View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2813-Insertion-13 (Length: 582)
Name: NF2813-Insertion-13
Description: NF2813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2813-Insertion-13 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 429; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 429; E-Value: 0
Query Start/End: Original strand, 8 - 582
Target Start/End: Complemental strand, 3304791 - 3304242
Alignment:
| Q |
8 |
gattgcacaatacaacacgtatatgcttttattcattatctactaatggaaagtgaaacacgaaattatgtattggtacgattagttttggatcaagtta |
107 |
Q |
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| T |
3304791 |
gattgcacaatacaacatatatatgcttttattcattatctactaatggaaagtgaaacacgaaattatgtattggtacgattagttttggatcaagtta |
3304692 |
T |
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| Q |
108 |
tctaacatcgaggataaactttatctgatgtcgcatctattgatgaaaagtgaacacatgaatcataaaaaccttgtatgcatgtctacaatacttaaat |
207 |
Q |
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| T |
3304691 |
cctaacatcgaggataaactttatccgatgtcgcatctattgatgaaaagtgaacacatgaatcataaaaaccttgtatg----tctacaatacttaaat |
3304596 |
T |
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| Q |
208 |
aacatagaggaacacatcatcaggatgattcaccatcatctcgtgacaacaagtgaagcatgattgttattggtaattaattagaaccttctacgtttgg |
307 |
Q |
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| T |
3304595 |
aacacaaaggaaaacatcatgaggatgattcaccatcatctcgtgacaacaagtgaagcatgattgttattggtaattaattagaaccttctacatttgg |
3304496 |
T |
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| Q |
308 |
aacgaagattcgaggcatcatctactcaaaagctcgaatacttcctgtgatcaagtatgagtccaagtgccaagatccaaaagaagacttttgaacatct |
407 |
Q |
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| T |
3304495 |
aacgaagattcaaggcatcatctactcaaaagctggaatacttcttgtgatcaagtatgagtccaagtgccaagat-------------------catct |
3304415 |
T |
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| Q |
408 |
caagactttgtacttacaacctagaaagtagccagaaaccaaactatccctctaaagagaatattctaagacatatctacaagcaacgactctttttcta |
507 |
Q |
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| T |
3304414 |
caagattttgtacttacaacctagaaagtagccagaaaccaaactatccctctaaagagaatattctaagac--atctacaagcaacgactctttttcta |
3304317 |
T |
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| Q |
508 |
caccatggcaacaactcttttacatagcgagatttcgacaattatatgctctcaactggtctttctcataaaagg |
582 |
Q |
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| T |
3304316 |
caccatggcaacaactcttttacatagctagatttcgacaattatatgctctcaactggtctttctcataaaagg |
3304242 |
T |
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