||   |||| ||| ||  |||||||||| ||||| | || ||| | ||| ||||  ||||| | |     
T  36249708 gtggcatgccacacatgcattgactggtcaaaattggacaaaaggattaatattgcaaagggcctaaaacataagggattaaatttgtcatttttattca 36249609  T
Q  279 tagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    |||| || ||||||||||| ||||| ||| || ||||||||||||||||||||||    
T  36249608 taggaggccaaaattgcaactttttgaaacttaaggggggaaaagtgcactttag 36249554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 232 - 332
Target Start/End: Complemental strand, 32968559 - 32968458
Alignment:
Q  232 tgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagg-ggggaaaagtgcacttt 330  Q
    ||||||||||||||| | ||| ||| ||||||||| |||||  ||| | ||||| |||||| ||||  |||| ||||||||| |||||||||||||||||    
T  32968559 tgcaaaggggctaaaacatagagggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcacttt 32968460  T
Q  331 ag 332  Q
    ||    
T  32968459 ag 32968458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 232 - 332
Target Start/End: Original strand, 32973934 - 32974035
Alignment:
Q  232 tgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagggggg-aaaagtgcacttt 330  Q
    ||||||||||||||| | ||| ||| ||||||||| |||||  ||| | ||||| |||||| ||||  |||| ||||||||||||| |||||||||||||    
T  32973934 tgcaaaggggctaaaacatagagggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttaggggggaaaaagtgcacttt 32974033  T
Q  331 ag 332  Q
    ||    
T  32974034 ag 32974035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 232 - 332
Target Start/End: Complemental strand, 38974898 - 38974797
Alignment:
Q  232 tgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagg-ggggaaaagtgcacttt 330  Q
    ||||| ||||||||| | ||||||| ||||||||| |||||  ||| | ||||| |||||| ||||  |||| ||||||||| |||||||||||||||||    
T  38974898 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcacttt 38974799  T
Q  331 ag 332  Q
    ||    
T  38974798 ag 38974797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 232 - 332
Target Start/End: Original strand, 38980042 - 38980143
Alignment:
Q  232 tgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta-ggggggaaaagtgcacttt 330  Q
    ||||| ||||||||| | ||||||| ||||||||| |||||  ||| | ||||| |||||| ||||  |||| ||||||| |||||||||||||||||||    
T  38980042 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcacttt 38980141  T
Q  331 ag 332  Q
    ||    
T  38980142 ag 38980143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 232 - 332
Target Start/End: Complemental strand, 39005996 - 39005895
Alignment:
Q  232 tgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagg-ggggaaaagtgcacttt 330  Q
    ||||| ||||||||| | ||||||| ||||||||| |||||  ||| | ||||| |||||| ||||  |||| ||||||||| |||||||||||||||||    
T  39005996 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcacttt 39005897  T
Q  331 ag 332  Q
    ||    
T  39005896 ag 39005895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 232 - 332
Target Start/End: Original strand, 39011139 - 39011240
Alignment:
Q  232 tgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta-ggggggaaaagtgcacttt 330  Q
    ||||| ||||||||| | ||||||| ||||||||| |||||  ||| | ||||| |||||| ||||  |||| ||||||| |||||||||||||||||||    
T  39011139 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcacttt 39011238  T
Q  331 ag 332  Q
    ||    
T  39011239 ag 39011240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 316
Target Start/End: Original strand, 2379894 - 2380004
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||| ||||  | ||||| |||||| | ||||||||||| |||| ||||||||||| ||| |||| || |||| ||||||| ||| |||||    
T  2379894 ggtcaaaattgaccaaaagaaccaaagatgcaaatgagctaaatcttaaggggccaaaattgtag-tttcgtacata-ggggccaaaattacaacttttt 2379991  T
Q  304 aaaagttaggggg 316  Q
     ||||||||||||    
T  2379992 gaaagttaggggg 2380004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 278 - 332
Target Start/End: Complemental strand, 24483200 - 24483145
Alignment:
Q  278 ttagggggtcaaaattgcaagtttttaaaagttagg-ggggaaaagtgcactttag 332  Q
    |||||||| ||||||||||||||||| ||| ||||| |||||||||||||||||||    
T  24483200 ttagggggccaaaattgcaagtttttgaaaattaggaggggaaaagtgcactttag 24483145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 205 - 265
Target Start/End: Complemental strand, 11456739 - 11456679
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattg 265  Q
    |||||||||||| |||| || ||||| ||||| ||||||||||| ||||||| ||||||||    
T  11456739 gtcaaaattgaccaaaaggaccaaagatgcaatggggctaaatcatagggggccaaaattg 11456679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 311
Target Start/End: Complemental strand, 40469471 - 40469364
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||  ||||  | ||||| | ||||||| |||||||||| | ||| ||||||||| |||||||| |||| || | |||||| ||| |||||    
T  40469471 ggtcaaaattgatcaaaagaaccaaagatacaaagggactaaatcttatgtggttaaaattgtaatttttgtatttagaggatgaaaattacaaattttt 40469372  T
Q  304 aaaagtta 311  Q
     |||||||    
T  40469371 gaaagtta 40469364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 279 - 332
Target Start/End: Complemental strand, 11456694 - 11456640
Alignment:
Q  279 tagggggtcaaaattgcaagtttttaaaagttaggggg-gaaaagtgcactttag 332  Q
    ||||||| ||||||||||| ||||| ||| |||||||| ||||||||||||||||    
T  11456694 tagggggccaaaattgcaaatttttgaaaattagggggagaaaagtgcactttag 11456640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 11288914 - 11288959
Alignment:
Q  288 aaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttag 332  Q
    |||||||||||||||| ||||||||||| | |||||||||||||||    
T  11288914 aaaattgcaagtttttgaaagttaggggtgaaaaagtgcactttag 11288959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 282
Target Start/End: Complemental strand, 17844436 - 17844328
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||||||| | |||||  ||||||||||||| ||||||||| | |||| || ||||| |  |||| || ||||| ||| |||  |||||||||||||||    
T  17844436 acacacgtgacgtgccatgtaggcattgaccgatcaaaattggccaaaaggaccaaagatataaagaggttaaatgtta-gggaccaaaattgtagtttt 17844338  T
Q  273 tgtacttagg 282  Q
    ||||| ||||    
T  17844337 tgtacatagg 17844328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 137; Significance: 3e-71; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 31600924 - 31601084
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  31600924 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaggatcaaagttgcaaatgggctaaatcttaaggggtcaaaattgtagtttt 31601023  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttag 332  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  31601024 tgtacttagggggtcaaaattgcaagtttttaaaagttagaggggaaaaagtgcactttag 31601084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 173 - 329
Target Start/End: Complemental strand, 31599951 - 31599794
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||  |||||||||||||||    
T  31599951 acacacgtggcatgccacgtaggcattgaccggtcaaaattggcaaaaaggatcaaagttgcaaaggggctaaatcttaggggaccaaaattgtagtttt 31599852  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttagggggg-aaaagtgcactt 329  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  31599851 tgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcactt 31599794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 174 - 332
Target Start/End: Complemental strand, 21178157 - 21177999
Alignment:
Q  174 cacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttttt 273  Q
    |||||||||| ||||||||||||||||||| |||||||||| |||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  21178157 cacacgtggcgtgccacataggcattgaccagtcaaaattggcaaaaatgatcaaagttgcaaaagggctaaattttagggggtcaaaattgtagttttt 21178058  T
Q  274 gtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    || | |||||| |||||||||||| ||| | ||||||||||||| ||||| ||||||||    
T  21178057 gttcataggggatcaaaattgcaactttatgaaagttagggggggaaagtacactttag 21177999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 175 - 331
Target Start/End: Original strand, 35935474 - 35935631
Alignment:
Q  175 acacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttg 274  Q
    ||||||||| |||||||||||||||||||||||||||||| | |||| ||| |||||||||| | ||||||||||||||||| |||||||||||||| ||    
T  35935474 acacgtggcgtgccacataggcattgaccggtcaaaattggccaaaaggattaaagttgcaatgaggctaaatcttagggggccaaaattgtagtttatg 35935573  T
Q  275 tacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcacttta 331  Q
    |||||||||||  |||||||||| |||||||||||| ||||||| |||||||||||||    
T  35935574 tacttagggggctaaaattgcaaatttttaaaagttaagggggggaaagtgcacttta 35935631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 204 - 332
Target Start/End: Original strand, 19750545 - 19750673
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    |||||||| |||| |||| ||||||| |||||| |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||    
T  19750545 ggtcaaaagtgaccaaaaggatcaaatttgcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagttttt 19750644  T
Q  304 aaaagttaggggggaaaagtgcactttag 332  Q
    |||||||||||||||||||||||||||||    
T  19750645 aaaagttaggggggaaaagtgcactttag 19750673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 204 - 332
Target Start/End: Complemental strand, 19789261 - 19789133
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    |||||||| |||| |||| ||||||| |||||| |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||    
T  19789261 ggtcaaaagtgaccaaaaggatcaaatttgcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagttttt 19789162  T
Q  304 aaaagttaggggggaaaagtgcactttag 332  Q
    |||||||||||||||||||||||||||||    
T  19789161 aaaagttaggggggaaaagtgcactttag 19789133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 1835040 - 1835201
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||||||||| ||| || ||||||  |||||||||| | |||| || ||||| ||||||||||||||||||||||||||||||||||||||||    
T  1835040 acacacgtggcatgccaaataagcgttgaccaagtcaaaattggctaaaaggaccaaagatgcaaaggggctaaatcttagggggtcaaaattgtagttt 1835139  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttaggg-gggaaaagtgcactttag 332  Q
    |  ||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||    
T  1835140 taatacttagggggtcaaaattgcaagtttttgaaagttagggatggaaaagtgcactttag 1835201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 1290136 - 1290297
Alignment:
Q  173 acacacgtggcatgccacataggcattgac-cggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||| |||||||||||| ||||| ||||| |||||||||||||| |||| || ||||| |||||||||| ||||||||||||||  |||||||||||||    
T  1290136 acacatgtggcatgccacttaggcgttgactcggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagggggctaaaattgtagttt 1290235  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    |||||||||| ||| |||||||||||| |||| |||||| ||||||||||||||||||||||    
T  1290236 ttgtacttagagggccaaaattgcaagattttgaaagttaaggggggaaaagtgcactttag 1290297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 13509297 - 13509457
Alignment:
Q  173 acacacgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||| ||||||||||||| | || |||||  ||||||||||| | |||| || ||||| |||||||||||||||||||||||| |||||||||||||||    
T  13509297 acacatgtggcatgccacacatgcgttgacttggtcaaaattggccaaaaggagcaaaggtgcaaaggggctaaatcttaggggatcaaaattgtagttt 13509396  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    |  ||||| ||||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  13509397 tcatacttggggggccaaaattgcaattttttaaaagttaggggggaaaagtacactttag 13509457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 208 - 332
Target Start/End: Original strand, 26421597 - 26421720
Alignment:
Q  208 aaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaa 307  Q
    ||||||||| |||| ||||||| |||||| ||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  26421597 aaaattgactaaaatgatcaaatttgcaatggg-ctaaatcttaaggggtcaaaattgtagtttttgtacttaggaggtcaaaattgcaagtttttgaaa 26421695  T
Q  308 gttaggggggaaaagtgcactttag 332  Q
    ||||| |||||||||||||||||||    
T  26421696 gttagaggggaaaagtgcactttag 26421720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 50909611 - 50909772
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatctt-agggggtcaaaattgtagttt 271  Q
    |||| ||| ||||| ||||||| ||||||||||||||||||||  |||| || ||||| ||||||||||||||||||| |||||||||||||||||||||    
T  50909611 acacgcgttgcatgtcacatagacattgaccggtcaaaattgatcaaaaggaccaaagatgcaaaggggctaaatcttaagggggtcaaaattgtagttt 50909710  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttaggg-gggaaaagtgcactttag 332  Q
    || ||| ||||| |||||||| |||| ||||||||| |||||| || |||||||||||||||    
T  50909711 ttatacatagggagtcaaaatcgcaactttttaaaacttagggtggaaaaagtgcactttag 50909772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 226 - 332
Target Start/End: Complemental strand, 48780357 - 48780250
Alignment:
Q  226 caaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagg-ggggaaaagtg 324  Q
    ||||||||||| ||||||||||||||||||| | ||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  48780357 caaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttaaaagttagggggggaaaagtg 48780258  T
Q  325 cactttag 332  Q
    ||||||||    
T  48780257 cactttag 48780250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 1834283 - 1834121
Alignment:
Q  173 acacacgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtc-aaaattgtagtt 270  Q
    ||||||||||||||||| ||  |||||||   ||||||||||||| |||| || ||||| |||||| |||||||||||||||||| | ||||||||||||    
T  1834283 acacacgtggcatgccaaatcagcattgatttggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttaggggggccaaaattgtagtt 1834184  T
Q  271 tttgtacttagggggtcaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttag 332  Q
    ||| ||| |||||||||||||||| |||||||| |||||||| ||||||||||||||||||||    
T  1834183 tttatacatagggggtcaaaattgtaagttttttaaagttagagggggaaaagtgcactttag 1834121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 186 - 331
Target Start/End: Original strand, 8758789 - 8758935
Alignment:
Q  186 gccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttaggggg 285  Q
    ||||| |||||||||| || ||||||||||| |||| ||| ||| |||||| || ||||||||||| |||| |||||||||||||| |||||||||||||    
T  8758789 gccacgtaggcattgatcgatcaaaattgaccaaaaggattaaaattgcaatggagctaaatcttaaggggccaaaattgtagtttctgtacttaggggg 8758888  T
Q  286 tcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcacttta 331  Q
     ||||||||||||||||| |||||| |||||||||||||||| ||||    
T  8758889 ccaaaattgcaagtttttgaaagttaaggggggaaaagtgcatttta 8758935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 173 - 331
Target Start/End: Complemental strand, 35934504 - 35934347
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||| ||||  || |||||||||| |||||||||||||| |||| ||||||| || |||     
T  35934504 acacacgtgacatgccacgtaggcattgactggtcaaaattgaccaaaagaattaaagttgcaatggggctaaatcttaaggggccaaaattataatttc 35934405  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 331  Q
    | ||||||||||  ||||||| ||||||||| |||||||| ||||||||||||||||||    
T  35934404 tttacttaggggaccaaaattacaagtttttgaaagttag-ggggaaaagtgcacttta 35934347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 204 - 332
Target Start/End: Complemental strand, 25685065 - 25684936
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||  |||| || ||||||||||| ||||||||||||||||||| | ||||||| ||||| |||||||| |||||||||||||||||||||    
T  25685065 ggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagagggtcaaaattgcaagttttt 25684966  T
Q  304 aaaagttagg-ggggaaaagtgcactttag 332  Q
     ||||||||| |||||||||||||||||||    
T  25684965 gaaagttagggggggaaaagtgcactttag 25684936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 204 - 332
Target Start/End: Original strand, 25685792 - 25685921
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    |||||||||||   |||| || ||||||||||| ||||||||||||||||||||| ||||||| ||||| |||||||||||| |||||||||||||||||    
T  25685792 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttagggggtctaaattgtggttttggtacttagggggccaaaattgcaagttttt 25685891  T
Q  304 aaaagttag-gggggaaaagtgcactttag 332  Q
     |||||||| ||||||||||||||||||||    
T  25685892 gaaagttagagggggaaaagtgcactttag 25685921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 52491548 - 52491706
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||||||||  ||||| |||||||||||| |||||||||||| |||| ||| |||||||||| |||||||||| |||||||| ||||||||||||||     
T  52491548 acacacgtggc--gccacgtaggcattgacctgtcaaaattgaccaaaaggattaaagttgcaatggggctaaattttagggggccaaaattgtagtttc 52491645  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    |||| |||| ||  ||||||||||||||||| |||||| |||| |||||||| ||||||||    
T  52491646 tgtatttagaggaccaaaattgcaagtttttgaaagttaagggtggaaaagtacactttag 52491706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 204 - 332
Target Start/End: Complemental strand, 5525490 - 5525362
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    |||||||||||   |||| || ||||||||||| ||||||||||||||||||| | ||||||| ||||| ||||||||||||||||||||||||||||||    
T  5525490 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagttttt 5525391  T
Q  304 aaaagttaggggggaaaagtgcactttag 332  Q
     ||||||||||||||||| || |||||||    
T  5525390 gaaagttaggggggaaaaatgtactttag 5525362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 10448199 - 10448359
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||||||||||||||| ||||||||||| ||||||||||| | |||| || ||||| ||||||||||||| ||||||| ||| |||||||||||||||    
T  10448199 acacacgtggcatgccacgtaggcattgactggtcaaaattggccaaaaggaccaaagatgcaaaggggctatatcttagagggccaaaattgtagtttt 10448298  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttag 332  Q
    ||||| |||||||  ||||| |||| ||||| ||| ||||||| ||  |||||||||||||    
T  10448299 tgtacatagggggctaaaatcgcaactttttgaaacttaggggaggggaagtgcactttag 10448359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 173 - 331
Target Start/End: Complemental strand, 12129786 - 12129626
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||| |||||| ||||| ||||    |||||||||||  |||| || ||||| |||||| ||||||||||||| |||||||||||||||||||    
T  12129786 acacacgtggcctgccacgtaggcgttgaataagtcaaaattgatcaaaatgaccaaagatgcaaatgggctaaatcttaaggggtcaaaattgtagttt 12129687  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcacttta 331  Q
    ||||||||| |||| ||||||||||||||||| |||||| || ||||||||||||||||||    
T  12129686 ttgtacttacggggccaaaattgcaagtttttgaaagttaagaggggaaaagtgcacttta 12129626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 204 - 332
Target Start/End: Original strand, 49307998 - 49308125
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    |||||||||||||  ||| || ||||| |||  |||||| ||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  49307998 ggtcaaaattgacccaaaggaccaaagatgcgcaggggcaaaatcataggggg-caaaattgtagtttttgtacttagggggccaaaattgcaagttttt 49308096  T
Q  304 aaaagttaggggggaaaagtgcactttag 332  Q
     ||||||||||||||||||||||||||||    
T  49308097 gaaagttaggggggaaaagtgcactttag 49308125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 186 - 332
Target Start/End: Complemental strand, 8757822 - 8757677
Alignment:
Q  186 gccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttaggggg 285  Q
    ||||| ||||||||||||| ||||||||||| |||| ||| ||| |||||| |||||||||||||| |||  |||||||||||||| |||||||||||||    
T  8757822 gccacgtaggcattgaccg-tcaaaattgaccaaaaggattaaaattgcaatggggctaaatcttaagggtccaaaattgtagtttctgtacttaggggg 8757724  T
Q  286 tcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
      ||||||| |||||||| ||||||| |||| |||||||||||||||    
T  8757723 ctaaaattgtaagtttttgaaagttaaggggaaaaagtgcactttag 8757677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 204 - 332
Target Start/End: Complemental strand, 10470677 - 10470548
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||  |||| || ||||||||||| ||||||||||||||||||| | |||||||  |||| |||||||| |||||||||||||||||||||    
T  10470677 ggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtgattttggtacttagagggtcaaaattgcaagttttt 10470578  T
Q  304 aaaagtt-aggggggaaaagtgcactttag 332  Q
     |||||| ||||||||||||||||||||||    
T  10470577 gaaagttaaggggggaaaagtgcactttag 10470548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 204 - 332
Target Start/End: Original strand, 10471358 - 10471487
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    |||||||||||   |||| || ||||||||||| ||||||||||||||||||| | ||||||| ||||| |||||||||||| |||||||||||||||||    
T  10471358 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagttttt 10471457  T
Q  304 aaaagtt-aggggggaaaagtgcactttag 332  Q
     |||||| ||||||||||||||||||||||    
T  10471458 gaaagttaaggggggaaaagtgcactttag 10471487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 204 - 331
Target Start/End: Original strand, 37728535 - 37728662
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||| |||| |||||||| |||||||  |||||||||||  |||||||||||||||||||||||| |||| || ||||||||||| |||||    
T  37728535 ggtcaaaattgactaaaaggatcaaagatgcaaagaagctaaatcttaaagggtcaaaattgtagtttttgtacataggaggccaaaattgcaacttttt 37728634  T
Q  304 aaaagttaggggggaaaagtgcacttta 331  Q
    |||||||||| || |||| |||||||||    
T  37728635 aaaagttaggaggaaaaaatgcacttta 37728662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 10447169 - 10447008
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||||||||| |||||| ||||||||||| ||| ||||||  | |||| || ||||| |||||||||||||||||||||||||  |||||||| |||||    
T  10447169 acacacgtggcgtgccacgtaggcattgactggttaaaattagccaaaaggaccaaagatgcaaaggggctaaatcttaggggggtaaaattgtggtttt 10447070  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagtta--ggggggaaaagtgcactttag 332  Q
    ||||| |||||||  |||||||||| ||||| ||| |||   ||||||||||||||||||||    
T  10447069 tgtacatagggggctaaaattgcaactttttgaaacttaagagggggaaaagtgcactttag 10447008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 204 - 332
Target Start/End: Original strand, 5526096 - 5526224
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    |||||||||||   |||| || |||| |||||| ||||||||||||||||||| | ||||||| |||||  ||||||||||| |||||||||||||||||    
T  5526096 ggtcaaaattggtcaaaaggaccaaaattgcaatggggctaaatcttaggggggctaaattgtggttttgttacttagggggccaaaattgcaagttttt 5526195  T
Q  304 aaaagttaggggggaaaagtgcactttag 332  Q
     |||||||| |||||||||||||||||||    
T  5526196 gaaagttagaggggaaaagtgcactttag 5526224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 17388149 - 17388309
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||| ||||| |||||| ||||||  ||||||||||||  ||| ||  |   ||| ||||||||||| |||| ||||| ||||||||||||||    
T  17388149 acacacgtggcctgccatataggcgttgaccaagtcaaaattgacctaaaggactactattgtaaaggggctaattcttggggggccaaaattgtagttt 17388248  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
     |||||||| |||  ||||||||||||||||| ||||||||||||||||||||||||||||    
T  17388249 atgtacttaagggaccaaaattgcaagtttttgaaagttaggggggaaaagtgcactttag 17388309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 204 - 332
Target Start/End: Original strand, 13386502 - 13386632
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    |||||||||||   |||| || ||||||||||| ||||||| ||||||||||| | ||||||| ||||| ||||||| ||||||||||||||||||||||    
T  13386502 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctagatcttaggggggctaaattgtggttttggtacttatggggtcaaaattgcaagttttt 13386601  T
Q  304 aaaagttagggggg--aaaagtgcactttag 332  Q
     |||||||||||||  |||||||||||||||    
T  13386602 gaaagttagggggggaaaaagtgcactttag 13386632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 231 - 332
Target Start/End: Complemental strand, 17383096 - 17382995
Alignment:
Q  231 ttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcacttt 330  Q
    ||||||||||| ||| |||| ||||| ||||||||||||||||||||||| |||  ||||||||||||||||| ||||||||||| ||||||||||||||    
T  17383096 ttgcaaaggggataattcttggggggccaaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagttaggggagaaaagtgcacttt 17382997  T
Q  331 ag 332  Q
    ||    
T  17382996 ag 17382995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 205 - 331
Target Start/End: Complemental strand, 8155867 - 8155741
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggg-gtcaaaattgcaagttttt 303  Q
    |||||| ||||| |||| ||  |||| ||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| |  ||||||||||||||||    
T  8155867 gtcaaagttgaccaaaatgactaaagatgcaaagcggctaaatcttagggggccaaaattgtagtttttgaacttaggggagctaaaattgcaagttttt 8155768  T
Q  304 aaaagttaggggggaaaagtgcacttta 331  Q
     ||||||| |||||||||||||||||||    
T  8155767 gaaagtta-gggggaaaagtgcacttta 8155741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 231 - 332
Target Start/End: Complemental strand, 1963300 - 1963198
Alignment:
Q  231 ttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactt 329  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||| |||| || ||||||||||| ||||| |||||| |||||||||||||||||||    
T  1963300 ttgcaaaggggctaattcttagggggctaaaattgtagtttttgtacataggaggccaaaattgcaactttttgaaagttaaggggggaaaagtgcactt 1963201  T
Q  330 tag 332  Q
    |||    
T  1963200 tag 1963198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 204 - 332
Target Start/End: Complemental strand, 13386147 - 13386016
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtca-aaattgtagtttttgtacttagggggtcaaaattgcaagt-tt 301  Q
    ||||||||||||  |||| || ||||||||||| | |||||||||||||||||  | ||||||| ||||| |||||||||||| ||||||||||||| ||    
T  13386147 ggtcaaaattgatcaaaaggaccaaagttgcaatgaggctaaatcttagggggggataaattgtggttttggtacttagggggccaaaattgcaagtttt 13386048  T
Q  302 ttaaaagttag-gggggaaaagtgcactttag 332  Q
    || |||||||| ||||||||||||||||||||    
T  13386047 ttgaaagttagagggggaaaagtgcactttag 13386016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 175 - 331
Target Start/End: Complemental strand, 1289258 - 1289100
Alignment:
Q  175 acacgtggcatgccacataggcattgac-cggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttttt 273  Q
    |||||||||||||||| || || ||||| |||||||||||||| |||| || ||||| ||||| |||| ||||||||| | ||  |||||||||||||||    
T  1289258 acacgtggcatgccacttaagcgttgactcggtcaaaattgaccaaaaggaccaaagatgcaagggggttaaatcttaagaggctaaaattgtagttttt 1289159  T
Q  274 gtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcacttta 331  Q
     ||||||| || |||||||| ||| | ||| |||||| ||||||||||||| |||||||    
T  1289158 atacttagaggatcaaaattacaaatatttgaaagttaaggggggaaaagttcacttta 1289100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 232 - 324
Target Start/End: Original strand, 21539069 - 21539162
Alignment:
Q  232 tgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtg 324  Q
    |||||||| |||||||||||||||||||||||||||||||||  ||||||| || ||||||||||||||||||||| || |||| |||||||||    
T  21539069 tgcaaaggagctaaatcttagggggtcaaaattgtagtttttacacttaggaggccaaaattgcaagtttttaaaaattaagggtggaaaagtg 21539162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 234 - 331
Target Start/End: Original strand, 27257960 - 27258057
Alignment:
Q  234 caaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 331  Q
    |||||||||||||||||| ||||| ||||||| ||||||||||  ||| ||||||||||||||| ||||||||||||| ||||  |||||||| ||||    
T  27257960 caaaggggctaaatcttaaggggttaaaattggagtttttgtatatagagggtcaaaattgcaactttttaaaagttaaggggagaaagtgcatttta 27258057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 205 - 326
Target Start/End: Original strand, 46638696 - 46638817
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    |||||||||||  |||||||  |||||||||||||| |||||||||||||||  ||||||||| ||||||| | |||||| |||||||| ||| |||||     
T  46638696 gtcaaaattgatcaaaaagactaaagttgcaaagggactaaatcttagggggctaaaattgtaatttttgttcataggggatcaaaattccaactttttg 46638795  T
Q  305 aaagttaggggggaaaagtgca 326  Q
    ||||||| || |||||| ||||    
T  46638796 aaagttaaggaggaaaaatgca 46638817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 226 - 332
Target Start/End: Original strand, 48781038 - 48781144
Alignment:
Q  226 caaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttag-gggggaaaagtg 324  Q
    ||||||||||| |||||||||| |||||||| | ||||||| ||||| ||||||| |||  ||||||||||| ||||| |||||||| ||||||||||||    
T  48781038 caaagttgcaatggggctaaattttaggggggctaaattgtggttttagtactta-gggaccaaaattgcaaatttttgaaagttagagggggaaaagtg 48781136  T
Q  325 cactttag 332  Q
    ||||||||    
T  48781137 cactttag 48781144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 1964379 - 1964540
Alignment:
Q  173 acacacgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||||||||| ||  || |||||  |||||||||||  ||||| || ||   | ||||||||| ||| ||||| |||  ||||||||||||||    
T  1964379 acacacgtggcatgccaaatcagcgttgacttggtcaaaattgctaaaaaggaccactatcgcaaaggggataattcttaagggaccaaaattgtagttt 1964478  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    |||| | ||||||| |||||||| || |||||||||||| |||| |||||||||||||||||    
T  1964479 ttgttcatagggggccaaaattgtaactttttaaaagttaagggtggaaaagtgcactttag 1964540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 31600758 - 31600805
Alignment:
Q  8 gttttgagaggaagagatgatgaagaagaagaaataaaagattgaggg 55  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31600758 gttttgagaggaagagatgatgaagaagaagaaataaaagattgaggg 31600805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 205 - 332
Target Start/End: Complemental strand, 49306903 - 49306777
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    ||||||||||| ||||| || ||||| ||||||  | ||||||| ||  ||| |||||||||||||||||||||||   || |||||||||||||||||     
T  49306903 gtcaaaattgataaaaaggaccaaagatgcaaaatgactaaatcatattggg-caaaattgtagtttttgtacttaaatggccaaaattgcaagtttttg 49306805  T
Q  305 aaagttaggggggaaaagtgcactttag 332  Q
    |||||| ||||  |||||||||||||||    
T  49306804 aaagttgggggaaaaaagtgcactttag 49306777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 233 - 332
Target Start/End: Complemental strand, 14868990 - 14868892
Alignment:
Q  233 gcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    |||| |||||||| ||||||||||  ||| |||| |||||  ||||||| ||| |||||||||||| |||| |||| |||||||||||||||||||||||    
T  14868990 gcaatggggctaattcttagggggggaaa-ttgtggttttgatacttagcgggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 14868892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 233 - 332
Target Start/End: Original strand, 14876944 - 14877042
Alignment:
Q  233 gcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    |||| |||||||| ||||||||||  ||| |||| |||||  ||||||| ||| |||||||||||| |||| |||| |||||||||||||||||||||||    
T  14876944 gcaatggggctaattcttagggggggaaa-ttgtggttttgatacttagcgggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 14877042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 252 - 331
Target Start/End: Original strand, 55603549 - 55603628
Alignment:
Q  252 gggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 331  Q
    ||||| |||||| |||||||||||||  ||||| | |||||||||||||||| ||||||| |||| ||||||||||||||    
T  55603549 gggggccaaaatagtagtttttgtacacaggggattaaaattgcaagtttttgaaagttaaggggaaaaagtgcacttta 55603628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 175 - 264
Target Start/End: Original strand, 8896851 - 8896940
Alignment:
Q  175 acacgtggcatgccacataggcattgac-cggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaatt 264  Q
    |||||||||||||||| ||||| ||||| |||||||||||||| |||||| ||||  ||||||||||||||||||||| |||  |||||||    
T  8896851 acacgtggcatgccacttaggcgttgactcggtcaaaattgaccaaaaag-tcaatattgcaaaggggctaaatcttaagggaccaaaatt 8896940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 231 - 313
Target Start/End: Original strand, 33310086 - 33310168
Alignment:
Q  231 ttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagg 313  Q
    |||||||| ||||||||| ||| ||| ||||||| ||||||||||| |||||| |  |||||| |||||||||||||||||||    
T  33310086 ttgcaaagaggctaaatcatagagggccaaaattatagtttttgtatttagggagctaaaattacaagtttttaaaagttagg 33310168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 46637845 - 46637684
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattg--acaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtt 270  Q
    ||||| |||||||||||| |||||||||||||||||||||||  | ||||| || ||||  ||||||  |  ||| | ||| |||  |||||||||||||    
T  46637845 acacatgtggcatgccacgtaggcattgaccggtcaaaattggaaaaaaaatgaccaaatatgcaaattgattaattattaagggaccaaaattgtagtt 46637746  T
Q  271 tttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    ||||||| ||||| |  |||||  |||||||||||||||| || |||   ||||||||||||    
T  46637745 tttgtacatagggagctaaaatcacaagtttttaaaagttcggaggggggagtgcactttag 46637684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 242 - 332
Target Start/End: Complemental strand, 50909365 - 50909275
Alignment:
Q  242 ctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    |||||||||||| ||| ||||||||||||||| ||  |||| |||||||||||||| ||||||||| |||||||  |||| | ||||||||    
T  50909365 ctaaatcttaggaggttaaaattgtagtttttatatataggaggtcaaaattgcaactttttaaaacttaggggaaaaaaatacactttag 50909275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 232 - 332
Target Start/End: Original strand, 3928856 - 3928957
Alignment:
Q  232 tgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta-ggggggaaaagtgcacttt 330  Q
    ||||||||||||||| | ||| ||| ||||||||| |||||  ||| ||||||| |||||| ||||  |||| ||||||| |||||||||||||||||||    
T  3928856 tgcaaaggggctaaaacatagagggccaaaattgtggttttcatacatagggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcacttt 3928955  T
Q  331 ag 332  Q
    ||    
T  3928956 ag 3928957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 232 - 332
Target Start/End: Complemental strand, 3927769 - 3927668
Alignment:
Q  232 tgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttag-gggggaaaagtgcacttt 330  Q
    |||||| |||||||| | ||| ||  |||||||||||||||  ||| | ||||| |||||| ||||  ||||||||||||| ||||||||||||||||||    
T  3927769 tgcaaatgggctaaaacatagaggaccaaaattgtagttttcatacatggggggccaaaatcgcaacattttaaaagttagagggggaaaagtgcacttt 3927670  T
Q  331 ag 332  Q
    ||    
T  3927669 ag 3927668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 276
Target Start/End: Complemental strand, 37727827 - 37727755
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgta 276  Q
    ||||||||||||| |||| || ||||| | ||||| | |||||||||| ||||| ||||||||||||||||||    
T  37727827 ggtcaaaattgactaaaatgaccaaagatacaaagagactaaatcttaaggggttaaaattgtagtttttgta 37727755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 54108021 - 54107949
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaa 245  Q
    ||||||||||| |||||  ||||||||||| ||| ||||||| | ||||||| ||||| ||||||||||||||    
T  54108021 acacacgtggcgtgccatgtaggcattgactggttaaaattggccaaaaagaccaaagatgcaaaggggctaa 54107949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 514
Target Start/End: Original strand, 31846896 - 31846952
Alignment:
Q  458 tgtgacattgtggttggcctatgtcatcgatgtcattaaccacaatgtcacccaagt 514  Q
    ||||||||||||||||||| || ||| | ||||||  ||||||||||||||||||||    
T  31846896 tgtgacattgtggttggccaatatcaccaatgtcaccaaccacaatgtcacccaagt 31846952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 54110635 - 54110707
Alignment:
Q  241 gctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagg 313  Q
    ||||||| ||||||||  |||||| || ||||||||| | || |||||||||||||| ||||| |||||||||    
T  54110635 gctaaattttagggggctaaaattataatttttgtacattggaggtcaaaattgcaaattttttaaagttagg 54110707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 33997851 - 33997916
Alignment:
Q  231 ttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaa 297  Q
    |||||||||||||||||||||||||| ||||||| |  ||||| |  ||||||||||||||| ||||    
T  33997851 ttgcaaaggggctaaatcttaggggg-caaaattttcattttttttattagggggtcaaaatcgcaa 33997916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 514
Target Start/End: Complemental strand, 15032039 - 15031970
Alignment:
Q  445 tttttgttacacttgtgacattgtggttggcctatgtcatcgatgtcattaaccacaatgtcacccaagt 514  Q
    ||||| |||||||| ||| ||||||||||| | ||||||   || |||| ||||||||||||||||||||    
T  15032039 ttttttttacacttatgatattgtggttggtcaatgtcacgaatatcatcaaccacaatgtcacccaagt 15031970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 259 - 331
Target Start/End: Complemental strand, 55602451 - 55602379
Alignment:
Q  259 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 331  Q
    ||||||||||||||| ||  ||| ||   |||||||||||||||| |||||||  |||||||| |||||||||    
T  55602451 aaaattgtagtttttatatatagaggactaaaattgcaagtttttgaaagttaaaggggaaaaatgcacttta 55602379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 133; Significance: 8e-69; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 54540729 - 54540889
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  54540729 acacacgtggcatgccacgtaggcattgaccggtcaaaattgacaaaaaggatcaaagttgcaaaggggctaaatcttagggggccaaaattgtagtttt 54540828  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    |||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  54540829 tgtacttaaggggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttag 54540889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 173 - 331
Target Start/End: Complemental strand, 7267805 - 7267647
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||||||||| |||||  || |||||||||||||||||||||| |||| ||| |||||||||| | ||||||||||||||||| ||||||||||||||     
T  7267805 acacacgtggcgtgccatgtatgcattgaccggtcaaaattgaccaaaaggattaaagttgcaatgaggctaaatcttagggggccaaaattgtagtttc 7267706  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 331  Q
    ||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||    
T  7267705 tgtacttagggggccaaaattgcaagtttttgaaagttaagggggaaaagtgcacttta 7267647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 54539917 - 54539757
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||||||||||||||| || || |||||| |||||||||| |||||| ||||||||||||||| | ||||||||||||||| ||||||||||||||||    
T  54539917 acacacgtggcatgccacgtatgctttgaccagtcaaaattggcaaaaaggatcaaagttgcaaatgagctaaatcttaggggatcaaaattgtagtttt 54539818  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    |||| ||||||||| |||||||||||||||| |||||| |||| |||||||||||||||||    
T  54539817 tgtatttagggggttaaaattgcaagtttttgaaagttaagggtggaaaagtgcactttag 54539757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 19985011 - 19984851
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||| |||||||||||| ||||||||||| ||||||||||||| |||| || ||||| |||||||||| |||||||||  |||||||||||||||||||    
T  19985011 acacatgtggcatgccacgtaggcattgactggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagggtcaaaattgtagtttt 19984912  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttag 332  Q
    ||||| ||||||| ||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  19984911 tgtacatagggggccaaaattgcaagtttttgaaacttagggggggaaaagtgcactttag 19984851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 22776751 - 22776911
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||||||||||||||| |||||||||||||||||||||||  ||||  || ||||  |||||||||||||| |||||||||| |||||||||||||||    
T  22776751 acacacgtggcatgccacgtaggcattgaccggtcaaaattgggaaaatggaccaaatatgcaaaggggctaattcttagggggccaaaattgtagtttt 22776850  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttag 332  Q
    ||||| ||||||| ||||||||||| ||| | ||||||||||| |||||||||||||||||    
T  22776851 tgtacatagggggccaaaattgcaactttctgaaagttaggggtggaaaagtgcactttag 22776911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 173 - 331
Target Start/End: Original strand, 7268766 - 7268924
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||||||||| |||||| || |||||||||||||||||||||  |||| ||| ||| |||||| ||| |||||||||||| || ||||||||||||||     
T  7268766 acacacgtggcgtgccacgtaagcattgaccggtcaaaattgatcaaaaggattaaaattgcaatgggactaaatcttaggaggccaaaattgtagtttc 7268865  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 331  Q
    | |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||    
T  7268866 tatacttaggaggccaaaattgcaagtttttgaaagttaggggggaaaagtgcacttta 7268924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 8456640 - 8456480
Alignment:
Q  173 acacacgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||||||||||  |||| |||||  ||||||||||||| |||| ||||||| |||||| | ||||||||||||||||| ||||||||||||||    
T  8456640 acacacgtggcatgccacgcaggcgttgactaggtcaaaattgactaaaaggatcaaatttgcaatgaggctaaatcttagggggccaaaattgtagttt 8456541  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    ||||| |||||||  ||||||||||||||||| ||| |||||||| |||||||||||||||    
T  8456540 ttgtatttaggggaccaaaattgcaagtttttgaaaattagggggaaaaagtgcactttag 8456480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 175 - 332
Target Start/End: Complemental strand, 7758563 - 7758404
Alignment:
Q  175 acacgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttttt 273  Q
    |||||||||||||||| || || |||||  ||||||||||||| |||| || ||||| | |||||||| ||||||||||||||  |||||||||||||||    
T  7758563 acacgtggcatgccacttaagcgttgactaggtcaaaattgaccaaaaggaccaaagatacaaaggggttaaatcttagggggcaaaaattgtagttttt 7758464  T
Q  274 gtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    |||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||    
T  7758463 gtacttagggggtcaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttag 7758404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 12700336 - 12700177
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||| |||||| ||||| ||||    |||||||||||| |||| || ||||| ||||| | ||||||||| ||||||||||||||||||||||    
T  12700336 acacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaatgtggctaaatcatagggggtcaaaattgtagttt 12700237  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  12700236 ttgtacttagggggccaaaattgcaagtttttgaaagttagggggg-aaagtgcactttag 12700177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 19986009 - 19986171
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||||||||||||||| ||||||||||| |||||||||||||  ||| || ||||| |||||||||| |||||||||| |||||||||||||||||||    
T  19986009 acacacgtggcatgccacgtaggcattgactggtcaaaattgaccgaaatgaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtagtttt 19986108  T
Q  273 tgtacttag--ggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    | ||| |||  |||| ||||||||||||||||| ||| || || |||||||||||||||||||    
T  19986109 tatacataggaggggccaaaattgcaagtttttgaaacttaagaggggaaaagtgcactttag 19986171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 49216409 - 49216249
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||||||| |||||||| ||| |||||| |||||||||||| | |||| |||||||| |||||| | ||||||||||| |||| || ||||||||||||    
T  49216409 acacacgtgacatgccacgtagacattgatcggtcaaaattggccaaaatgatcaaagatgcaaatgagctaaatcttaaggggacataattgtagtttt 49216310  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttagg-ggggaaaagtgcactttag 332  Q
    ||||| ||||||||||||||||||| ||||| ||| ||||| | |||||||||||||||||    
T  49216309 tgtacatagggggtcaaaattgcaactttttgaaacttaggcgtggaaaagtgcactttag 49216249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 29931389 - 29931228
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    |||||||||| |||||| | |||| ||||| | |||||||||||| |||| ||  |   ||||||||||| |||||||||||||| ||||||||||||||    
T  29931389 acacacgtggaatgccatacaggcgttgactgtgtcaaaattgaccaaaaggactattattgcaaaggggttaaatcttagggggccaaaattgtagttt 29931290  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttag 332  Q
    ||||| ||||||||  |||||||||||||||| ||||||||||| |||||||||||||||||    
T  29931289 ttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttag 29931228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 29980543 - 29980382
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    |||||||||| |||||| | |||| ||||| | |||||||||||| |||| ||  |   ||||||||||| |||||||||||||| ||||||||||||||    
T  29980543 acacacgtggaatgccatacaggcgttgactgtgtcaaaattgaccaaaaggactattattgcaaaggggttaaatcttagggggccaaaattgtagttt 29980444  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttag 332  Q
    ||||| ||||||||  |||||||||||||||| ||||||||||| |||||||||||||||||    
T  29980443 ttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttag 29980382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 47609860 - 47609699
Alignment:
Q  173 acacacgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||| ||||||||||| || ||| |||||  |||||||||||   |||| || ||||||||||| |||||||||||||||||||   ||||||| ||||    
T  47609860 acacatgtggcatgccaaattggcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttt 47609761  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttagg-ggggaaaagtgcactttag 332  Q
    | |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||    
T  47609760 tggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcattttag 47609699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 204 - 331
Target Start/End: Original strand, 47610550 - 47610678
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    |||||||||||   |||| || ||||||||||| ||||||||||||||||||| | ||||||| ||||| |||||||||||| |||||||||||||||||    
T  47610550 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagttttt 47610649  T
Q  304 aaaagttag-gggggaaaagtgcacttta 331  Q
     |||||||| |||||||||||||||||||    
T  47610650 gaaagttagagggggaaaagtgcacttta 47610678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 196 - 332
Target Start/End: Original strand, 55191957 - 55192093
Alignment:
Q  196 cattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgc 295  Q
    |||| |||| |||||||||||||||| ||||||| ||||||||||| ||| ||||  |||| |||||||||||||||||||||||| ||| |||||||||    
T  55191957 cattaaccgatcaaaattgacaaaaatgatcaaaattgcaaaggggttaattcttgaggggccaaaattgtagtttttgtacttagagggccaaaattgc 55192056  T
Q  296 aagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    |||||||| ||||||| ||||| ||| | ||||||||    
T  55192057 aagtttttgaaagttaaggggggaaaatacactttag 55192093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 231 - 332
Target Start/End: Original strand, 29932696 - 29932797
Alignment:
Q  231 ttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttag-gggggaaaagtgcactt 329  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||| |||||||||||||||||    
T  29932696 ttgcaaagggactaaatcttaaggggtcaaaattgtagtttttgtactta-ggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactt 29932794  T
Q  330 tag 332  Q
    |||    
T  29932795 tag 29932797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 231 - 332
Target Start/End: Original strand, 29981850 - 29981951
Alignment:
Q  231 ttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttag-gggggaaaagtgcactt 329  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||| |||||||||||||||||    
T  29981850 ttgcaaagggactaaatcttaaggggtcaaaattgtagtttttgtactta-ggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactt 29981948  T
Q  330 tag 332  Q
    |||    
T  29981949 tag 29981951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 175 - 332
Target Start/End: Complemental strand, 52839197 - 52839039
Alignment:
Q  175 acacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttg 274  Q
    ||||||||| | |||||||||| ||||||||||||||||||| |||| ||| ||| |||||| |||||||||| |||| |||  |||||||| ||||| |    
T  52839197 acacgtggcgtaccacataggctttgaccggtcaaaattgaccaaaaggatgaaatttgcaatggggctaaattttagaggggtaaaattgttgttttgg 52839098  T
Q  275 tacttagggggtcaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttag 332  Q
    ||||||| ||||||||||| ||| |||||  ||||||| ||||||||| ||||||||||    
T  52839097 tacttagagggtcaaaattacaaatttttggaagttagagggggaaaattgcactttag 52839039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 204 - 332
Target Start/End: Original strand, 46721190 - 46721319
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||| | || || ||||  ||||||||||||||||||||||||   ||||||||||||||||||| |||||||| ||||| |||| |||||    
T  46721190 ggtcaaaattgaccagaaggaccaaatatgcaaaggggctaaatcttaggggactaaaattgtagtttttgtacatagggggttaaaatcgcaacttttt 46721289  T
Q  304 aaaagttaggggg-gaaaagtgcactttag 332  Q
    ||||||||||||| ||||||||||||||||    
T  46721290 aaaagttagggggagaaaagtgcactttag 46721319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 204 - 332
Target Start/End: Complemental strand, 51470103 - 51469974
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||  |||| || ||||||||||| |||||||||||||||||||   ||||||| ||||| |||||||||||| |||||||||||||||||    
T  51470103 ggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggccaaaattgcaagttttt 51470004  T
Q  304 aaaagttaggg-gggaaaagtgcactttag 332  Q
     ||| |||||| ||||||||||||||||||    
T  51470003 gaaaattagggagggaaaagtgcactttag 51469974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 204 - 332
Target Start/End: Original strand, 51470425 - 51470553
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||  |||| || ||||||||||| || |||||||||||||||  | ||||||| ||||| ||||||||||| || |||||||||||||||    
T  51470425 ggtcaaaattgatcaaaaggaccaaagttgcaatggagctaaatcttaggggtgctaaattgtggttttggtacttaggggatctaaattgcaagttttt 51470524  T
Q  304 aaaagttaggggggaaaagtgcactttag 332  Q
     ||||||||||||||| ||||||||||||    
T  51470525 gaaagttaggggggaagagtgcactttag 51470553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 173 - 308
Target Start/End: Complemental strand, 31645135 - 31645000
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||||||| |||| ||||||| | |||||||||||||||||   |||| || ||||| |||||| ||||||||||||||| ||| ||||||||||||||    
T  31645135 acacacgtgacatgacacatagacgttgaccggtcaaaattggtcaaaaggaccaaagatgcaaatgggctaaatcttaggaggttaaaattgtagtttt 31645036  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaag 308  Q
    || |||||||||| |||||||| |||||||| ||||    
T  31645035 tgcacttagggggccaaaattgtaagtttttgaaag 31645000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 226 - 332
Target Start/End: Original strand, 12703492 - 12703598
Alignment:
Q  226 caaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgc 325  Q
    ||||| ||||| ||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||| ||| ||||| |||||||| ||| ||||||||    
T  12703492 caaagatgcaatggggctaaatcatagggggccaaaattgtagtttttgtacttagggggccaaaattacaaatttttgaaagttagagggaaaaagtgc 12703591  T
Q  326 actttag 332  Q
    |||||||    
T  12703592 actttag 12703598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 185 - 331
Target Start/End: Original strand, 54986958 - 54987103
Alignment:
Q  185 tgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggg 284  Q
    ||||||||||  |||||||||||||||||| | |||| |||||||| |||||||| |||||||||||| ||||||||||| |||||||| ||| ||||||    
T  54986958 tgccacatagaaattgaccggtcaaaattggccaaaatgatcaaagatgcaaaggagctaaatcttagagggtcaaaattatagtttttatacatagggg 54987057  T
Q  285 gtcaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 331  Q
       ||||| |||| ||||| ||| ||| |||||||||||||||||||    
T  54987058 actaaaatcgcaactttttgaaactta-gggggaaaagtgcacttta 54987103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 47614348 - 47614187
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||| |||||| ||||| ||||    ||||||||| || ||||  | ||||| ||||||| ||||||||||||||||| ||||||||| ||||    
T  47614348 acacacgtggcctgccacgtaggcgttgaataagtcaaaattaaccaaaagcaccaaagatgcaaagaggctaaatcttagggggccaaaattgttgttt 47614249  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttag 332  Q
    |  ||||||||||| ||||||||||||||||| |||||||| |||| |||||||||||||||    
T  47614248 tgatacttagggggccaaaattgcaagtttttgaaagttagaggggaaaaagtgcactttag 47614187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 185 - 332
Target Start/End: Original strand, 52840554 - 52840703
Alignment:
Q  185 tgccacataggcattgac-cggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttaggg 283  Q
    ||||||||| || ||||| ||||||||||| || |||| ||| ||| |||||| ||||||||||||||||||| ||||||||| |||||  || ||||||    
T  52840554 tgccacataagcgttgactcggtcaaaattaaccaaaatgataaaatttgcaatggggctaaatcttagggggacaaaattgttgttttgataattaggg 52840653  T
Q  284 ggtcaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttag 332  Q
     | ||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  52840654 agccaaaattgcaagtttttgaaagttaggggaggaaaagggcactttag 52840703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 205 - 332
Target Start/End: Complemental strand, 534629 - 534501
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    |||||||||| | |||  || ||||| ||||||  ||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||     
T  534629 gtcaaaattggccaaatggaccaaagatgcaaataggctaaatcttagggggccaaaattgtagtttttgtacataggaggtcaaaattgcaagtttttg 534530  T
Q  305 aaagttag-gggggaaaagtgcactttag 332  Q
    | |||||| |||| |||||||||||||||    
T  534529 agagttagaggggaaaaagtgcactttag 534501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 233 - 330
Target Start/End: Complemental strand, 24516562 - 24516464
Alignment:
Q  233 gcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagggggg-aaaagtgcacttt 330  Q
    ||||||| ||||||||||| |||| |||||||||||||||| ||||||||| | ||||||||||||||||| ||||||||||||| |||||||||||||    
T  24516562 gcaaaggagctaaatcttaaggggccaaaattgtagtttttatacttagggtgccaaaattgcaagttttttaaagttaggggggaaaaagtgcacttt 24516464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 51038728 - 51038889
Alignment:
Q  173 acacacgtggcatgccacataggcattgac-cggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||||||||| ||  || ||||| ||||||||||||  ||||| || ||   |||||||||||  || ||||| |||  ||||||||||||||    
T  51038728 acacacgtggcatgccaaatcagcgttgactcggtcaaaattgctaaaaaggaccactattgcaaaggggacaattcttaagggaccaaaattgtagttt 51038827  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    |||| | ||||||||||||||||||| |||||||||||| |||| |||||||||||||||||    
T  51038828 ttgttcatagggggtcaaaattgcaactttttaaaagttaagggtggaaaagtgcactttag 51038889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 232 - 332
Target Start/End: Complemental strand, 51037638 - 51037538
Alignment:
Q  232 tgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 331  Q
    |||||||||||||| ||||||||||  ||||||||||||||||| | ||| ||||||||||||||| ||||| ||||||| ||| |||||||||||||||    
T  51037638 tgcaaaggggctaattcttagggggctaaaattgtagtttttgttcatagagggtcaaaattgcaactttttgaaagttaagggagaaaagtgcacttta 51037539  T
Q  332 g 332  Q
    |    
T  51037538 g 51037538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 34019117 - 34019232
Alignment:
Q  206 tcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaa 305  Q
    ||||||||||| |||| || ||||| |||||| | ||||||| |||||||  |||||||||||| ||||||| ||||||||||||||||||||||||| |    
T  34019117 tcaaaattgaccaaaaggaccaaagatgcaaatgagctaaattttaggggaccaaaattgtagtgtttgtacctagggggtcaaaattgcaagtttttga 34019216  T
Q  306 aagttaggggggaaaa 321  Q
    |||||| |||| ||||    
T  34019217 aagttaaggggaaaaa 34019232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 173 - 311
Target Start/End: Complemental strand, 4271602 - 4271464
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||| ||||| || || |||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |  |  ||||||||||||||    
T  4271602 acacatgtggcgtgtcatatagacattgaccggtcaaaattgacaaaaaggatcaaagttgcaaatgggctaaatcttaagatgctaaaattgtagtttt 4271503  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagtta 311  Q
    | || ||| | | |||||||| ||| ||||| |||||||    
T  4271502 tatatttaagagatcaaaattacaaatttttgaaagtta 4271464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 206 - 332
Target Start/End: Original strand, 11671313 - 11671439
Alignment:
Q  206 tcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaa 305  Q
    ||||||||||  |||| || ||||| || ||||||| |||||| ||||||||||||  |||||||||| || ||||||||  |||||||||||||||| |    
T  11671313 tcaaaattgatcaaaaggaccaaagatgtaaaggggttaaatcatagggggtcaaatctgtagtttttatatttagggggctaaaattgcaagtttttga 11671412  T
Q  306 aagttaggggggaaaagtgcactttag 332  Q
    |||||||| || |||||||||||||||    
T  11671413 aagttaggcggaaaaagtgcactttag 11671439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 233 - 332
Target Start/End: Original strand, 5029682 - 5029781
Alignment:
Q  233 gcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    |||| |||||||| ||||||||||  |||||||| ||||| ||||||||| || |||||||||||| |||| |||| |||||||||||||||||||||||    
T  5029682 gcaatggggctaattcttaggggggaaaaattgtggttttggtacttaggaggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 5029781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 174 - 331
Target Start/End: Original strand, 23770346 - 23770505
Alignment:
Q  174 cacacgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||||||||||||||||| || |||||  ||||||| ||||| |||| ||  |||| |||||||||| ||||||||||||||  ||||||||||||||    
T  23770346 cacacgtggcatgccacatatgcgttgacttggtcaaagttgaccaaaaggactaaagatgcaaaggggttaaatcttagggggctaaaattgtagtttt 23770445  T
Q  273 tgtacttagggggtcaaaattgcaa-gtttttaaaagttaggggggaaaagtgcacttta 331  Q
    ||||| || |||  |||||||| ||  ||||||||| | ||||| ||||| |||||||||    
T  23770446 tgtacataagggaccaaaattgtaacttttttaaaattaaggggagaaaattgcacttta 23770505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 206 - 332
Target Start/End: Complemental strand, 46720070 - 46719943
Alignment:
Q  206 tcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaa 305  Q
    ||||||||||| |||| || ||||  |||||| |||||||||||||| ||   ||||||||||||||| ||| ||||||| |||||| |||| |||||||    
T  46720070 tcaaaattgaccaaaaggaccaaatatgcaaatgggctaaatcttagaggactaaaattgtagtttttatacatagggggccaaaatcgcaactttttaa 46719971  T
Q  306 aagtt-aggggggaaaagtgcactttag 332  Q
    ||||| ||||||||||| ||||||||||    
T  46719970 aagttaaggggggaaaaatgcactttag 46719943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 173 - 302
Target Start/End: Complemental strand, 55191672 - 55191544
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatctt-agggggtcaaaattgtagttt 271  Q
    ||||||||||| | || ||||||| ||||| | |||||| ||| ||||| ||||||| |||||||||||||||||||| || |||  |||||| ||||||    
T  55191672 acacacgtggcgtaccgcataggctttgactgatcaaaagtgataaaaaggatcaaaattgcaaaggggctaaatcttgagaggg--aaaattatagttt 55191575  T
Q  272 ttgtacttagggggtcaaaattgcaagtttt 302  Q
    ||||| |||||| ||||||||||||||||||    
T  55191574 ttgtatttagggtgtcaaaattgcaagtttt 55191544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 173 - 331
Target Start/End: Original strand, 34940126 - 34940284
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||| ||||||||| || |||||||||| | ||||||||||| |||||||| ||||  | |||| ||||||| | |||| ||  |||||||||| ||||    
T  34940126 acacatgtggcatgctacgtaggcattgatcagtcaaaattgagaaaaaagaccaaatatacaaatgggctaattattagaggaccaaaattgtaatttt 34940225  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 331  Q
    | ||| || | | | |||||||||||||||||||| |||| ||| ||||||||||||||    
T  34940226 tatacataagagattaaaattgcaagtttttaaaaattagagggaaaaagtgcacttta 34940284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 173 - 331
Target Start/End: Complemental strand, 49398288 - 49398130
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||| |||| |||||| |||||||||||||||||| ||||  ||||| ||||||||||||||| | ||||||||||| | || |||||||||| ||||    
T  49398288 acacacatggcgtgccacgtaggcattgaccggtcaacattggtaaaaaggatcaaagttgcaaatgagctaaatcttaagaggccaaaattgtaatttt 49398189  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 331  Q
    ||| | |||     ||||||   || ||||||||| ||| |||||||||||||||||||    
T  49398188 tgttcatagaacaccaaaataataattttttaaaacttaagggggaaaagtgcacttta 49398130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 239 - 332
Target Start/End: Original strand, 535787 - 535881
Alignment:
Q  239 gggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttag 332  Q
    ||||||||||||||||||| |||||| |||||||  |||||| |||  ||||||||||||||||| ||||||||||| |||||||| ||||||||    
T  535787 gggctaaatcttagggggtgaaaattatagttttaatacttaagggaccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttag 535881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 205 - 332
Target Start/End: Complemental strand, 8876036 - 8875908
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    |||||||||||| |||| || ||||  ||||||  ||||||||||||||||| |||||||||||||||||||| || ||||  |||||||||  |||||     
T  8876036 gtcaaaattgactaaaaggaccaaatatgcaaattggctaaatcttagggggccaaaattgtagtttttgtacataaggggctaaaattgcagctttttc 8875937  T
Q  305 aaagtt-aggggggaaaagtgcactttag 332  Q
     || || ||||| ||||||||||||||||    
T  8875936 gaacttaaggggtgaaaagtgcactttag 8875908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 204 - 331
Target Start/End: Complemental strand, 51347399 - 51347271
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    |||||| |||||  |||| ||||||||||||||| ||| ||||||||||||||||||||||||  ||||||| | ||| ||  ||||||||||| |||||    
T  51347399 ggtcaacattgatcaaaatgatcaaagttgcaaacgggttaaatcttagggggtcaaaattgtcatttttgttcatagaggaccaaaattgcaacttttt 51347300  T
Q  304 aaaagtt-aggggggaaaagtgcacttta 331  Q
     ||| || || |||| |||||||||||||    
T  51347299 caaacttaagagggggaaagtgcacttta 51347271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 204 - 311
Target Start/End: Complemental strand, 6249739 - 6249633
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||  |||| ||||||| |||||| | | |||||||||| ||| | |||||||||||||||||||||| ||| | ||||||||||||||||    
T  6249739 ggtcaaaattgatcaaaaggatcaaatttgcaatgagactaaatcttaagggat-aaaattgtagtttttgtacttaagggattaaaattgcaagttttt 6249641  T
Q  304 aaaagtta 311  Q
     |||||||    
T  6249640 gaaagtta 6249633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 249 - 332
Target Start/End: Original strand, 53901403 - 53901485
Alignment:
Q  249 ttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    |||||||| ||| ||||||||||||||||||| || ||||||||||||| ||||| ||| ||| ||||||||||||||||||||    
T  53901403 ttagggggccaacattgtagtttttgtacttaaggagtcaaaattgcaacttttttaaactta-gggggaaaagtgcactttag 53901485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 204 - 329
Target Start/End: Complemental strand, 23769987 - 23769862
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||| |||| || ||||| |||||| | || |||||||||||| |||||||||||||||||| || ||| || | |||||||||| || ||    
T  23769987 ggtcaaaattgaccaaaaggaccaaagatgcaaatgagcgaaatcttagggg-tcaaaattgtagtttttgcacatagaggattaaaattgcaacttgtt 23769889  T
Q  304 aaaagtt-aggggggaaaagtgcactt 329  Q
     |||||| |||| ||||||||||||||    
T  23769888 gaaagttaagggtggaaaagtgcactt 23769862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 173 - 265
Target Start/End: Original strand, 47615515 - 47615608
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattg 265  Q
    ||||||||||| |||||| ||||||||||    |||||||||||| |||| || ||||| ||||||||||||||||||||||||| ||||||||    
T  47615515 acacacgtggcctgccacgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattg 47615608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 173 - 265
Target Start/End: Complemental strand, 22775908 - 22775816
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattg 265  Q
    ||||||||  |||||||| |||||||||||||||||||||||  ||||| || ||||  |||||||||||||| |||| ||||| ||||||||    
T  22775908 acacacgtaacatgccacgtaggcattgaccggtcaaaattgggaaaaaggaccaaatctgcaaaggggctaattcttggggggccaaaattg 22775816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 232 - 332
Target Start/End: Complemental strand, 28262295 - 28262195
Alignment:
Q  232 tgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 331  Q
    ||||| ||||||||| | ||||||| ||||||||| |||||  ||| | ||||| |||||| ||||  |||| |||||||||||||||||||||||||||    
T  28262295 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttaggggggaaaagtgcacttta 28262196  T
Q  332 g 332  Q
    |    
T  28262195 g 28262195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 174 - 331
Target Start/End: Original strand, 40426717 - 40426877
Alignment:
Q  174 cacacgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||| ||| ||||||||||| || |||||  |||||||||| || |||| || |||||   |||||| |||||||| ||||||| |||||||||| ||||    
T  40426717 cacatgtgacatgccacatatgcgttgacttggtcaaaattaaccaaaaggaccaaagacacaaaggagctaaatcatagggggccaaaattgtaatttt 40426816  T
Q  273 tgtacttagggggtcaaaatt-gcaagtttttaaaagtta-ggggggaaaagtgcacttta 331  Q
    ||||  || |||| | ||||| |||| ||||| ||||||| ||||||||||||||||||||    
T  40426817 tgtatataaggggccgaaatttgcaacttttttaaagttaaggggggaaaagtgcacttta 40426877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 260 - 332
Target Start/End: Complemental strand, 5001275 - 5001202
Alignment:
Q  260 aaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttag 332  Q
    ||||||| ||||| |||||||||||| |||||||||||| |||| |||| |||||| |||||||||||||||||    
T  5001275 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggaggaaaagtgcactttag 5001202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 232 - 332
Target Start/End: Original strand, 28263109 - 28263210
Alignment:
Q  232 tgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta-ggggggaaaagtgcacttt 330  Q
    ||||| ||||||||| | ||||||| ||||||||| |||||  ||| | ||||| |||||| ||||  |||||||||||| |||||||||||||||||||    
T  28263109 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttaaaagttagggggggaaaagtgcacttt 28263208  T
Q  331 ag 332  Q
    ||    
T  28263209 ag 28263210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 218 - 321
Target Start/End: Complemental strand, 6170387 - 6170286
Alignment:
Q  218 aaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagggggg 317  Q
    |||| ||||||| |||||| | | |||||||||| |||   ||||||||| |||||||||||| ||| |||||||||||||||||| ||||||| ||| |    
T  6170387 aaaatgatcaaatttgcaatgagactaaatcttaagggt--aaaattgtaatttttgtacttaagggatcaaaattgcaagtttttgaaagttatgggtg 6170290  T
Q  318 aaaa 321  Q
    ||||    
T  6170289 aaaa 6170286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 47615591 - 47615647
Alignment:
Q  277 cttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    ||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  47615591 cttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttag 47615647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 54540077 - 54540030
Alignment:
Q  8 gttttgagaggaagagatgatgaagaagaagaaataaaagattgaggg 55  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||    
T  54540077 gttttgagaggaagagatgaagaagaagaagaaataaaaaattgaggg 54540030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 275
Target Start/End: Complemental strand, 10457702 - 10457600
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||||||| ||||||| |||||||||||| ||||||||||  ||||| || ||||  | ||||  | |||| || ||||||| |||||||||||||||    
T  10457702 acacacgtggaatgccacgtaggcattgaccagtcaaaattgggaaaaaggaccaaatatacaaatagactaattcctagggggccaaaattgtagtttt 10457603  T
Q  273 tgt 275  Q
    |||    
T  10457602 tgt 10457600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 49401270 - 49401312
Alignment:
Q  11 ttgagaggaagagatgatgaagaagaagaaataaaagattgag 53  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  49401270 ttgagaggaagagatgaagaagaagaagaaataaaagattgag 49401312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 455 - 512
Target Start/End: Complemental strand, 29081655 - 29081598
Alignment:
Q  455 acttgtgacattgtggttggcctatgtcatcgatgtcattaaccacaatgtcacccaa 512  Q
    |||||||||||||||||||| | |||||| ||||||||  ||||||||||||||||||    
T  29081655 acttgtgacattgtggttggtcaatgtcaccgatgtcaccaaccacaatgtcacccaa 29081598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 231 - 331
Target Start/End: Original strand, 53616013 - 53616114
Alignment:
Q  231 ttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactt 329  Q
    ||||||||| ||||| |||| |||||   |||||||||||||||||| || ||  | |||||| ||||| |||||||||| |||| ||||||||||||||    
T  53616013 ttgcaaaggagctaattcttggggggctgaaattgtagtttttgtacataaggaattaaaattacaagtgtttaaaagttaagggaggaaaagtgcactt 53616112  T
Q  330 ta 331  Q
    ||    
T  53616113 ta 53616114  T

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Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 514
Target Start/End: Complemental strand, 20286957 - 20286901
Alignment:
Q  458 tgtgacattgtggttggcctatgtcatcgatgtcattaaccacaatgtcacccaagt 514  Q
    ||||||||||||||||||| |||||||| ||||||  ||||| ||||||||||||||    
T  20286957 tgtgacattgtggttggccaatgtcatcaatgtcaccaaccataatgtcacccaagt 20286901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 332
Target Start/End: Complemental strand, 18442734 - 18442632
Alignment:
Q  232 tgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagg--ggggaaaagtgcactt 329  Q
    ||||| ||||||||| | ||||||| |||||||||||||||  ||| | ||||| |||||| ||||  |||| |||||||||  |||| |||||||||||    
T  18442734 tgcaatggggctaaaacatagggggccaaaattgtagttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggggaaagtgcactt 18442635  T
Q  330 tag 332  Q
    |||    
T  18442634 tag 18442632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 332
Target Start/End: Complemental strand, 19487808 - 19487706
Alignment:
Q  232 tgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagg--ggggaaaagtgcactt 329  Q
    ||||| ||||||||| | ||||||| |||||||||||||||  ||| | ||||| |||||| ||||  |||| |||||||||  |||| |||||||||||    
T  19487808 tgcaatggggctaaaacatagggggccaaaattgtagttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggggaaagtgcactt 19487709  T
Q  330 tag 332  Q
    |||    
T  19487708 tag 19487706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 204 - 331
Target Start/End: Original strand, 46492987 - 46493113
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||| |||| |||||||||||||  ||||||||| |||| ||||| ||||||||  ||||| | | || || |||||| | |||| |||||    
T  46492987 ggtcaaaattgaccaaaaggatcaaagttgcaggggggctaaaactta-ggggttaaaattgtcatttttattcatatggagtcaaagtcgcaacttttt 46493085  T
Q  304 aaaagttaggggggaaaagtgcacttta 331  Q
     ||| || |||||  |||||||||||||    
T  46493086 caaacttcgggggtgaaagtgcacttta 46493113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 327
Target Start/End: Complemental strand, 22775829 - 22775783
Alignment:
Q  281 gggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcac 327  Q
    ||||| ||||||||||| ||||| |||||||||||||||||||||||    
T  22775829 gggggccaaaattgcaactttttgaaagttaggggggaaaagtgcac 22775783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 330
Target Start/End: Original strand, 51348249 - 51348366
Alignment:
Q  208 aaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaa 307  Q
    ||||||||| |||| ||||||||||| ||| | ||||||||||||||| |||||||| |  ||||||| |      || ||||||| ||| ||||| |||    
T  51348249 aaaattgactaaaatgatcaaagttgtaaatgagctaaatcttaggggatcaaaattatcatttttgttc-----aggccaaaattacaacttttttaaa 51348343  T
Q  308 gttaggggggaaaagtgcacttt 330  Q
     ||| ||||||||||||||||||    
T  51348344 tttaagggggaaaagtgcacttt 51348366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 264
Target Start/End: Complemental strand, 53897231 - 53897173
Alignment:
Q  206 tcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaatt 264  Q
    ||||||||||| |||| ||||||||||||||| |||||||  ||||||||| |||||||    
T  53897231 tcaaaattgaccaaaaggatcaaagttgcaaatgggctaatacttagggggccaaaatt 53897173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 261
Target Start/End: Original strand, 10583983 - 10584067
Alignment:
Q  177 acgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaa 261  Q
    |||||||||||||| ||||  |||||  ||||||||||||| |||| | ||||  |||||||||||||||||||||||||| ||||    
T  10583983 acgtggcatgccacttaggtgttgacttggtcaaaattgaccaaaagg-tcaatattgcaaaggggctaaatcttagggggccaaa 10584067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 238 - 332
Target Start/End: Original strand, 18456067 - 18456163
Alignment:
Q  238 ggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta--ggggggaaaagtgcactttag 332  Q
    ||||||||| | ||||||| ||||||||| |||||  ||| | ||||| |||||| ||||  |||| |||||||  |||||||||||||||||||||    
T  18456067 ggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttaggggggggaaaagtgcactttag 18456163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 232 - 332
Target Start/End: Complemental strand, 52276407 - 52276306
Alignment:
Q  232 tgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagggggg-aaaagtgcacttt 330  Q
    ||||| ||||||||| | ||||||| ||||||||| |||||  ||| | ||||| |||||| ||||  |||| |||| |||||||| |||||||||||||    
T  52276407 tgcaatggggctaaaacatagggggccaaaattgttgttttcatacatggggggccaaaatcgcaacgttttgaaagatagggggggaaaagtgcacttt 52276308  T
Q  331 ag 332  Q
    ||    
T  52276307 ag 52276306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 232 - 332
Target Start/End: Original strand, 52281545 - 52281646
Alignment:
Q  232 tgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagggg-ggaaaagtgcacttt 330  Q
    ||||| ||||||||| | ||||||| ||||||||| |||||  ||| | ||||| |||||| ||||  |||| |||| |||||| |||||||||||||||    
T  52281545 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagatagggggggaaaagtgcacttt 52281644  T
Q  331 ag 332  Q
    ||    
T  52281645 ag 52281646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 173 - 317
Target Start/End: Original strand, 6171182 - 6171324
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||| ||||| |||||  ||||||||||   |||||||||| | |||| || ||||| |||||| |   |||||||||| ||||||||||| |||||||    
T  6171182 acacatgtggcgtgccaagtaggcattgattagtcaaaattggccaaaaggaccaaagatgcaaatgtt-taaatcttagagggtcaaaattatagtttt 6171280  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttagggggg 317  Q
    ||||| || |||| ||||||  ||| ||||||||| |||| ||||    
T  6171281 tgtacata-ggggccaaaatcacaattttttaaaacttagagggg 6171324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 49220491 - 49220534
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgac 216  Q
    |||||||||||| ||||| ||| |||||||||||||||||||||    
T  49220491 acacacgtggcaagccacgtagacattgaccggtcaaaattgac 49220534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 452 - 522
Target Start/End: Complemental strand, 22893959 - 22893890
Alignment:
Q  452 tacacttgtgacattgtggttggcctatgtcatcgatgtcattaaccacaatgtcacccaagtattttccc 522  Q
    ||||||||| |||||||||||||   |||||| | ||||||  ||||||||||||||||||||||| ||||    
T  22893959 tacacttgtaacattgtggttggta-atgtcaccaatgtcaccaaccacaatgtcacccaagtattatccc 22893890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 49401439 - 49401505
Alignment:
Q  185 tgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatctta 251  Q
    |||||| |||||||||| | ||||||||||||||||| ||| |||  |||||| ||||| |||||||    
T  49401439 tgccacgtaggcattgatcagtcaaaattgacaaaaaggataaaaaatgcaaatgggctgaatctta 49401505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 226 - 331
Target Start/End: Complemental strand, 52104586 - 52104484
Alignment:
Q  226 caaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgc 325  Q
    ||||| |||||| | | ||||||||||| || ||||||| |||||||||||| ||  ||  ||||||| ||| ||||| ||||||| |||||||||||||    
T  52104586 caaagatgcaaatgagttaaatcttaggtggccaaaattatagtttttgtacata--ggaccaaaattacaactttttgaaagtta-gggggaaaagtgc 52104490  T
Q  326 acttta 331  Q
    | ||||    
T  52104489 atttta 52104484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 332
Target Start/End: Complemental strand, 53614922 - 53614821
Alignment:
Q  231 ttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactt 329  Q
    ||||||| ||||||| |||| ||||| |||||||||||||||| ||  ||| ||   ||||||| |||||||| |||||| |||| |||||| |||||||    
T  53614922 ttgcaaatgggctaattctt-gggggccaaaattgtagtttttatatatagaggactaaaattgtaagtttttgaaagttaagggaggaaaaatgcactt 53614824  T
Q  330 tag 332  Q
    |||    
T  53614823 tag 53614821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 332
Target Start/End: Complemental strand, 26633416 - 26633363
Alignment:
Q  279 tagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    |||||||||||||| ||||  |||||||| ||||||| |||||||||| |||||    
T  26633416 tagggggtcaaaatcgcaacattttaaaacttaggggcgaaaagtgcagtttag 26633363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 277
Target Start/End: Original strand, 54654256 - 54654349
Alignment:
Q  184 atgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtac 277  Q
    ||||||| ||| ||||||||||||||| ||| | |||| ||| |||| |||||| || ||||||  ||| |||  ||||||||| |||||||||    
T  54654256 atgccacgtagacattgaccggtcaaagttggctaaaaggattaaagatgcaaatggtctaaattctagagggctaaaattgtaatttttgtac 54654349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 130; Significance: 5e-67; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 173 - 329
Target Start/End: Original strand, 36486427 - 36486584
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||  |||||||||||||||    
T  36486427 acacacgtggcatgccacgtaggcattgaccggtcaaaattgacaaaaaggatcaaagttgcaaagggactaaatcttaggggaccaaaattgtagtttt 36486526  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttagggggg-aaaagtgcactt 329  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36486527 tgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcactt 36486584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 173 - 331
Target Start/End: Original strand, 28539759 - 28539917
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||  |||||||||||||||    
T  28539759 acacacgtggcatgccacgtaggcattgaccggtcaaaattggcaaaaaggatcaaagttgcaaagggactaaatcttaggggaccaaaattgtagtttt 28539858  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 331  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28539859 tgtacttagagggtcaaaattgcaagtttttaaaagttaggggggaaaaatgcacttta 28539917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 28538838 - 28538678
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  28538838 acacacgtggcatgccacatagacattgaccggtcaaaattgacaaaaaggatcaaagttgcaaaggggctaaatcttagggggctaaaattgtagtttt 28538739  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttag 332  Q
    |||||||| |||||||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  28538738 tgtacttaaggggtcaaaattgcaagtttttgaaagttacgggtggaaaagtgcactttag 28538678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 178 - 332
Target Start/End: Complemental strand, 36485457 - 36485302
Alignment:
Q  178 cgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtac 277  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||    
T  36485457 cgtggcatgccatataggcattgaccggtcaaaattgacaaaaatgatcaaagttgcaaaggggttaaatcttagggggccaaaattatagtttttgtac 36485358  T
Q  278 ttagggggtcaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttag 332  Q
    ||| | ||||||||||| |||||||| ||||||||||| |||||| ||||||||||    
T  36485357 ttaagaggtcaaaattgtaagttttttaaagttaggggtggaaaaatgcactttag 36485302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 40255611 - 40255771
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||||||||| ||||| ||||||||||||||||||||||||  |||||||| ||| |||||| |||| |||||||||||||| ||||||||||||||     
T  40255611 acacacgtggcacgccacgtaggcattgaccggtcaaaattgatcaaaaagattaaaattgcaatggggttaaatcttagggggccaaaattgtagtttc 40255710  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    |||| |||||||||||||||||||||||||||||| || || |||||||||||||||||||    
T  40255711 tgtatttagggggtcaaaattgcaagtttttaaaaattaagaggggaaaagtgcactttag 40255771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 173 - 331
Target Start/End: Complemental strand, 24333075 - 24332916
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||||||||||||||| ||||||||||| ||||||||||||| |||| || ||||| |||||||||| |||||||||| |||||||||||||||||||    
T  24333075 acacacgtggcatgccacgtaggcattgactggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtagtttt 24332976  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcacttta 331  Q
    ||||| || |||| ||||||||||||||||| ||| || |||||| ||||||||||||||    
T  24332975 tgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcacttta 24332916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 19753074 - 19752914
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||| |||||| ||||| ||||    |||||||||||| |||| || ||||| ||||| ||||||||||| ||||||| ||||||||||||||    
T  19753074 acacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaatggggctaaatcatagggggccaaaattgtagttt 19752975  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  19752974 ttgtacttagggggccaaaattgcaagtttttgaaagttaggggggaaaagtgcactttag 19752914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 206 - 332
Target Start/End: Complemental strand, 25523198 - 25523071
Alignment:
Q  206 tcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaa 305  Q
    ||||||||||  |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |    
T  25523198 tcaaaattgatcaaaaggatcaaagatgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggctaaaattgcaagtttttga 25523099  T
Q  306 aagtt-aggggggaaaagtgcactttag 332  Q
    ||||| ||||||||||||||||||||||    
T  25523098 aagttaaggggggaaaagtgcactttag 25523071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 175 - 332
Target Start/End: Original strand, 22940563 - 22940721
Alignment:
Q  175 acacgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttttt 273  Q
    |||||||||||||||| ||||| |||||  ||||||||||||| |||| ||| |||| || ||||||||||||| ||||||| ||||||||||| |||||    
T  22940563 acacgtggcatgccacttaggcgttgacttggtcaaaattgaccaaaaggataaaagatgaaaaggggctaaattttagggg-tcaaaattgtaattttt 22940661  T
Q  274 gtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    |||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  22940662 gtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttag 22940721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 16650793 - 16650954
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccgg-tcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||||||||||| | || |||||  | ||||||||||| |||| || ||||| |||||| |||||||| |||||||||  |||||||||||||    
T  16650793 acacacgtggcatgccacacatgcgttgacttgatcaaaattgaccaaaaggaccaaagatgcaaatgggctaaaccttagggggctaaaattgtagttt 16650892  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    || |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  16650893 ttatacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttag 16650954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 33160226 - 33160385
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||| ||||| |||||| ||||||||||||||||||||||| | |||| ||| |||||||||| ||| |||||||||| |||||||||||||||||||     
T  33160226 acacatgtggcgtgccacgtaggcattgaccggtcaaaattggctaaaaggattaaagttgcaatggg-ctaaatcttaaggggtcaaaattgtagtttc 33160324  T
Q  273 tgtacttagggggtcaaaattgcaagttttt-aaaagttaggggggaaaagtgcactttag 332  Q
    | |||||||||||  |||||||||||||||| |||| | ||||||||||||||||||||||    
T  33160325 tatacttagggggctaaaattgcaagtttttgaaaattaaggggggaaaagtgcactttag 33160385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 18486840 - 18487001
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||| |||||| ||||| ||||    |||||||||||| |||| || ||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  18486840 acacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgtggttt 18486939  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
     | ||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||||||||    
T  18486940 ctatacttagggggccaaaattgcaagtttttgaaagttaagggggggaaagtgcactttag 18487001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 1797236 - 1797395
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||| ||||| ||||||||||||||||||||||||||||||| ||||   |||||||||||||||||||||||||||| |||  |||||||||||||||    
T  1797236 acacatgtggcgtgccacataggcattgaccggtcaaaattgaaaaaaggaatcaaagttgcaaaggggctaaatcttaagggaccaaaattgtagtttt 1797335  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    |||   || || | ||||||||||||||||||||| |||  ||| |||| | ||||||||    
T  1797336 tgtttataaggagccaaaattgcaagtttttaaaacttaaagggaaaaaatccactttag 1797395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 213 - 332
Target Start/End: Complemental strand, 21835162 - 21835043
Alignment:
Q  213 tgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttag 312  Q
    |||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||  ||| ||||| ||| ||||    
T  21835162 tgactaaaaggatcaaagttgcaaaggggttaaatcttagggggtcaaaattgtagtttttgtacatagggggtcaaaatcacaactttttcaaacttag 21835063  T
Q  313 gggggaaaagtgcactttag 332  Q
     |||| ||||||||||||||    
T  21835062 agggggaaagtgcactttag 21835043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 173 - 331
Target Start/End: Complemental strand, 42195295 - 42195137
Alignment:
Q  173 acacacgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||||||||| ||  || |||||  ||||||||||||| |||| || ||||| ||||||||||||||||||||||||  ||||||||||| ||    
T  42195295 acacacgtggcatgccaaatcagcgttgacttggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttaggggaccaaaattgtagatt 42195196  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 331  Q
    |||||| ||||||| |||||| |||| ||||| ||||||| |||||||||||||||||||    
T  42195195 ttgtacatagggggccaaaatcgcaacttttt-aaagttaagggggaaaagtgcacttta 42195137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 226 - 332
Target Start/End: Complemental strand, 5778008 - 5777903
Alignment:
Q  226 caaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgc 325  Q
    ||||||||||| ||||||||||||||||||| | ||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  5778008 caaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttagggggg-aaagtgc 5777910  T
Q  326 actttag 332  Q
    |||||||    
T  5777909 actttag 5777903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 25056318 - 25056480
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaagg-ggctaaatcttagggggtcaaaattgtagtt 270  Q
    ||||||||||||||||| ||| || ||||||  |||||||||| | ||||  | ||||| || ||| | |||||||||||||||||||||||||||||||    
T  25056318 acacacgtggcatgccaaataagcgttgaccaagtcaaaattggctaaaacaaccaaagatgtaaatgaggctaaatcttagggggtcaaaattgtagtt 25056417  T
Q  271 tttgtacttagggggtcaaaattgcaagtttttaaaagttagg-ggggaaaagtgcactttag 332  Q
    ||  ||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||    
T  25056418 ttaatacttagggggtcaaaattgcaagtttttgaaagttaggagtggaaaagtgcactttag 25056480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 204 - 332
Target Start/End: Original strand, 5778806 - 5778935
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    |||||||||||   |||| || ||||||||||| ||||||||||||||||||| | ||||||| ||||| ||||||||||||  ||||||||||||||||    
T  5778806 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggcaaaaattgcaagttttt 5778905  T
Q  304 aaaagttag-gggggaaaagtgcactttag 332  Q
     |||||||| ||||||||||||||||||||    
T  5778906 gaaagttagagggggaaaagtgcactttag 5778935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 25055575 - 25055414
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccgg-tcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||||||||| ||  ||||||||  | ||||||||||  |||| || ||||| |||||| |||||||||||||||||| ||||||||||||||    
T  25055575 acacacgtggcatgccaaatcagcattgacttgctcaaaattgatcaaaaggaccaaagatgcaaatgggctaaatcttagggggccaaaattgtagttt 25055476  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttag 332  Q
    || ||| |||||| |||||||||||||   || |||||||| ||||||||||||||||||||    
T  25055475 ttatacataggggatcaaaattgcaagaagtttaaagttagagggggaaaagtgcactttag 25055414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 173 - 284
Target Start/End: Complemental strand, 16650155 - 16650043
Alignment:
Q  173 acacacgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||||||||||| | ||||||||  ||||||||||||| |||| || ||||| |||||||||| |||||||||| ||||||||||||||||||    
T  16650155 acacacgtggcatgccacacatgcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtagttt 16650056  T
Q  272 ttgtacttagggg 284  Q
    |||||||||||||    
T  16650055 ttgtacttagggg 16650043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 205 - 321
Target Start/End: Original strand, 19754101 - 19754217
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    ||||||||||   |||| || ||||| ||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||||||     
T  19754101 gtcaaaattgttcaaaaggaccaaagatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttagggggccaaaattgcaagtttttg 19754200  T
Q  305 aaagttaggggggaaaa 321  Q
    |||||||||||||||||    
T  19754201 aaagttaggggggaaaa 19754217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 173 - 326
Target Start/End: Complemental strand, 1015646 - 1015492
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||| |||||||| ||| ||||||||||  |||||||||||   |||| || ||||  ||||||||| |||| ||||||||||| |||||||||| |||    
T  1015646 acacatgtggcatgtcacgtaggcattgattggtcaaaattggggaaaaggaccaaatatgcaaagggactaattcttagggggttaaaattgtaggttt 1015547  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttagggg-ggaaaagtgca 326  Q
    |||||  |||||| |||||||| || ||||||||||||||||| |||||||||||    
T  1015546 tgtacacagggggccaaaattgtaactttttaaaagttaggggaggaaaagtgca 1015492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 20214358 - 20214198
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||| ||||| |||||| ||||||| ||||||||||||| ||| ||  |   ||||||| ||| ||| ||||  |||| ||||||||||||||    
T  20214358 acacacgtggcctgccatataggcgttgaccgagtcaaaattgacataaaggactactattgcaaatgggataattcttgaggggccaaaattgtagttt 20214259  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    |||||| ||| | |  |||||||||||||||| ||||||| ||||||||||||||||||||    
T  20214258 ttgtacatagagtgctaaaattgcaagtttttgaaagttaagggggaaaagtgcactttag 20214198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 33158188 - 33158112
Alignment:
Q  245 aatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaa 321  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||    
T  33158188 aatcttaaggggtcaaaattgtagtttttgtacttagggtgtcaaaattgcaagtttttgaaagttagggggaaaaa 33158112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 18485308 - 18485140
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaa-------tt 264  Q
    ||||||||||| |||||| ||||| ||||    ||||||||| || |||| |||||||| ||||||||||||||||||||||||| |||||       ||    
T  18485308 acacacgtggcctgccacgtaggcgttgaataagtcaaaattaaccaaaaggatcaaagatgcaaaggggctaaatcttagggggccaaaacccaaaatt 18485209  T
Q  265 gtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttag 332  Q
    || |||||  ||||||||||| ||||||||||||||||| |||||||| |||| |||||||||||||||    
T  18485208 gttgttttgatacttagggggccaaaattgcaagttttttaaagttagaggggaaaaagtgcactttag 18485140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 205 - 294
Target Start/End: Original strand, 25524069 - 25524158
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattg 294  Q
    |||||||||||| |||| ||  |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||    
T  25524069 gtcaaaattgaccaaaaggactaaagatgcaaaggggctaaatcttagggggtcaaaattatagtttttgtacttaggaggccaaaattg 25524158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 231 - 332
Target Start/End: Complemental strand, 1796158 - 1796056
Alignment:
Q  231 ttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactt 329  Q
    ||||||| ||| ||| |||| |||| |||||||||||||||||||||||||| || |||| |||||||||||| ||||||||||| |||||| |||||||    
T  1796158 ttgcaaatgggttaattcttgggggatcaaaattgtagtttttgtacttaggtggccaaagttgcaagtttttgaaagttaggggtggaaaaatgcactt 1796059  T
Q  330 tag 332  Q
    |||    
T  1796058 tag 1796056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 204 - 332
Target Start/End: Original strand, 42196170 - 42196299
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||| |||| || ||||| |||||| |||||||||||||||||   |||| |||||||||||||| ||| ||| |||| |  ||| |||||    
T  42196170 ggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttaggggactaaaaatgtagtttttgtacatagagggccaaattcacaacttttt 42196269  T
Q  304 aaaagtta-ggggggaaaagtgcactttag 332  Q
    |||||||| |||||| ||||||||||||||    
T  42196270 aaaagttaggggggggaaagtgcactttag 42196299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 173 - 331
Target Start/End: Original strand, 20216701 - 20216861
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||| | ||||| |||||| ||||||| ||||||||||||  ||| ||  |   ||||||| ||||||| |||| ||||| ||||||||||||||    
T  20216701 acacacgtgacctgccatataggcgttgaccgagtcaaaattgacgtaaaggactactattgcaaatgggctaattcttggggggccaaaattgtagttt 20216800  T
Q  272 ttgtacttagggggtcaaaattgcaagttttt-aaaagttaggggggaaaagtgcacttta 331  Q
    |||||  ||||| |  |||||||||||||||| |||| | |||||||||||||||||||||    
T  20216801 ttgtatatagggagctaaaattgcaagtttttgaaaattaaggggggaaaagtgcacttta 20216861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 204 - 331
Target Start/End: Complemental strand, 2186901 - 2186774
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||| |||| || ||||| || |||  |||||||||||||||| | ||||||||||||||||||| |||  |  ||||||||||| |||||    
T  2186901 ggtcaaaattgaccaaaaggaccaaagatgtaaaatggctaaatcttaggggattaaaattgtagtttttgtacatagaagaccaaaattgcaacttttt 2186802  T
Q  304 aaaagttaggggggaaaagtgcacttta 331  Q
     ||| |||||||| |||| |||||||||    
T  2186801 gaaacttagggggaaaaaatgcacttta 2186774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 205 - 312
Target Start/End: Original strand, 2686372 - 2686479
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    |||||||||||  |||| || ||||| ||||| | ||||||||| ||||||  ||||||| ||||||||||||||| | | |||||||||||||||||||    
T  2686372 gtcaaaattgatcaaaaggaccaaagatgcaatgaggctaaatcataggggaccaaaattatagtttttgtacttaagagatcaaaattgcaagttttta 2686471  T
Q  305 aaagttag 312  Q
    ||||||||    
T  2686472 aaagttag 2686479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 248 - 332
Target Start/End: Original strand, 25524141 - 25524227
Alignment:
Q  248 cttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta--ggggggaaaagtgcactttag 332  Q
    |||||| || |||||||||||||||||||||||||||| ||||||| ||| ||||||||| |||  |||||||||||||||||||||    
T  25524141 cttaggaggccaaaattgtagtttttgtacttagggggccaaaattacaaatttttaaaaattaggggggggaaaagtgcactttag 25524227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 204 - 317
Target Start/End: Original strand, 5730832 - 5730945
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||  ||||  | ||||||||||| |||| |||||||||||||| | ||||||| ||||| |||||||||||| |||||||| ||||||||    
T  5730832 ggtcaaaattgatcaaaagaaccaaagttgcaatggggttaaatcttagggggactaaattgtggttttggtacttagggggccaaaattggaagttttt 5730931  T
Q  304 aaaagttagggggg 317  Q
     || ||| ||||||    
T  5730932 gaaggttggggggg 5730945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 240 - 317
Target Start/End: Complemental strand, 7311685 - 7311608
Alignment:
Q  240 ggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagggggg 317  Q
    |||||||||||||||||  ||||||||||||||||||||| || || ||| ||||||||||||| |||||||||||||    
T  7311685 ggctaaatcttagggggctaaaattgtagtttttgtacttgggaggccaatattgcaagtttttgaaagttagggggg 7311608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 208 - 321
Target Start/End: Complemental strand, 18154619 - 18154508
Alignment:
Q  208 aaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaa 307  Q
    ||||||||  |||| ||||||| |||||| || ||||||| |||| ||| ||||||||||||||||||||||| ||||||||||||| |||||||| |||    
T  18154619 aaaattgagcaaaatgatcaaatttgcaatggagctaaattttagaggg-caaaattgtagtttttgtactta-ggggtcaaaattgtaagtttttgaaa 18154522  T
Q  308 gttaggggggaaaa 321  Q
    |||| |||| ||||    
T  18154521 gttaaggggaaaaa 18154508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 28538977 - 28538930
Alignment:
Q  8 gttttgagaggaagagatgatgaagaagaagaaataaaagattgaggg 55  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28538977 gttttgagaggaagagatgatgaagaagaagaaataaaagattgaggg 28538930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 36485622 - 36485575
Alignment:
Q  8 gttttgagaggaagagatgatgaagaagaagaaataaaagattgaggg 55  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36485622 gttttgagaggaagagatgatgaagaagaagaaataaaagattgaggg 36485575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 173 - 321
Target Start/End: Original strand, 1016803 - 1016950
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||||||| ||||| || ||||||||||||| |||||||||   |||| || |||   |||||||| ||||| ||||||| | ||||||||||||||||    
T  1016803 acacacgtgacatgctacgtaggcattgaccgatcaaaattggggaaaatgaccaactatgcaaaggagctaattcttaggag-tcaaaattgtagtttt 1016901  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaa 321  Q
    ||||| |||  |  ||||||| ||| ||||||||| |||||||| ||||    
T  1016902 tgtacatagaagaccaaaattacaattttttaaaaattagggggaaaaa 1016950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 260 - 332
Target Start/End: Complemental strand, 5730517 - 5730443
Alignment:
Q  260 aaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta--ggggggaaaagtgcactttag 332  Q
    ||||||| ||||| |||||||||  | ||||||||||||||||| |||||||  |||||||||||||||||||||    
T  5730517 aaattgtggttttggtacttaggaagccaaaattgcaagtttttgaaagttaagggggggaaaagtgcactttag 5730443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 458 - 512
Target Start/End: Complemental strand, 1840024 - 1839970
Alignment:
Q  458 tgtgacattgtggttggcctatgtcatcgatgtcattaaccacaatgtcacccaa 512  Q
    ||||||||||||||||||| |||||||| ||||||  ||||||||||||||||||    
T  1840024 tgtgacattgtggttggccaatgtcatcaatgtcaccaaccacaatgtcacccaa 1839970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 231 - 321
Target Start/End: Complemental strand, 38834190 - 38834101
Alignment:
Q  231 ttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaa 321  Q
    |||||||||  ||||||||||||| |  ||||||||||||||||||| ||  |||||||||| |||| ||||||||||||| |||| ||||    
T  38834190 ttgcaaaggaactaaatcttagggagctaaaattgtagtttttgtacata-agggtcaaaatcgcaactttttaaaagttaaggggaaaaa 38834101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 261 - 314
Target Start/End: Complemental strand, 34893739 - 34893686
Alignment:
Q  261 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggg 314  Q
    ||||||||||||||||| ||||| | ||||||||||||||||| ||||||||||    
T  34893739 aattgtagtttttgtacatagggagccaaaattgcaagtttttgaaagttaggg 34893686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 514
Target Start/End: Original strand, 29385390 - 29385446
Alignment:
Q  458 tgtgacattgtggttggcctatgtcatcgatgtcattaaccacaatgtcacccaagt 514  Q
    ||||||||||||||||||| |||||| | ||||||  ||||||||||||||||||||    
T  29385390 tgtgacattgtggttggccaatgtcaccaatgtcaccaaccacaatgtcacccaagt 29385446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 177 - 332
Target Start/End: Original strand, 5962515 - 5962669
Alignment:
Q  177 acgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgta 276  Q
    |||||||||| ||||||| | ||||| ||| |||||||   |||| || ||||| || |||   ||||||| ||||| ||  |||||| |||||||||||    
T  5962515 acgtggcatgtcacatagacgttgacgggttaaaattggtcaaaaggaccaaagatgtaaattagctaaatattaggtggctaaaattatagtttttgta 5962614  T
Q  277 cttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    ||||||||  ||||||| ||| ||||| ||||| | | || |||||||||||||||    
T  5962615 cttaggggaccaaaattacaaatttttgaaagtca-gtggaaaaagtgcactttag 5962669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 36221144 - 36221062
Alignment:
Q  185 tgccacataggcattgac-cggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgt 266  Q
    ||||||||| || ||||| |||||||||||||  |||| ||| ||| |||||| | ||||||||||||||||| |||||||||    
T  36221144 tgccacataagcgttgactcggtcaaaattgatcaaaatgatgaaatttgcaatgaggctaaatcttagggggacaaaattgt 36221062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 259 - 316
Target Start/End: Complemental strand, 2685820 - 2685763
Alignment:
Q  259 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggg 316  Q
    ||||||||||||||||||||||||||  |||||||  |||||||| ||| ||||||||    
T  2685820 aaaattgtagtttttgtacttaggggaccaaaattataagtttttgaaaattaggggg 2685763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 259 - 332
Target Start/End: Original strand, 21834944 - 21835017
Alignment:
Q  259 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    ||||||||||||||||| | |||  ||||||| |||||| ||||| ||| |||  |||||||||||||||||||    
T  21834944 aaaattgtagtttttgttcatagaaggtcaaatttgcaactttttcaaacttataggggaaaagtgcactttag 21835017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 173 - 265
Target Start/End: Complemental strand, 5961568 - 5961476
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattg 265  Q
    |||||||||||||| ||  ||| ||||||||||| |||| ||   |||| |||||||| |||||||||| ||||| ||||||||  |||||||    
T  5961568 acacacgtggcatgtcatgtagacattgaccggttaaaaatggtcaaaaggatcaaagatgcaaaggggttaaattttagggggctaaaattg 5961476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 514
Target Start/End: Original strand, 7137734 - 7137805
Alignment:
Q  443 attttttgttacacttgtgacattgtggttggcctatgtcatcgatgtcattaaccacaatgtcacccaagt 514  Q
    |||||||  |||||||||||||||||||||| || ||||| || ||||||  ||| | ||||||||||||||    
T  7137734 atttttttatacacttgtgacattgtggttgaccaatgtcgtcaatgtcaccaactataatgtcacccaagt 7137805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 331
Target Start/End: Original strand, 24025313 - 24025360
Alignment:
Q  284 ggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 331  Q
    ||||||||||||||  |||||||| ||||||| |||||||||||||||    
T  24025313 ggtcaaaattgcaaaattttaaaacttaggggcgaaaagtgcacttta 24025360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 3597453 - 3597394
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaatt 264  Q
    ||||||||||||| |||| |||||   |||||||||||||||||| |||||| ||||||||    
T  3597453 ggtcaaaattgactaaaa-gatcaccattgcaaaggggctaaatcataggggatcaaaatt 3597394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 458 - 514
Target Start/End: Complemental strand, 19417498 - 19417442
Alignment:
Q  458 tgtgacattgtggttggcctatgtcatcgatgtcattaaccacaatgtcacccaagt 514  Q
    ||||||||||| |||| || |||||| | ||||||  ||||||||||||||||||||    
T  19417498 tgtgacattgtagttgaccaatgtcaccaatgtcaccaaccacaatgtcacccaagt 19417442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 1e-58; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 39699706 - 39699865
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||| |||| |||||| ||||||||||||||||||||||||| |||| ||| |||||||||| ||||||||||||||||||| ||||||||||||||     
T  39699706 acacacatggcgtgccacgtaggcattgaccggtcaaaattgaccaaaaggattaaagttgcaatggggctaaatcttagggggccaaaattgtagtttc 39699805  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  39699806 tgtacttagggggtcaaaattgcaagttattgaaagttaggggggaaaagtgcactttag 39699865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 14999443 - 14999287
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| | | |||||||   || || ||||||||||||||||    
T  14999443 acacacatggcatgccacgtaggcattgaccggtcaaaattgacaaaaaggatcaaagttgcagatgagctaaat---agaggatcaaaattgtagtttt 14999347  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  14999346 tgtacttagggggtcaaaattgcaagtttttgaaagttaggggggaaaagtacactttag 14999287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 173 - 331
Target Start/End: Original strand, 45149909 - 45150068
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggt-caaaattgtagttt 271  Q
    ||||||||||||| |||| ||||| ||||||||||||||||| | |||| |||||||| |||||||||||||||||||||||||  ||||||||| ||||    
T  45149909 acacacgtggcattccacgtaggctttgaccggtcaaaattggccaaaaggatcaaagatgcaaaggggctaaatcttagggggggcaaaattgttgttt 45150008  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 331  Q
    ||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  45150009 ttgtacttaaggggccaaaattgcaagtttttgaaagttaggggggaaaagtgcacttta 45150068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 24422963 - 24422802
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||||||||||| |||| |||||   |||||||||||| |||| ||||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  24422963 acacacgtggcatgccacacaggcgttgactatgtcaaaattgaccaaaaggatcaaatttgcaatggggctaaatcttagggggccaaaattgtagttt 24422864  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    |||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||    
T  24422863 ttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggtaaaagtgcactttag 24422802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 173 - 331
Target Start/End: Original strand, 39153055 - 39153214
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||||||||||||||| ||||||||||| ||||||||||||| |||| || ||||| |||||||||| |||||||||| |||||||||||||||||||    
T  39153055 acacacgtggcatgccacgtaggcattgactggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtagtttt 39153154  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcacttta 331  Q
    ||||| || |||| ||||||||||||||||| ||| || |||||| ||||||||||||||    
T  39153155 tgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcacttta 39153214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 180 - 321
Target Start/End: Original strand, 14999901 - 15000042
Alignment:
Q  180 tggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtactt 279  Q
    ||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||| || |||||| ||||| |||||  ||||||| ||||||||||    
T  14999901 tggcatgccacgtaggcattgacaggtcaaaattgacaaaaaggatcaaagttgcaaatggactaaattttaggtggtcatgattgtagattttgtactt 15000000  T
Q  280 agggggtcaaaattgcaagtttttaaaagttaggggggaaaa 321  Q
    ||||| ||||||||||||||||||||||||||||| ||||||    
T  15000001 aggggatcaaaattgcaagtttttaaaagttagggaggaaaa 15000042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 52275131 - 52274970
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    |||||| |||||||||||  |||| |||||   |||||||||||| |||| ||||||| |||||| | ||||||||||||||||  ||||||||||||||    
T  52275131 acacacttggcatgccacgcaggcgttgactatgtcaaaattgaccaaaaggatcaaatttgcaatgaggctaaatcttaggggcccaaaattgtagttt 52275032  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttagggggg-aaaagtgcactttag 332  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  52275031 ttgtacttagggggtcaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttag 52274970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 45148742 - 45148583
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||| |||||||||||| ||||| ||||||||||||||||| | |||| || ||||| |||||||||| |||||||||||||| |||||||||||||||    
T  45148742 acacatgtggcatgccacgtaggctttgaccggtcaaaattggccaaaaggaccaaagatgcaaaggggttaaatcttaggggggcaaaattgtagtttt 45148643  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    | ||||||||||| ||||||||||||||||| |||||| || ||| |||||||||||||||    
T  45148642 t-tacttagggggccaaaattgcaagtttttgaaagttaagcgggaaaaagtgcactttag 45148583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 192 - 332
Target Start/End: Original strand, 45157167 - 45157307
Alignment:
Q  192 taggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaa 291  Q
    ||||||||||| ||||||||||||| |||| || ||||| |||||||||| |||||||||  |||||||||||||||||||||||| ||||||| |||||    
T  45157167 taggcattgactggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagggtcaaaattgtagtttttgtacatagggggccaaaa 45157266  T
Q  292 ttgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    |||||||||||| ||| ||||||||| ||||||||||||||    
T  45157267 ttgcaagtttttgaaacttagggggggaaagtgcactttag 45157307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 205 - 331
Target Start/End: Complemental strand, 43058915 - 43058789
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||     
T  43058915 gtcaaaattgaccaaaaggatcaaagatgtaaaggggctaaatcttagagggctaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttc 43058816  T
Q  305 aaagttaggggggaaaagtgcacttta 331  Q
    |||||||||||| ||||||| ||||||    
T  43058815 aaagttagggggaaaaagtgtacttta 43058789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 36613842 - 36614003
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||| |||||| ||||| ||||    |||||||||||  |||| ||  |||||||||||| ||||||||||||||||||||||||||||||||    
T  36613842 acacacgtggcctgccacgtaggcgttgaataagtcaaaattgatcaaaaggactaaagttgcaaagaggctaaatcttagggggtcaaaattgtagttt 36613941  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttag 332  Q
    |||||||||||||| ||||||| ||||||||||||||||||||| |||||| ||||||||||    
T  36613942 ttgtacttagggggccaaaattacaagtttttaaaagttaggggaggaaaaatgcactttag 36614003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 175 - 332
Target Start/End: Original strand, 11437139 - 11437298
Alignment:
Q  175 acacgtggcatgccacataggcattgac-cggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttttt 273  Q
    |||||||||||||||| || || ||||| |||||||||||||| |||| |||||||| || ||| ||| |||||||||||||| ||||||||||||||||    
T  11437139 acacgtggcatgccacttaagcgttgactcggtcaaaattgaccaaaaggatcaaagatgtaaaagggttaaatcttagggggccaaaattgtagttttt 11437238  T
Q  274 gtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    ||||||| |||  ||||||||||||||||| |||||| |||||| |||||||||||||||    
T  11437239 gtacttaagggaccaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttag 11437298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 173 - 331
Target Start/End: Original strand, 43378651 - 43378810
Alignment:
Q  173 acacacgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||||||||||||| || |||||  ||||||||| ||| |||| ||| |||| |||||||| ||||||||||||| ||||||||||||| |||    
T  43378651 acacacgtggcatgccacatatgcgttgacttggtcaaaatcgaccaaaaggattaaagatgcaaaggtgctaaatcttaggtggtcaaaattgtaattt 43378750  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 331  Q
    ||||||||||||| ||||||||| |||||||| ||||||| | | |||||||||||||||    
T  43378751 ttgtacttaggggatcaaaattgtaagtttttgaaagttaagagagaaaagtgcacttta 43378810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 204 - 332
Target Start/End: Complemental strand, 51684497 - 51684368
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||| | |||| || ||||| ||||||||||||||||||||||||| |||||||||||||||| ||| ||||||| ||||||||||| |||||    
T  51684497 ggtcaaaattggccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagtttttatacatagggggccaaaattgcaacttttt 51684398  T
Q  304 aaaagtt-aggggggaaaagtgcactttag 332  Q
    ||||||| ||||||||||||||||||||||    
T  51684397 aaaagttaaggggggaaaagtgcactttag 51684368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 173 - 321
Target Start/End: Complemental strand, 39152093 - 39151945
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||| |||||||||||| ||||||||||| ||||||||||||| |||| || ||||| |||||||||| |||||||||  | |||||||||||||||||    
T  39152093 acacatgtggcatgccacgtaggcattgactggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagagtcaaaattgtagtttt 39151994  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaa 321  Q
    ||||| ||||||| ||||||| ||||||||| ||| ||| |||||||||    
T  39151993 tgtacatagggggccaaaattacaagtttttgaaacttaagggggaaaa 39151945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 173 - 321
Target Start/End: Complemental strand, 44404604 - 44404456
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| |||| || ||||| ||||||  |||||||| |||||||| ||||||| |||||||    
T  44404604 acacacgtggcgtgccacgtaggcattgaccggtcaaaattgaccaaaatgaccaaagatgcaaattggctaaattttagggggccaaaattatagtttt 44404505  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaa 321  Q
    |||||||||||||  |||||||| ||||||| ||||||| | |||||||    
T  44404504 tgtacttagggggctaaaattgctagtttttgaaagttatgagggaaaa 44404456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 173 - 300
Target Start/End: Original strand, 44411905 - 44412032
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||||||||| |||||| ||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||  |||  ||||||||||||||    
T  44411905 acacacgtggcgtgccacgtaggcattgaccggtcaaaattggcaaaaaggatcaaagttgcaaagggcctaaatcttaaaggggtaaaattgtagtttt 44412004  T
Q  273 tgtacttagggggtcaaaattgcaagtt 300  Q
    ||||||||||||   |||||||||||||    
T  44412005 tgtacttaggggactaaaattgcaagtt 44412032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 35594378 - 35594219
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||||||||| ||| || ||||||  |||||||||| | |||| || ||||| |||||||||||||||| ||||||| |||||||||||||||    
T  35594378 acacacgtggcatgccaaataagcgttgaccaagtcaaaattggctaaaaggaccaaagatgcaaaggggctaaattttagggg-tcaaaattgtagttt 35594280  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttag 332  Q
    |  |||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  35594279 taatacttagggg-tcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttag 35594219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 52827510 - 52827349
Alignment:
Q  173 acacacgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||| ||||||||||| || ||| |||||  |||||||||||   |||| || ||||||||||| |||||||||||||||||||   ||||||| ||||    
T  52827510 acacatgtggcatgccaaatcggcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttt 52827411  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttagg-ggggaaaagtgcactttag 332  Q
    | |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  52827410 tggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttag 52827349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 204 - 331
Target Start/End: Original strand, 24426045 - 24426173
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||| ||||  |||||| |||||| ||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||||||    
T  24426045 ggtcaaaattgaccaaaagtatcaaatttgcaatggggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaattgcaagttttt 24426144  T
Q  304 aaaagttag-gggggaaaagtgcacttta 331  Q
     |||||||| ||||| |||||||||||||    
T  24426145 gaaagttagaggggggaaagtgcacttta 24426173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 204 - 332
Target Start/End: Complemental strand, 41364959 - 41364831
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||  |||| || ||||||||||| ||||||||||||||||||| | ||||||| ||||| ||| |||||||| |||||||||||||||||    
T  41364959 ggtcaaaattgatcaaaatgaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtatttagggggccaaaattgcaagttttt 41364860  T
Q  304 aaaagttaggggggaaaagtgcactttag 332  Q
     ||||||||||| ||||||||||||||||    
T  41364859 gaaagttaggggagaaaagtgcactttag 41364831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 11436205 - 11436044
Alignment:
Q  173 acacacgtggcatgccacataggcattgac-cggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||| |||||||||||| ||||| ||||| |||||||||||||| ||||  | ||||| |||||| ||| |||||||||||||| ||||||||||||||    
T  11436205 acacatgtggcatgccacttaggcgttgactcggtcaaaattgaccaaaagaaccaaagatgcaaatgggttaaatcttagggggccaaaattgtagttt 11436106  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    || ||||||   || ||||||||||||||||| |||||| | ||||||||||||||||||||    
T  11436105 ttatacttaaaaggccaaaattgcaagtttttgaaagttaaagggggaaaagtgcactttag 11436044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 192 - 332
Target Start/End: Complemental strand, 39698705 - 39698565
Alignment:
Q  192 taggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaa 291  Q
    |||| |||||||||||||||||||| |||| ||| |||||||||| | ||||||||||||| ||  ||||||| |||||| ||||||||||||| |||||    
T  39698705 taggtattgaccggtcaaaattgaccaaaaggattaaagttgcaacgaggctaaatcttagtggc-caaaattatagtttctgtacttagggggccaaaa 39698607  T
Q  292 ttgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    ||| ||||||||||||||| ||||||| ||||||||||||||    
T  39698606 ttgaaagtttttaaaagttaaggggggtaaagtgcactttag 39698565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 208 - 332
Target Start/End: Original strand, 51685739 - 51685864
Alignment:
Q  208 aaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaa 307  Q
    ||||||| | |||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| |||| ||||| |||    
T  51685739 aaaattggccaaaaggaccaaagatgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacatagagggccaaaatcgcaactttttgaaa 51685838  T
Q  308 gttag-gggggaaaagtgcactttag 332  Q
    ||||| ||||||||||||||||||||    
T  51685839 gttagagggggaaaagtgcactttag 51685864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 226 - 332
Target Start/End: Original strand, 33088609 - 33088716
Alignment:
Q  226 caaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttag-gggggaaaagtg 324  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||  ||||||||||||||||||||| || ||||| | ||||||||||    
T  33088609 caaagttgcaaaggggctaaatcttagggaggcaaaattgtagtttttgtacttaaagggtcaaaattgcaagtttttgaatgttagagagggaaaagtg 33088708  T
Q  325 cactttag 332  Q
    ||||||||    
T  33088709 cactttag 33088716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 35595130 - 35595292
Alignment:
Q  173 acacacgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattg-tagtt 270  Q
    ||||||||||||||||| ||  ||||||||  ||||||||||||| |||| || ||||| |||||||||||||||||||| |||| |||||||| |||||    
T  35595130 acacacgtggcatgccaaatcagcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatctta-ggggccaaaattgttagtt 35595228  T
Q  271 tttgtacttagggggtcaaaattgc-aagtttttaaaagttag-gggggaaaagtgcactttag 332  Q
    ||| ||| ||||||||||||||||| |||||||| |||||||| ||||||||||| ||||||||    
T  35595229 tttatacatagggggtcaaaattgctaagttttttaaagttagagggggaaaagtacactttag 35595292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 205 - 331
Target Start/End: Complemental strand, 50680461 - 50680335
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    |||||||||||| |||| |||||||| |||||||||| |||||||||||||   |||||| |||||||| ||||||||||| |||||||||||||||||     
T  50680461 gtcaaaattgaccaaaaggatcaaagatgcaaaggggttaaatcttaggggactaaaattatagtttttatacttagggggccaaaattgcaagtttttg 50680362  T
Q  305 aaagttaggggggaaaagtgcacttta 331  Q
     |||||| ||||||||| |||||||||    
T  50680361 gaagttaagggggaaaaatgcacttta 50680335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 205 - 332
Target Start/End: Original strand, 43059977 - 43060105
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    |||||||||||| |||| || ||||| |||||| | ||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||| |||||     
T  43059977 gtcaaaattgaccaaaaggaccaaagatgcaaatgagctaaatcttaaggggtcaaaattgtagtttttgtacttaaggggtcaaaatttcaaatttttg 43060076  T
Q  305 aaagttag-gggggaaaagtgcactttag 332  Q
    |||||||| ||||| ||||| ||||||||    
T  43060077 aaagttagagggggtaaagtacactttag 43060105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 232 - 332
Target Start/End: Original strand, 23980464 - 23980565
Alignment:
Q  232 tgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttag-gggggaaaagtgcacttt 330  Q
    |||||||||||||||||||||| |  ||||||| |||||||||||||||||| | ||||||||||||||||| |||||||| ||||||||||||||||||    
T  23980464 tgcaaaggggctaaatcttaggagaccaaaattatagtttttgtacttagggagccaaaattgcaagttttttaaagttagagggggaaaagtgcacttt 23980563  T
Q  331 ag 332  Q
    ||    
T  23980564 ag 23980565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 204 - 331
Target Start/End: Original strand, 52828040 - 52828168
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    |||||||||||   |||| || ||||||||||| ||||||||||||||||||| | ||||||| ||||| |||||||||| | |||||||||||||||||    
T  52828040 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggagccaaaattgcaagttttt 52828139  T
Q  304 aaaagttag-gggggaaaagtgcacttta 331  Q
     ||| |||| |||||||||||||||||||    
T  52828140 gaaaattagagggggaaaagtgcacttta 52828168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 204 - 331
Target Start/End: Complemental strand, 7983180 - 7983053
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||| |||| ||| ||| |||||| |||| |||||||||||||| ||||||||| |||||  ||| ||||||| |||||||||||||| ||    
T  7983180 ggtcaaaattgaccaaaaggatgaaatttgcaatggggataaatcttaggggggcaaaattgtggttttgatacatagggggccaaaattgcaagttgtt 7983081  T
Q  304 aaaagttaggggggaaaagtgcacttta 331  Q
     ||||||| ||| |||||||||||||||    
T  7983080 gaaagttacgggagaaaagtgcacttta 7983053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 205 - 332
Target Start/End: Original strand, 39222444 - 39222573
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    |||||||||| | ||||||| ||||| |||||| |||| ||||||||| |||  || |||||||||||| ||||||||||| |||||||||||||||||     
T  39222444 gtcaaaattgcccaaaaagaccaaagatgcaaatgggcaaaatcttagagggctaacattgtagtttttatacttagggggccaaaattgcaagtttttg 39222543  T
Q  305 aaagtt--aggggggaaaagtgcactttag 332  Q
    ||||||  |||||| |||||||||||||||    
T  39222544 aaagttaaagggggtaaaagtgcactttag 39222573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 196 - 331
Target Start/End: Complemental strand, 45156188 - 45156052
Alignment:
Q  196 cattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgc 295  Q
    ||||||| ||||||||||||| ||||||| ||||| | ||||| || |||||||||| |||| ||||||||||||||||||| |||  |||||||||||     
T  45156188 cattgactggtcaaaattgaccaaaaagaccaaagatacaaagaggttaaatcttagagggttaaaattgtagtttttgtacatagaaggtcaaaattgt 45156089  T
Q  296 aagtttttaaaagtt-aggggggaaaagtgcacttta 331  Q
    |||||||| ||| || |||| ||||||||| ||||||    
T  45156088 aagtttttgaaacttaagggaggaaaagtgaacttta 45156052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 205 - 331
Target Start/End: Original strand, 37526849 - 37526975
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    |||||||||||  ||||||| ||||| |||||||||||||||||||| |||| ||||||||| |||| | || |||||| | |||||||||||||||||     
T  37526849 gtcaaaattgatcaaaaagaccaaagatgcaaaggggctaaatctta-ggggccaaaattgtggtttctatatttagggagccaaaattgcaagtttttg 37526947  T
Q  305 aaagtt-aggggggaaaagtgcacttta 331  Q
    |||||| ||||||||||||| |||||||    
T  37526948 aaagttaaggggggaaaagtacacttta 37526975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 226 - 332
Target Start/End: Original strand, 7675451 - 7675557
Alignment:
Q  226 caaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgc 325  Q
    ||||| ||||||||||||||||||||||||||||||||| || ||||| |||||||| || ||||||||||||||||| |||||||  || | ||||| |    
T  7675451 caaagatgcaaaggggctaaatcttagggggtcaaaattataatttttttacttaggagggcaaaattgcaagtttttgaaagttaaaggtggaaagtac 7675550  T
Q  326 actttag 332  Q
    |||||||    
T  7675551 actttag 7675557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 231 - 332
Target Start/End: Original strand, 35066999 - 35067101
Alignment:
Q  231 ttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactt 329  Q
    ||||||||||||||||| |||||||| |||||||||||||||||| | ||||||| |||||| |||| ||||| ||| || |||||||||||||||||||    
T  35066999 ttgcaaaggggctaaatattagggggccaaaattgtagtttttgttcatagggggccaaaatcgcaactttttgaaacttaaggggggaaaagtgcactt 35067098  T
Q  330 tag 332  Q
    |||    
T  35067099 tag 35067101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 208 - 332
Target Start/End: Complemental strand, 36612979 - 36612855
Alignment:
Q  208 aaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaa 307  Q
    ||||||||| |||| || ||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||  |   ||||||||||| ||||| |||    
T  36612979 aaaattgaccaaaatgaccaaagatgcaaagggactaaatcttagggggttaaaattgtagtttttgtactta-agatccaaaattgcaaatttttgaaa 36612881  T
Q  308 gtt-aggggggaaaagtgcactttag 332  Q
    ||| ||||||||||| ||||||||||    
T  36612880 gttaaggggggaaaaatgcactttag 36612855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 256 - 332
Target Start/End: Complemental strand, 7674605 - 7674530
Alignment:
Q  256 gtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||| |||||||||    
T  7674605 gtcaaaattgtagtttttgtacttagggcc-caaaattgcaagtttttaaaagttaggggggaaaagggcactttag 7674530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 204 - 331
Target Start/End: Original strand, 52276133 - 52276261
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||  |||| ||||||| |||||| ||||||||||||||||||   ||| || |||||||||||||||||||| ||||||| ||| |||||    
T  52276133 ggtcaaaattgatcaaaaggatcaaatttgcaatggggctaaatcttaggggactaaatttatagtttttgtacttagggggccaaaattacaaattttt 52276232  T
Q  304 aaaagttag-gggggaaaagtgcacttta 331  Q
     ||||||||  |||| |||||||||||||    
T  52276233 gaaagttagaagggggaaagtgcacttta 52276261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 186 - 303
Target Start/End: Complemental strand, 40384874 - 40384757
Alignment:
Q  186 gccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttaggggg 285  Q
    ||||||||| |||||| |||||||||||| | |||| || ||||| ||||||| |||||||| ||||||| ||||||||||||||||||||| |||| |     
T  40384874 gccacatagacattgatcggtcaaaattggccaaaaggaccaaagatgcaaagaggctaaattttaggggatcaaaattgtagtttttgtacataggaga 40384775  T
Q  286 tcaaaattgcaagttttt 303  Q
      |||||||||| |||||    
T  40384774 ctaaaattgcaacttttt 40384757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 205 - 332
Target Start/End: Complemental strand, 25652844 - 25652717
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    |||||||||| | |||| || ||||| |||||| |||||||||||||| ||| |||| || || |||||||||||| ||| ||||||||||||||||||     
T  25652844 gtcaaaattggccaaaatgaccaaagatgcaaatgggctaaatcttagcgggccaaatttataatttttgtacttaagggatcaaaattgcaagtttttg 25652745  T
Q  305 aaagttaggggggaaaagtgcactttag 332  Q
    ||| ||||  || ||| |||||||||||    
T  25652744 aaaattagaaggaaaaggtgcactttag 25652717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 205 - 331
Target Start/End: Original strand, 30249461 - 30249588
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    |||||||||||  ||||||||||||| | |||| | ||||||||||| ||||||||||||||||||||||||| ||   | |||||||| ||| |||||     
T  30249461 gtcaaaattgatcaaaaagatcaaagatacaaatgagctaaatcttaaggggtcaaaattgtagtttttgtacataaaagatcaaaattacaactttttg 30249560  T
Q  305 aaagtta-ggggggaaaagtgcacttta 331  Q
    ||||||| || ||||| |||||||||||    
T  30249561 aaagttacggagggaagagtgcacttta 30249588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 226 - 332
Target Start/End: Original strand, 41366123 - 41366229
Alignment:
Q  226 caaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagg-ggggaaaagtg 324  Q
    ||||||||||| ||||||||||||||||||| | ||||||| |||||  |||||| ||||  ||||||||| |||||| ||||||||| |||||||||||    
T  41366123 caaagttgcaatggggctaaatcttaggggg-ctaaattgtggttttgatacttaaggggctaaaattgcatgtttttgaaagttaggaggggaaaagtg 41366221  T
Q  325 cactttag 332  Q
    ||||||||    
T  41366222 cactttag 41366229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 204 - 329
Target Start/End: Complemental strand, 46066653 - 46066530
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||  |||||||||| || ||||||  |||||||||||||||| | ||||||||||||||||||| || ||||  ||||| |||| |||||    
T  46066653 ggtcaaaattgatcaaaaagatcagagatgcaaattggctaaatcttaggggct-aaaattgtagtttttgtacataaggggctaaaatcgcaacttttt 46066555  T
Q  304 aaaagttaggggggaaaagtgcactt 329  Q
     ||||||| || ||||||||||||||    
T  46066554 gaaagtta-ggaggaaaagtgcactt 46066530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 204 - 332
Target Start/End: Complemental strand, 2940396 - 2940268
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    |||||||||| || |||| ||||||| |||||||| || ||||||||||||| ||||||||||  ||||||| | ||| ||||||||||  |||  ||||    
T  2940396 ggtcaaaattaactaaaaggatcaaaattgcaaagaggttaaatcttaggggatcaaaattgttatttttgttcatagagggtcaaaatcacaacatttt 2940297  T
Q  304 aaaagttaggggggaaaagtgcactttag 332  Q
    |||| ||| ||||||||| | ||||||||    
T  2940296 aaaacttaagggggaaaaatacactttag 2940268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 231 - 332
Target Start/End: Original strand, 12389979 - 12390080
Alignment:
Q  231 ttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactt 329  Q
    |||||||||||||||||| ||||||| ||||||| || ||||||||| |||||| ||||||| |||| ||||| |||||| ||| ||||||| |||||||    
T  12389979 ttgcaaaggggctaaatc-tagggggccaaaattataatttttgtacataggggatcaaaatcgcaactttttgaaagttaaggagggaaaaatgcactt 12390077  T
Q  330 tag 332  Q
    |||    
T  12390078 tag 12390080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 197 - 332
Target Start/End: Complemental strand, 33739231 - 33739096
Alignment:
Q  197 attgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgca 296  Q
    |||||||  ||||||||||| |||| ||| |||||||||| |||| ||||| ||||||| | ||| || |||||| ||| | || |||||||||||| ||    
T  33739231 attgaccaatcaaaattgaccaaaatgattaaagttgcaatggggttaaattttaggggataaaatttttagtttctgtgcgtaaggggtcaaaattaca 33739132  T
Q  297 agtttttaaaagttaggggggaaaagtgcactttag 332  Q
    || |||| |||||||| ||| |||| |||| |||||    
T  33739131 agcttttgaaagttagagggaaaaaatgcattttag 33739096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 321
Target Start/End: Complemental strand, 43377883 - 43377734
Alignment:
Q  173 acacacgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||||||||||| | || |||||  ||||||||||||| |||| |||||||| || |||| | |||||| ||||| || ||||||| || |||    
T  43377883 acacacgtggcatgccacacatgcgttgacttggtcaaaattgaccaaaaggatcaaaggtgtaaagagactaaattttaggaggccaaaattataattt 43377784  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaa 321  Q
    || ||||||  ||   |||||||||||| ||||||| ||| | |||||||    
T  43377783 ttatacttaaaggactaaaattgcaagtgtttaaaaattaagcgggaaaa 43377734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 261
Target Start/End: Original strand, 46525739 - 46525827
Alignment:
Q  173 acacacgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaa 261  Q
    ||||||||||||||||| ||| || |||||  ||||||||||||| |||| ||||| | |||||||||||||||||||||||||| ||||    
T  46525739 acacacgtggcatgccaaataagcgttgacttggtcaaaattgaccaaaa-gatcacaattgcaaaggggctaaatcttagggggccaaa 46525827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 173 - 313
Target Start/End: Complemental strand, 33088229 - 33088089
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||||| ||| | |||| ||||| ||||||||| ||||||| | |||| ||  ||||  ||||| ||||||||||||| |||   ||||||||||||||    
T  33088229 acacacgcggcgtaccacgtaggctttgaccggttaaaattggccaaaaggactaaagaagcaaatgggctaaatcttaagggaataaaattgtagtttt 33088130  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttagg 313  Q
    | || ||||| | | |||||| ||||||||| |||||||||    
T  33088129 tatatttaggagataaaaattacaagtttttgaaagttagg 33088089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 243 - 332
Target Start/End: Complemental strand, 11190477 - 11190387
Alignment:
Q  243 taaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    |||||||||| || ||||||||| ||||||||||  |||||   ||||||||||| ||||||||| || ||||| ||||||||||||||||    
T  11190477 taaatcttagaggatcaaaattgcagtttttgtatatagggaaccaaaattgcaactttttaaaatttaaggggtgaaaagtgcactttag 11190387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 261
Target Start/End: Complemental strand, 46524701 - 46524613
Alignment:
Q  173 acacacgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaa 261  Q
    ||||||||||||||||| ||| || |||||  ||||||||||| | |||| ||||| | |||||||||||||||||||||||||| ||||    
T  46524701 acacacgtggcatgccaaataagcgttgacttggtcaaaattggccaaaa-gatcacaattgcaaaggggctaaatcttagggggccaaa 46524613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 452 - 517
Target Start/End: Original strand, 49200057 - 49200122
Alignment:
Q  452 tacacttgtgacattgtggttggcctatgtcatcgatgtcattaaccacaatgtcacccaagtatt 517  Q
    ||||||||||||||||||||||| | |||||||| || |||  ||||||||||||||| |||||||    
T  49200057 tacacttgtgacattgtggttggtcaatgtcatcaatatcaccaaccacaatgtcacctaagtatt 49200122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 277
Target Start/End: Complemental strand, 30248241 - 30248170
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtac 277  Q
    |||||||||| | |||| |||||||| |||||||| | |||||||||| |||| |||||||||||||||||||    
T  30248241 gtcaaaattggccaaaatgatcaaagatgcaaaggagttaaatcttagagggt-aaaattgtagtttttgtac 30248170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 205 - 332
Target Start/End: Complemental strand, 31194183 - 31194057
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    |||| ||||| |||||| || ||||| ||||||  ||||||||||||  ||| ||||||| |||||||||||| |  |||| |||| | | || ||||||    
T  31194183 gtcagaattggcaaaaaggaccaaagatgcaaaaaggctaaatcttaaagggccaaaattttagtttttgtacatgtggggccaaattcgtaacttttta 31194084  T
Q  305 aaagttaggggggaaaagtgcactttag 332  Q
    ||||||| ||| ||||||||| ||||||    
T  31194083 aaagtta-gggtgaaaagtgccctttag 31194057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 266
Target Start/End: Original strand, 14512561 - 14512654
Alignment:
Q  173 acacacgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgt 266  Q
    |||||||||||||||||| ||||| |||||  ||||||||||| | |||||| |||   |||||||||||||||||| ||||||  |||||||||    
T  14512561 acacacgtggcatgccacttaggcgttgactaggtcaaaattgcctaaaaag-tcactattgcaaaggggctaaatcataggggaccaaaattgt 14512654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 48441137 - 48441084
Alignment:
Q  263 ttgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggg 316  Q
    ||||||||||| || ||| |||||||||||||||| ||||||||| ||||||||    
T  48441137 ttgtagtttttttatttaaggggtcaaaattgcaattttttaaaacttaggggg 48441084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 514
Target Start/End: Original strand, 6539664 - 6539720
Alignment:
Q  458 tgtgacattgtggttggcctatgtcatcgatgtcattaaccacaatgtcacccaagt 514  Q
    |||||||||||||||| || |||||| | || |||| ||||||||||||||||||||    
T  6539664 tgtgacattgtggttgaccaatgtcaccaatatcatcaaccacaatgtcacccaagt 6539720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 332
Target Start/End: Original strand, 50681632 - 50681703
Alignment:
Q  262 attgtagtttttgtacttagggggtcaaaattgcaagttttt-aaaagttaggggggaaaagtgcactttag 332  Q
    |||||||||||| || |||| | | ||||||||||||||||| |||| | || |||||||||||||||||||    
T  50681632 attgtagtttttatagttagagagccaaaattgcaagtttttgaaaattaagaggggaaaagtgcactttag 50681703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 205 - 332
Target Start/End: Complemental strand, 16290224 - 16290095
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    ||||||||||  ||||| || ||||  || ||||||| ||| |||| || ||| ||||||||||||||| ||| || |||  ||||||||||| |||||     
T  16290224 gtcaaaattggaaaaaatgaccaaatatgtaaaggggttaattcttgggaggttaaaattgtagtttttatacataagggaccaaaattgcaactttttg 16290125  T
Q  305 aaagttag--gggggaaaagtgcactttag 332  Q
    || |||||  |||| |||| ||||||||||    
T  16290124 aacgttagatggggaaaaaatgcactttag 16290095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 452 - 522
Target Start/End: Original strand, 28045418 - 28045487
Alignment:
Q  452 tacacttgtgacattgtggttggcctatgtcatcgatgtcattaaccacaatgtcacccaagtattttccc 522  Q
    ||||||||| |||||||||||||   |||||| | ||||||  ||||||||||||||||||||||| ||||    
T  28045418 tacacttgtaacattgtggttggta-atgtcaccaatgtcaccaaccacaatgtcacccaagtattatccc 28045487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 17505093 - 17505040
Alignment:
Q  203 cggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttaggggg 256  Q
    |||||||||||||||||||| |||||  ||||||| ||||||| |||| |||||    
T  17505093 cggtcaaaattgacaaaaaatatcaatattgcaaatgggctaattcttgggggg 17505040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 457 - 525
Target Start/End: Complemental strand, 5995423 - 5995355
Alignment:
Q  457 ttgtgacattgtggttggcctatgtcatcgatgtcattaaccacaatgtcacccaagtattttcccatt 525  Q
    ||||| ||||||| |||||| |||| | | ||||||| || | | ||||||||||||||||||||||||    
T  5995423 ttgtggcattgtgattggccaatgttaccaatgtcatcaaactctatgtcacccaagtattttcccatt 5995355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 457 - 521
Target Start/End: Complemental strand, 37155100 - 37155036
Alignment:
Q  457 ttgtgacattgtggttggcctatgtcatcgatgtcattaaccacaatgtcacccaagtattttcc 521  Q
    ||||||||||||| |||||| |||||| | ||||||  || | | ||||||||||||||||||||    
T  37155100 ttgtgacattgtgattggccaatgtcaccaatgtcaccaaactctatgtcacccaagtattttcc 37155036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 112; Significance: 3e-56; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 173 - 331
Target Start/End: Original strand, 1829542 - 1829701
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||||||||  |||||| ||||||||||||||||||||||||| |||| || ||||| ||||||||||||||||||||||||| |||||||||||||||    
T  1829542 acacacgtggtgtgccacgtaggcattgaccggtcaaaattgaccaaaatgaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagtttt 1829641  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttaggggg-gaaaagtgcacttta 331  Q
    | ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  1829642 tatacttagggggtcaaaattgcaagtttttaaaagttagggggaaaaaagtgcacttta 1829701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 177 - 332
Target Start/End: Original strand, 16704440 - 16704596
Alignment:
Q  177 acgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgta 276  Q
    ||||||||| |||| ||||||||||||  |||||||||||||||| ||||| |||||||||| ||||||||||||  || ||||||||||||||||||||    
T  16704440 acgtggcataccacgtaggcattgaccaatcaaaattgacaaaaaggatcatagttgcaaagaggctaaatcttaaaggatcaaaattgtagtttttgta 16704539  T
Q  277 cttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    ||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||    
T  16704540 cttagggggtcaaaattgcaagtttttgaaagttaagggaggaaaagtgcactttag 16704596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 10784756 - 10784594
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaag-atcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    |||||| |||| |||| | |||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  10784756 acacacatggcgtgccccgtaggcattaaccggtcaaaattgataaaaaaggatcaaagttgcaaaggggctaaatctttgggggccaaaattgtagttt 10784657  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagtta--ggggggaaaagtgcactttag 332  Q
    || |||||||||||| ||||||||||||||||||||||||  || ||||||||||||||||||    
T  10784656 ttatacttagggggttaaaattgcaagtttttaaaagttaagggagggaaaagtgcactttag 10784594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 173 - 321
Target Start/End: Original strand, 10785852 - 10786000
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||||||||| |||||  || ||||||||  ||||||||||  ||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  10785852 acacacgtggcgtgccatgtatgcattgactagtcaaaattggtaaaaaggatcaaagttgcaaaggggctaaatcttaaggggttaaaattgtagtttt 10785951  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaa 321  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||    
T  10785952 tgtacttagggggttaaaattgcaaatttttaaaagttaggggggaaaa 10786000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 179 - 331
Target Start/End: Original strand, 26574999 - 26575150
Alignment:
Q  179 gtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtact 278  Q
    |||||||||||| ||| ||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||||||| |||||||||||||||||||||    
T  26574999 gtggcatgccacgtagacattgaccggtcaaaattggcaaaaaggatcaaagttgcaaaggagttaaatcttagggggccaaaattgtagtttttgtact 26575098  T
Q  279 tagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 331  Q
    || ||||| |||||||||||||||| |||||||| | || |||||||||||||    
T  26575099 taaggggttaaaattgcaagtttttgaaagttagagagg-aaagtgcacttta 26575150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 192 - 332
Target Start/End: Complemental strand, 26574761 - 26574621
Alignment:
Q  192 taggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaa 291  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||| || ||||||    
T  26574761 taggcattaatcggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttaagggatcaaaa-tgtagtttttgtacttagaggttcaaaa 26574663  T
Q  292 ttgcaagtttttaaaagttag-gggggaaaagtgcactttag 332  Q
    |||||||||||| |||||||| || || ||| ||||||||||    
T  26574662 ttgcaagtttttgaaagttagaggtgggaaattgcactttag 26574621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 14823514 - 14823675
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| ||||  || || ||||||| ||  ||||||||||||||| ||||||||||||||     
T  14823514 acacacgtggcgtgccacgtaggcattgaccggtcaaaattgaccaaaagaattaaggttgcaacggttctaaatcttagggggccaaaattgtagtttc 14823613  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttagggggg--aaaagtgcactttag 332  Q
    |||||||| ||||  |||||||||||||||| ||| ||| |||||  |||||||||||||||    
T  14823614 tgtacttaaggggctaaaattgcaagttttttaaaattaagggggaaaaaagtgcactttag 14823675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 7315042 - 7314882
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||| |||||| ||||| ||||    |||||||||||| |||| || ||||| ||||||||||||||||||||||||||||||||||| ||||    
T  7315042 acacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaatgaccaaagatgcaaaggggctaaatcttagggggtcaaaattgttgttt 7314943  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttag 332  Q
    |  |||||| |||| ||||||||||||||||| |||||||| ||||||||||||||||||||    
T  7314942 tgatactta-ggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttag 7314882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 204 - 332
Target Start/End: Complemental strand, 3721743 - 3721614
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    |||||||||||   |||| || ||||||||||| |||||||||||||| |||||| ||||| | ||||| ||||||||||||||||||||||||||||||    
T  3721743 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaaggggtctaaattatggttttggtacttagggggtcaaaattgcaagttttt 3721644  T
Q  304 aaaagttag-gggggaaaagtgcactttag 332  Q
     |||||||| ||||||||||||||||||||    
T  3721643 gaaagttagagggggaaaagtgcactttag 3721614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 204 - 332
Target Start/End: Complemental strand, 8659396 - 8659267
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    |||||||||||   |||| || ||||||||||| ||||||||||||||||||| | ||||||| ||||| |||||||||||| |||||||||||||||||    
T  8659396 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagttttt 8659297  T
Q  304 aaaagttag-gggggaaaagtgcactttag 332  Q
     |||||||| ||||||||||||||||||||    
T  8659296 gaaagttagagggggaaaagtgcactttag 8659267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 173 - 329
Target Start/End: Complemental strand, 29473239 - 29473082
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||| |||||||||||| ||||||||||||||| |||||||||||||| ||||||| |||||||||||| || |||| | ||| |||||||||  ||||    
T  29473239 acacatgtggcatgccacgtaggcattgaccggtaaaaattgacaaaaaggatcaaaattgcaaaggggccaattcttggagggccaaaattgttatttt 29473140  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactt 329  Q
    ||| | |||||   ||||||||||| ||||||||| || |||||||||||||||||||    
T  29473139 tgttcatagggaaccaaaattgcaactttttaaaacttaaggggggaaaagtgcactt 29473082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 173 - 328
Target Start/End: Complemental strand, 14822522 - 14822366
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||||||||| |||||| || |||||||||||||||||| ||  |||| ||| |||||||||| | | ||||||||||||||| ||||||||||||||     
T  14822522 acacacgtggcgtgccacgtaagcattgaccggtcaaaatagattaaaaggattaaagttgcaatgagactaaatcttagggggccaaaattgtagtttc 14822423  T
Q  273 tgtacttagggggtcaaaattgcaagttttt-aaaagttaggggggaaaagtgcact 328  Q
    | |||||| |||| ||||||||||||||||| |||| | ||||| ||||||||||||    
T  14822422 tatacttatggggccaaaattgcaagtttttgaaaattaaggggtgaaaagtgcact 14822366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 204 - 332
Target Start/End: Original strand, 8660174 - 8660302
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    |||||||||||   |||| |||||||||||||| || |||||||||||||||| | ||||||| ||||| ||||||| ||||||||||||||||||||||    
T  8660174 ggtcaaaattggtcaaaaggatcaaagttgcaatggagctaaatcttaggggggctaaattgtggttttggtactta-ggggtcaaaattgcaagttttt 8660272  T
Q  304 aaaagttagg-ggggaaaagtgcactttag 332  Q
     ||||||||| |||||||||||||||||||    
T  8660273 gaaagttaggaggggaaaagtgcactttag 8660302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 204 - 332
Target Start/End: Complemental strand, 27437959 - 27437830
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||| | |||| || |||||||||||||| ||||||||||||||||||||||||||||||||| |   ||||||| ||||||||||| |||||    
T  27437959 ggtcaaaattggccaaaaggaccaaagttgcaaaggagctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttt 27437860  T
Q  304 aaaagtt-aggggggaaaagtgcactttag 332  Q
     |||||| ||||| ||||||||||||||||    
T  27437859 taaagttaaggggagaaaagtgcactttag 27437830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 226 - 332
Target Start/End: Complemental strand, 8821982 - 8821875
Alignment:
Q  226 caaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttag-gggggaaaagtg 324  Q
    ||||||||||| || |||||||||||||||| | ||||||| ||||| |||||||||||| ||||||||||||||||| |||||||| ||||||||||||    
T  8821982 caaagttgcaatggagctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtg 8821883  T
Q  325 cactttag 332  Q
    ||||||||    
T  8821882 cactttag 8821875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 7316232 - 7316393
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||| |||||| ||||| ||||    |||||||||||| |||| || || || |||||||||||||||||||| |||| ||||||||| ||||    
T  7316232 acacacgtggcttgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccatagatgcaaaggggctaaatcttaaggggccaaaattgtggttt 7316331  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
       || |||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  7316332 caatatttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttag 7316393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 204 - 331
Target Start/End: Original strand, 34834549 - 34834677
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    |||||||||||   |||| || ||||||||||| ||||||||||||||||||| | ||||||| |||||  |||||||| | ||||||||||||||||||    
T  34834549 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttgatacttaggagatcaaaattgcaagttttt 34834648  T
Q  304 aaaagttaggg-gggaaaagtgcacttta 331  Q
     |||||||||| |||||||||||||||||    
T  34834649 gaaagttagggagggaaaagtgcacttta 34834677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 226 - 332
Target Start/End: Original strand, 8822785 - 8822892
Alignment:
Q  226 caaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtg 324  Q
    |||||||||||  |||||||||||||||||| | ||||||| ||||| |||||||||||||||||||||||||||||| |||||| | | ||||||||||    
T  8822785 caaagttgcaattgggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttaaagagggaaaagtg 8822884  T
Q  325 cactttag 332  Q
    ||||||||    
T  8822885 cactttag 8822892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 233 - 332
Target Start/End: Original strand, 27322067 - 27322166
Alignment:
Q  233 gcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    ||||||||||||| ||||||||||  |||||||| ||||| |||||||||||| |||||||||||| |||| |||| |||||||||||||||||||||||    
T  27322067 gcaaaggggctaattcttagggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 27322166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 12382649 - 12382810
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||||||||| ||| || ||||||  |||||||||  | |||| || ||||| |||||| ||| |||||||| |||| |||||||| ||||||    
T  12382649 acacacgtggcatgccaaataagcgttgaccaagtcaaaattagctaaaaggaccaaagatgcaaaagggttaaatctttggggatcaaaattatagttt 12382748  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttag 332  Q
    |  ||||||||||||||||||| ||| ||||||||| |||| || |||||||||||||||||    
T  12382749 taatacttagggggtcaaaattacaaatttttaaaaattagaggtggaaaagtgcactttag 12382810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 213 - 332
Target Start/End: Original strand, 3333005 - 3333125
Alignment:
Q  213 tgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttag 312  Q
    |||| |||| ||||||||||||||||||||||||| |||| |||| ||||||||||||||||||| ||||||| |||||| |||| ||||| ||| ||||    
T  3333005 tgactaaaaggatcaaagttgcaaaggggctaaattttagagggttaaaattgtagtttttgtacatagggggccaaaatcgcaactttttcaaacttag 3333104  T
Q  313 -gggggaaaagtgcactttag 332  Q
      ||||||||||||| |||||    
T  3333105 aaggggaaaagtgcaatttag 3333125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 204 - 331
Target Start/End: Complemental strand, 5658887 - 5658759
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||| |||||    ||||||  || |||||    
T  5658887 ggtcaaaattgaccaaaaggatcaaagttgcaaatgggctaaatcttaagggatcaaaattgtagtttttgtacatagggaactaaaattataacttttt 5658788  T
Q  304 aaaagtt-aggggggaaaagtgcacttta 331  Q
    |||| || ||||||||||| |||||||||    
T  5658787 aaaacttaaggggggaaaaatgcacttta 5658759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 205 - 316
Target Start/End: Complemental strand, 17496928 - 17496816
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtc-aaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    |||||||||||  |||| || ||||| ||||||| || |||||||||||||| | ||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  17496928 gtcaaaattgatcaaaaggaccaaagatgcaaagaggttaaatcttaggggggccaaaattgcagtttttgtacttagagggttaaaattgtaagttttt 17496829  T
Q  304 aaaagttaggggg 316  Q
     ||||||||||||    
T  17496828 gaaagttaggggg 17496816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 217 - 332
Target Start/End: Complemental strand, 16703685 - 16703572
Alignment:
Q  217 aaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggg 316  Q
    ||||| |||||||||||  |||||| ||||| ||||||||  |||||||||||||||||| |||  || |||||||||||||||||| |||| || ||||    
T  16703685 aaaaaggatcaaagttgggaaggggttaaattttagggggctaaaattgtagtttttgtattta-tggatcaaaattgcaagtttttgaaagata-gggg 16703588  T
Q  317 gaaaagtgcactttag 332  Q
    ||||||||||||||||    
T  16703587 gaaaagtgcactttag 16703572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 218 - 332
Target Start/End: Complemental strand, 3333265 - 3333151
Alignment:
Q  218 aaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagggggg 317  Q
    ||||| ||||||||||||||| ||||||||| ||||| | ||||||| |||||||| | | |||||||||||| |||||| ||||| ||| |||  ||||    
T  3333265 aaaaaaatcaaagttgcaaagaggctaaatcgtagggagccaaaattatagtttttattcatagggggtcaaatttgcaattttttcaaacttatagggg 3333166  T
Q  318 aaaagtgcactttag 332  Q
    |||||| ||||||||    
T  3333165 aaaagttcactttag 3333151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 260 - 332
Target Start/End: Original strand, 3722533 - 3722606
Alignment:
Q  260 aaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggg-gggaaaagtgcactttag 332  Q
    ||||||| ||||| |||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  3722533 aaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggagggaaaagtgcactttag 3722606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 234 - 310
Target Start/End: Complemental strand, 12350898 - 12350823
Alignment:
Q  234 caaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtt 310  Q
    |||||||||||||||||||||||| ||||||||||||||| ||| || |||||||||||||||||||| | ||||||    
T  12350898 caaaggggctaaatcttagggggttaaaattgtagtttttatacata-ggggtcaaaattgcaagtttattaaagtt 12350823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 218 - 329
Target Start/End: Complemental strand, 6840309 - 6840199
Alignment:
Q  218 aaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagggggg 317  Q
    |||| |||||||| |||||||||  |||||||||| ||||||||||| ||||||||||| ||| |||| |||||| |||| ||||| ||| ||| |||||    
T  6840309 aaaaggatcaaagatgcaaagggattaaatcttagagggtcaaaattatagtttttgtatttaaggggccaaaatcgcaactttttgaaacttaaggggg 6840210  T
Q  318 aaaagtgcactt 329  Q
     |||||||||||    
T  6840209 -aaagtgcactt 6840199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 204 - 332
Target Start/End: Original strand, 6842253 - 6842382
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||| | |||| |||||||| ||||||  | |||||| ||| ||    |||||||||||||||| || ||||||| ||||||||||| |||||    
T  6842253 ggtcaaaattggccaaaaggatcaaagatgcaaacagactaaattttaaggaactaaaattgtagtttttgcacatagggggccaaaattgcaacttttt 6842352  T
Q  304 aaaagttag-gggggaaaagtgcactttag 332  Q
     ||| |||| ||||||||||||||||||||    
T  6842353 gaaacttagagggggaaaagtgcactttag 6842382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 193 - 311
Target Start/End: Original strand, 26949144 - 26949259
Alignment:
Q  193 aggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaat 292  Q
    |||||||||| ||||||||||||  ||||| |  |||| |||||||||| ||||||||||  | | ||||||||||||||| ||||||||||  ||||||    
T  26949144 aggcattgactggtcaaaattgatcaaaaacactaaagatgcaaaggggttaaatcttagaagattaaaattgtagtttttatacttagggg--caaaat 26949241  T
Q  293 tgcaagtttttaaaagtta 311  Q
    ||||| ||||| |||||||    
T  26949242 tgcaa-tttttgaaagtta 26949259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 226 - 317
Target Start/End: Complemental strand, 34831011 - 34830920
Alignment:
Q  226 caaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagggggg 317  Q
    ||||||||||| | ||||||||||||||||| | ||||||| ||||| |||||||||||| ||||  ||||| ||||| |||||| ||||||    
T  34831011 caaagttgcaatgtggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaatatgcaaatttttgaaagttcgggggg 34830920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 205 - 275
Target Start/End: Original strand, 3333496 - 3333566
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgt 275  Q
    |||||||||| | |||| |||||||||||| ||||||||||||| ||| |||| |||||||||||||||||    
T  3333496 gtcaaaattggccaaaaggatcaaagttgcgaaggggctaaatcatagagggttaaaattgtagtttttgt 3333566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 233 - 332
Target Start/End: Complemental strand, 27318418 - 27318317
Alignment:
Q  233 gcaaaggggctaaatcttagggggtca--aaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcacttt 330  Q
    ||||||||||||| ||||||||||     ||||||| ||||| |||||||||||| |||||||||||| |||| |||| ||||||| ||| |||||||||    
T  27318418 gcaaaggggctaattcttaggggggggggaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggggaaaaggtgcacttt 27318319  T
Q  331 ag 332  Q
    ||    
T  27318318 ag 27318317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 231 - 332
Target Start/End: Original strand, 30495694 - 30495795
Alignment:
Q  231 ttgcaaaggggctaaatcttag-ggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactt 329  Q
    ||||||| |||||||||||||| |||| |||||||||  ||||||||| |||||| | ||||| |||| ||||| ||||||| |||| ||||||||||||    
T  30495694 ttgcaaatgggctaaatcttagaggggccaaaattgttatttttgtacataggggattaaaatcgcaactttttgaaagtta-ggggaaaaagtgcactt 30495792  T
Q  330 tag 332  Q
    |||    
T  30495793 tag 30495795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 179 - 265
Target Start/End: Original strand, 26717057 - 26717144
Alignment:
Q  179 gtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattg 265  Q
    |||||||||||  || ||||||||  ||||||||||||  |||| ||||||||||||||| | ||||||||||| |||||||||||||    
T  26717057 gtggcatgccaattaagcattgacttggtcaaaattgatcaaaaggatcaaagttgcaaaagagctaaatcttaaggggtcaaaattg 26717144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 297
Target Start/End: Complemental strand, 15306024 - 15305912
Alignment:
Q  183 catgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttag 281  Q
    |||||||||||||| ||||||  |||||||||| |||||  | |||| |||||||||||| ||||| ||||||| |||||||| |  ||||| || ||||    
T  15306024 catgccacataggcgttgacctagtcaaaattggcaaaa--ggtcaatgttgcaaaggggttaaattttaggggatcaaaattttcattttttta-ttag 15305928  T
Q  282 ggggtcaaaattgcaa 297  Q
    |||| |||||||||||    
T  15305927 ggggccaaaattgcaa 15305912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 316
Target Start/End: Complemental strand, 30494660 - 30494575
Alignment:
Q  231 ttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggg 316  Q
    |||||||||||||||||||||||  | ||||||  |||||||| ||| ||||| | |||||| | || ||||| ||||||||||||    
T  30494660 ttgcaaaggggctaaatcttaggaagccaaaatcatagtttttatacatagggtgccaaaatcgtaactttttgaaagttaggggg 30494575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 26717127 - 26717183
Alignment:
Q  277 cttagggggtcaaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttag 332  Q
    |||| |||||||||||||||||||| | ||| ||| |||||||||||||||||||||    
T  26717127 cttaaggggtcaaaattgcaagtttctgaaacttaaggggggaaaagtgcactttag 26717183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 522
Target Start/End: Complemental strand, 2543802 - 2543734
Alignment:
Q  453 acacttgtgacattgtggttggcctatgtcatcgatgtcattaaccacaatgtcacccaagtattttccc 522  Q
    |||||||| |||||||||||||   |||||| | ||||||  ||||||||||||||||||||||| ||||    
T  2543802 acacttgtaacattgtggttggta-atgtcaccaatgtcaccaaccacaatgtcacccaagtattatccc 2543734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 256
Target Start/End: Original strand, 22418841 - 22418917
Alignment:
Q  180 tggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttaggggg 256  Q
    |||||||||||||||   |||||  ||||||||||||| |||| | ||| | ||||||||||||||||||||||||||    
T  22418841 tggcatgccacatagtggttgacttggtcaaaattgaccaaaagg-tcacaattgcaaaggggctaaatcttaggggg 22418917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 105; Significance: 4e-52; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 17632 - 17472
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||| ||||||||||||| |||||||||||||||||||||||  |||||||||| || ||||||||||| ||| |||| ||||| |||||||||||||||    
T  17632 acactcgtggcatgccacgtaggcattgaccggtcaaaattggtaaaaaagatcgaaattgcaaaggggataattcttggggggccaaaattgtagtttt 17533  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    ||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||    
T  17532 tgtacttagggggccaaaattgcaagtttttaaaagttaagggggaaaaagtgcactttag 17472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 185 - 332
Target Start/End: Original strand, 18727 - 18875
Alignment:
Q  185 tgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggg 284  Q
    |||||| ||||||||||||||||||||||||| |||| ||| |||||||||| |||||||||| ||| |||| ||||||| |||||||||||| ||||||    
T  18727 tgccacgtaggcattgaccggtcaaaattgaccaaaatgattaaagttgcaatggggctaaattttaaggggccaaaattatagtttttgtacctagggg 18826  T
Q  285 gtcaaaattgcaagtttttaaaagttagg-ggggaaaagtgcactttag 332  Q
      ||||||||||| ||||||||||||||| ||| |||||||||||||||    
T  18827 accaaaattgcaaatttttaaaagttaggagggaaaaagtgcactttag 18875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 2e-51; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 173 - 331
Target Start/End: Original strand, 42886225 - 42886384
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||||||||||||||||||| |||||| |||||||||||||| |||| |||||||| |||||| ||||||||||||||||||  ||||||||||||||    
T  42886225 acacacgtggcatgccacatagacattgatcggtcaaaattgaccaaaatgatcaaagatgcaaatgggctaaatcttagggggctaaaattgtagtttt 42886324  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttagg-ggggaaaagtgcacttta 331  Q
    |||| |||||||||||||||||||| ||||| ||||||||| || |||||||||||||||    
T  42886325 tgtatttagggggtcaaaattgcaaatttttgaaagttaggaggagaaaagtgcacttta 42886384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 180 - 329
Target Start/End: Original strand, 14999101 - 14999249
Alignment:
Q  180 tggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtactt 279  Q
    ||||||||||| || ||||||||||||||||||||||  ||| || ||||| ||||||||||||||||||||||| | ||||||||||||||||||| ||    
T  14999101 tggcatgccacgtaagcattgaccggtcaaaattgacctaaaggaacaaagatgcaaaggggctaaatcttagggcgccaaaattgtagtttttgtattt 14999200  T
Q  280 agggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactt 329  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  14999201 agggggtcaaaattgcaagttttgaaaa-ttaggggggaaaagtgcactt 14999249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 31659786 - 31659624
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||||||||||  | || |||||   |||||||||||| |||| ||||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  31659786 acacacgtggcatgccacgcatgcgttgactatgtcaaaattgaccaaaaggatcaaatttgcaatggggctaaatcttagggggccaaaattgtagttt 31659687  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttagggggg--aaaagtgcactttag 332  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||  |||||||||||||||    
T  31659686 ttgtacttagggggtcaaaattgtaagtttttgaaagttagggggggtaaaagtgcactttag 31659624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 205 - 332
Target Start/End: Complemental strand, 18371554 - 18371426
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    |||||||||||| |||| |||||||| |||||| | |||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||     
T  18371554 gtcaaaattgaccaaaaggatcaaagatgcaaatgtgctaaatcttagggggccaaaattgtagtttttgtacttaaggggccaaaattgcaagtttttg 18371455  T
Q  305 aaagttagg-ggggaaaagtgcactttag 332  Q
    ||||||||| |||||||||||||||||||    
T  18371454 aaagttaggaggggaaaagtgcactttag 18371426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 205 - 332
Target Start/End: Complemental strand, 7500584 - 7500457
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    |||||||||||| |||| |||||||| ||||||||||||||||||||||||| ||||||||| |||| | ||||||| || ||||||||||||||||||     
T  7500584 gtcaaaattgaccaaaaggatcaaagatgcaaaggggctaaatcttagggggccaaaattgtggtttctatacttagaggatcaaaattgcaagtttttg 7500485  T
Q  305 aaagttaggggggaaaagtgcactttag 332  Q
    ||||||| ||||||||||||||||||||    
T  7500484 aaagttaagggggaaaagtgcactttag 7500457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 173 - 321
Target Start/End: Original strand, 18372395 - 18372544
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    |||||||||||| ||||||||| | ||||    |||||||||||| |||| || ||||| | ||||||||||||||||||||||| ||||||||||||||    
T  18372395 acacacgtggcaggccacatagacgttgaataagtcaaaattgaccaaaaggaccaaagatacaaaggggctaaatcttagggggccaaaattgtagttt 18372494  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaa 321  Q
    |||||||||||||| ||||||||||||||||| ||| |||||||||||||    
T  18372495 ttgtacttagggggccaaaattgcaagtttttgaaaattaggggggaaaa 18372544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 7501790 - 7501951
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||| |||||| ||||||||||    |||||||||||| |||| || ||||| ||||||||||||| |||||| |||| ||||||||| ||||    
T  7501790 acacacgtggcctgccacgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctacatcttaaggggccaaaattgttgttt 7501889  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttag 332  Q
    |  ||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||    
T  7501890 tgatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttag 7501951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 17781824 - 17781663
Alignment:
Q  173 acacacgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||| ||||||||||| || ||| |||||  |||||||||||   |||| || ||||||||||| |||||||||||||||||||   ||||||| ||||    
T  17781824 acacatgtggcatgccaaatcggcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttt 17781725  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttagg-ggggaaaagtgcactttag 332  Q
    | |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  17781724 tggtacttagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttag 17781663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 204 - 332
Target Start/End: Original strand, 3227564 - 3227693
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||  |||| || ||||||||||| ||||||||||||||||||  | ||||||| ||||| |||||||||||| |||||||||||||||||    
T  3227564 ggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggtgctaaattgtggttttggtacttagggggccaaaattgcaagttttt 3227663  T
Q  304 aaaagtta-ggggggaaaagtgcactttag 332  Q
     ||||||| |||||||||||||||||||||    
T  3227664 gaaagttagggggggaaaagtgcactttag 3227693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 204 - 332
Target Start/End: Complemental strand, 31949453 - 31949324
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||  |||| || ||||||||||| ||||||||||||||||||| | ||||||| ||||| |||||||||||| |||||||||||||||||    
T  31949453 ggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagttttt 31949354  T
Q  304 aaaagttaggg-gggaaaagtgcactttag 332  Q
     ||| |||||| ||||||||||||||||||    
T  31949353 gaaaattagggagggaaaagtgcactttag 31949324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 204 - 332
Target Start/End: Complemental strand, 127466 - 127339
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    |||||||||||   |||| || |||||||||||  |||||||||||||||||| | ||||||| ||||| |||||||||||  |||||||||||||||||    
T  127466 ggtcaaaattggtcaaaaggaccaaagttgcaattgggctaaatcttaggggg-ctaaattgtggttttggtacttaggggaccaaaattgcaagttttt 127368  T
Q  304 aaaagttaggggggaaaagtgcactttag 332  Q
     ||||||||||||||||||||||||||||    
T  127367 gaaagttaggggggaaaagtgcactttag 127339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 204 - 332
Target Start/End: Complemental strand, 3227238 - 3227110
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    |||||||||||   |||| || ||||||||||| |||||||||||||| |||| | ||||||| ||||| |||||||||||| |||||||||||||||||    
T  3227238 ggtcaaaattgttcaaaaggaccaaagttgcaatggggctaaatcttaagggggctaaattgtggttttggtacttagggggccaaaattgcaagttttt 3227139  T
Q  304 aaaagttaggggggaaaagtgcactttag 332  Q
     ||| ||||||||| ||||||||||||||    
T  3227138 gaaaattagggggggaaagtgcactttag 3227110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 205 - 332
Target Start/End: Original strand, 22630423 - 22630551
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    |||||||||||| |||| || ||||| | ||||| |||| ||||||||||||  |||||||||||||||||| |||||||| |||||||||||||||||     
T  22630423 gtcaaaattgaccaaaaggaccaaagatacaaagaggctgaatcttagggggctaaaattgtagtttttgtaattagggggccaaaattgcaagtttttg 22630522  T
Q  305 aaagtta-ggggggaaaagtgcactttag 332  Q
    ||||||| || ||||||||||||||||||    
T  22630523 aaagttatggagggaaaagtgcactttag 22630551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 173 - 303
Target Start/End: Complemental strand, 22629649 - 22629518
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    |||||||||||| ||||| ||||| ||||    |||||||||||| |||| || ||||| ||||||||||||||||||||||||| ||||||||||||||    
T  22629649 acacacgtggcaggccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagttt 22629550  T
Q  272 ttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||| || ||||||| |||||||||    
T  22629549 ttgtacttaggaggccaaaattacaagttttt 22629518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 179 - 331
Target Start/End: Original strand, 128545 - 128699
Alignment:
Q  179 gtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtac 277  Q
    ||||||||||| ||  ||||||||  |||||||||||   |||| | |||||||||||| |||||| |||||||||||| | ||||||| ||||| ||||    
T  128545 gtggcatgccaaatcagcattgactaggtcaaaattggttaaaagggtcaaagttgcaatggggctgaatcttaggggggctaaattgtggttttggtac 128644  T
Q  278 ttagggggtcaaaattgcaagtttttaaaagtta-ggggggaaaagtgcacttta 331  Q
    |||||||||||||||||||| ||||| ||||||| || |||||||||||||||||    
T  128645 ttagggggtcaaaattgcaaatttttgaaagttatggtgggaaaagtgcacttta 128699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 207 - 332
Target Start/End: Complemental strand, 21505542 - 21505418
Alignment:
Q  207 caaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaa 306  Q
    |||||||| | |||| || ||||| |||||||||||||||||||| ||||||||||||||||||||||||  | ||||| |||||| |||| ||||| ||    
T  21505542 caaaattgtccaaaaggaccaaagatgcaaaggggctaaatcttatggggtcaaaattgtagtttttgtatatcgggggccaaaatcgcaactttttgaa 21505443  T
Q  307 agttaggggggaaaagtgcactttag 332  Q
    |||||| |||||||||||||||||||    
T  21505442 agttag-ggggaaaagtgcactttag 21505418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 204 - 332
Target Start/End: Original strand, 31949772 - 31949901
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||  |||| || ||||||||||| ||||||||||||||||||  | ||||||| ||||| ||| |||||||| |||||||||||||||||    
T  31949772 ggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggtgctaaattgtggttttggtatttagggggccaaaattgcaagttttt 31949871  T
Q  304 aaaagtta-ggggggaaaagtgcactttag 332  Q
     ||||||| |||||||| ||||||||||||    
T  31949872 gaaagttagggggggaagagtgcactttag 31949901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 204 - 332
Target Start/End: Original strand, 47525337 - 47525466
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    |||||||||||   |||| || ||||||||||| ||||||||||||||||||| | ||||||| |||||  |||||||||||  ||||||||||||||||    
T  47525337 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttgatacttagggggctaaaattgcaagttttt 47525436  T
Q  304 aaaagttag-gggggaaaagtgcactttag 332  Q
     |||||||| ||||||||||||||||||||    
T  47525437 gaaagttagagggggaaaagtgcactttag 47525466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 239 - 332
Target Start/End: Original strand, 17782558 - 17782652
Alignment:
Q  239 gggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttag 332  Q
    |||||||||||||||||| | ||||||| ||||| |||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||    
T  17782558 gggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttag 17782652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 173 - 312
Target Start/End: Complemental strand, 6618370 - 6618230
Alignment:
Q  173 acacacgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||| |||||||||||||||||| |||||  ||||||||||||  |||| ||||||| |||||| | ||| ||||||||||| |||||||||||| |||    
T  6618370 acacatgtggcatgccacataggcgttgactaggtcaaaattgatcaaaatgatcaaatttgcaatgaggcaaaatcttagggagtcaaaattgtaattt 6618271  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttag 312  Q
    || || ||| ||  ||||||||||||||||| |||||||||    
T  6618270 ttatatttaaggaatcaaaattgcaagttttgaaaagttag 6618230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 173 - 315
Target Start/End: Complemental strand, 47369944 - 47369801
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||| |||||||||||| ||||    |||||||||||| ||||  |  |||| |||||||||||||||||||| |||| ||||||| ||||||    
T  47369944 acacacgtggcctgccacataggcgttgaataagtcaaaattgaccaaaataactaaagatgcaaaggggctaaatcttaaggggccaaaattatagttt 47369845  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttagggg 315  Q
    ||||||||| | ||  |||||||||||||||| |||||||||||    
T  47369844 ttgtacttatgaggctaaaattgcaagtttttgaaagttagggg 47369801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 231 - 332
Target Start/End: Original strand, 48934900 - 48935002
Alignment:
Q  231 ttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactt 329  Q
    ||||||| ||||||| |||| |||| |||||||| |||||||||||||||| ||||||||||| ||||||||| ||||||||||| |||||| |||||||    
T  48934900 ttgcaaatgggctaattcttgggggatcaaaattttagtttttgtacttagagggtcaaaattacaagtttttgaaagttaggggtggaaaaatgcactt 48934999  T
Q  330 tag 332  Q
    |||    
T  48935000 tag 48935002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 11658542 - 11658381
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||| ||||| |||||| ||||||| ||||||||||||| ||| ||  |   || |||||||||||| ||||  |||  ||||||||||||||    
T  11658542 acacacgtggcctgccatataggcgttgaccgagtcaaaattgacataaaggactactattacaaaggggctaattcttgagggaccaaaattgtagttt 11658443  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    |||||| |||||||  ||||||||| |||||| |||||| |||||||||||||||| |||||    
T  11658442 ttgtacatagggggctaaaattgcatgtttttgaaagttaaggggggaaaagtgcaatttag 11658381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 34352725 - 34352885
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||||||||| || ||| ||||||||||||||||||||||| | |||| ||| ||||||||||   || |||||||||| ||| ||||||| ||||||     
T  34352725 acacacgtggcgtgtcacgtaggcattgaccggtcaaaattggccaaaatgattaaagttgcaataaggttaaatcttagagggccaaaattatagttta 34352824  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttag 332  Q
    |||||||| |||  |||||| | |||||||| ||| |||| || | |||||||||||||||    
T  34352825 tgtacttaagggaccaaaatagaaagtttttgaaaattagaggtgaaaaagtgcactttag 34352885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 198 - 331
Target Start/End: Original strand, 11662515 - 11662649
Alignment:
Q  198 ttgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaa 297  Q
    ||||||| |||||||||||| ||| ||  |   ||||||||||||||| |||| ||||| ||||||| |||||||||||| ||| | |  ||||||||||    
T  11662515 ttgaccgatcaaaattgacataaaggactactattgcaaaggggctaattcttggggggccaaaattatagtttttgtacatagagagctaaaattgcaa 11662614  T
Q  298 gtttttaaaagtt-aggggggaaaagtgcacttta 331  Q
    |||||| |||||| ||||||||||| |||||||||    
T  11662615 gtttttgaaagttaaggggggaaaaatgcacttta 11662649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 14998141 - 14998048
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgta 267  Q
    ||||||||||||||| |  ||||||||||||| | ||||||||| |||| || ||||| ||||||||||||||||||||||||| ||||||||||    
T  14998141 acacacgtggcatgc-atgtaggcattgaccgattaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgta 14998048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 195 - 332
Target Start/End: Complemental strand, 48933805 - 48933670
Alignment:
Q  195 gcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattg 294  Q
    ||||||| ||||||||||||  ||||| ||||||||||||| |||   ||||||||| ||| |||||||||||||||||||   || ||| |||||||||    
T  48933805 gcattgagcggtcaaaattggaaaaaaggatcaaagttgcagagga--taaatcttaagggatcaaaattgtagtttttgtttataagggatcaaaattg 48933708  T
Q  295 caagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    ||||||||||||| |||   ||||||||| || |||||    
T  48933707 caagtttttaaaatttaaaagggaaaagtacattttag 48933670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 187 - 264
Target Start/End: Original strand, 770714 - 770791
Alignment:
Q  187 ccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaatt 264  Q
    |||| ||| ||||||||||||||||||||| |||| |||||||| |||||||||||||||| |||||||| |||||||    
T  770714 ccacgtagacattgaccggtcaaaattgaccaaaatgatcaaagatgcaaaggggctaaattttagggggccaaaatt 770791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 46482760 - 46482599
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    |||||| |||| |||||| ||||||||||    |||||||||||| |||| ||| |||  |||||||| | ||||||||||||| | |||||| ||||||    
T  46482760 acacacatggcttgccacgtaggcattgaataagtcaaaattgaccaaaaggataaaaaatgcaaaggagataaatcttaggggattaaaattatagttt 46482661  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttagg-ggggaaaagtgcactttag 332  Q
    |||||| |||||||||||| || ||| ||||| ||| ||||| || ||||| ||||||||||    
T  46482660 ttgtacatagggggtcaaatttacaaatttttgaaaattaggaggagaaaaatgcactttag 46482599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 261 - 332
Target Start/End: Original strand, 34174010 - 34174081
Alignment:
Q  261 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    |||||| ||||| |||||||||||| |||||||||||| |||| |||| |||||||||||||||||||||||    
T  34174010 aattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttag 34174081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 173 - 316
Target Start/End: Complemental strand, 34351650 - 34351511
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||||||||| |||||| |||||||||||||||||||||||   |||    | || |||||||   |||||||||||| ||||| |||||||||||||     
T  34351650 acacacgtggcgtgccacgtaggcattgaccggtcaaaattggtcaaa----ttaaggttgcaattaggctaaatcttaaggggttaaaattgtagtttc 34351555  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttaggggg 316  Q
    | ||||| | | | ||||||||||||||||| ||||| ||||||    
T  34351554 tatacttggagagccaaaattgcaagtttttgaaagtcaggggg 34351511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 197 - 332
Target Start/End: Complemental strand, 769551 - 769415
Alignment:
Q  197 attgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgca 296  Q
    ||||| ||||||||||||   |||| |||||||| |||||| ||| ||| ||| |||| | ||||||| || ||||||||||||||  ||||||||||||    
T  769551 attgatcggtcaaaattgggcaaaaggatcaaagatgcaaatgggttaattctaagggagccaaaattataatttttgtacttaggatgtcaaaattgca 769452  T
Q  297 agtttttaaaagtta-ggggggaaaagtgcactttag 332  Q
    ||||||| ||| |||  || |||||| ||||||||||    
T  769451 agtttttgaaaattacaggtggaaaattgcactttag 769415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 205 - 332
Target Start/End: Original strand, 30439329 - 30439456
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    |||||||||||  |||| || | ||| ||||||||||||||||||||||||   |||||||||||||||| || ||||   ||||||| | || |||||     
T  30439329 gtcaaaattgagcaaaatgaccgaaggtgcaaaggggctaaatcttaggggactaaaattgtagtttttgaacataggaaatcaaaatcgtaactttttg 30439428  T
Q  305 aaagttaggggggaaaagtgcactttag 332  Q
    ||||||| ||||  ||||||||||||||    
T  30439429 aaagttaaggggagaaagtgcactttag 30439456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 261 - 327
Target Start/End: Complemental strand, 47524599 - 47524532
Alignment:
Q  261 aattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttag-gggggaaaagtgcac 327  Q
    |||||| ||||| |||||||||||| ||||||||||||||||| |||||||| |||||||||||||||    
T  47524599 aattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcac 47524532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 263 - 332
Target Start/End: Original strand, 20163585 - 20163655
Alignment:
Q  263 ttgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttag 332  Q
    ||||||||||||||| ||||| | ||||||||||||||||| ||||||||||| ||| |||||||||||||    
T  20163585 ttgtagtttttgtacatagggagccaaaattgcaagtttttgaaagttaggggtggagaagtgcactttag 20163655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 265
Target Start/End: Original strand, 32253373 - 32253458
Alignment:
Q  180 tggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattg 265  Q
    |||| |||||| ||| ||||||||||||||||||  | |||| || ||||| ||||||||| |||||||||||| |||||||||||    
T  32253373 tggcgtgccacgtagacattgaccggtcaaaatttgccaaaaggaccaaagatgcaaagggactaaatcttaggtggtcaaaattg 32253458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 218 - 332
Target Start/End: Original strand, 31660993 - 31661108
Alignment:
Q  218 aaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttag-gggg 316  Q
    |||| ||||||| |||||| | || ||||| |||||||   |||||| |||||||||||| ||  ||||||||||||||| ||||| |||||||| | ||    
T  31660993 aaaaggatcaaatttgcaatgaggttaaattttaggggactaaaattatagtttttgtacgtaaagggtcaaaattgcaaatttttgaaagttagagagg 31661092  T
Q  317 gaaaagtgcactttag 332  Q
    | ||||||||||||||    
T  31661093 ggaaagtgcactttag 31661108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 277 - 331
Target Start/End: Original strand, 46483551 - 46483605
Alignment:
Q  277 cttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 331  Q
    |||||||| |||||||| |||||||||||||||||  ||||||||||||||||||    
T  46483551 cttaggggatcaaaattacaagtttttaaaagttaaaggggaaaagtgcacttta 46483605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 254 - 315
Target Start/End: Original strand, 597304 - 597364
Alignment:
Q  254 gggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagggg 315  Q
    |||||||||||||||||||||||||||  | ||||||||| ||||||||| |||||||||||    
T  597304 gggtcaaaattgtagtttttgtactta-tgcgtcaaaatttcaagtttttgaaagttagggg 597364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 208 - 331
Target Start/End: Original strand, 43900463 - 43900585
Alignment:
Q  208 aaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaa 307  Q
    ||||||||  |||| |||||||| |||||| | | ||||| || ||||| ||||| |||||||||| || ||||||   ||||||| ||| |||||||||    
T  43900463 aaaattgatcaaaaggatcaaagatgcaaatgagataaatttttggggg-caaaactgtagtttttatatttagggaaccaaaattacaaatttttaaaa 43900561  T
Q  308 gttaggggggaaaagtgcacttta 331  Q
    |||||  | |||||||||||||||    
T  43900562 gttagaagagaaaagtgcacttta 43900585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 311
Target Start/End: Complemental strand, 43899576 - 43899470
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    |||||||||| | ||||||||||||| || ||| | ||||| | |||| | | |||||||||| ||||| || ||||  | ||||||||||||||||||     
T  43899576 gtcaaaattggccaaaaagatcaaagatgtaaatgtgctaatttttagagagccaaaattgtaatttttatatttagaagatcaaaattgcaagtttttg 43899477  T
Q  305 aaagtta 311  Q
    |||||||    
T  43899476 aaagtta 43899470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 21508407 - 21508464
Alignment:
Q  208 aaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattg 265  Q
    ||||||||| ||||||||||||| ||||||  ||||||||||||| ||| ||||||||    
T  21508407 aaaattgaccaaaaagatcaaagatgcaaattggctaaatcttagagggccaaaattg 21508464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 453 - 517
Target Start/End: Original strand, 17272799 - 17272862
Alignment:
Q  453 acacttgtgacattgtggttggcctatgtcatcgatgtcattaaccacaatgtcacccaagtatt 517  Q
    |||||||| |||||||||||||   |||||| | ||||||  |||||||||||||||||||||||    
T  17272799 acacttgtaacattgtggttggta-atgtcaccaatgtcaccaaccacaatgtcacccaagtatt 17272862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 1e-49; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 7899821 - 7899981
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||||||||| |||||| || |||||||||||||||||||||| |||||||| |||||| ||| |||||||||||||||||||  |||||||||||||     
T  7899821 acacacgtggcgtgccacgtatgcattgaccggtcaaaattgaccaaaaagattaaagttacaatggggctaaatcttagggggctaaaattgtagtttc 7899920  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    ||||||||||||  ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  7899921 tgtacttaggggaccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttag 7899981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 36449940 - 36449780
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||| ||||||||||| |||||||||||||||||||||||   |||| ||||||| |||||||||| |||| |||| ||||| |||||||||||||||    
T  36449940 acacacatggcatgccacgtaggcattgaccggtcaaaattggtcaaaaggatcaaaattgcaaagggcctaattcttgggggggcaaaattgtagtttt 36449841  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    ||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  36449840 tgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttag 36449780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 38840432 - 38840592
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||||||||| ||| | ||||||||||||||||||||||||  |||| ||| ||| |||||| |||||||||||||||||||  ||||||||||||||    
T  38840432 acacacgtggcacgccgcgtaggcattgaccggtcaaaattgatcaaaaggattaaaattgcaatggggctaaatcttagggggctaaaattgtagtttt 38840531  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    |||||||||||||  |||||||||||||||| |||||| ||||||||||||||||||||||    
T  38840532 tgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttag 38840592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 18797410 - 18797248
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||||||||| ||| || ||||||  |||||||||| | |||| || ||||| |||||||||||||||| |||||||||||||||||||||||    
T  18797410 acacacgtggcatgccaaataagcgttgaccaagtcaaaattggctaaaaggaccaaagatgcaaaggggctaaattttagggggtcaaaattgtagttt 18797311  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttagggg--ggaaaagtgcactttag 332  Q
    |  |||||| |||||||||||||||||||||| |||||||||||  |||||||||||||||||    
T  18797310 taatacttaaggggtcaaaattgcaagtttttgaaagttagggggtggaaaagtgcactttag 18797248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 177 - 331
Target Start/End: Original strand, 36450864 - 36451018
Alignment:
Q  177 acgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgta 276  Q
    |||||| ||||||| |||||||||||| |||||||||| | |||| ||||||| ||||||||| ||||| |||| ||||| | |||||||||||| ||||    
T  36450864 acgtggtatgccacgtaggcattgaccagtcaaaattggccaaaaggatcaaaattgcaaaggagctaattcttggggggccgaaattgtagtttctgta 36450963  T
Q  277 cttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 331  Q
    ||||||||  ||||||||||||||||| ||||||| |||||||||||||||||||    
T  36450964 cttaggggaccaaaattgcaagtttttgaaagttaagggggaaaagtgcacttta 36451018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 173 - 331
Target Start/End: Complemental strand, 7898853 - 7898694
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||||||||||||||| || |||||||| ||||||||||||  |||| ||| ||| |||||| ||||||||||||||||||| ||||||||||||||     
T  7898853 acacacgtggcatgccacgtaagcattgactggtcaaaattgatcaaaaggattaaaattgcaatggggctaaatcttagggggccaaaattgtagtttc 7898754  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcacttta 331  Q
    | |||||||| ||  |||||||||||||||| |||||| ||||| |||||||||||||||    
T  7898753 tatacttaggaggcaaaaattgcaagtttttgaaagttaaggggagaaaagtgcacttta 7898694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 195 - 332
Target Start/End: Complemental strand, 41878234 - 41878094
Alignment:
Q  195 gcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattg 294  Q
    |||||||||||||||||||||| |||||||| ||| |||||| |||||||||||||| |||| |||||||||||||| ||||||||||||| ||||||||    
T  41878234 gcattgaccggtcaaaattgaccaaaaagattaaaattgcaatggggctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattg 41878135  T
Q  295 ca---agtttttaaaagttaggggggaaaagtgcactttag 332  Q
    ||   ||||||| ||||||| ||||| ||||||||||||||    
T  41878134 caaatagtttttgaaagttaaggggggaaagtgcactttag 41878094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 22587893 - 22588052
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||||||||||||||||||| | ||||| |||| |||||| | |||| || ||||| |||||||||||||||||||| |||| |||||||||||||||    
T  22587893 acacacgtggcatgccacatagacgttgactggtcgaaattggccaaaaggaccaaagatgcaaaggggctaaatcttaaggggccaaaattgtagtttt 22587992  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttag 332  Q
    ||||| || |||| ||||||||||||||||| ||||||| | |||||||| ||||||||||    
T  22587993 tgtacata-ggggccaaaattgcaagtttttgaaagttatgaggggaaaaatgcactttag 22588052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 173 - 321
Target Start/End: Complemental strand, 38839404 - 38839256
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||| |||||| ||||| || |||||||| ||||||||||||| |||| ||| ||| |||||| ||||||||||||||||||| |||||||||||||||    
T  38839404 acacaagtggcacgccacgtaagcattgacgggtcaaaattgaccaaaatgattaaaattgcaatggggctaaatcttagggggccaaaattgtagtttt 38839305  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaa 321  Q
    |||| ||||||||  |||||||||||||||| ||| ||| |||||||||    
T  38839304 tgtagttagggggctaaaattgcaagtttttgaaaattaagggggaaaa 38839256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 173 - 321
Target Start/End: Original strand, 41879151 - 41879299
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||  |||| ||| ||| |||||| || ||||||| ||||||||| |||||||||||||     
T  41879151 acacacgtggcacgccacgtaggcattgactggtcaaaattgatcaaaatgattaaaattgcaatggtgctaaattttagggggttaaaattgtagttta 41879250  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaa 321  Q
    ||||||||||||| ||||||||||||||||| ||| ||| |||||||||    
T  41879251 tgtacttagggggccaaaattgcaagtttttgaaaattaagggggaaaa 41879299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 22848354 - 22848193
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||| |||||| ||||| ||||    |||||||||||  |||| || ||||| ||||||||||||||||||||||| | ||||||||||||||    
T  22848354 acacacgtggcttgccacgtaggcgttgaataagtcaaaattgatcaaaaggaccaaagctgcaaaggggctaaatcttagggagccaaaattgtagttt 22848255  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttagggggg-aaaagtgcactttag 332  Q
    ||||| |||||||  ||||||||||||||||| ||||||||||||| |||||||||||||||    
T  22848254 ttgtatttaggggaccaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttag 22848193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 802530 - 802689
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||| || |||||||| |||| |||||| | |||||||||||  ||| || ||||  ||||||||||  ||||||||| |||||||||||||||||||    
T  802530 acacacatgacatgccacctaggtattgactgctcaaaattgacctaaaggaccaaatatgcaaaggggtaaaatcttagagggtcaaaattgtagtttt 802629  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    |||||  |||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  802630 tgtacacagggggccaaaattgcaagtttttgaaacttaggggggaaaagtacactttag 802689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 204 - 332
Target Start/End: Complemental strand, 18299504 - 18299375
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||| |||| |||||||| |||||| |||||||||| ||||||| |||||||||||||||| |||||||| || |||||||| ||||||||    
T  18299504 ggtcaaaattgaccaaaaggatcaaagatgcaaaagggctaaatcatagggggccaaaattgtagtttttatacttaggtggccaaaattgaaagttttt 18299405  T
Q  304 aaaagtta-ggggggaaaagtgcactttag 332  Q
     ||||||| ||| |||||||||||||||||    
T  18299404 gaaagttacgggtggaaaagtgcactttag 18299375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 206 - 332
Target Start/End: Original strand, 18300697 - 18300821
Alignment:
Q  206 tcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaa 305  Q
    ||||||||| | |||| || ||||| ||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||| | |    
T  18300697 tcaaaattgtccaaaaggaccaaagatgcaaaggggctaaattatagggg-tcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttatga 18300795  T
Q  306 aagttaggggggaaaagtgcactttag 332  Q
    |||||| |||||||||||||| |||||    
T  18300796 aagtta-gggggaaaagtgcaatttag 18300821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 218 - 332
Target Start/End: Original strand, 23869519 - 23869633
Alignment:
Q  218 aaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagggggg 317  Q
    |||| |||||||| ||||||||||||||||||||||| |  |||||||||||||||||| |||||||| ||||||||||||||||||||  | |||| ||    
T  23869519 aaaaggatcaaagatgcaaaggggctaaatcttagggagctaaaattgtagtttttgtatttagggggccaaaattgcaagtttttaaagttaagggtgg 23869618  T
Q  318 aaaagtgcactttag 332  Q
    |||||||||||||||    
T  23869619 aaaagtgcactttag 23869633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 204 - 332
Target Start/End: Original strand, 11258781 - 11258910
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||| |||| |||||||  ||||| ||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||||||    
T  11258781 ggtcaaaattgaccaaaaggatcaaatctgcaatggggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaattgcaagttttt 11258880  T
Q  304 aaaagttag-gggggaaaagtgcactttag 332  Q
     |||||||| | ||| ||| ||||||||||    
T  11258881 gaaagttagagaggggaaaatgcactttag 11258910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 176 - 332
Target Start/End: Original strand, 13570499 - 13570656
Alignment:
Q  176 cacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgt 275  Q
    |||||||| ||||||||||| |||||||| ||||||||| |||||| ||||||||||| |||||| |||| |||| ||||  ||||||| ||||||||||    
T  13570499 cacgtggcgtgccacataggaattgaccgctcaaaattggcaaaaaggatcaaagttgtaaagggactaattcttgggggaccaaaattatagtttttgt 13570598  T
Q  276 acttagggggtcaaaattgcaagtttttaaaagtta-ggggggaaaagtgcactttag 332  Q
    ||||| |||   |||||||||||||||| ||||||| |||  ||||| ||||||||||    
T  13570599 acttaagggactaaaattgcaagtttttgaaagttatgggtagaaaaatgcactttag 13570656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 173 - 314
Target Start/End: Complemental strand, 22587662 - 22587522
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||||||||||||||  ||||||||||| ||||||||||| | |||| || ||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  22587662 acacacgtggcatgccatgtaggcattgactggtcaaaattggccaaaaggaccaaagatgcaaagaggctaaatcttagggggccaaaattgtagtttt 22587563  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttaggg 314  Q
    ||||  ||||||  |||||||| || ||||| ||||||||||    
T  22587562 tgta-ataggggaccaaaattggaactttttgaaagttaggg 22587522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 205 - 332
Target Start/End: Original strand, 18905959 - 18906086
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    |||||||||||  ||||||| ||||| |||||| | ||||||||||||||| | |||||||||||||||||||||||||||  ||||||||||||||||     
T  18905959 gtcaaaattgatcaaaaagaccaaagatgcaaatgagctaaatcttaggggct-aaaattgtagtttttgtacttagggggctaaaattgcaagtttttg 18906057  T
Q  305 aaagttag-gggggaaaagtgcactttag 332  Q
    ||||||||  |||||||||||||||||||    
T  18906058 aaagttagaaggggaaaagtgcactttag 18906086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 11257784 - 11257624
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||||||||||  |||| |||||   |||||||||||  |||| ||||||| |||||| |||||||||||||||| || ||||||||||||||    
T  11257784 acacacgtggcatgccacgcaggcgttgactatgtcaaaattgatcaaaaggatcaaatttgcaatggggctaaatcttaggaggccaaaattgtagttt 11257685  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttag 332  Q
    || |||||| ||| | |||||||||||||||| |||||||| || | |||||||||||||||    
T  11257684 ttatactta-gggtttaaaattgcaagtttttgaaagttagaggagtaaaagtgcactttag 11257624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 173 - 309
Target Start/End: Original strand, 26545459 - 26545596
Alignment:
Q  173 acacacgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||||||||||||| || ||||   ||||||||||||  |||| || ||||| ||||||||||||||||||||| ||||||||||| || |||    
T  26545459 acacacgtggcatgccacatatgcgttgatttggtcaaaattgatcaaaatgaccaaagatgcaaaggggctaaatcttagagggtcaaaattataattt 26545558  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagt 309  Q
    ||||| ||| |||||||||||||||| ||||| |||||    
T  26545559 ttgtatttaaggggtcaaaattgcaaatttttgaaagt 26545596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 205 - 332
Target Start/End: Original strand, 11938760 - 11938887
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    |||||||||| |||||| ||||||| ||||||| | ||||| |||||||||| ||||||| || |||||||||||||| |  |||||||||||||||||     
T  11938760 gtcaaaattggcaaaaatgatcaaaattgcaaaagagctaattcttaggggggcaaaattata-tttttgtacttaggagaccaaaattgcaagtttttg 11938858  T
Q  305 aaagttagggg-ggaaaagtgcactttag 332  Q
    ||||||||||| |||||||||||||||||    
T  11938859 aaagttaggggtggaaaagtgcactttag 11938887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 205 - 332
Target Start/End: Complemental strand, 13030419 - 13030294
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    |||||||||||| |||| || ||||| |||||| | ||||||||||||||||  ||||||||| |||||||||||| |||| ||||||| |||||||||     
T  13030419 gtcaaaattgaccaaaatgaccaaagatgcaaaagagctaaatcttagggggcaaaaattgtaatttttgtactta-ggggccaaaattacaagtttttg 13030321  T
Q  305 aaagttaggggggaaaagtgcactttag 332  Q
    ||||||| ||||||||||||||||||||    
T  13030320 aaagtta-gggggaaaagtgcactttag 13030294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 208 - 332
Target Start/End: Complemental strand, 18904494 - 18904369
Alignment:
Q  208 aaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaa 307  Q
    ||||||| | |||| || ||||| || ||||||||||| ||||||||   ||||||||||||||||||||||| |||| |||||||||| |||||| |||    
T  18904494 aaaattggccaaaaggaccaaagatgtaaaggggctaattcttagggaaccaaaattgtagtttttgtacttaaggggccaaaattgcacgtttttgaaa 18904395  T
Q  308 gtt-aggggggaaaagtgcactttag 332  Q
    ||| ||||||||||||||||||||||    
T  18904394 gttaaggggggaaaagtgcactttag 18904369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 173 - 331
Target Start/End: Complemental strand, 28618084 - 28617926
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||  |||||| ||||||||||    |||||||| ||| ||||  | ||||| ||||||||||||||||||||||||| |||||||| |||||    
T  28618084 acacacgtggtctgccacgtaggcattgaattagtcaaaatagaccaaaataaccaaagatgcaaaggggctaaatcttaggggg-caaaattgaagttt 28617986  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 331  Q
    |||||||| ||||| |||||||||||| |||| |||||||||| | |||| || ||||||    
T  28617985 ttgtacttggggggccaaaattgcaagattttgaaagttagggagaaaaaatgtacttta 28617926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 231 - 331
Target Start/End: Original strand, 8535653 - 8535752
Alignment:
Q  231 ttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcacttt 330  Q
    ||||||||||||||| ||||||||||||||||||||||||| | ||||||  || |||||||| ||||||||||||||||| || ||||||||| |||||    
T  8535653 ttgcaaaggggctaattcttagggggtcaaaattgtagtttctctacttaaaggatcaaaattacaagtttttaaaagtta-ggaggaaaagtgtacttt 8535751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 204 - 332
Target Start/End: Complemental strand, 24475355 - 24475227
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||| |||| || ||||| |||||| | |||||||  ||||||| |||||||||||||||| |||||||||||  |||||| |||||||||    
T  24475355 ggtcaaaattgaccaaaaggaccaaagatgcaaatgagctaaattatagggggccaaaattgtagtttttatacttagggggcaaaaattacaagttttt 24475256  T
Q  304 aaaagttaggggggaaaagtgcactttag 332  Q
     ||||||||||| |  ||| |||||||||    
T  24475255 gaaagttaggggagggaagcgcactttag 24475227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 173 - 303
Target Start/End: Original strand, 810720 - 810850
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||| || |||||||| |||| |||||| | ||||||||||   ||| || ||||  ||||||||||  ||||||||| |||||||||||||||||||    
T  810720 acacacatgacatgccacctaggtattgactgctcaaaattgatctaaaggaccaaatatgcaaaggggtaaaatcttagagggtcaaaattgtagtttt 810819  T
Q  273 tgtacttagggggtcaaaattgcaagttttt 303  Q
    |||||  |||||| |||||||||||||||||    
T  810820 tgtacacagggggccaaaattgcaagttttt 810850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 226 - 332
Target Start/End: Complemental strand, 1033318 - 1033213
Alignment:
Q  226 caaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgc 325  Q
    ||||||||||| ||||||||||||||| |||   ||||| || |||| ||| |||||||  ||||||||||||||||||||||||||||||||||||| |    
T  1033318 caaagttgcaatggggctaaatcttagaggggttaaattataattttggtatttaggggc-caaaattgcaagtttttaaaagttaggggggaaaagtac 1033220  T
Q  326 actttag 332  Q
    |||||||    
T  1033219 actttag 1033213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 240 - 332
Target Start/End: Original strand, 1034475 - 1034568
Alignment:
Q  240 ggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    ||||||||||||||||| | ||||||| ||||| |||| ||||||| |||||||||| |||||| |||||| ||||||||||||||||||||||    
T  1034475 ggctaaatcttaggggggctaaattgtggttttggtacgtagggggccaaaattgcatgtttttgaaagttaaggggggaaaagtgcactttag 1034568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 173 - 331
Target Start/End: Complemental strand, 13568133 - 13567975
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||| ||||| |||||| ||||||| ||||||||||||  ||| ||  |   ||||||||||||||| | ||  ||| |||||||||||||||    
T  13568133 acacacgtggcctgccatataggcgttgaccgagtcaaaattgacctaaatgactactattgcaaaggggctaattttt--gggatcaaaattgtagttt 13568036  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttag-gggggaaaagtgcacttta 331  Q
    ||||| |||||||| ||||||||||||||||| ||| ||||  |||||||||| |||||||    
T  13568035 ttgtatttagggggccaaaattgcaagtttttgaaacttagaaggggaaaagtacacttta 13567975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 173 - 321
Target Start/End: Original strand, 18869100 - 18869251
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccg-gtcaaaattgacaaaaaagatcaaagttgcaaag-gggctaaatcttagggggtcaaaattgtagtt 270  Q
    ||||||||||| |||||||||||| ||||    |||||||||||  ||||||| ||||| ||||||  ||||||||||||||||| | ||||||||||||    
T  18869100 acacacgtggcctgccacataggcgttgaataagtcaaaattgatcaaaaagaccaaagatgcaaaatgggctaaatcttaggggataaaaattgtagtt 18869199  T
Q  271 tttgtacttagggggtcaaaattg-caagtttttaaaagttaggggggaaaa 321  Q
    |||||||||||  || |||||||| ||| ||||| |||||||| || |||||    
T  18869200 tttgtacttagaaggccaaaattgccaaatttttgaaagttagaggtgaaaa 18869251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 24476863 - 24476937
Alignment:
Q  253 ggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcact 328  Q
    ||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||| ||||| |||||||||||    
T  24476863 ggggtcaaaattgtagtttttgtacttaggggaccaaaattacaagtttttaaaagtt-gggggaaaaagtgcact 24476937  T

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Target: chr2; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 181 - 332
Target Start/End: Original strand, 1093093 - 1093244
Alignment:
Q  181 ggcatgccacataggcattgac-cggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtactt 279  Q
    |||||||||||||||  ||||| | |||||||||| |||||  |||||   |||||||||||||||||||||| |||| ||||||||| ||||||||  |    
T  1093093 ggcatgccacataggggttgactcagtcaaaattgccaaaag-gatcactattgcaaaggggctaaatcttagcgggttaaaattgtaatttttgtatat 1093191  T
Q  280 agggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    ||||  ||| ||||||||  |||||||||||| ||||| ||| | ||||||||    
T  1093192 agggaatcacaattgcaacattttaaaagttaaggggggaaaatacactttag 1093244  T

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Target: chr2; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 257 - 332
Target Start/End: Complemental strand, 18869002 - 18868926
Alignment:
Q  257 tcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttag 332  Q
    |||||||||||||||||||| ||||| || ||||||||||||||||| ||||||||||| |||||||| ||||||||    
T  18869002 tcaaaattgtagtttttgtatttaggaggccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttag 18868926  T

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Target: chr2; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 173 - 331
Target Start/End: Complemental strand, 26544311 - 26544152
Alignment:
Q  173 acacacgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||| ||||||||||||| || |||||  ||||||||||||  |||| || ||||  |||||||| ||||||||||||| ||  |||| ||||||||    
T  26544311 acacacgcggcatgccacatatgcgttgacttggtcaaaattgatcaaaaggaccaaatatgcaaaggtgctaaatcttaggaggctaaaactgtagttt 26544212  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttagggg-ggaaaagtgcacttta 331  Q
    ||||||||| ||   |||||||| || ||||||||| |||||||  |||||||||||||||    
T  26544211 ttgtactta-ggaaccaaaattgtaaatttttaaaaattaggggtagaaaagtgcacttta 26544152  T

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Target: chr2; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 204 - 303
Target Start/End: Complemental strand, 11996838 - 11996739
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||| |||| || ||||| || ||||||| |||||||||| |    ||||||||||||||||||| |||||||||||||| |||| |||||    
T  11996838 ggtcaaaattgaccaaaaggaccaaagatgtaaaggggttaaatcttagagaactaaaattgtagtttttgtacatagggggtcaaaatcgcaacttttt 11996739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 252 - 315
Target Start/End: Complemental strand, 32739706 - 32739643
Alignment:
Q  252 gggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttagggg 315  Q
    ||||| |||||||||||||||||||| || |||| ||||||||||||||||| |||||||||||    
T  32739706 gggggccaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaagttagggg 32739643  T

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Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 231 - 332
Target Start/End: Complemental strand, 16446258 - 16446156
Alignment:
Q  231 ttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactt 329  Q
    ||||||| ||| ||| |||| |||  |||||||||||||||||||| ||| | ||| |||||||||||||||| |||||| ||||  ||||| |||||||    
T  16446258 ttgcaaatgggttaattcttggggtatcaaaattgtagtttttgtatttatgaggttaaaattgcaagtttttgaaagttaagggtagaaaaatgcactt 16446159  T
Q  330 tag 332  Q
    |||    
T  16446158 tag 16446156  T

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Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 231 - 331
Target Start/End: Complemental strand, 8534685 - 8534586
Alignment:
Q  231 ttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcacttt 330  Q
    |||||||| |||||| |||| ||||  |||||||||||||| | ||||||  || ||||||||| |||||||| ||| ||| |||||||||| |||||||    
T  8534685 ttgcaaagaggctaattctt-ggggaccaaaattgtagtttctatacttaaaggatcaaaattgtaagtttttgaaaattaagggggaaaagagcacttt 8534587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 331
Target Start/End: Complemental strand, 13830322 - 13830270
Alignment:
Q  279 tagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcacttta 331  Q
    |||||||||||||| |||| ||||| ||| |||||||||||||||||||||||    
T  13830322 tagggggtcaaaatcgcaactttttcaaacttaggggggaaaagtgcacttta 13830270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 256
Target Start/End: Original strand, 27553708 - 27553787
Alignment:
Q  177 acgtggcatgccacataggcattgac-cggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttaggggg 256  Q
    |||||||||||||| ||||| ||||| |||||||||||||| |||| | || |  ||||||||||||||||||||||||||    
T  27553708 acgtggcatgccacttaggcgttgactcggtcaaaattgaccaaaagg-tcgatattgcaaaggggctaaatcttaggggg 27553787  T

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Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 514
Target Start/End: Complemental strand, 39819116 - 39819060
Alignment:
Q  458 tgtgacattgtggttggcctatgtcatcgatgtcattaaccacaatgtcacccaagt 514  Q
    ||||||||||||||||||| |||||| | ||||||  ||||||||||||||||||||    
T  39819116 tgtgacattgtggttggccaatgtcaccaatgtcaccaaccacaatgtcacccaagt 39819060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 458 - 509
Target Start/End: Complemental strand, 12918586 - 12918535
Alignment:
Q  458 tgtgacattgtggttggcctatgtcatcgatgtcattaaccacaatgtcacc 509  Q
    ||||||||||||||||||| |||||| | ||||||| |||||||||||||||    
T  12918586 tgtgacattgtggttggccaatgtcaccaatgtcatcaaccacaatgtcacc 12918535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 21837298 - 21837352
Alignment:
Q  277 cttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    ||||||||| ||||||||||||||||| ||||||| |||| |||||||||||||||    
T  21837298 cttagggggccaaaattgcaagtttttgaaagtta-ggggaaaaagtgcactttag 21837352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 275
Target Start/End: Complemental strand, 1410130 - 1410060
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgt 275  Q
    |||||| |||||||||| ||| |||||||||||  ||||||||||||||||  |||||||||  |||||||    
T  1410130 gtcaaagttgacaaaaaggattaaagttgcaaataggctaaatcttaggggaccaaaattgtcatttttgt 1410060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 275
Target Start/End: Original strand, 22067753 - 22067823
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgt 275  Q
    |||||||||||| |||| |||||||||||| ||| || |||||  |||||||  |||||||||||||||||    
T  22067753 gtcaaaattgaccaaaaggatcaaagttgcgaagagggtaaattatagggggctaaaattgtagtttttgt 22067823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 206 - 294
Target Start/End: Complemental strand, 1091824 - 1091736
Alignment:
Q  206 tcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattg 294  Q
    |||||||||||||||| || ||   |||||||  |||||||||||| |||||||||||||||| |||| ||| ||| ||  ||||||||    
T  1091824 tcaaaattgacaaaaatgaccactattgcaaataggctaaatcttaaggggtcaaaattgtagcttttatacatagaggaccaaaattg 1091736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 192 - 276
Target Start/End: Complemental strand, 32739794 - 32739710
Alignment:
Q  192 taggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgta 276  Q
    ||||| ||||||||||||||||| | |||  || ||||| || |||  | |||||||||| |||| |||||||||||||||||||    
T  32739794 taggcgttgaccggtcaaaattggccaaatggaccaaagatggaaaatgactaaatcttaaggggccaaaattgtagtttttgta 32739710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 483
Target Start/End: Complemental strand, 18182569 - 18182530
Alignment:
Q  444 ttttttgttacacttgtgacattgtggttggcctatgtca 483  Q
    ||||||| ||||||||||||||||||||||||| ||||||    
T  18182569 ttttttggtacacttgtgacattgtggttggccaatgtca 18182530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 100; Significance: 4e-49; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 3247 - 3406
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||| ||||||||| || |||||||||||| || ||||||| |||||| |||||||||||||||||||||||||||||||||  ||||||| |||||||    
T  3247 acacatgtggcatgctacgtaggcattgaccagtaaaaattggcaaaaaggatcaaagttgcaaaggggctaaatcttaggggaccaaaattatagtttt 3346  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    ||||| || ||||||||||||| |||||||| ||||| ||||||||||||||||||||||    
T  3347 tgtacctatggggtcaaaattgtaagtttttgaaagtaaggggggaaaagtgcactttag 3406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 94; Significance: 2e-45; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 204 - 332
Target Start/End: Complemental strand, 60221 - 60092
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||| ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  60221 ggtcaaaattgaccaaaaagaccaaagatgcaaaggggctaaatcatagggggtcaaaattgtagtttttatacatagggggtcaaaattgcaagttttt 60122  T
Q  304 aaaagttag-gggggaaaagtgcactttag 332  Q
    ||||||||| || |||||||||||||||||    
T  60121 aaaagttagaggaggaaaagtgcactttag 60092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 204 - 332
Target Start/End: Original strand, 61429 - 61558
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||| |||| || ||||| |||||| |||||||||| ||||||| ||||||| ||||||||||||||||||||  ||||||||||||||||    
T  61429 ggtcaaaattgaccaaaaggaccaaagatgcaaaagggctaaatcatagggggccaaaattatagtttttgtacttagggggctaaaattgcaagttttt 61528  T
Q  304 -aaaagttaggggggaaaagtgcactttag 332  Q
     |||| | |||| |||||||||||||||||    
T  61529 gaaaattaagggaggaaaagtgcactttag 61558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 89; Significance: 1e-42; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 395 - 235
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||||||||||||||||||||| |||||||||||||||||  ||||| |||||||  |||||||||||||| |||||||||  ||||||| |||||||    
T  395 acacacgtggcatgccacataggcgttgaccggtcaaaattgggaaaaaggatcaaatatgcaaaggggctaattcttaggggaccaaaattatagtttt 296  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    ||||| ||||||  ||||||||||| ||||| |||||| ||||||| ||||||||||||||    
T  295 tgtacataggggaccaaaattgcaactttttgaaagttaagggggggaaagtgcactttag 235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 173 - 311
Target Start/End: Original strand, 917 - 1055
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||||||||||||||| || || |||||||||||||||||  ||||| || ||||  |||||||||||||| |||| ||||| ||||||| |||||||    
T  917 acacacgtggcatgccacgtaagcgttgaccggtcaaaattgggaaaaaggaccaaatatgcaaaggggctaattcttggggggccaaaattatagtttt 1016  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagtta 311  Q
    ||||| || |||  ||||||||||| |||||||||||||    
T  1017 tgtacataagggaccaaaattgcaactttttaaaagtta 1055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 86; Significance: 9e-41; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 1602 - 1441
Alignment:
Q  173 acacacgtggcatgccacataggcattgacc-ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||| ||||||||||| ||  ||||||||  ||||||||||||| |||| || ||||| |||||| |||||||||||||||||||||||||| ||||||    
T  1602 acacatgtggcatgccaaatcagcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttagggggtcaaaattatagttt 1503  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagttag-gggggaaaagtgcactttag 332  Q
    || ||| ||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  1502 ttatacatagggggtcaaaattgcaagttttttaaagttagagggggaaaagtacactttag 1441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 80; Significance: 3e-37; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 173 - 332
Target Start/End: Original strand, 4669 - 4828
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||| || |||| ||| |||||||||| ||||||||||||   |||| ||| |||||||||| |||||||||  |||| ||||||||||||||||||     
T  4669 acacacatgacatgtcacgtaggcattgatcggtcaaaattggtcaaaaggattaaagttgcaatggggctaaaatttagagggtcaaaattgtagtttc 4768  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    |||| |||||||| |||||||||| ||||||||||||||||| || ||||||||||||||    
T  4769 tgtatttagggggccaaaattgcatgtttttaaaagttagggagggaaagtgcactttag 4828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 173 - 315
Target Start/End: Complemental strand, 3837 - 3695
Alignment:
Q  173 acacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    ||||||||||| |||||| |||||||||||| |||||||||||| |||||||| |||||||||| | ||||||||||||||||   |||||| ||||||     
T  3837 acacacgtggcgtgccacgtaggcattgaccagtcaaaattgaccaaaaagattaaagttgcaatgcggctaaatcttaggggactaaaattatagtttc 3738  T
Q  273 tgtacttagggggtcaaaattgcaagtttttaaaagttagggg 315  Q
    | |||| |||||| ||||||||||||||||| |||||||||||    
T  3737 tttactcagggggccaaaattgcaagtttttgaaagttagggg 3695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 78; Significance: 5e-36; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 204 - 332
Target Start/End: Original strand, 5408 - 5537
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    |||||||||| || |||| ||||||| ||| || |||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  5408 ggtcaaaattaaccaaaaggatcaaatttgtaatggggctaaatcttaagggggcaaaattgtagtttttgtacttaaggggtcaaaattgcaagttttt 5507  T
Q  304 aaaagtta-ggggggaaaagtgcactttag 332  Q
     ||| ||| |||||||||||||||||||||    
T  5508 gaaaattagggggggaaaagtgcactttag 5537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 204 - 332
Target Start/End: Complemental strand, 4573 - 4444
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||| ||| |||| || |||| ||| || |||||||||| ||||||||  ||||||||| |||||||||||| ||||  ||||||| ||||||||    
T  4573 ggtcaaaatcgaccaaaatgaccaaatttgtaatggggctaaattttaggggggtaaaattgtaatttttgtacttaaggggctaaaattgtaagttttt 4474  T
Q  304 aaaagttaggggggaaaa-gtgcactttag 332  Q
     ||| ||||||||||||| |||||||||||    
T  4473 gaaaattaggggggaaaatgtgcactttag 4444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 205 - 332
Target Start/End: Complemental strand, 19618 - 19490
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaa-gttttt 303  Q
    |||||||||||| |||| |||||||| |||||||||| ||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| |||||     
T  19618 gtcaaaattgaccaaaatgatcaaagatgcaaaggggttaaatcttaggggatcaaaattgtagtttttatacttagggggccaaaattgcaaggttttg 19519  T
Q  304 aaaagttaggggggaaaagtgcactttag 332  Q
    |||| | ||||||||||| ||||||||||    
T  19518 aaaattaaggggggaaaaatgcactttag 19490  T

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Target: scaffold0049 (Bit Score: 73; Significance: 5e-33; HSPs: 3)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 213 - 332
Target Start/End: Original strand, 7394 - 7514
Alignment:
Q  213 tgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttag 312  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| | || ||||| ||| ||||    
T  7394 tgactaaaaggatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttctgtacatagggggtcaaaatcgtaactttttcaaacttag 7493  T
Q  313 -gggggaaaagtgcactttag 332  Q
     |||||| |||||||||||||    
T  7494 agggggacaagtgcactttag 7514  T

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Target: scaffold0049; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 217 - 332
Target Start/End: Complemental strand, 7655 - 7540
Alignment:
Q  217 aaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggg 316  Q
    |||||| ||| |||||| |||| ||||||||| ||||| |  ||||||||||||||||| | |||||||||||| || ||| ||||| ||| |||  |||    
T  7655 aaaaaaaatcgaagttgtaaagaggctaaatcgtagggagctaaaattgtagtttttgttcatagggggtcaaatttacaactttttcaaacttataggg 7556  T
Q  317 gaaaagtgcactttag 332  Q
    | ||||||||||||||    
T  7555 ggaaagtgcactttag 7540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 205 - 272
Target Start/End: Original strand, 7890 - 7957
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttt 272  Q
    |||||||||| | |||| |||||||||||||||||||||||||| |||||||| |||||| |||||||    
T  7890 gtcaaaattggccaaaaggatcaaagttgcaaaggggctaaatcatagggggttaaaattctagtttt 7957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 175 - 332
Target Start/End: Complemental strand, 23239 - 23083
Alignment:
Q  175 acacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttg 274  Q
    ||||||||| |  ||||||||| |||||| |||||||||||  |||| ||| ||| |||||| ||||||||| ||||||||  ||| ||||| ||||| |    
T  23239 acacgtggcgtatcacataggctttgaccagtcaaaattgagcaaaatgataaaatttgcaatggggctaaagcttaggggagcaagattgttgttttgg 23140  T
Q  275 tacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    ||||||| ||| ||||||||||||||||| |||||||| |||||||||||||||||||    
T  23139 tacttagagggacaaaattgcaagtttttgaaagttag-ggggaaaagtgcactttag 23083  T

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Target: scaffold0186; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 203 - 332
Target Start/End: Original strand, 23858 - 23989
Alignment:
Q  203 cggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaa-ttgtagtttttgtacttagggggtcaaaattgcaagttt 301  Q
    |||||||||||||  |||| ||| ||| |||||| ||||||||||| ||  |||  |||| |||| |||||  || |||||| | |||||||||||||||    
T  23858 cggtcaaaattgatcaaaaggataaaatttgcaatggggctaaatcctatagggggaaaagttgttgttttgatatttagggagccaaaattgcaagttt 23957  T
Q  302 ttaaaagttaggg-gggaaaagtgcactttag 332  Q
    || |||||||||| |  |||||||||||||||    
T  23958 ttgaaagttagggagaaaaaagtgcactttag 23989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 204 - 332
Target Start/End: Complemental strand, 37278 - 37150
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgc-aagtttt 302  Q
    ||||||||||||| |||| ||| ||| || ||| ||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||| || ||||    
T  37278 ggtcaaaattgaccaaaatgatgaaattttcaatggggctaaatcgtagggggccaaaattgttgtttttgtacttagggggtcaaaattgcaaattttt 37179  T
Q  303 taaaagttaggggggaaaagtgcactttag 332  Q
    |||||| || ||||||||||||||||||||    
T  37178 taaaagata-gggggaaaagtgcactttag 37150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 204 - 332
Target Start/End: Original strand, 49403 - 49532
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||| | |||| || |||||||||||||| ||||||||||||||||||||||||||||||||| |   ||||||| ||||||||||| |||||    
T  49403 ggtcaaaattggccaaaaggaccaaagttgcaaaggagctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttt 49502  T
Q  304 aaaagtt-aggggggaaaagtgcactttag 332  Q
     |||||| ||||| ||||||||||||||||    
T  49503 taaagttaaggggagaaaagtgcactttag 49532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 66; Significance: 8e-29; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 204 - 332
Target Start/End: Original strand, 2435 - 2563
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaag-tttt 302  Q
    ||||||||||||| |||| ||| ||| |||||| |  |||||||| ||||||| |||||| || ||||||||||||||||||||||||||||||| ||||    
T  2435 ggtcaaaattgaccaaaaggatgaaatttgcaatgtagctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttt 2534  T
Q  303 taaaagttaggggggaaaagtgcactttag 332  Q
    | ||||||| ||||||||||||||||||||    
T  2535 tgaaagtta-gggggaaaagtgcactttag 2563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 204 - 332
Target Start/End: Original strand, 7058 - 7186
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaag-tttt 302  Q
    ||||||||||||| |||| ||| ||| |||||| |  |||||||| ||||||| |||||| || ||||||||||||||||||||||||||||||| ||||    
T  7058 ggtcaaaattgaccaaaaggatgaaatttgcaatgtagctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttt 7157  T
Q  303 taaaagttaggggggaaaagtgcactttag 332  Q
    | ||||||| ||||||||||||||||||||    
T  7158 tgaaagtta-gggggaaaagtgcactttag 7186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 173 - 332
Target Start/End: Complemental strand, 18891 - 18730
Alignment:
Q  173 acacacgtggcatgccacataggcattgac-cggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagttt 271  Q
    ||||||||||||||||| ||  || ||||| ||| ||||||||  ||||| || ||   ||| ||||||| ||| ||||||| |||||||||||||||||    
T  18891 acacacgtggcatgccaaatcagcgttgactcggccaaaattgctaaaaaggaccactattgtaaaggggttaattcttaggaggtcaaaattgtagttt 18792  T
Q  272 ttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    |||| | |||| ||||||||| |||| |||||||||||| || ||| |||||||||||||||    
T  18791 ttgttcataggaggtcaaaatcgcaactttttaaaagttaagagggaaaaagtgcactttag 18730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 51; Significance: 7e-20; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 226 - 331
Target Start/End: Complemental strand, 6452 - 6346
Alignment:
Q  226 caaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtg 324  Q
    ||||| ||||||  |||||||||||||||||||||||||||||||||||||| |||||||  ||||| | || ||||| ||| || |||| |||||||||    
T  6452 caaagatgcaaaaaggctaaatcttagggggtcaaaattgtagtttttgtacatagggggctaaaatcgtaactttttgaaacttaagggcggaaaagtg 6353  T
Q  325 cacttta 331  Q
    |||||||    
T  6352 cacttta 6346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 205 - 332
Target Start/End: Original strand, 8998 - 9124
Alignment:
Q  205 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 304  Q
    ||||||||||   |||| |||||||| ||||   |||||||||||||||||  |||||||||||||||||||| |||| ||  |||||  ||| |||||     
T  8998 gtcaaaattggtcaaaaggatcaaagatgcatgagggctaaatcttaggggc-caaaattgtagtttttgtacataggaggcaaaaatcacaactttttg 9096  T
Q  305 aaagttaggggggaaaagtgcactttag 332  Q
    ||| | ||| || |||||||||||||||    
T  9097 aaattaaggaggaaaaagtgcactttag 9124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 259 - 332
Target Start/End: Original strand, 49109 - 49183
Alignment:
Q  259 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 332  Q
    ||||||||||||||  |||||||| || |||||||||||||||||||||||| |||| ||||||||||| |||||    
T  49109 aaaattgtagttttaatacttaggaggccaaaattgcaagtttttaaaagttaagggtggaaaagtgcaatttag 49183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 204 - 303
Target Start/End: Complemental strand, 48437 - 48341
Alignment:
Q  204 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 303  Q
    ||||||||||||| |||  || ||||| |||||||||  |||||||||||||  ||||||| |||||||||||| || |||||| |||||||||||||||    
T  48437 ggtcaaaattgaccaaag-gaccaaagatgcaaagggaataaatcttaggggaccaaaattatagtttttgtacata-ggggtc-aaattgcaagttttt 48341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 243 - 332
Target Start/End: Complemental strand, 13283 - 13195
Alignment:
Q  243 taaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaagtgcactttag 332  Q
    |||||||||||||   |||||||||||||| |||| |||| |||||||||  ||| ||||| |||||||| |||||||||||||||||||    
T  13283 taaatcttaggggacaaaaattgtagttttcgtacataggaggtcaaaatcacaactttttcaaagttag-ggggaaaagtgcactttag 13195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 232 - 332
Target Start/End: Original strand, 117 - 218
Alignment:
Q  232 tgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta-ggggggaaaagtgcacttt 330  Q
    ||||| ||||||||| | ||||||| ||||||||| |||||  ||| | ||||| |||||| ||||  |||| ||||||| |||||||||||||||||||    
T  117 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcacttt 216  T
Q  331 ag 332  Q
    ||    
T  217 ag 218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 278 - 316
Target Start/End: Original strand, 15702 - 15740
Alignment:
Q  278 ttagggggtcaaaattgcaagtttttaaaagttaggggg 316  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  15702 ttagggggtcaaaattgcaactttttaaaagttaagggg 15740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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