View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2813-Insertion-14 (Length: 455)
Name: NF2813-Insertion-14
Description: NF2813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2813-Insertion-14 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 376; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 376; E-Value: 0
Query Start/End: Original strand, 24 - 455
Target Start/End: Original strand, 37742348 - 37742786
Alignment:
| Q |
24 |
aacttgaacaaatcgtggcatgttttatcaacgcattttttcggtacaaatttattcttgtccaaaaataaaatgaaattgagaattggcacggtagata |
123 |
Q |
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| T |
37742348 |
aacttgaacaaatcgtggcatgttttatcaatgcattttttcggtacaaatttatttttgtctaaaaataaaatgaaattgagaattgacacggtagata |
37742447 |
T |
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| Q |
124 |
atttacttataaaattgagaaggaaattaattagatgaaatgattcaatcgaagaaaaatgaaaagtagctcttctccgacacaacctcaaattgcacct |
223 |
Q |
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| T |
37742448 |
atttacttataaaattgagaaggaaattaattagatgaaatgattcaatcgaagaaaaatgaaaagtagctcttctccgacacaacctcaaattacacct |
37742547 |
T |
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| Q |
224 |
aatgatcacatgtgggtagttatgatttatgatttattatgagaaggattaaatttcagtctcttgttgattatggtggcggtgctattgaattgactaa |
323 |
Q |
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| T |
37742548 |
aatgatcacatgtgggtagttatgatttatgatttattatgagaaggattaaatttcagtctcttgttgattatggtggcggtgctattgaattgactaa |
37742647 |
T |
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| Q |
324 |
cgatgacaag-aaagaaacatagtcctttcctatgaattatagatacacgcaaatgttaga------tattagtatagtagtagcaaaatccgtattcgt |
416 |
Q |
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| T |
37742648 |
cgatgacaagaaaagaaacatagtcctttcctatgaattatagatacacgcaaatgttagatattagtattagtatagtagtagcaaaatccgtattcgt |
37742747 |
T |
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| Q |
417 |
ggatatccgctgaacccaattcgatttgacgcgtttgga |
455 |
Q |
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| T |
37742748 |
ggatacccgttgaacccaatttgatttgacgcgtttgga |
37742786 |
T |
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