View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2813-Insertion-5 (Length: 840)
Name: NF2813-Insertion-5
Description: NF2813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2813-Insertion-5 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 412; Significance: 0; HSPs: 18)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 412; E-Value: 0
Query Start/End: Original strand, 20 - 632
Target Start/End: Original strand, 11049718 - 11050334
Alignment:
| Q |
20 |
acaagcttttgaggtgacatatttcttgtggaatatctctttct-------aagttgttataagcaaatgaaaaatcggttaagcttgaaagattcccta |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
11049718 |
acaagcttttgaggtgacatatttcttgtggaatatctccttctaagttctaagttgttatacacaaatgaaaaatcggttaagcttgaaagattcccta |
11049817 |
T |
|
| Q |
113 |
tgaatgaagggattcctccggttaatttatttttccaaatgggcaatgattgaagttttttcaacgaggcaatttcaattggtatttttccatttaaatt |
212 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||| ||||||| || ||| ||||||| |
|
|
| T |
11049818 |
tgaatgaagggattcctccagttaatttatttttccaaatggccaatgattgaagttttttcaaagagccaatttcatttggtatcttgccaattaaatt |
11049917 |
T |
|
| Q |
213 |
gttccctcccaaatacaaatctttgagattggagcaatatgtgaggtttgtaggaatttctcctacaagagagttattgctaagtaaaagttgttgcaat |
312 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||| |
|
|
| T |
11049918 |
gttccctcccaaatacaagtctttaagattggagcaatgtgtgaggtttgtaggaatttctcctgcaagagagttattgctgagtaaaagttgttccaat |
11050017 |
T |
|
| Q |
313 |
tgtatcaacttacccaactcctgtggaatttcaccatgaaatctattgttcatgagattgaattcagtcaaaaaagtgagattgccaacatagggtggta |
412 |
Q |
| |
|
|||| |||| ||||||||| ||||||||||| |||| || || |||||||||||||||||||| ||||||||||||||||||||||||||||||| || |
|
|
| T |
11050018 |
tgtagcaaccgacccaactcttgtggaatttctccatagaagctgttgttcatgagattgaattctgtcaaaaaagtgagattgccaacatagggtgata |
11050117 |
T |
|
| Q |
413 |
ttgatccatgcaattgttatccttctaggttcaactttgtaactctttgatgcatgagactgcatgcgattccatgccactcgcagaaatggatggaaga |
512 |
Q |
| |
|
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
11050118 |
ttgatccatgcaactgatatccttctaggttcaactttgtaactctttgatgcatgaggctgcatgtgattccatgccacttgcagaaatggatggaaga |
11050217 |
T |
|
| Q |
513 |
gttccaagattattcaagagctctatttgggtcacggtatattgtttctttgaaattaagcaatgcaaaatgatctgtttgatttgctaatgcttgtgcc |
612 |
Q |
| |
|
||||||| |||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
11050218 |
attccaag---attcaagagctccatttgggtcacggtatattgtttctttgaatttaatcaatgcaaaatgatctgtttggtttcctaatgcttgtgca |
11050314 |
T |
|
| Q |
613 |
acaattttgtttgggcaaaa |
632 |
Q |
| |
|
|||| | ||||||||||||| |
|
|
| T |
11050315 |
acaactctgtttgggcaaaa |
11050334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 26 - 755
Target Start/End: Complemental strand, 10610060 - 10609332
Alignment:
| Q |
26 |
ttttgaggtgacatatttcttgtggaatatctctttctaagttgttataagcaaatgaaaaatcggttaagcttgaaagattccctatgaatgaagggat |
125 |
Q |
| |
|
||||||| ||||| |||||||||||||||| | |||||||||||| ||| || ||||||| ||||||| |||||||||||||| ||||||||| || |
|
|
| T |
10610060 |
ttttgagacgacatgtttcttgtggaatatccccttctaagttgtttgaagtaactgaaaaacgcgttaagcatgaaagattccctacgaatgaaggaat |
10609961 |
T |
|
| Q |
126 |
tcctccggttaatttatttttccaaatgggcaatgattgaagttttttcaacgaggcaatttcaattggtatttttccatttaaattgttccctcccaaa |
225 |
Q |
| |
|
||||||||||||||| ||||||||||||| || ||||||| |||||||| ||| |||||||||| |||||||| ||| | |||||||| ||||||||| |
|
|
| T |
10609960 |
tcctccggttaatttgtttttccaaatggtcacatattgaagctttttcaaagagccaatttcaatcggtattttgccaatcaaattgtttcctcccaaa |
10609861 |
T |
|
| Q |
226 |
tacaaatctttgagattggagcaatatgtgaggtttgtaggaatttctcctacaagagagttattgctaagtaaaagttgttgcaattgtatcaacttac |
325 |
Q |
| |
|
|| ||||||||||||||||||| ||| ||||||||||||||||||||| ||| |||||||||| | || |||||||||||||||||| ||||| || |
|
|
| T |
10609860 |
cgtaactctttgagattggagcaatgtgtcaggtttgtaggaatttctcctgcaaaagagttattgatgagataaagttgttgcaattgtagcaactgac |
10609761 |
T |
|
| Q |
326 |
ccaactcctgtggaatttcaccatgaaatctattgttcatgagattgaattcagtcaaaaaagtgagattgccaacatagggtggtattgatccatgcaa |
425 |
Q |
| |
|
|||||||||| || ||| |||| || || |||||||||||||| || || | |||||| |||||||| ||||| |||| ||| ||||||||||| |
|
|
| T |
10609760 |
ccaactcctgcgggattgttccatagaagctgttgttcatgagattcaaggttgtaagaaaagtaagattgcctacatatggtgatatggatccatgcaa |
10609661 |
T |
|
| Q |
426 |
ttgttatccttctaggttcaactttgtaactctttgatgcat-gagactgcatgcgattccatgccactcgcagaaatggatggaagagttccaagatta |
524 |
Q |
| |
|
|| |||||||| |||||||||| | |||||||||| ||||| ||| ||||||| || |||| |||||| || |||||||||||| | |||||||| | |
|
|
| T |
10609660 |
ctgatatccttcaaggttcaactctataactctttgttgcatagag-ctgcatgtgactccacgccacttacataaatggatggaaaaattccaaga--a |
10609564 |
T |
|
| Q |
525 |
ttcaagagctctatttgggtcacggtatattgtttctttgaaattaagcaatgcaaaatgatctgtttgatttgctaatgcttgtgccacaattttgttt |
624 |
Q |
| |
|
| |||| ||| |||||| ||| | |||||| ||||||||| |||||||||| |||| ||| ||||| ||| ||||||| ||||||| |||||||| |
|
|
| T |
10609563 |
tctaaga-ctccatttggatcattggatattgattctttgaatttaagcaatgacaaataatcagtttggtttcctaatgccactgccacagttttgttt |
10609465 |
T |
|
| Q |
625 |
gggcaaaaccacattaaatttaaggaaaaccaaaatagaaaatgaaggtatacaaacaaaagtataggtgacaggaaagaaaaaggcttcattcggttta |
724 |
Q |
| |
|
| | ||||||||||| |||||||| |||| ||| |||| |||||||| || ||| |||||| ||||| | ||||||| | ||||||| ||||| |
|
|
| T |
10609464 |
gtaccaaaccacattatatttaaggtaaacagaaaaagaagatgaaggtgtatgtacataagtatccttgacaagcaagaaaatgacttcattttgttta |
10609365 |
T |
|
| Q |
725 |
ggagaa--aggtttatgctatataattttgttt |
755 |
Q |
| |
|
||| || ||||||||| || ||| |||||||| |
|
|
| T |
10609364 |
ggacaaagaggtttatgataaatagttttgttt |
10609332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 668 - 840
Target Start/End: Original strand, 10218537 - 10218710
Alignment:
| Q |
668 |
gaaggtatacaaacaaaagtataggtgacaggaaagaaaaaggcttcattcggtttaggagaaaggtttatgctatataattttgtttgtgtggaaaaat |
767 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
10218537 |
gaagggatacaaacaaaagtataggtgacaggaaagaaaaaggcttcattcggtttaggagaaaggtttatgctatat-attttgtttgtgtggaaaaat |
10218635 |
T |
|
| Q |
768 |
tatgtggaacagagaag-agcatatgcgttcaaattctagtggtaagagctagcattggagcc-aagtgaatcac |
840 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
10218636 |
tatgtggaacagagaagaagcatatgcgttcaaattctagtggtaagagctagcattggagccaaagtgaatcac |
10218710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 12 - 732
Target Start/End: Original strand, 10718743 - 10719460
Alignment:
| Q |
12 |
taaaattgacaagcttttgaggtgacatatttcttgtggaatatctctttctaagttgttataagcaaatgaaaaatcggttaagcttgaaagattccct |
111 |
Q |
| |
|
|||||||| |||| ||||||| ||||||||||| |||||||| ||| |||||||||||||||| || |||| | ||| | ||||||||| || |
|
|
| T |
10718743 |
taaaattgtcaagtttttgagacgacatatttctggtggaataactccgtctaagttgttataaggaaccgaaagtccccataaacatgaaagatttccc |
10718842 |
T |
|
| Q |
112 |
atgaatgaagggattcctccggttaatttatttttccaaatgggcaatgattgaagttttttcaacgaggcaatttcaattggtatttttccatttaaat |
211 |
Q |
| |
|
|||||||||||||||||||| ||||| || ||||| | ||||| || |||||| ||||||| ||| ||| ||| | ||||| ||| ||| | | | |
|
|
| T |
10718843 |
atgaatgaagggattcctccagttaaattgttttttccaatggccagaatttgaagccttttcaaagagccaacttctactggtaatttgccaatgagct |
10718942 |
T |
|
| Q |
212 |
tgttccctcccaaatacaaatctttgagattggagcaatatgtgaggtttgtaggaatttctcctacaagagagttattgctaagtaaaagttgttgcaa |
311 |
Q |
| |
|
| |||||| ||| | || |||||||||||||||||||| || |||||||||||||||| ||| ||| |||||||||| |||| ||||||||||||| |
|
|
| T |
10718943 |
tattcccttgcaaggataactctttgagattggagcaatacgtcaggtttgtaggaattttacctgcaaaagagttattgttaagataaagttgttgcaa |
10719042 |
T |
|
| Q |
312 |
ttgtatcaacttacccaactcctgtggaatttcaccatgaaatctattgttcatgagattgaattcagtcaaaaaagtgagattgccaacatagggtggt |
411 |
Q |
| |
|
||||| |||||| |||||||| ||||||||||| ||| || || ||||| || ||||||| | ||||||| | |||||||||||||| ||| | | |
|
|
| T |
10719043 |
ttgtagcaacttgcccaactcatgtggaatttctccaaagaagctgttgtttataagattgaggtttatcaaaaaggagagattgccaacatggggagat |
10719142 |
T |
|
| Q |
412 |
attgatccatgcaattgttatccttctaggttcaactttgtaactctttgatgcatgagactgcatgcgattccatgccactcgcagaaatggatggaag |
511 |
Q |
| |
|
| |||||||| || | |||||| |||||||||||| ||||||||||| ||||||| | ||||||| |||||||||||||| |||||| |||||||||| |
|
|
| T |
10719143 |
aaagatccatgtaacagatatcctcctaggttcaactctgtaactctttcatgcatggggctgcatgtgattccatgccacttgcagaagtggatggaag |
10719242 |
T |
|
| Q |
512 |
agttccaagattattcaagagctctatttgggtcacggtatattgtttctttgaaattaagcaatgcaaaatgatctgtttgatttgctaat---gcttg |
608 |
Q |
| |
|
| |||||||||| |||||||| || ||| |||| | |||| ||||||||| || |||||||| |||||||||||||| || ||||| || |
|
|
| T |
10719243 |
aattccaagatt---caagagcttcatatggatcactggttattcattctttgaatttgagcaatgctaaatgatctgtttggttacctaatgcagccac |
10719339 |
T |
|
| Q |
609 |
tgccacaattttgtttgggcaaaaccac---attaaatttaaggaaaaccaaaatagaaaatgaaggtatacaaacaaaagtataggtgacaggaaagaa |
705 |
Q |
| |
|
||||||||||||||||| || ||||||| ||||||||||||| ||| ||| |||| |||||||||| |||||| ||| ||||| |||||| |
|
|
| T |
10719340 |
tgccacaattttgtttgtgccaaaccacattattaaatttaaggtaaaaagaaaaagaagatgaaggtat------aaaagtgtagatgacaacaaagaa |
10719433 |
T |
|
| Q |
706 |
aaaggcttcattcggtttaggagaaag |
732 |
Q |
| |
|
|||| ||||||| ||||||| |||||| |
|
|
| T |
10719434 |
aaagacttcatttggtttagaagaaag |
10719460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 35 - 724
Target Start/End: Original strand, 10742570 - 10743253
Alignment:
| Q |
35 |
gacatatttcttgtggaatatctctttctaagttgttataagcaaatgaaaaatcggttaagcttgaaagattccctatgaatgaagggattcctccggt |
134 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||| ||| || |||||| |||| |||||||||||||||||| |||||| ||||||||| || |
|
|
| T |
10742570 |
gacatatttcttgtggaatatccccttctaagttgtttgaaggaaccgaaaaaagcattaaacttgaaagattccctatggatgaagagattcctccagt |
10742669 |
T |
|
| Q |
135 |
taatttatttttccaaatgggcaatgattgaagttttttcaacgaggcaatttcaattggtatttttccatttaaattgttccctcccaaatacaaatct |
234 |
Q |
| |
|
||| || || ||||||| ||||||||||||||||||||| || ||||||||||||||||||| ||| | || ||||||||| ||||| | || |
|
|
| T |
10742670 |
taaattgttattccaaacactcaatgattgaagttttttcaaatagccaatttcaattggtattttgccaatcaacttgttccctgccaaagttatgact |
10742769 |
T |
|
| Q |
235 |
ttgagattggagcaatatgtgaggtttgtaggaatttctcctacaagagagttattgctaagtaaaagttgttgcaattgtatcaacttacccaactcct |
334 |
Q |
| |
|
|| ||||| ||||||||||| | ||||||||||||||| ||| ||| ||||||||| |||| ||||||||||||||||||| ||||| ||||||||| | |
|
|
| T |
10742770 |
ttcagatttgagcaatatgtcaagtttgtaggaatttcacctgcaaaagagttattagtaagaaaaagttgttgcaattgtagcaactgacccaactctt |
10742869 |
T |
|
| Q |
335 |
gtggaatttcaccatgaaatctattgttcatgagattgaattcagtcaaaaaagtgagattgccaacatagggtggtattgatccatgcaattgttatcc |
434 |
Q |
| |
|
|||||||||| |||| ||| | ||||| || |||| || ||| |||||||||||||||||||| ||| | || ||| || || | || | |
|
|
| T |
10742870 |
gtggaatttctccatagaatgtgttgttttcaagtttgagttttatcagaaaagtgagattgccaacatggggggataaacgtccttgtaagcgataact |
10742969 |
T |
|
| Q |
435 |
ttctaggttcaactttgtaactctttgatgcatgagactgcatgcgattccatgccactcgcagaaatggatggaagagttccaagattattcaagagct |
534 |
Q |
| |
|
| |||||| ||||| | ||||||||||||||||| | |||||| |||||||| ||||| |||||| ||||||||||| ||||||| | ||||||||| |
|
|
| T |
10742970 |
tcctaggtccaactctataactctttgatgcatggggttgcatgtgattccataccacttgcagaagtggatggaagaattccaag---actcaagagct |
10743066 |
T |
|
| Q |
535 |
ctatttgggtcacggtatattgtttctttgaaattaagcaatgcaaaatgatctgtttgatttgctaat---gcttgtgccacaattttgtttgggcaaa |
631 |
Q |
| |
|
||| ||| |||| |||||| ||||||||| || |||||||| |||||||||| ||| ||| ||||| || |||||| |||||||||| || || |
|
|
| T |
10743067 |
ttatatggatcacttgatattgattctttgaatttgagcaatgccaaatgatctgattggtttcctaattgagccactgccaccattttgtttgtgccaa |
10743166 |
T |
|
| Q |
632 |
accacattaaatttaaggaaaaccaaaatagaaaatgaaggtatacaaacaaaagtataggtgacaggaaagaaaaaggcttcattcggttta |
724 |
Q |
| |
|
|| ||||||||| |||| ||| ||| |||| |||||||||| |||||| ||| ||||| |||||||||| ||||||| |||||| |
|
|
| T |
10743167 |
actgcattaaattcaaggtaaaaagaaaaagaagatgaaggtat------aaaagtgtagatgacaccaaagaaaaagacttcatttggttta |
10743253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 99 - 759
Target Start/End: Complemental strand, 10563304 - 10562648
Alignment:
| Q |
99 |
tgaaagattccctatgaatgaagggattcctccggttaatttatttttccaaatgggcaatgattgaagttttttcaacgaggcaatttcaattggtatt |
198 |
Q |
| |
|
|||||| ||||||||| |||||||||| ||||| ||||| || || ||| | | ||||| ||||| |||||||| ||| ||||||||||||||||| |
|
|
| T |
10563304 |
tgaaaggttccctatggatgaagggatccctccagttaaattgttaccaaaaaggtggaatgaatgaagctttttcaaagagccaatttcaattggtatt |
10563205 |
T |
|
| Q |
199 |
tttccatttaaattgttccctcccaaatacaaatctttgagattggagcaatatgtgaggtttgtaggaatttctcctacaagagagttattgctaagta |
298 |
Q |
| |
|
|| ||| | || ||||||||||||||| ||| ||| ||||||||||||||||||| | ||||||||||||||||||||||| |||||||| || |
|
|
| T |
10563204 |
ttcccaatcaatttgttccctcccaaaatcaagtctatgagattggagcaatatgtcaagtttgtaggaatttctcctacaaacgagttattaaggagat |
10563105 |
T |
|
| Q |
299 |
aaagttgttgcaattgtatcaacttacccaactcctgtggaatttcaccatgaaatctattgttcatgagattga-attcagtcaaaaaagtgagattgc |
397 |
Q |
| |
|
|||| ||||||| ||||| ||||| |||||||||| |||| ||||| ||| ||| |||||||| || | || ||| | ||||||| |||||||||| |
|
|
| T |
10563104 |
aaaggtgttgcagttgtagcaactgacccaactccggtgggatttctccagaaaaactattgtttccaaggtcgagattta-tcaaaaaggtgagattgc |
10563006 |
T |
|
| Q |
398 |
caacatagggtggtattgatccatgcaattgttatccttc-taggttcaactttgtaactctttgatgcatgagactgcatgcgattccatgccactcgc |
496 |
Q |
| |
|
|||||||||| | || |||||||| || || | | |||| ||||||||||| | ||||||||||||||||| | |||| | |||||| ||||||| || |
|
|
| T |
10563005 |
caacatagggagataaagatccatgtaagtgat-tacttcttaggttcaactctataactctttgatgcatggggttgcaagtgattccctgccacttgc |
10562907 |
T |
|
| Q |
497 |
agaaatggatggaagagttccaagattattcaagagctctatttgggtcacggtatattgtttctttgaaattaagcaatgcaaaatgatctgtttgatt |
596 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||||||| | | ||| |||| | |||||| ||||||||| || |||||||| |||||||||||||| || |
|
|
| T |
10562906 |
agaagtggatggaagaattccaag---attcaagagcattgtatggatcactggatattgattctttgaatttgagcaatgctaaatgatctgtttggtt |
10562810 |
T |
|
| Q |
597 |
tgctaat---gcttgtgccacaattttgtttgggcaaaaccacattaaatttaaggaaaaccaaaatagaaaatgaaggtatacaaacaaaagtataggt |
693 |
Q |
| |
|
| ||||| || |||||| |||||||||| | |||||||||||||||||||| ||| ||| |||| |||||||||| |||||||||| | |
|
|
| T |
10562809 |
tcctaatgcagccactgccaccattttgtttgtggtaaaccacattaaatttaaggtaaaaagaaaaagaagatgaaggtat------aaaagtatagat |
10562716 |
T |
|
| Q |
694 |
gacaggaaagaaaaaggcttcattcggtttaggagaaa--ggtttatgctatataattttgtttgtgt |
759 |
Q |
| |
|
|||| ||||||||| | | ||| ||||||| ||||| |||||||||| | || |||||||||||| |
|
|
| T |
10562715 |
gacaacgaagaaaaagacataatttggtttagaagaaagtggtttatgctgtttagttttgtttgtgt |
10562648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 162 - 649
Target Start/End: Original strand, 10749010 - 10749497
Alignment:
| Q |
162 |
ttgaagttttttcaacgaggcaatttcaattggtatttttccatttaaattgttccctcccaaatacaaatctttgagattggagcaatatgtgaggttt |
261 |
Q |
| |
|
|||||| |||||||| ||| ||||||||||||||||||| ||| | | |||||||||||||| || || |||||||||||||||||||||| | |||| |
|
|
| T |
10749010 |
ttgaagctttttcaaagagccaatttcaattggtattttgccaatcacattgttccctcccacatttaagcctttgagattggagcaatatgtcaagttt |
10749109 |
T |
|
| Q |
262 |
gtaggaatttctcctacaagagagttattgctaagtaaaagttgttgcaattgtatcaacttacccaactcctgtggaatttcaccatgaaatctattgt |
361 |
Q |
| |
|
| ||||||||||||| | | ||||||||| | || ||||||||||||||||| |||| ||||||||| | ||| ||||| ||| | || ||||| |
|
|
| T |
10749110 |
gaaggaatttctcctgcgaacgagttattgatgagatcaagttgttgcaattgtagcaaccgacccaactcttctgggatttctccaaggaagtcattgt |
10749209 |
T |
|
| Q |
362 |
tcatgagattgaattcagtcaaaaaagtgagattgccaacatagggtggtattgatccatgcaattgttatccttctaggttcaactttgtaactctttg |
461 |
Q |
| |
|
| | || | | || | |||||||||||||||||||| ||||| || |||||||| || || |||||||||| |||||||||||||||||||| |
|
|
| T |
10749210 |
ttccaatgtttagatttgtgagaaaagtgagattgccaacatggggtgataaagatccatgtaaatgatatccttctaagttcaactttgtaactctttc |
10749309 |
T |
|
| Q |
462 |
atgcatgagactgcatgcgattccatgccactcgcagaaatggatggaagagttccaagattattcaagagctctatttgggtcacggtatattgtttct |
561 |
Q |
| |
|
||||||| | |||||| |||||||||||||| |||||| ||||||||||| ||||||| ||||||||||| |||||||||||| |||||| |||| |
|
|
| T |
10749310 |
atgcatgggtttgcatgtgattccatgccacttgcagaagtggatggaagaattccaag---attcaagagctttatttgggtcactcgatattgattct |
10749406 |
T |
|
| Q |
562 |
ttgaaattaagcaatgcaaaatgatctgtttgatttgctaat---gcttgtgccacaattttgtttgggcaaaaccacattaaatttaagg |
649 |
Q |
| |
|
|| || || ||||||| |||||||||||||| ||| ||||| || |||||| ||||||||| || |||| ||||||||||||||| |
|
|
| T |
10749407 |
ttaaatttgtgcaatgccaaatgatctgtttggtttcctaatgcagccactgccacggttttgtttgtgccaaacgacattaaatttaagg |
10749497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 157 - 641
Target Start/End: Original strand, 10765105 - 10765589
Alignment:
| Q |
157 |
aatgattgaagttttttcaacgaggcaatttcaattggtatttttccatttaaattgttccctcccaaatacaaatctttgagattggagcaatatgtga |
256 |
Q |
| |
|
||||| ||||| |||||||| ||| ||||||||||| ||||||| || | || ||||||||||||||| ||| ||| |||||||||||||||| || | |
|
|
| T |
10765105 |
aatgaatgaaggtttttcaaagagccaatttcaattagtattttccctgtcaatttgttccctcccaaaatcaagtctatgagattggagcaatacgtca |
10765204 |
T |
|
| Q |
257 |
ggtttgtaggaatttctcctacaagagagttattgctaagtaaaagttgttgcaattgtatcaacttacccaactcctgtggaatttcaccatgaaatct |
356 |
Q |
| |
|
|||| |||||||||||||| || |||||||| || |||||||||||| ||||| ||||| ||| ||||||||||||||||| ||| ||| || |
|
|
| T |
10765205 |
agtttataggaatttctcctgtaaacgagttattaaggagataaagttgttgcagttgtagcaactgaccgaactcctgtggaatttctccagaaaaact |
10765304 |
T |
|
| Q |
357 |
attgttcatgagattga-attcagtcaaaaaagtgagattgccaacatagggtggtattgatccatgcaattgttatccttctaggttcaactttgtaac |
455 |
Q |
| |
|
|||||| || |||| ||| | ||| |||||||||||| |||| |||||| | || |||||||| || || |||||| |||||||||||| |||||| |
|
|
| T |
10765305 |
attgttttgaaggttgagattta-tcagaaaagtgagattaccaagatagggagataaagatccatgtaactgatatcctgctaggttcaactctgtaac |
10765403 |
T |
|
| Q |
456 |
tctttgatgcatgagactgcatgcgattccatgccactcgcagaaatggatggaagagttccaagattattcaagagctctatttgggtcacggtatatt |
555 |
Q |
| |
|
|||||||||||||| ||||||| |||||||||||||| || || ||||||||||| ||||||| ||||||||||| ||| ||| |||| ||||| |
|
|
| T |
10765404 |
cctttgatgcatgaggctgcatgtgattccatgccactttcaaaagtggatggaagaattccaag---attcaagagctttatatggatcacttgatatt |
10765500 |
T |
|
| Q |
556 |
gtttctttgaaattaagcaatgcaaaatgatctgtttgatttgctaat---gcttgtgccacaattttgtttgggcaaaaccacattaa |
641 |
Q |
| |
|
| ||||||||| || |||||||| || ||||||| ||| ||| ||||| || |||||| |||||||||| || |||||||||||| |
|
|
| T |
10765501 |
gattctttgaatttgagcaatgccaattgatctgattggtttcctaattgagccactgccaccattttgtttgtgccaaaccacattaa |
10765589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 655 - 815
Target Start/End: Original strand, 11050330 - 11050492
Alignment:
| Q |
655 |
caaaatagaaaatgaaggtatacaaacaaaagtataggtgacaggaaagaaaaaggcttcattcggtttaggagaaaggtttatgctatataattttgtt |
754 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
11050330 |
caaaaaagaaaatgaaggtatacaaacaaaagtataggtgataagaaagaaaaaggcttcattcggtttaggagaaaggtttatgctgtatatttttgtt |
11050429 |
T |
|
| Q |
755 |
tgtgtggaaaaattatg-tggaacagagaag-agcatatgcgttcaaattctagtggtaagag |
815 |
Q |
| |
|
||||||||||||||||| ||||| ||||||| | ||||||| || ||||| |||||||||||| |
|
|
| T |
11050430 |
tgtgtggaaaaattatgttggaatagagaagaaacatatgcatttaaattatagtggtaagag |
11050492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 390 - 605
Target Start/End: Original strand, 9838551 - 9838763
Alignment:
| Q |
390 |
gagattgccaacatagggtggtattgatccatgcaattgttatccttctaggttcaactttgtaactctttgatgcatgagactgcatgcgattccatgc |
489 |
Q |
| |
|
||||||||||| || |||| || ||||||||||| | ||||||| || |||||| ||||||||||||||||||||| | |||||| |||||||||| |
|
|
| T |
9838551 |
gagattgccaatgtaaggtgacatggatccatgcaacttgtatccttgtaagttcaattttgtaactctttgatgcatggggttgcatgtgattccatgc |
9838650 |
T |
|
| Q |
490 |
cactcgcagaaatggatggaagagttccaagattattcaagagctctatttgggtcacggtatattgtttctttgaaattaagcaatgcaaaatgatctg |
589 |
Q |
| |
|
|| | |||||| ||||| ||||| |||||||| || |||| ||| ||||||||||| | |||||| ||||||||| | |||||||||| |||||| | |
|
|
| T |
9838651 |
cagttgcagaagtggatagaagaattccaaga--atctaaga-ctccatttgggtcactggatattgattctttgaattggagcaatgcaagatgatcag |
9838747 |
T |
|
| Q |
590 |
tttgatttgctaatgc |
605 |
Q |
| |
|
|||| ||| ||||||| |
|
|
| T |
9838748 |
tttggtttcctaatgc |
9838763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 380 - 500
Target Start/End: Complemental strand, 7190998 - 7190878
Alignment:
| Q |
380 |
tcaaaaaagtgagattgccaacatagggtggtattgatccatgcaattgttatccttctaggttcaactttgtaactctttgatgcatgagactgcatgc |
479 |
Q |
| |
|
||||||||| |||||||||||||| ||| | ||| ||||||||| || |||||||| | ||| |||| | |||||||||||||||| ||||||||| |
|
|
| T |
7190998 |
tcaaaaaagagagattgccaacatggggagatatcaatccatgcagctgatatccttccaagtttaactcggcaactctttgatgcatgggactgcatgt |
7190899 |
T |
|
| Q |
480 |
gattccatgccactcgcagaa |
500 |
Q |
| |
|
|||||||| ||||| |||||| |
|
|
| T |
7190898 |
gattccataccacttgcagaa |
7190878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 411 - 491
Target Start/End: Original strand, 19608109 - 19608189
Alignment:
| Q |
411 |
tattgatccatgcaattgttatccttctaggttcaactttgtaactctttgatgcatgagactgcatgcgattccatgcca |
491 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||||| | | ||||||||||||||||| | ||||||| |||||||||||| |
|
|
| T |
19608109 |
tattgatccatgcaattcatatccttgtaggttcaattctataactctttgatgcatggggctgcatgtgattccatgcca |
19608189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 10764942 - 10765008
Alignment:
| Q |
12 |
taaaattgacaagcttttgaggtgacatatttcttgtggaatatctctttctaagttgttataagca |
78 |
Q |
| |
|
||||| || |||| |||||||| |||||||||||||||||||||||| | |||| |||||| ||||| |
|
|
| T |
10764942 |
taaaaatgtcaagtttttgaggcgacatatttcttgtggaatatctcctcctaatttgttagaagca |
10765008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 10548987 - 10548894
Alignment:
| Q |
182 |
caatttcaattggtatttttccatttaaattgttccctcccaaatacaaatctttgagattggagcaatatgtgaggtttgtaggaatttctcc |
275 |
Q |
| |
|
||||||||||||||||||||||| | ||||||||||||| ||| | || | ||| || ||| | |||| ||| | |||||||||||||||||| |
|
|
| T |
10548987 |
caatttcaattggtatttttccaatcaaattgttccctctcaaggataagtatttaaggttgaaacaatttgtcaagtttgtaggaatttctcc |
10548894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 391 - 491
Target Start/End: Complemental strand, 10578992 - 10578892
Alignment:
| Q |
391 |
agattgccaacatagggtggtattgatccatgcaattgttatccttctaggttcaactttgtaactctttgatgcatgagactgcatgcgattccatgcc |
490 |
Q |
| |
|
|||||||||||||| || | ||| ||||||||||| | ||||||| || || ||||| |||| |||||||||| || |||||||| |||||||| ||| |
|
|
| T |
10578992 |
agattgccaacatatggagatatggatccatgcaacttttatcctggcagctttaacttggtaaatctttgatgcttgggactgcatacgattccaggcc |
10578893 |
T |
|
| Q |
491 |
a |
491 |
Q |
| |
|
| |
|
|
| T |
10578892 |
a |
10578892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 10549148 - 10549045
Alignment:
| Q |
21 |
caagcttttgaggtgacatatttcttgtggaatatctctttctaagttgttataagcaaatgaaaaatcggttaagcttgaaagattccctatgaatgaa |
120 |
Q |
| |
|
|||| ||||||| |||||||||||||||||||||||| || || |||||||||| || ||||||| | | || |||||||||||||| ||||| | |
|
|
| T |
10549148 |
caagtttttgagacgacatatttcttgtggaatatctccctccaaattgttataagaaactgaaaaacctatcaaatatgaaagattccctaagaatgga |
10549049 |
T |
|
| Q |
121 |
ggga |
124 |
Q |
| |
|
|||| |
|
|
| T |
10549048 |
ggga |
10549045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 390 - 487
Target Start/End: Complemental strand, 10602739 - 10602642
Alignment:
| Q |
390 |
gagattgccaacatagggtggtattgatccatgcaattgttatccttctaggttcaactttgtaactctttgatgcatgagactgcatgcgattccat |
487 |
Q |
| |
|
||||||||||| ||| || | ||||||||||||||||| || |||| | ||||| |||||||||||||||||| || ||| |||| |||||||| |
|
|
| T |
10602739 |
gagattgccaatatacggagatattgatccatgcaatttgtacccttgcaacttcaagtttgtaactctttgatgcttgggaccgcatatgattccat |
10602642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 380 - 473
Target Start/End: Original strand, 10662298 - 10662391
Alignment:
| Q |
380 |
tcaaaaaagtgagattgccaacatagggtggtattgatccatgcaattgttatccttctaggttcaactttgtaactctttgatgcatgagact |
473 |
Q |
| |
|
||||||||| |||||||||||||| ||| | ||| |||||||||| | ||||| |||| || |||| | |||||||||| ||||||||||| |
|
|
| T |
10662298 |
tcaaaaaagagagattgccaacatggggagatatgaatccatgcaagttatatccatctaagtctaactctataactctttgttgcatgagact |
10662391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 113; Significance: 9e-57; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 27 - 759
Target Start/End: Complemental strand, 12905535 - 12904804
Alignment:
| Q |
27 |
tttgaggtgacatatttcttgtggaatatctctttctaagttgttataagcaaatgaaaaatcggttaagcttgaaagattccctatgaatgaagggatt |
126 |
Q |
| |
|
||||||| ||||||||||||||||||||||| || || |||||| || || ||| | | ||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
12905535 |
tttgaggaaacatatttcttgtggaatatctccctcaaaattgttaccagaaactgatagacgtgttaagcttgaaatatttcctatgaatgaagggatt |
12905436 |
T |
|
| Q |
127 |
cctccggttaatttatttttccaaatgggcaatgattgaagttttttcaacgaggcaatttcaattggtatttttccatttaaattgttccctcccaaat |
226 |
Q |
| |
|
|| |||||||| || ||| |||||| || || |||||| |||||||| ||| | |||||| |||||||||| ||| | | || |||||| ||||| |
|
|
| T |
12905435 |
ccaccggttaacttgtttctccaaacactcattgtttgaagctttttcaaagagccgatttcagttggtattttaccaatgagatggttcccattcaaat |
12905336 |
T |
|
| Q |
227 |
acaaatctttgagattggagcaatatgtgaggtttgtaggaatttctcctacaagagagttattgctaagtaaaagttgttgcaattgtatcaacttacc |
326 |
Q |
| |
|
|||| |||||||||||||||||||| |||||||||||||| || ||||||| ||| |||||||| || | |||||||||||| |||| ||||| ||| |
|
|
| T |
12905335 |
acaataacttgagattggagcaatatgtcaggtttgtaggaatctcacctacaaaagaattattgctgagaataagttgttgcaaatgtagcaactgacc |
12905236 |
T |
|
| Q |
327 |
caactcctgtggaatttcaccatgaaatctattgttcatgagattgaattcagtcaaaaaagtgagattgccaacatagggtggtattgatccatgcaat |
426 |
Q |
| |
|
||| ||||| |||||||| ||| || | |||| | | | || ||| ||||||||||||| ||||| ||| | || |||||||| || |
|
|
| T |
12905235 |
caaatcctgaggaatttctccaaagaagttgttgtctgtaatgtcgacacttttcagaaaagtgagattggaaacatggggagataaagatccatgtaac |
12905136 |
T |
|
| Q |
427 |
tgttatccttctaggttcaactttgtaactctttgatgcatgagactgcatgcgattccatgccactcgcagaaatggatggaagagttccaagattatt |
526 |
Q |
| |
|
|| |||| ||||||| |||||| |||||||| || ||||||| | ||||||| |||||||||||||| |||||||||||||||||| ||||||| ||| |
|
|
| T |
12905135 |
tgatatctttctaggctcaactctgtaactcgttcatgcatggggctgcatgtgattccatgccacttgcagaaatggatggaagaattccaag---att |
12905039 |
T |
|
| Q |
527 |
caagagctctatttgggtcacggtatattgtttctttgaaattaagcaatgcaaaatgatctgtttgatttgctaat---gcttgtgccacaattttgtt |
623 |
Q |
| |
|
||||||| | | |||||||| ||||| ||||||||| || |||||||| |||||||| ||||| ||| ||| | || |||| ||||||| | |
|
|
| T |
12905038 |
caagagcattgtatgggtcactagttattgattctttgaatttgagcaatgccaaatgatcagtttggtttcctattgcagccactgccgtaattttgat |
12904939 |
T |
|
| Q |
624 |
tgggcaaaaccacattaaatttaaggaaaaccaaaatagaaaatgaaggtatacaaacaaaagtataggtgacaggaaagaaaaaggcttca-ttcggtt |
722 |
Q |
| |
|
||| ||||||||||||||||| |||| || | ||| || | |||||||||| |||||| |||||||| |||||||||||||||| || |||| |
|
|
| T |
12904938 |
tggacaaaaccacattaaattgaaggtaagcagaaaaaggagatgaaggtat------aaaagtggaggtgacaacaaagaaaaaggcttcattttggtt |
12904845 |
T |
|
| Q |
723 |
taggagaaa----ggtttatgctatataattttgtttgtgt |
759 |
Q |
| |
|
||| ||||| |||||||||||| | |||||||||||| |
|
|
| T |
12904844 |
tagaagaaaaagtggtttatgctatttcgttttgtttgtgt |
12904804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 91 - 649
Target Start/End: Complemental strand, 12946926 - 12946368
Alignment:
| Q |
91 |
gttaagcttgaaagattccctatgaatgaagggattcctccggttaatttatttttccaaatgggcaatgattgaagttttttcaacgaggcaatttcaa |
190 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||||||||| |||| || |||||| || | || || ||||| || ||||| ||| | |||||| |
|
|
| T |
12946926 |
gttaagcttgaaagatttccaatgaatgaagggattcctccgattaaattgtttttcgcaacagtcattgcttgaaccttcttcaaagagccgatttcag |
12946827 |
T |
|
| Q |
191 |
ttggtatttttccatttaaattgttccctcccaaatacaaatctttgagattggagcaatatgtgaggtttgtaggaatttctcctacaagagagttatt |
290 |
Q |
| |
|
|||||||||| || | | || |||||| | |||| ||||| |||||| ||||| |||||||| |||||||||||||| || ||| ||| ||||||||| |
|
|
| T |
12946826 |
ttggtattttaccgatgagatggttcccactcaaaaacaaaaatttgagtttggaacaatatgtcaggtttgtaggaatctcacctgcaaaagagttatt |
12946727 |
T |
|
| Q |
291 |
gctaagtaaaagttgttgcaattgtatcaacttacccaactcctgtggaatttcaccatgaaatctattgttcatgagattgaattcagtcaaaaaagtg |
390 |
Q |
| |
|
| | || |||||||||||||| |||| ||||| ||||||||||||||||||||| ||| || | |||| | |||| | ||| ||||||| |
|
|
| T |
12946726 |
gttgagaaaaagttgttgcaaatgtagcaactgacccaactcctgtggaatttctccaaagaagttgttgtctccaatgttgagtgttttcagaaaagtg |
12946627 |
T |
|
| Q |
391 |
agattgccaacatagggtggtattgatccatgcaattgttatccttctaggttcaactttgtaactctttgatgcatgagactgcatgcgattccatgcc |
490 |
Q |
| |
|
|||||| ||||| ||| | || |||||||| || || |||| |||||| |||||| |||||||| || ||||||| | ||||||| ||||||||||| |
|
|
| T |
12946626 |
agattggaaacatggggagataaagatccatgtaactgatatctttctagagtcaactgtgtaactcgttcatgcatggggctgcatgtgattccatgcc |
12946527 |
T |
|
| Q |
491 |
actcgcagaaatggatggaagagttccaagattattcaagagctctatttgggtcacggtatattgtttctttgaaattaagcaatgcaaaatgatctgt |
590 |
Q |
| |
|
||| |||||| || ||||| || ||||||| ||||||||||| | | |||||||| | | |||| ||||||||| || |||||||| |||||||| || |
|
|
| T |
12946526 |
acttgcagaagtgaatggatgaattccaag---attcaagagctttgtatgggtcactggaaattgattctttgaatttgagcaatgccaaatgatcagt |
12946430 |
T |
|
| Q |
591 |
ttgatttgctaat---gcttgtgccacaattttgtttgggcaaaaccacattaaatttaagg |
649 |
Q |
| |
|
||| ||| ||| | || |||| ||||||||||| | |||||||||||||||||||| |
|
|
| T |
12946429 |
ttggtttcctattgcagccactgcccttattttgtttggaccaaaccacattaaatttaagg |
12946368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 91 - 344
Target Start/End: Complemental strand, 12930561 - 12930308
Alignment:
| Q |
91 |
gttaagcttgaaagattccctatgaatgaagggattcctccggttaatttatttttccaaatgggcaatgattgaagttttttcaacgaggcaatttcaa |
190 |
Q |
| |
|
||||||| ||||||||| ||||| ||||||||||||||| ||||||| | || |||| || | | || |||||| |||||||| ||| ||||||||| |
|
|
| T |
12930561 |
gttaagcatgaaagatttcctataaatgaagggattccttcggttaaatggttattcccaacagatattgcttgaagctttttcaaagagccaatttcaa |
12930462 |
T |
|
| Q |
191 |
ttggtatttttccatttaaattgttccctcccaaatacaaatctttgagattggagcaatatgtgaggtttgtaggaatttctcctacaagagagttatt |
290 |
Q |
| |
|
|||||||||| ||||| | || |||||| ||||||||| ||||||||||||||||||||| |||||||||||||| || ||||||| ||| ||||| |
|
|
| T |
12930461 |
ttggtattttaccattgagatggttcccattcaaatacaataatttgagattggagcaatatgtcaggtttgtaggaatctcacctacaaaagaattatt |
12930362 |
T |
|
| Q |
291 |
gctaagtaaaagttgttgcaattgtatcaacttacccaactcctgtggaatttc |
344 |
Q |
| |
|
| | || | ||| |||||||| |||| ||||| ||||||||||||||||||||| |
|
|
| T |
12930361 |
ggtgagaataagatgttgcaaatgtagcaactgacccaactcctgtggaatttc |
12930308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 91 - 344
Target Start/End: Complemental strand, 12956363 - 12956110
Alignment:
| Q |
91 |
gttaagcttgaaagattccctatgaatgaagggattcctccggttaatttatttttccaaatgggcaatgattgaagttttttcaacgaggcaatttcaa |
190 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| || ||||| || ||| |||||| | || | |||||| |||||||| ||| | |||||| |
|
|
| T |
12956363 |
gttaagcttgaaagatttcctatgaatgaagggattccaccagttaacttgtttctccaaacagtcattctttgaagctttttcaaagagccgatttcag |
12956264 |
T |
|
| Q |
191 |
ttggtatttttccatttaaattgttccctcccaaatacaaatctttgagattggagcaatatgtgaggtttgtaggaatttctcctacaagagagttatt |
290 |
Q |
| |
|
|||||||||| ||||| | || |||||| |||| |||| ||||||||||||||||||||| | |||||| ||||| || ||||||| ||||||||| |
|
|
| T |
12956263 |
ttggtattttaccattgagatggttcccattcaaaaacaataatttgagattggagcaatatgtcaagtttgttggaatctcacctacaaaagagttatt |
12956164 |
T |
|
| Q |
291 |
gctaagtaaaagttgttgcaattgtatcaacttacccaactcctgtggaatttc |
344 |
Q |
| |
|
||| || ||||| ||||||| |||| ||||| ||||||||||||||||||||| |
|
|
| T |
12956163 |
gctgagagaaagtcgttgcaaatgtagcaactgacccaactcctgtggaatttc |
12956110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 384 - 759
Target Start/End: Complemental strand, 12897557 - 12897185
Alignment:
| Q |
384 |
aaaagtgagattgccaacatagggtggtattgatccatgcaattgttatccttctaggttcaactttgtaactctttgatgcatgagactgcatgcgatt |
483 |
Q |
| |
|
|||||||||||||| ||||| ||| | || |||||||| || || |||| || |||| |||||| |||||||| || ||||||| | ||||||| |||| |
|
|
| T |
12897557 |
aaaagtgagattgcaaacatggggagataaagatccatgtaactgatatctttttaggctcaactctgtaactcgttcatgcatggggctgcatgtgatt |
12897458 |
T |
|
| Q |
484 |
ccatgccactcgcagaaatggatggaagagttccaagattattcaagagctctatttgggtcacggtatattgtttctttgaaattaagcaatgcaaaat |
583 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||||||| |||||||||| | | |||||||| | | |||| ||||||||| || |||||||| |||| |
|
|
| T |
12897457 |
ccatgccacttgcagaaatggatggaagaattccaag---attcaagagcattgtatgggtcactggaaattgattctttgaatttgagcaatgccaaat |
12897361 |
T |
|
| Q |
584 |
gatctgtttgatttgctaat---gcttgtgccacaattttgtttgggcaaaaccacattaaatttaaggaaaaccaaaatagaaaatgaaggtatacaaa |
680 |
Q |
| |
|
|||| ||||| ||| ||| | || |||| |||||||||||| | |||||||||||||||||||| || | ||| || |||||||||| |
|
|
| T |
12897360 |
gatcagtttggtttcctattgcagccaatgccctaattttgtttggaccaaaccacattaaatttaaggtaagcataaaaaggggatgaaggtat----- |
12897266 |
T |
|
| Q |
681 |
caaaagtataggtgacaggaaagaaaaaggcttca-ttcggtttaggagaaa--ggtttatgctatataattttgtttgtgt |
759 |
Q |
| |
|
|||||| ||||||||| |||||||||| ||||| || ||||||| ||||| |||||||||||| ||||||||||||||| |
|
|
| T |
12897265 |
-aaaagtgtaggtgacaacaaagaaaaagacttcattttggtttagaagaaagtggtttatgctatttaattttgtttgtgt |
12897185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 27 - 344
Target Start/End: Complemental strand, 12897914 - 12897597
Alignment:
| Q |
27 |
tttgaggtgacatatttcttgtggaatatctctttctaagttgttataagcaaatgaaaaatcggttaagcttgaaagattccctatgaatgaagggatt |
126 |
Q |
| |
|
||||||| ||||||||||||||||||||||| || || ||||| | || || ||| | | ||||||||||||||||| || ||||||||||||||| |
|
|
| T |
12897914 |
tttgaggaaacatatttcttgtggaatatctccctcaaaattgttttcagaaactgacagacgtgttaagcttgaaagatttccaatgaatgaagggatt |
12897815 |
T |
|
| Q |
127 |
cctccggttaatttatttttccaaatgggcaatgattgaagttttttcaacgaggcaatttcaattggtatttttccatttaaattgttccctcccaaat |
226 |
Q |
| |
|
||||||||||| || || |||| || || ||||||||| |||||||| ||| | | |||| |||||||||| ||| | | || |||||| ||||| |
|
|
| T |
12897814 |
cctccggttaaattgttattccgaacaaacattgattgaagctttttcaaagagccgaattcagttggtattttaccaatgagatggttcccattcaaat |
12897715 |
T |
|
| Q |
227 |
acaaatctttgagattggagcaatatgtgaggtttgtaggaatttctcctacaagagagttattgctaagtaaaagttgttgcaattgtatcaacttacc |
326 |
Q |
| |
|
|||| |||||||||||||||||||| |||||||||||||| || ||||||| ||| |||||| | || | ||| |||||||| |||| ||||| ||| |
|
|
| T |
12897714 |
acaataacttgagattggagcaatatgtcaggtttgtaggaatctcacctacaaaagaattattggtgagaataaggtgttgcaaatgtagcaactgacc |
12897615 |
T |
|
| Q |
327 |
caactcctgtggaatttc |
344 |
Q |
| |
|
||| ||||| |||||||| |
|
|
| T |
12897614 |
caaatcctgaggaatttc |
12897597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 384 - 759
Target Start/End: Complemental strand, 12956070 - 12955698
Alignment:
| Q |
384 |
aaaagtgagattgccaacatagggtggtattgatccatgcaattgttatccttctaggttcaactttgtaactctttgatgcatgagactgcatgcgatt |
483 |
Q |
| |
|
|||||||||||||| ||||| ||| | || |||||||| || || |||| || |||| |||||| |||||||| || ||||||| | ||||||| |||| |
|
|
| T |
12956070 |
aaaagtgagattgcaaacatggggagataaagatccatgtaactgatatctttttaggctcaactctgtaactcgttcatgcatggggctgcatgtgatt |
12955971 |
T |
|
| Q |
484 |
ccatgccactcgcagaaatggatggaagagttccaagattattcaagagctctatttgggtcacggtatattgtttctttgaaattaagcaatgcaaaat |
583 |
Q |
| |
|
|| ||||||| |||||||||||||||||| ||||||| |||||||||| | | |||||||| | |||| ||||||||| || |||||||| |||| |
|
|
| T |
12955970 |
ccttgccacttgcagaaatggatggaagaattccaag---attcaagagcattgtatgggtcacttgaaattgattctttgaatttgagcaatgccaaat |
12955874 |
T |
|
| Q |
584 |
gatctgtttgatttgctaatgc---ttgtgccacaattttgtttgggcaaaaccacattaaatttaaggaaaaccaaaatagaaaatgaaggtatacaaa |
680 |
Q |
| |
|
|||| ||||| ||| ||| ||| |||| |||||||||||| | |||||||||||||||||||| || | |||| || | |||||||||| |
|
|
| T |
12955873 |
gatcagtttggtttcctattgcagtcattgccttaattttgtttggaccaaaccacattaaatttaaggtaagcaaaaaaaggagatgaaggtat----- |
12955779 |
T |
|
| Q |
681 |
caaaagtataggtgacaggaaagaaaaaggcttca-ttcggtttaggagaaa--ggtttatgctatataattttgtttgtgt |
759 |
Q |
| |
|
|||||| |||||||| ||||||||| ||||| || ||||||| ||||| |||||||||||| || |||||||||||| |
|
|
| T |
12955778 |
-aaaagtggaggtgacaacaaagaaaaatacttcattttggtttagaagaaaatggtttatgctatttagttttgtttgtgt |
12955698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 384 - 759
Target Start/End: Complemental strand, 12930268 - 12929896
Alignment:
| Q |
384 |
aaaagtgagattgccaacatagggtggtattgatccatgcaattgttatccttctaggttcaactttgtaactctttgatgcatgagactgcatgcgatt |
483 |
Q |
| |
|
|||||||||||||| ||||| ||| | || |||||||| || || |||| || |||| |||||| |||||||| || ||||||| | || |||| |||| |
|
|
| T |
12930268 |
aaaagtgagattgcaaacatggggagataaagatccatgtaactgatatctttttaggctcaactctgtaactcgttcatgcatggggctacatgtgatt |
12930169 |
T |
|
| Q |
484 |
ccatgccactcgcagaaatggatggaagagttccaagattattcaagagctctatttgggtcacggtatattgtttctttgaaattaagcaatgcaaaat |
583 |
Q |
| |
|
|||||||||| |||||| ||||||||||| ||||||| ||||||||| | | |||||||| ||||| ||||||||| || |||||||| | || |
|
|
| T |
12930168 |
ccatgccacttgcagaagtggatggaagaattccaag---attcaagagtattgtatgggtcactagttattgattctttgaatttgagcaatgccagat |
12930072 |
T |
|
| Q |
584 |
gatctgtttgatttgctaat---gcttgtgccacaattttgtttgggcaaaaccacattaaatttaaggaaaaccaaaatagaaaatgaaggtatacaaa |
680 |
Q |
| |
|
|||| ||||| ||| ||| | || |||| |||||||||||| |||||||||||||||||||||| || | ||| || | |||||||||| |
|
|
| T |
12930071 |
gatcagtttgctttcctattgcagccactgccctaattttgtttggacaaaaccacattaaatttaaggtaatcataaaaaggagatgaaggtat----- |
12929977 |
T |
|
| Q |
681 |
caaaagtataggtgacaggaaagaaaaaggcttca-ttcggtttaggagaaa--ggtttatgctatataattttgtttgtgt |
759 |
Q |
| |
|
|||||| ||||||||| |||||||||| ||||| || ||||||| ||||| |||||||||||| || |||||||||||| |
|
|
| T |
12929976 |
-aaaagtgtaggtgacaacaaagaaaaagacttcattttggtttagaagaaagtggtttatgctatttagttttgtttgtgt |
12929896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 498 - 759
Target Start/End: Complemental strand, 12955678 - 12955420
Alignment:
| Q |
498 |
gaaatggatggaagagttccaagattattcaagagctctatttgggtcacggtatattgtttctttgaaattaagcaatgcaaaatgatctgtttgattt |
597 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||| | | |||||||| | |||| ||||||||| || |||||||| |||||||| ||||| ||| |
|
|
| T |
12955678 |
gaaatggatggaagaattccaagatt---caagagcattgtatgggtcactagaaattgattctttgaatttgagcaatgccaaatgatcagtttggttt |
12955582 |
T |
|
| Q |
598 |
gctaatgcttg---tgccacaattttgtttgggcaaaaccacattaaatttaaggaaaaccaaaatagaaaatgaaggtatacaaacaaaagtataggtg |
694 |
Q |
| |
|
||| ||| |||| |||||||||||| | |||||||||||||||||||| || | |||| || | |||||||||| |||||| ||||| |
|
|
| T |
12955581 |
cctattgcagtcactgccgtaattttgtttggaccaaaccacattaaatttaaggtaagcaaaaaaaggagatgaaggtat------aaaagtggaggtg |
12955488 |
T |
|
| Q |
695 |
acaggaaagaaaaaggcttca-ttcggtttaggagaaa--ggtttatgctatataattttgtttgtgt |
759 |
Q |
| |
|
||| ||||||||| ||||| || ||||||| ||||| |||||||||||| || |||||||||||| |
|
|
| T |
12955487 |
acaacaaagaaaaatacttcattttggtttagaagaaaatggtttatgctatttagttttgtttgtgt |
12955420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 108; Significance: 9e-54; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 36 - 676
Target Start/End: Original strand, 17925275 - 17925915
Alignment:
| Q |
36 |
acatatttcttgtggaatatctctttctaagttgttataagcaaatgaaaaatcggttaagcttgaaagattccctatgaatgaagggattcctccggtt |
135 |
Q |
| |
|
||||||||||||||||||||||| || || |||||| |||| ||| | | ||||||| ||||||||| ||||||||||||||||||||||| ||| |
|
|
| T |
17925275 |
acatatttcttgtggaatatctccctcaaaattgttaagagcagctgatagacgtgttaagcatgaaagatttcctatgaatgaagggattcctccagtt |
17925374 |
T |
|
| Q |
136 |
aatttatttttccaaatgggcaatgattgaagttttttcaacgaggcaatttcaattggtatttttccatttaaattgttccctcccaaatacaaatctt |
235 |
Q |
| |
|
|| || || | | || | || | ||||||||||||||| ||| | |||||| |||||||||| ||| | | || |||||| | |||| |||| || |
|
|
| T |
17925375 |
aaattgttatgcgcaacagtcatggcttgaagttttttcaaagagccgatttcagttggtattttaccaatgagatggttcccactcaaaaacaataatt |
17925474 |
T |
|
| Q |
236 |
tgagattggagcaatatgtgaggtttgtaggaatttctcctacaagagagttattgctaagtaaaagttgttgcaattgtatcaacttacccaactcctg |
335 |
Q |
| |
|
||||||| || |||||||| |||||||||||||| || ||||||| ||| |||||||| || |||||||| ||||| |||| ||||| |||||||||||| |
|
|
| T |
17925475 |
tgagattagaacaatatgtcaggtttgtaggaatctcacctacaaaagaattattgctgagaaaaagttgctgcaaatgtagcaactgacccaactcctg |
17925574 |
T |
|
| Q |
336 |
tggaatttcaccatgaaatctattgttcatgagattgaattcagtcaaaaaagtgagattgccaacatagggtggtattgatccatgcaattgttatcct |
435 |
Q |
| |
|
||||||||| ||| || | |||| | | || ||| |||||||||||||| ||||| ||| | || |||||||| || || |||| | |
|
|
| T |
17925575 |
tggaatttctccaaagaagttgttgtctccaatgtcgagagttttcagaaaagtgagattgcaaacatggggagataaagatccatgtaactgatatctt |
17925674 |
T |
|
| Q |
436 |
tctaggttcaactttgtaactctttgatgcatgagactgcatgcgattccatgccactcgcagaaatggatggaagagttccaagattattcaagagctc |
535 |
Q |
| |
|
| |||| |||||| |||||||| || ||||||| | ||||||| |||||||||||||| |||||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
17925675 |
tttaggctcaactctgtaactcgttcatgcatggggctgcatgtgattccatgccacttgcagaaatggatggaagaattccaag---attcaagagctt |
17925771 |
T |
|
| Q |
536 |
tatttgggtcacggtatattgtttctttgaaattaagcaatgcaaaatgatctgtttgatttgctaat---gcttgtgccacaattttgtttgggcaaaa |
632 |
Q |
| |
|
| | |||||||| | |||| ||||||||| || |||||||| |||||||| ||||| ||| ||| | || |||| |||||||||||| | ||| |
|
|
| T |
17925772 |
tgtatgggtcactagaaattgattctttgaatttgagcaatgccaaatgatcagtttggtttcctattgcagccactgccctaattttgtttggaccaaa |
17925871 |
T |
|
| Q |
633 |
ccacattaaatttaaggaaaaccaaaatagaaaatgaaggtata |
676 |
Q |
| |
|
|||||||||||| |||| || | |||| || | ||||||||||| |
|
|
| T |
17925872 |
ccacattaaattgaaggtaagcaaaaaaaggagatgaaggtata |
17925915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 358 - 468
Target Start/End: Original strand, 31469350 - 31469460
Alignment:
| Q |
358 |
ttgttcatgagattgaattcagtcaaaaaagtgagattgccaacatagggtggtattgatccatgcaattgttatccttctaggttcaactttgtaactc |
457 |
Q |
| |
|
|||||||||||||| || | |||||||||| |||||| |||||||| |||| ||| ||||||||||| | ||||||||||| ||||| | |||||||| |
|
|
| T |
31469350 |
ttgttcatgagattcaagtttgtcaaaaaagagagattaccaacataaggtgatatagatccatgcaacttatatccttctagtttcaattctgtaactc |
31469449 |
T |
|
| Q |
458 |
tttgatgcatg |
468 |
Q |
| |
|
|||||| |||| |
|
|
| T |
31469450 |
tttgattcatg |
31469460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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