View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2813R-Insertion-1 (Length: 960)

Name: NF2813R-Insertion-1
Description: NF2813R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2813R-Insertion-1
NF2813R-Insertion-1
[»] chr4 (63 HSPs)
chr4 (9-905)||(42958444-42959339)
chr4 (836-905)||(624315-624384)
chr4 (836-905)||(30079845-30079914)
chr4 (836-905)||(39344983-39345052)
chr4 (837-905)||(26206980-26207048)
chr4 (834-905)||(6141781-6141852)
chr4 (835-905)||(5932160-5932230)
chr4 (835-905)||(22819647-22819717)
chr4 (832-905)||(14451388-14451461)
chr4 (836-905)||(41486146-41486215)
chr4 (837-905)||(439263-439331)
chr4 (833-901)||(13263404-13263472)
chr4 (845-950)||(21260306-21260410)
chr4 (837-905)||(32546360-32546428)
chr4 (840-899)||(47240820-47240879)
chr4 (835-905)||(13086020-13086090)
chr4 (836-950)||(36111354-36111468)
chr4 (836-905)||(46405977-46406046)
chr4 (836-905)||(47965738-47965807)
chr4 (832-881)||(51741352-51741401)
chr4 (836-905)||(56474767-56474836)
chr4 (837-905)||(9118867-9118935)
chr4 (837-905)||(21617183-21617251)
chr4 (837-905)||(47099022-47099090)
chr4 (835-889)||(23822264-23822318)
chr4 (837-903)||(33860647-33860713)
chr4 (835-950)||(33899285-33899399)
chr4 (838-904)||(41262349-41262415)
chr4 (832-901)||(4915680-4915749)
chr4 (839-903)||(38715251-38715313)
chr4 (836-905)||(41082317-41082386)
chr4 (834-903)||(51225530-51225599)
chr4 (837-905)||(1816003-1816071)
chr4 (837-905)||(7627848-7627916)
chr4 (837-905)||(50273070-50273138)
chr4 (837-905)||(51887663-51887731)
chr4 (834-905)||(39158102-39158173)
chr4 (833-904)||(52204846-52204917)
chr4 (835-905)||(17475320-17475390)
chr4 (832-905)||(14010121-14010194)
chr4 (840-905)||(14527647-14527712)
chr4 (835-892)||(50050636-50050692)
chr4 (838-903)||(51194270-51194335)
chr4 (836-905)||(51852075-51852144)
chr4 (835-904)||(56557731-56557800)
chr4 (837-905)||(13389456-13389523)
chr4 (837-905)||(30170023-30170091)
chr4 (835-903)||(38864741-38864809)
chr4 (845-905)||(49768321-49768381)
chr4 (838-905)||(2575792-2575859)
chr4 (834-905)||(20118778-20118849)
chr4 (834-905)||(40609607-40609678)
chr4 (835-905)||(8455859-8455928)
chr4 (836-898)||(21172279-21172341)
chr4 (867-905)||(48335584-48335622)
chr4 (835-905)||(54000696-54000766)
chr4 (838-903)||(2401611-2401676)
chr4 (834-905)||(9162063-9162133)
chr4 (837-898)||(14443198-14443259)
chr4 (834-903)||(24235317-24235385)
chr4 (837-870)||(39312642-39312675)
chr4 (836-905)||(40348793-40348861)
chr4 (834-903)||(51255743-51255812)
[»] chr2 (57 HSPs)
chr2 (835-901)||(29684619-29684685)
chr2 (836-905)||(18176939-18177008)
chr2 (836-905)||(35589390-35589459)
chr2 (838-905)||(13347818-13347885)
chr2 (835-905)||(670470-670540)
chr2 (838-903)||(433851-433916)
chr2 (837-905)||(4952483-4952551)
chr2 (837-905)||(29051656-29051724)
chr2 (836-905)||(36802895-36802964)
chr2 (837-905)||(37257449-37257518)
chr2 (833-905)||(2220989-2221061)
chr2 (837-905)||(18723594-18723662)
chr2 (837-905)||(25881544-25881612)
chr2 (835-905)||(39449265-39449335)
chr2 (837-902)||(44711995-44712060)
chr2 (837-905)||(8427552-8427620)
chr2 (837-905)||(12889835-12889903)
chr2 (837-905)||(28245728-28245796)
chr2 (837-905)||(34431830-34431898)
chr2 (834-905)||(4299529-4299600)
chr2 (838-957)||(4758590-4758708)
chr2 (838-905)||(26206848-26206915)
chr2 (837-903)||(6895895-6895961)
chr2 (839-905)||(11167522-11167588)
chr2 (835-905)||(28679314-28679384)
chr2 (833-875)||(38257698-38257740)
chr2 (836-882)||(42223969-42224015)
chr2 (838-903)||(4384056-4384120)
chr2 (840-905)||(26738883-26738948)
chr2 (837-905)||(6999071-6999139)
chr2 (836-904)||(18510674-18510742)
chr2 (833-905)||(22525997-22526069)
chr2 (835-899)||(44254597-44254661)
chr2 (832-903)||(5031918-5031989)
chr2 (835-890)||(5200243-5200298)
chr2 (835-874)||(10711734-10711773)
chr2 (835-902)||(30977887-30977954)
chr2 (836-903)||(39449122-39449189)
chr2 (835-905)||(2841832-2841902)
chr2 (835-892)||(7552552-7552610)
chr2 (835-905)||(9634439-9634509)
chr2 (867-901)||(13265995-13266029)
chr2 (839-905)||(14233722-14233788)
chr2 (837-903)||(18876927-18876993)
chr2 (835-905)||(30546372-30546442)
chr2 (839-905)||(35705496-35705562)
chr2 (835-905)||(36517194-36517264)
chr2 (834-904)||(38821363-38821433)
chr2 (835-905)||(39213773-39213843)
chr2 (835-876)||(4061991-4062032)
chr2 (835-900)||(7648390-7648454)
chr2 (840-905)||(9194432-9194497)
chr2 (836-905)||(12498639-12498708)
chr2 (834-903)||(14954605-14954673)
chr2 (864-905)||(16677699-16677740)
chr2 (840-905)||(37077792-37077857)
chr2 (835-904)||(40504222-40504291)
[»] chr3 (48 HSPs)
chr3 (835-957)||(39671048-39671171)
chr3 (836-905)||(30909028-30909097)
chr3 (836-905)||(44677487-44677556)
chr3 (835-905)||(10206976-10207046)
chr3 (836-905)||(8821629-8821698)
chr3 (837-905)||(49363254-49363322)
chr3 (835-905)||(26996314-26996384)
chr3 (835-905)||(32767674-32767744)
chr3 (835-905)||(37508501-37508571)
chr3 (836-905)||(43904972-43905041)
chr3 (836-905)||(50206973-50207042)
chr3 (837-905)||(24482966-24483034)
chr3 (837-905)||(33375860-33375928)
chr3 (837-905)||(46982906-46982973)
chr3 (838-905)||(29634075-29634142)
chr3 (838-905)||(39697225-39697292)
chr3 (835-958)||(49417573-49417696)
chr3 (835-905)||(11633611-11633681)
chr3 (835-905)||(46019460-46019530)
chr3 (835-905)||(54773757-54773827)
chr3 (836-905)||(42683826-42683895)
chr3 (835-892)||(54694129-54694186)
chr3 (840-905)||(55013006-55013071)
chr3 (837-905)||(22371191-22371259)
chr3 (833-905)||(48405406-48405478)
chr3 (838-905)||(20080074-20080141)
chr3 (837-904)||(25188469-25188536)
chr3 (834-905)||(25641574-25641644)
chr3 (837-903)||(50638356-50638420)
chr3 (839-905)||(18741119-18741185)
chr3 (837-903)||(37927210-37927276)
chr3 (836-905)||(8846490-8846559)
chr3 (836-905)||(24095409-24095478)
chr3 (836-905)||(28419217-28419286)
chr3 (840-905)||(46253625-46253690)
chr3 (837-905)||(3347125-3347193)
chr3 (836-876)||(37410883-37410923)
chr3 (837-905)||(51343408-51343476)
chr3 (837-905)||(55399999-55400067)
chr3 (835-870)||(3281742-3281777)
chr3 (837-903)||(4494242-4494308)
chr3 (835-905)||(7867715-7867784)
chr3 (835-905)||(21196122-21196192)
chr3 (837-875)||(30567993-30568031)
chr3 (835-905)||(50559215-50559285)
chr3 (837-875)||(54274213-54274251)
chr3 (836-901)||(41717262-41717326)
chr3 (837-890)||(51873393-51873446)
[»] chr7 (46 HSPs)
chr7 (835-905)||(16980295-16980365)
chr7 (832-905)||(32815163-32815236)
chr7 (840-950)||(37808723-37808832)
chr7 (837-950)||(39331985-39332097)
chr7 (833-900)||(46773650-46773717)
chr7 (835-905)||(13162917-13162987)
chr7 (835-905)||(21822602-21822672)
chr7 (834-905)||(41025758-41025829)
chr7 (835-905)||(39231731-39231801)
chr7 (836-905)||(28036743-28036812)
chr7 (833-905)||(13729722-13729794)
chr7 (837-950)||(29162935-29163047)
chr7 (837-905)||(43573546-43573614)
chr7 (838-905)||(19786082-19786149)
chr7 (838-905)||(27163662-27163729)
chr7 (835-905)||(11564891-11564961)
chr7 (835-905)||(41402505-41402575)
chr7 (836-905)||(33180713-33180782)
chr7 (837-905)||(21023120-21023188)
chr7 (838-905)||(3343333-3343400)
chr7 (835-950)||(13906416-13906530)
chr7 (838-905)||(29002609-29002676)
chr7 (838-905)||(46812908-46812975)
chr7 (835-905)||(44184562-44184632)
chr7 (837-905)||(10055635-10055703)
chr7 (837-905)||(31844608-31844675)
chr7 (834-905)||(38779747-38779819)
chr7 (834-905)||(21559795-21559866)
chr7 (836-903)||(37899218-37899285)
chr7 (832-886)||(12645933-12645987)
chr7 (840-905)||(41458599-41458664)
chr7 (833-905)||(7990075-7990146)
chr7 (837-905)||(34978296-34978364)
chr7 (835-903)||(43255573-43255640)
chr7 (836-903)||(35452578-35452645)
chr7 (836-903)||(37899322-37899389)
chr7 (834-905)||(39137150-39137220)
chr7 (834-892)||(30061278-30061336)
chr7 (839-905)||(35588894-35588960)
chr7 (832-958)||(39823804-39823930)
chr7 (835-905)||(41893913-41893983)
chr7 (834-903)||(12007191-12007260)
chr7 (840-905)||(24532946-24533011)
chr7 (837-905)||(26153646-26153712)
chr7 (836-905)||(47355982-47356051)
chr7 (835-904)||(47448824-47448893)
[»] chr5 (50 HSPs)
chr5 (836-905)||(8267823-8267892)
chr5 (837-905)||(21064229-21064297)
chr5 (837-905)||(35099008-35099076)
chr5 (834-905)||(23126346-23126417)
chr5 (835-905)||(5042246-5042316)
chr5 (834-905)||(9977116-9977187)
chr5 (835-905)||(8675436-8675506)
chr5 (832-898)||(18511806-18511872)
chr5 (837-905)||(18842324-18842392)
chr5 (834-905)||(19839989-19840060)
chr5 (837-903)||(4430941-4431007)
chr5 (835-905)||(32912036-32912106)
chr5 (836-905)||(6292120-6292189)
chr5 (837-905)||(5821615-5821682)
chr5 (837-905)||(25871449-25871517)
chr5 (837-905)||(43441738-43441806)
chr5 (835-898)||(33620606-33620669)
chr5 (835-958)||(37700458-37700581)
chr5 (835-905)||(15267782-15267852)
chr5 (836-905)||(38704200-38704269)
chr5 (840-905)||(43196628-43196693)
chr5 (837-905)||(4771497-4771565)
chr5 (836-904)||(42446295-42446363)
chr5 (840-903)||(6241624-6241687)
chr5 (830-905)||(6446521-6446596)
chr5 (836-903)||(8920077-8920144)
chr5 (838-905)||(15478659-15478726)
chr5 (837-904)||(27440479-27440545)
chr5 (835-905)||(611862-611932)
chr5 (839-905)||(3674852-3674918)
chr5 (835-905)||(43214062-43214132)
chr5 (836-905)||(22402630-22402698)
chr5 (838-903)||(41173253-41173318)
chr5 (837-905)||(6517712-6517780)
chr5 (837-905)||(34124621-34124689)
chr5 (837-905)||(41175709-41175777)
chr5 (834-898)||(41724186-41724250)
chr5 (835-874)||(2224800-2224839)
chr5 (835-902)||(35464590-35464656)
chr5 (847-905)||(39088870-39088929)
chr5 (835-905)||(1079956-1080025)
chr5 (831-905)||(9581573-9581647)
chr5 (835-905)||(17402925-17402995)
chr5 (835-905)||(19481185-19481255)
chr5 (837-903)||(21922150-21922216)
chr5 (834-904)||(32872902-32872972)
chr5 (835-905)||(35301594-35301664)
chr5 (836-905)||(189706-189775)
chr5 (836-905)||(30640789-30640858)
chr5 (836-905)||(38730862-38730931)
[»] chr1 (62 HSPs)
chr1 (836-905)||(1852954-1853023)
chr1 (836-905)||(33024574-33024643)
chr1 (835-898)||(37178701-37178764)
chr1 (831-905)||(8411721-8411795)
chr1 (836-905)||(20565121-20565190)
chr1 (836-905)||(26585882-26585951)
chr1 (837-905)||(3603111-3603179)
chr1 (837-905)||(44294015-44294083)
chr1 (835-905)||(902636-902706)
chr1 (835-905)||(1790506-1790576)
chr1 (835-905)||(46082124-46082194)
chr1 (840-905)||(29585996-29586061)
chr1 (837-905)||(756856-756924)
chr1 (837-905)||(9008225-9008293)
chr1 (837-905)||(36577415-36577483)
chr1 (834-958)||(51286317-51286441)
chr1 (834-901)||(26837449-26837516)
chr1 (838-905)||(33054091-33054158)
chr1 (836-958)||(47214207-47214329)
chr1 (836-905)||(7128117-7128186)
chr1 (834-903)||(37588680-37588749)
chr1 (845-905)||(21340530-21340590)
chr1 (837-905)||(35136844-35136912)
chr1 (835-905)||(3024753-3024823)
chr1 (835-905)||(32915075-32915145)
chr1 (836-905)||(7171239-7171308)
chr1 (837-958)||(21486267-21486388)
chr1 (834-903)||(26547231-26547299)
chr1 (836-905)||(34040503-34040572)
chr1 (836-905)||(46172410-46172478)
chr1 (835-903)||(7078506-7078573)
chr1 (837-905)||(16986938-16987006)
chr1 (836-904)||(45008168-45008236)
chr1 (841-905)||(47215732-47215796)
chr1 (834-905)||(10890049-10890120)
chr1 (838-905)||(48325968-48326035)
chr1 (835-905)||(15705065-15705135)
chr1 (836-905)||(35539362-35539432)
chr1 (839-950)||(51191790-51191900)
chr1 (835-905)||(52362480-52362550)
chr1 (834-903)||(11097890-11097958)
chr1 (836-905)||(26967209-26967278)
chr1 (836-905)||(34008179-34008248)
chr1 (837-905)||(13489662-13489730)
chr1 (837-905)||(32938859-32938926)
chr1 (834-905)||(21433404-21433475)
chr1 (834-892)||(45383985-45384044)
chr1 (834-901)||(50328148-50328215)
chr1 (834-896)||(11822954-11823016)
chr1 (835-905)||(30535989-30536059)
chr1 (837-903)||(44789148-44789214)
chr1 (837-903)||(50433769-50433835)
chr1 (835-905)||(50775160-50775230)
chr1 (835-905)||(50824739-50824809)
chr1 (836-905)||(1689390-1689459)
chr1 (836-905)||(4514457-4514526)
chr1 (836-905)||(9566964-9567033)
chr1 (856-905)||(25259102-25259151)
chr1 (835-892)||(29632432-29632488)
chr1 (836-905)||(34254354-34254423)
chr1 (836-905)||(47721408-47721477)
chr1 (836-905)||(47728400-47728469)
[»] chr8 (46 HSPs)
chr8 (837-905)||(45529249-45529317)
chr8 (830-905)||(5864196-5864271)
chr8 (835-905)||(33589233-33589303)
chr8 (835-905)||(41520966-41521036)
chr8 (836-905)||(16966784-16966853)
chr8 (836-905)||(30136018-30136087)
chr8 (837-905)||(1633893-1633961)
chr8 (837-905)||(38708299-38708367)
chr8 (835-905)||(6991811-6991881)
chr8 (835-905)||(35564287-35564357)
chr8 (835-905)||(36110136-36110206)
chr8 (837-905)||(7592849-7592917)
chr8 (837-905)||(11017805-11017873)
chr8 (837-905)||(16613634-16613702)
chr8 (835-905)||(5277707-5277777)
chr8 (839-950)||(40739871-40739981)
chr8 (837-905)||(16872159-16872227)
chr8 (837-905)||(34018808-34018876)
chr8 (837-905)||(34490160-34490228)
chr8 (835-903)||(41600307-41600375)
chr8 (837-903)||(18651370-18651436)
chr8 (859-905)||(32847690-32847736)
chr8 (840-905)||(9549202-9549267)
chr8 (834-903)||(44064354-44064423)
chr8 (836-900)||(8645164-8645228)
chr8 (838-890)||(34591263-34591315)
chr8 (837-905)||(34718115-34718183)
chr8 (845-905)||(37783974-37784034)
chr8 (836-903)||(3946239-3946306)
chr8 (832-951)||(1871572-1871690)
chr8 (835-905)||(12783764-12783834)
chr8 (836-905)||(9208065-9208134)
chr8 (836-905)||(31596947-31597016)
chr8 (836-905)||(32843944-32844012)
chr8 (835-904)||(33605082-33605151)
chr8 (837-901)||(12707149-12707213)
chr8 (835-903)||(29440527-29440595)
chr8 (835-905)||(34473947-34474016)
chr8 (862-905)||(11658003-11658046)
chr8 (838-905)||(16327155-16327222)
chr8 (836-903)||(36064029-36064095)
chr8 (859-905)||(7956010-7956056)
chr8 (835-905)||(24798361-24798431)
chr8 (837-903)||(29991412-29991478)
chr8 (835-905)||(41159892-41159962)
chr8 (836-905)||(42443103-42443171)
[»] chr6 (33 HSPs)
chr6 (834-905)||(2777319-2777390)
chr6 (835-950)||(2075410-2075524)
chr6 (832-905)||(13143385-13143458)
chr6 (836-903)||(30036799-30036866)
chr6 (840-903)||(30152535-30152598)
chr6 (836-905)||(4820250-4820319)
chr6 (836-905)||(11547532-11547601)
chr6 (837-905)||(754441-754509)
chr6 (837-905)||(35213564-35213632)
chr6 (836-905)||(3610964-3611033)
chr6 (837-905)||(2689067-2689135)
chr6 (837-902)||(14986751-14986812)
chr6 (834-905)||(24842365-24842436)
chr6 (835-905)||(2242025-2242095)
chr6 (835-905)||(5327595-5327665)
chr6 (835-905)||(33651018-33651088)
chr6 (836-905)||(3198959-3199028)
chr6 (835-905)||(15318191-15318261)
chr6 (835-905)||(17551382-17551452)
chr6 (836-905)||(18141304-18141373)
chr6 (836-905)||(20822871-20822940)
chr6 (834-903)||(33421757-33421826)
chr6 (835-904)||(34442067-34442136)
chr6 (837-905)||(6531186-6531254)
chr6 (835-874)||(2943444-2943483)
chr6 (835-905)||(34504015-34504088)
chr6 (835-905)||(8505777-8505847)
chr6 (838-888)||(12204614-12204663)
chr6 (835-905)||(15368826-15368896)
chr6 (835-905)||(17417239-17417308)
chr6 (835-905)||(30423598-30423668)
chr6 (835-905)||(32459520-32459590)
chr6 (832-905)||(23628355-23628428)
[»] scaffold0321 (1 HSPs)
scaffold0321 (836-905)||(19635-19704)
[»] scaffold0449 (1 HSPs)
scaffold0449 (837-950)||(9203-9315)
[»] scaffold0471 (1 HSPs)
scaffold0471 (835-905)||(5-75)
[»] scaffold0221 (1 HSPs)
scaffold0221 (835-905)||(8212-8282)
[»] scaffold0035 (1 HSPs)
scaffold0035 (836-897)||(72058-72119)
[»] scaffold0532 (1 HSPs)
scaffold0532 (837-905)||(10964-11032)
[»] scaffold0204 (1 HSPs)
scaffold0204 (867-905)||(23106-23144)
[»] scaffold0045 (1 HSPs)
scaffold0045 (837-903)||(41755-41821)
[»] scaffold0174 (1 HSPs)
scaffold0174 (840-905)||(34797-34862)


Alignment Details
Target: chr4 (Bit Score: 696; Significance: 0; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 696; E-Value: 0
Query Start/End: Original strand, 9 - 905
Target Start/End: Original strand, 42958444 - 42959339
Alignment:
Q  9 gcccaaaaaagagttgcatgtgtctttcatattccaacgttaatttaaaaagacacaccttattcgtctcctataatctccaaagaccttattcgccacg 108  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  42958444 gcccaaaaaaaagttgcatgtgtctttcaaattccaacgttaatttaaaaagacacaccttattggtctcctataatctccaaagaccctattcgccacg 42958543  T
Q  109 tcccgtttcacataacgcatgcatttatcattattgtcatacccgagnnnnnnnnng-gatgtttttaacttttaaattttattcaaaacaaccttacac 207  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |           || ||||||||||||||||||| |||||||||||||||||||    
T  42958544 tcccgtttcacataacgcatgcatttatcattatcgtcatacccggggaaaaaaagaagacgtttttaacttttaaatttgattcaaaacaaccttacac 42958643  T
Q  208 aaggacagagtcatcgcaggaaacgtcaaaactacttcaatagcaggttttgcaagagttactctccaagcgaatgaaaaattattagctttcgacacaa 307  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42958644 aaggaca-agtcatcgcaggaaacgtcaaaactacttcattagcaggttttgcaagagttactctccaagcgaatgaaaaatgattagctttcgacacaa 42958742  T
Q  308 aagtttacttttaaatagattaattaaatattagaactccttatttcaggagccctatccgtaaaatgaacttcgatatactttataaaattattagttt 407  Q
    |||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42958743 aagtttacttttaaattgattaatcaaatattggaactccttatttcaggagccctatccgtaaaatgaacttcgatatactttataaaattattagttt 42958842  T
Q  408 cttgataatcaaacacgtggacaaactgaagtccggtactcctattcacatgcttcacaaacaacatacaattcttctcattgttccctttttgcataga 507  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  42958843 cttgataatcaaacacgtggacaaactgaagtctggtactcctattcacatgcttcacaaacaacatacaatttttctcattgttcccttcttgcataga 42958942  T
Q  508 catggaacaannnnnnnnnctttgtataatttccaccacagattgtatttgatcttcagtagcttgaccaaataataataaaatcattgacaaacatgag 607  Q
    ||||||||||         ||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  42958943 catggaacaatttttttttctttgtataatttccaccacacattgtatttgatcttcaataggttgaccaaataataataaaatcattgacaaacatgag 42959042  T
Q  608 acgtgacactaatgttctatttatacgagctctcaacaccttttgctcaccgttttgacacaacctccggtattaaattggaaagcctatctatacacat 707  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  42959043 acgtgacactaacgttctatttttacgagctctcaacaccttttgctcaccgttttgacacaacctccggtattaaattggaaagcctatctatacacac 42959142  T
Q  708 gacaaaaggataaggagagattgaatctccctgctttatgtctttcgtcatagtaaagaaattggacctatctccatttcacttgacattttttctcaag 807  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  42959143 gacaaaaggataaggagagattgaatctccctcctttatgtctttggtcatagtaaagaaattggacctatctccatttcacttgaca-tttttctcaag 42959241  T
Q  808 agacatcattgagtgcataatcacattaagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||| ||||||||||| ||| ||||||||||||||||||    
T  42959242 agacatcattgagtgcataatcacattaagagaaatgatatttgaacatccatttagtggcaacttttgcaacaactttatctcttatactcacatta 42959339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 624384 - 624315
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  624384 agagaaatgatatttgaacatctatttagtgacaacttttgcaacaactttctctctcatactcacatta 624315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 30079845 - 30079914
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||  |||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  30079845 agagaaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcacatta 30079914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 39345052 - 39344983
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||  |||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  39345052 agagaaatgatatttgaacatccattttgtgacaatttttgcaacaactttctctctcatactcacatta 39344983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 26207048 - 26206980
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  ||||||||| |||||||||||||||||||||||| ||| ||||||||    
T  26207048 gagaaatgatatttgaacatccatttagtgataatttttgcaacaattttctctctcatattcacatta 26206980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 834 - 905
Target Start/End: Complemental strand, 6141852 - 6141781
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||| ||| ||||| |||||| ||||||||||| ||||||||| ||||||||||||    
T  6141852 taagagaaatgatatttgaatattcatttattgacaacttttgcaacaactttctctctcatactcacatta 6141781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 5932230 - 5932160
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||| |||||  |||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  5932230 aagagaaatgatatttaaacatccatttagtgacaacttttgcaacaactttctctctcatactcacatta 5932160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 22819647 - 22819717
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||  |||| ||||||| ||||||||||| ||||||||| ||||||||||||    
T  22819647 aagagaaatgatatttgaacatccattttgtgacaacttttgcaacaactttctctctcatactcacatta 22819717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 832 - 905
Target Start/End: Original strand, 14451388 - 14451461
Alignment:
Q  832 attaagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||| ||||||||||||||||||||  |||||||||||| ||| ||||||| ||||||||| ||||||||||||    
T  14451388 attatgagaaatgatatttgaacatccatttagtgacaactttagcaacaactttctctctcatactcacatta 14451461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 41486215 - 41486146
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||  ||||||||| || ||||||||||| ||||||||| ||||||||||||    
T  41486215 agagaaatgatatttgaacatccatttagtgataacttttgcaacaactttctctctcatactcacatta 41486146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 439331 - 439263
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||| ||||||||||||  ||||| |||||||||| ||||||||||||||||| ||||||||||||    
T  439331 gagaaataatatttgaacatccatttaatgacaattttcgcaacaattttctctctcatactcacatta 439263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 833 - 901
Target Start/End: Complemental strand, 13263472 - 13263404
Alignment:
Q  833 ttaagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcac 901  Q
    ||||||||| |||||||||||||| ||||| ||||||| |||||| |||| ||||||||||||||||||    
T  13263472 ttaagagaagtgatatttgaacatctattttgtgacaacttttgctacaactttctctcttatactcac 13263404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 845 - 950
Target Start/End: Original strand, 21260306 - 21260410
Alignment:
Q  845 atatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacattannnnnnnacttatctctctattgttatgaatttccgtgc 944  Q
    ||||||||||||| |||||||||||| ||||||||||| ||| ||||| ||||||||||||         |||||||||||||||||||  |||||||||    
T  21260306 atatttgaacattcatttagtgacaacttttgcaacaactttttctctcatactcacattatttttttctttatctctctattgttatg-gtttccgtgc 21260404  T
Q  945 caatac 950  Q
    ||||||    
T  21260405 caatac 21260410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 32546428 - 32546360
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||||||| |||||||||||||  |||| ||| ||||| ||||||||||||    
T  32546428 gagaaatgatatttgaacatttattttgtgacaatttttgttacaactttttctctcatactcacatta 32546360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 840 - 899
Target Start/End: Original strand, 47240820 - 47240879
Alignment:
Q  840 aaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactc 899  Q
    |||||||||||||||||| ||||| |||||||||||||||||| ||||||||| ||||||    
T  47240820 aaatgatatttgaacattcatttattgacaatttttgcaacaactttctctctcatactc 47240879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 13086020 - 13086090
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||| |||| |||| ||||||| ||||| ||||| ||||||||| ||||||||||||    
T  13086020 aagagaaatgatatttgatcattcattttgtgacaacttttgtaacaactttctctctcatactcacatta 13086090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 836 - 950
Target Start/End: Complemental strand, 36111468 - 36111354
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacattannnnnnnac-ttatctctctattgttatga 934  Q
    |||||||||||||||||||||  ||||||| |||| ||||||||||| ||| ||||| ||||||||||||       || |||||||||||||| ||||     
T  36111468 agagaaatgatatttgaacatccatttagtaacaacttttgcaacaactttatctctcatactcacattacttttttactttatctctctattgctatg- 36111370  T
Q  935 atttccgtgccaatac 950  Q
     |||||||||||||||    
T  36111369 gtttccgtgccaatac 36111354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 46406046 - 46405977
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||| ||| |||| ||||||| ||||||||||| ||| ||||| ||||||||||||    
T  46406046 agagaaatgatatttgaatattcatttggtgacaacttttgcaacaactttttctctcatactcacatta 46405977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 47965738 - 47965807
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||| ||||||||||||| ||||||| |||| ||||||||||| ||| ||||| ||||||||||||    
T  47965738 agagaaataatatttgaacattcatttagttacaacttttgcaacaactttttctctcatactcacatta 47965807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 832 - 881
Target Start/End: Original strand, 51741352 - 51741401
Alignment:
Q  832 attaagagaaatgatatttgaacatttatttagtgacaatttttgcaaca 881  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  51741352 attacgagaaatgatatttgaacatttatttagtgacaacttttgcaaca 51741401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 56474836 - 56474767
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||| | ||||  | ||||||||||  |||||||||||||||||||||||||||    
T  56474836 agagaaatgatatttgaacaatcatttttttacaatttttgtgacaattttctctcttatactcacatta 56474767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 9118935 - 9118867
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||| ||||||||||||  ||||| |||||| ||||||||||||||||||||| ||| ||||||||    
T  9118935 gagaaattatatttgaacatccatttaatgacaacttttgcaacaattttctctctcataatcacatta 9118867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 21617183 - 21617251
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  |||| |||||||||||||  |||| ||||||||| ||||||||||||    
T  21617183 gagaaatgatatttgaacatccattttgtgacaatttttgttacaactttctctctcatactcacatta 21617251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 47099022 - 47099090
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||| ||| |||| ||||||| ||||||||||| ||||||||  ||||||||||||    
T  47099022 gagaaatgatatttgaatattcattttgtgacaacttttgcaacaactttctctcacatactcacatta 47099090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 835 - 889
Target Start/End: Complemental strand, 23822318 - 23822264
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctc 889  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||    
T  23822318 aagagaaatgatatttgaacattcatttaatgacaacttttgcaacaactttctc 23822264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 837 - 903
Target Start/End: Original strand, 33860647 - 33860713
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    ||||||||||||||||||||  |||| |||||||||||||  |||| ||||||||| ||||||||||    
T  33860647 gagaaatgatatttgaacatccatttggtgacaatttttgtgacaactttctctctcatactcacat 33860713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 835 - 950
Target Start/End: Complemental strand, 33899399 - 33899285
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacattannnnnnnacttatctctctattgttatga 934  Q
    |||| ||||||||| ||||||| |||| |||||||| ||||||||||| ||||| ||  ||||||||||||         |||||||||||||||||||     
T  33899399 aagataaatgatatatgaacatctattaagtgacaacttttgcaacaactttctttcacatactcacattatttttttctttatctctctattgttatg- 33899301  T
Q  935 atttccgtgccaatac 950  Q
     |||||||||||||||    
T  33899300 gtttccgtgccaatac 33899285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 838 - 904
Target Start/End: Complemental strand, 41262415 - 41262349
Alignment:
Q  838 agaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatt 904  Q
    ||||||||||||| ||||  |||||  ||||||||||||||||||||||||||||  ||||||||||    
T  41262415 agaaatgatatttaaacaactattttttgacaatttttgcaacaattttctctctcttactcacatt 41262349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 832 - 901
Target Start/End: Complemental strand, 4915749 - 4915680
Alignment:
Q  832 attaagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcac 901  Q
    |||||||||||||||||||||||||  |||| ||||||||||||   |||| ||||||||| ||||||||    
T  4915749 attaagagaaatgatatttgaacatccattttgtgacaatttttatgacaactttctctctcatactcac 4915680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 839 - 903
Target Start/End: Original strand, 38715251 - 38715313
Alignment:
Q  839 gaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    |||||||||||||||||||||||| |||| ||||||||  |||||||||||||  ||||||||||    
T  38715251 gaaatgatatttgaacatttatttggtgataatttttgtgacaattttctctc--atactcacat 38715313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 41082317 - 41082386
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||||||| |||| || ||||   |||| ||||||||| ||||||||||||    
T  41082317 agagaaatgatatttgaacatttatttggtgataacttttatgacaactttctctctcatactcacatta 41082386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 834 - 903
Target Start/End: Complemental strand, 51225599 - 51225530
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    ||||||||||||||||||||||| ||||| |||| |||||||   |||| ||||||||| ||||||||||    
T  51225599 taagagaaatgatatttgaacatctattttgtgataatttttatgacaactttctctctaatactcacat 51225530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 1816071 - 1816003
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||| ||||| |||||||||||||  |||||||| ||| | ||| ||||||||    
T  1816071 gagaaatgatatttgaacatctattttgtgacaatttttgtgacaattttatctttcatattcacatta 1816003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 7627848 - 7627916
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||| ||| ||||| ||| ||||||||  | |||||||||||| ||||||||||||    
T  7627848 gagaaatgatatttgaatattcatttaatgataatttttgtgataattttctctctcatactcacatta 7627916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 50273138 - 50273070
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  ||||| |||||| ||||||||||| ||||||||  |||| |||||||    
T  50273138 gagaaatgatatttgaacatccatttaatgacaacttttgcaacaactttctctcacatacccacatta 50273070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 51887663 - 51887731
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  |||| ||||||| |||||| |||| ||||||||| ||||||| ||||    
T  51887663 gagaaatgatatttgaacatccattttgtgacaacttttgctacaactttctctctcatactcaaatta 51887731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 834 - 905
Target Start/End: Original strand, 39158102 - 39158173
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||| | ||||  ||| ||||||||  |||| ||||||||| ||||||||||||    
T  39158102 taagagaaatgatatttgaacaatcattttttgataatttttgtgacaactttctctctcatactcacatta 39158173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 833 - 904
Target Start/End: Original strand, 52204846 - 52204917
Alignment:
Q  833 ttaagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatt 904  Q
    ||||||||||||||||||||||| ||||||  | ||||||||||  | |||||||||| | |||||||||||    
T  52204846 ttaagagaaatgatatttgaacaattattttttaacaatttttgttataattttctctttcatactcacatt 52204917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 17475320 - 17475390
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||| |||| |||| || ||||   |||| ||||||||| ||||||||||||    
T  17475320 aagagaaatgatatttgaacattcatttggtgataacttttttgacaactttctctctcatactcacatta 17475390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 832 - 905
Target Start/End: Complemental strand, 14010194 - 14010121
Alignment:
Q  832 attaagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||||||  |||| ||||||| |||| ||| || ||| ||||| ||||||| ||||    
T  14010194 attaagagaaatgatatttgaacatccattttgtgacaacttttacaataactttttctctcatactcatatta 14010121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 840 - 905
Target Start/End: Original strand, 14527647 - 14527712
Alignment:
Q  840 aaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||  |||| ||||||| |||||| |||| |||| |||| ||||||||||||    
T  14527647 aaatgatatttgaacatccattttgtgacaacttttgctacaactttcactctcatactcacatta 14527712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 835 - 892
Target Start/End: Original strand, 50050636 - 50050692
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctct 892  Q
    ||||||||||||||||||||| ||||||  ||||||||||||  ||||||||||||||    
T  50050636 aagagaaatgatatttgaacaattattt-ttgacaatttttgtgacaattttctctct 50050692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 838 - 903
Target Start/End: Original strand, 51194270 - 51194335
Alignment:
Q  838 agaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    |||||| ||||||||||||  |||||||||||| |||| |||||| ||||||| | ||||||||||    
T  51194270 agaaataatatttgaacatccatttagtgacaacttttacaacaactttctctttcatactcacat 51194335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 51852075 - 51852144
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||||||| |||| ||||||||  |||| ||| ||||  ||| ||||||||    
T  51852075 agagaaatgatatttgaacatttattttgtgagaatttttgtgacaactttttctcccatattcacatta 51852144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 835 - 904
Target Start/End: Original strand, 56557731 - 56557800
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatt 904  Q
    |||||||||||||||||||||   ||||  |||||| |||||  |||||||||||||| |||||||||||    
T  56557731 aagagaaatgatatttgaacaacaattttatgacaacttttgtgacaattttctctctcatactcacatt 56557800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 13389523 - 13389456
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||   |||  |||||||||||||| |||| |||||||||||||| |||||||    
T  13389523 gagaaatgatatttgaacaaccattg-gtgacaatttttgcgacaactttctctcttatacacacatta 13389456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 30170091 - 30170023
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||| |||||||||||| |||||  |||||| |||||  |||| ||||||||| ||||||||||||    
T  30170091 gagaaattatatttgaacatctattttatgacaacttttgtgacaactttctctctcatactcacatta 30170023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 835 - 903
Target Start/End: Complemental strand, 38864809 - 38864741
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    ||||||||||||||||| ||| |||||| ||||||| ||||   |||| ||||||||| ||||||||||    
T  38864809 aagagaaatgatatttgtacaattattttgtgacaacttttttgacaactttctctctcatactcacat 38864741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 845 - 905
Target Start/End: Complemental strand, 49768381 - 49768321
Alignment:
Q  845 atatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||| ||||| |||| ||||||||| |||| ||||||||| ||||||| ||||    
T  49768381 atatttgaacatctattttgtgataatttttgctacaactttctctctaatactcatatta 49768321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 838 - 905
Target Start/End: Complemental strand, 2575859 - 2575792
Alignment:
Q  838 agaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||| ||||||  ||||| ||||||| |||| ||||||||  ||||||| ||||    
T  2575859 agaaatgatatttgaacaattattttttgacagtttttgcgacaactttctctcacatactcatatta 2575792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 834 - 905
Target Start/End: Original strand, 20118778 - 20118849
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||   ||||  | |||| |||||||| || ||||||||||||| ||||||||    
T  20118778 taagagaaatgatatttgaacaaccattttataacaacttttgcaataactttctctcttatattcacatta 20118849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 834 - 905
Target Start/End: Original strand, 40609607 - 40609678
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||| ||||||||||||  ||||| ||| || |||||  |||| ||||||||| ||||||||||||    
T  40609607 taagagaaatcatatttgaacatccatttaatgataacttttgtgacaactttctctctcatactcacatta 40609678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 8455859 - 8455928
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||| |||||| |||  ||||| ||||||| ||||| ||||| ||||||||| ||||||||||||    
T  8455859 aagagaaatgttatttgtacaactattttgtgacaacttttg-aacaactttctctctaatactcacatta 8455928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 836 - 898
Target Start/End: Original strand, 21172279 - 21172341
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatact 898  Q
    ||||||||||||||| || ||  |||| ||||||||||||   ||||||||||||||||||||    
T  21172279 agagaaatgatatttaaatatccattttgtgacaattttttttacaattttctctcttatact 21172341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 867 - 905
Target Start/End: Original strand, 48335584 - 48335622
Alignment:
Q  867 acaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  48335584 acaatttttgcaacaattttctctctcatattcacatta 48335622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 54000696 - 54000766
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||   | ||  |||||||||||  ||||| ||||||||| ||||||||||||    
T  54000696 aagagaaatgatatttgaacaaccactttttgacaatttttataacaactttctctctcatactcacatta 54000766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 838 - 903
Target Start/End: Original strand, 2401611 - 2401676
Alignment:
Q  838 agaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    |||||||||||||||||||  |||| ||||||| |||||  |||| ||| ||||| ||||||||||    
T  2401611 agaaatgatatttgaacatccattttgtgacaacttttgtgacaactttatctctcatactcacat 2401676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 834 - 905
Target Start/End: Original strand, 9162063 - 9162133
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaa-tttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||| ||| | |||| ||||||| ||||||  |||||||||||||| |||||| |||||    
T  9162063 taagagaaatgatatttgtacaatcattttgtgacaactttttg--acaattttctctctaatactcgcatta 9162133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 837 - 898
Target Start/End: Original strand, 14443198 - 14443259
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatact 898  Q
    ||||||||||||||||||| | ||||  |||||| |||||  |||||||||||||| |||||    
T  14443198 gagaaatgatatttgaacaatcattttttgacaacttttgtgacaattttctctctcatact 14443259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 834 - 903
Target Start/End: Original strand, 24235317 - 24235385
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    |||||||||||||||||| ||| | | || |||||||||||||  |||| ||||||||| ||||||||||    
T  24235317 taagagaaatgatatttgtacaatcaatttgtgacaatttttg-tacaactttctctctcatactcacat 24235385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 837 - 870
Target Start/End: Complemental strand, 39312675 - 39312642
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaa 870  Q
    |||||||||||||||||||| |||||||||||||    
T  39312675 gagaaatgatatttgaacatctatttagtgacaa 39312642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 40348793 - 40348861
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||| | ||||  | | ||||||||  |||||||||||||| ||||||||||||    
T  40348793 agagaaatgatatttgaacaatcatttttt-ataatttttgtgacaattttctctctcatactcacatta 40348861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 834 - 903
Target Start/End: Original strand, 51255743 - 51255812
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    ||||||||||||||||||||||   ||||  |||||| |||||  |||| ||||||||| ||||||||||    
T  51255743 taagagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttctctctcatactcacat 51255812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 2e-24; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 835 - 901
Target Start/End: Complemental strand, 29684685 - 29684619
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcac 901  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  29684685 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaactttctctctcatactcac 29684619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 18176939 - 18177008
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  18176939 agagaaatgatatttgaacatctatttagtgacaacttttgcaacaactttctctctcatactcacatta 18177008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 35589459 - 35589390
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||  |||| ||||||| ||||||||||||||||||||| ||||||||||||    
T  35589459 agagaaatgatatttgaacatccattttgtgacaacttttgcaacaattttctctctcatactcacatta 35589390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 838 - 905
Target Start/End: Complemental strand, 13347885 - 13347818
Alignment:
Q  838 agaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||  |||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  13347885 agaaatgatatttgaacatccattttgtgacaatttttgcaacaactttctctctcatactcacatta 13347818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 670540 - 670470
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||  |||||||||||| ||||| ||||| |||||| |||||||||||||||    
T  670540 aagagaaatgatatttgaacatccatttagtgacaacttttgtaacaactttctcgcttatactcacatta 670470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 838 - 903
Target Start/End: Original strand, 433851 - 433916
Alignment:
Q  838 agaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    |||||||||||||||||||| ||| ||||| |||||||||||||| ||||||||| ||||||||||    
T  433851 agaaatgatatttgaacattcattaagtgataatttttgcaacaactttctctctcatactcacat 433916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 4952551 - 4952483
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||| | | ||| ||||||||    
T  4952551 gagaaatgatatttgaacatttatttagtgataatttttgcaacaactttctatttcatattcacatta 4952483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 29051724 - 29051656
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  |||||||||||| ||||||||||||||||||| | ||||| ||||||    
T  29051724 gagaaatgatatttgaacatccatttagtgacaacttttgcaacaattttctctttcatacttacatta 29051656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 36802895 - 36802964
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||  |||| ||||||| |||||| |||| ||||||||| ||||||||||||    
T  36802895 agagaaatgatatttgaacatccattttgtgacaacttttgctacaactttctctctcatactcacatta 36802964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 37257449 - 37257518
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctctta-tactcacatta 905  Q
    ||||||||||||||||||||  |||||||||||| ||||||||||| ||||||||| | |||||||||||    
T  37257449 gagaaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctctcattactcacatta 37257518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 833 - 905
Target Start/End: Original strand, 2220989 - 2221061
Alignment:
Q  833 ttaagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||| |||||||||||| ||||| |||||||||||||  | || ||||||||| ||||||||||||    
T  2220989 ttaagagaaataatatttgaacatctattttgtgacaatttttgtgataactttctctctcatactcacatta 2221061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 18723594 - 18723662
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  |||| |||||||||||||  |||| ||||||||| ||||||||||||    
T  18723594 gagaaatgatatttgaacatccattttgtgacaatttttgttacaactttctctctcatactcacatta 18723662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 25881544 - 25881612
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||| ||||| | |||||||||||  |||| ||||||||| ||||||||||||    
T  25881544 gagaaatgatatttgaacatctattttgcgacaatttttgtgacaactttctctctcatactcacatta 25881612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 39449265 - 39449335
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||| ||  |||| ||||||| ||||||||||| ||||||||| ||||||| ||||    
T  39449265 aagagaaatgatatttgaatatccattttgtgacaacttttgcaacaactttctctctcatactcagatta 39449335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 837 - 902
Target Start/End: Complemental strand, 44712060 - 44711995
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcaca 902  Q
    ||||||||||||||||||||  |||| |||||||||||||| |||| ||||||| | |||||||||    
T  44712060 gagaaatgatatttgaacatccattttgtgacaatttttgctacaactttctctttcatactcaca 44711995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 8427552 - 8427620
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||| |||||  ||||||||||||  |||| ||||||||| ||||| ||||||    
T  8427552 gagaaatgatatttgaacatctattttttgacaatttttgtgacaactttctctctcatacttacatta 8427620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 12889903 - 12889835
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||| |||||||  |||| ||||||| |||||| |||| ||||||||| ||||||||||||    
T  12889903 gagaaatgatatatgaacatccattttgtgacaacttttgctacaactttctctctcatactcacatta 12889835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 28245728 - 28245796
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||| ||||| | ||||| |||||  |||| ||||||||| ||||||||||||    
T  28245728 gagaaatgatatttgaacatctattttgcgacaacttttgtgacaactttctctctcatactcacatta 28245796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 34431898 - 34431830
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||| |||| || ||||| || ||||||||||  |||| ||||||||||||||||||||||    
T  34431898 gagaaatgatatctgaatatatattttgtaacaatttttgtgacaactttctctcttatactcacatta 34431830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 834 - 905
Target Start/End: Complemental strand, 4299600 - 4299529
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||| |||||||||||||||||| |||| ||||||| |||| | |||| ||||||||| |||||| |||||    
T  4299600 taagataaatgatatttgaacattcattttgtgacaactttttctacaactttctctctcatactcgcatta 4299529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 838 - 957
Target Start/End: Complemental strand, 4758708 - 4758590
Alignment:
Q  838 agaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacattannnnnnnacttatctctctattgttatgaatt 937  Q
    |||||||||||||||||||  ||||||||| || ||||||||||| ||||||| | ||| ||||||||         |||||||||||||| |||| |||    
T  4758708 agaaatgatatttgaacatc-atttagtgataacttttgcaacaactttctctttcatattcacattattttttattttatctctctattgctatg-att 4758611  T
Q  938 tccgtgccaata-cacttttt 957  Q
    |||||||||||| ||||||||    
T  4758610 tccgtgccaatatcacttttt 4758590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 838 - 905
Target Start/End: Original strand, 26206848 - 26206915
Alignment:
Q  838 agaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||| |||||  ||||||||||||  | || ||||||||| ||||||||||||    
T  26206848 agaaatgatatttgaacatctattttatgacaatttttgttataactttctctctcatactcacatta 26206915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 837 - 903
Target Start/End: Original strand, 6895895 - 6895961
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    ||||||||||||||||| ||  ||||  ||||||||||||  |||| ||||||||||||||||||||    
T  6895895 gagaaatgatatttgaatatccatttgttgacaatttttgtgacaactttctctcttatactcacat 6895961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 839 - 905
Target Start/End: Complemental strand, 11167588 - 11167522
Alignment:
Q  839 gaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||||| |||| || |||||   ||||||||||| ||||| ||||||||    
T  11167588 gaaatgatatttgaacatttattttgtgataacttttgtgtcaattttctcttttatattcacatta 11167522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 28679314 - 28679384
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||| ||||||||||||  |||| ||||||| |||||| |||| ||||||||| |||| |||||||    
T  28679314 aagagaaataatatttgaacatccatttggtgacaacttttgcgacaactttctctctcatacacacatta 28679384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 833 - 875
Target Start/End: Complemental strand, 38257740 - 38257698
Alignment:
Q  833 ttaagagaaatgatatttgaacatttatttagtgacaattttt 875  Q
    |||||||||||||||||| ||||||||||| ||||||||||||    
T  38257740 ttaagagaaatgatatttaaacatttattttgtgacaattttt 38257698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 836 - 882
Target Start/End: Complemental strand, 42224015 - 42223969
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaa 882  Q
    |||||||||||||||||||||  ||||||||| ||||||||||||||    
T  42224015 agagaaatgatatttgaacatccatttagtgataatttttgcaacaa 42223969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 838 - 903
Target Start/End: Original strand, 4384056 - 4384120
Alignment:
Q  838 agaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    ||||||||||||||||||| ||||| || ||||||||||  |||| ||||||||| ||||||||||    
T  4384056 agaaatgatatttgaacatctattttgt-acaatttttgtgacaactttctctctcatactcacat 4384120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 840 - 905
Target Start/End: Complemental strand, 26738948 - 26738883
Alignment:
Q  840 aaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||| |||||||||| | |||||||||||| ||||||||||| ||||| ||| ||||| ||||||    
T  26738948 aaatgctatttgaacaatcatttagtgacaacttttgcaacaactttctttctcatacttacatta 26738883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 6999139 - 6999071
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  ||||  |||||| |||||  |||| ||||||||| ||||||||||||    
T  6999139 gagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacatta 6999071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 836 - 904
Target Start/End: Original strand, 18510674 - 18510742
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatt 904  Q
    ||||||||||||||||||||  |||||  |||||| ||||||||||| |||| ||||  ||||||||||    
T  18510674 agagaaatgatatttgaacaactattttttgacaacttttgcaacaactttccctctcttactcacatt 18510742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 833 - 905
Target Start/End: Complemental strand, 22526069 - 22525997
Alignment:
Q  833 ttaagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||| |||||||||||||||||  ||||  ||||||||||||  |||| ||||||| ||||| ||||||||    
T  22526069 ttaagaaaaatgatatttgaacatccattttttgacaatttttgtgacaactttctcttttatattcacatta 22525997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 835 - 899
Target Start/End: Original strand, 44254597 - 44254661
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactc 899  Q
    ||||||||||||||||||||||| |||  ||||||| |||||  |||| ||||||||| ||||||    
T  44254597 aagagaaatgatatttgaacattcattctgtgacaacttttgttacaactttctctctcatactc 44254661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 832 - 903
Target Start/End: Original strand, 5031918 - 5031989
Alignment:
Q  832 attaagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    |||||||||||||||||||| |||   |||| || |||| |||||| |||| ||||||||| ||||||||||    
T  5031918 attaagagaaatgatatttgtacaaccattttgtaacaacttttgcgacaactttctctctcatactcacat 5031989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 835 - 890
Target Start/End: Complemental strand, 5200298 - 5200243
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctct 890  Q
    |||||||| |||||||||||||  ||||||| ||||||||||  ||||||||||||    
T  5200298 aagagaaaggatatttgaacatccatttagtaacaatttttgtgacaattttctct 5200243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 835 - 874
Target Start/End: Original strand, 10711734 - 10711773
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttt 874  Q
    |||||||||||||||||||||| ||||| |||||||||||    
T  10711734 aagagaaatgatatttgaacatctattttgtgacaatttt 10711773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 835 - 902
Target Start/End: Original strand, 30977887 - 30977954
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcaca 902  Q
    ||||||||||||||||||||||  |||| ||||||| ||||   |||| ||||||||| |||||||||    
T  30977887 aagagaaatgatatttgaacatccattttgtgacaacttttatgacaactttctctctcatactcaca 30977954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 836 - 903
Target Start/End: Complemental strand, 39449189 - 39449122
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    |||||||||||||||||||||  |||| ||||||| |||||  |||| ||||||| | ||||||||||    
T  39449189 agagaaatgatatttgaacatccattttgtgacaacttttgttacaactttctctttcatactcacat 39449122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 2841832 - 2841902
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||| |||  |||| ||||||| |||||  |||| ||||| ||| ||||||||||||    
T  2841832 aagagaaatgatatttgatcatccattttgtgacaacttttgttacaactttctttctcatactcacatta 2841902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 835 - 892
Target Start/End: Original strand, 7552552 - 7552610
Alignment:
Q  835 aagagaaatgatatttgaacattta-tttagtgacaatttttgcaacaattttctctct 892  Q
    ||||||||||||||||||||||| | |||| |||||| ||||| ||||| |||||||||    
T  7552552 aagagaaatgatatttgaacattcattttaatgacaacttttgtaacaactttctctct 7552610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 9634509 - 9634439
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||  ||||  ||| ||||||||  |||| ||| ||||| ||||||||||||    
T  9634509 aagagaaatgatatttgaacatccattttatgataatttttgtgacaactttttctctcatactcacatta 9634439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 867 - 901
Target Start/End: Original strand, 13265995 - 13266029
Alignment:
Q  867 acaatttttgcaacaattttctctcttatactcac 901  Q
    |||||||||||||||||||||||||| ||||||||    
T  13265995 acaatttttgcaacaattttctctctcatactcac 13266029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 839 - 905
Target Start/End: Complemental strand, 14233788 - 14233722
Alignment:
Q  839 gaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||  |||| ||||||| |||||  |||| ||||||||| ||||||| ||||    
T  14233788 gaaatgatatttgaacatccattttgtgacaacttttgtgacaaatttctctctcatactcatatta 14233722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 837 - 903
Target Start/End: Complemental strand, 18876993 - 18876927
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    |||||||||||||||||||| ||||| || | ||||||||  |||| ||||||||| ||| ||||||    
T  18876993 gagaaatgatatttgaacatctatttggtaataatttttgtgacaactttctctctcatattcacat 18876927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 30546442 - 30546372
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||| ||  ||||| ||| ||||||||  |||||||||||||| ||| ||| ||||    
T  30546442 aagagaaatgatatttgaatatccatttaatgataatttttgtgacaattttctctctcatattcatatta 30546372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 839 - 905
Target Start/End: Original strand, 35705496 - 35705562
Alignment:
Q  839 gaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||| |||||||||||| ||||| ||||||| ||||   | |||||||||||| ||||||||||||    
T  35705496 gaaattatatttgaacatctatttggtgacaacttttatgataattttctctctcatactcacatta 35705562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 36517194 - 36517264
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||| |||||  ||| ||||||||  |||| ||||||| ||||| ||| ||||    
T  36517194 aagagaaatgatatttgaacatctattttatgataatttttgtgacaactttctcttttatattcatatta 36517264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 834 - 904
Target Start/End: Original strand, 38821363 - 38821433
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatt 904  Q
    ||||||||||||||||||||||   ||||  |||||| |||||  |||||||||| ||| |||||||||||    
T  38821363 taagagaaatgatatttgaacaaccattttatgacaacttttgtgacaattttctttctcatactcacatt 38821433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 39213843 - 39213773
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||| |||| |||||| | |||| |||| ||||||| ||||||||||| ||| ||||| ||||||||||||    
T  39213843 aagataaattatatttaagcattcattttgtgacaacttttgcaacaactttatctctcatactcacatta 39213773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 835 - 876
Target Start/End: Complemental strand, 4062032 - 4061991
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttg 876  Q
    ||||||||||||||||||||||  ||||| ||||||||||||    
T  4062032 aagagaaatgatatttgaacatccatttaatgacaatttttg 4061991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 835 - 900
Target Start/End: Original strand, 7648390 - 7648454
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactca 900  Q
    ||||||||||||||||||||||  |||| |||||||||||||  |||| ||| ||||| |||||||    
T  7648390 aagagaaatgatatttgaacatccattt-gtgacaatttttgtgacaactttttctctcatactca 7648454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 840 - 905
Target Start/End: Original strand, 9194432 - 9194497
Alignment:
Q  840 aaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||  |||| ||||||| ||||   |||| ||||||||| ||||||||||||    
T  9194432 aaatgatatttgaacatccattttgtgacaacttttatgacaactttctctctcatactcacatta 9194497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 12498708 - 12498639
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||  |||| || ||||||||||  |||| ||| ||||| ||||||| ||||    
T  12498708 agagaaatgatatttgaacatccatttggtaacaatttttgtgacaactttttctctcatactcatatta 12498639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 834 - 903
Target Start/End: Complemental strand, 14954673 - 14954605
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    |||||||||||||||||| ||||  |||| ||||||| ||||| ||||| ||||||||| ||| ||||||    
T  14954673 taagagaaatgatatttgtacatacattttgtgacaacttttg-aacaactttctctctcatattcacat 14954605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 864 - 905
Target Start/End: Original strand, 16677699 - 16677740
Alignment:
Q  864 gtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||| ||||||||||||||||||| ||||| ||||||||    
T  16677699 gtgacaacttttgcaacaattttctcttttatattcacatta 16677740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 840 - 905
Target Start/End: Original strand, 37077792 - 37077857
Alignment:
Q  840 aaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||  |||||  ||| |||||||| ||||||||| ||| | ||||||||||||    
T  37077792 aaatgatatttgaacaactattttttgataatttttgtaacaattttatctttcatactcacatta 37077857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 835 - 904
Target Start/End: Original strand, 40504222 - 40504291
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatt 904  Q
    |||||||||||||||||||||   ||||  |||||| | |||  |||| |||||||||||||||||||||    
T  40504222 aagagaaatgatatttgaacaaccattttatgacaactgttgtgacaaatttctctcttatactcacatt 40504291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 1e-22; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 835 - 957
Target Start/End: Complemental strand, 39671171 - 39671048
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctctt-atactcacattannnnnnnacttatctctctattgttatg 933  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||| ||||||||||||         |||||||||||||||||||    
T  39671171 aagagaaatgatatttgaacatctatttagtgacaacttttgcaacaactttctctcttcatactcacattactttttactttatctctctattgttatg 39671072  T
Q  934 aatttccgtgccaata-cacttttt 957  Q
     ||||||||| ||||| ||||||||    
T  39671071 -atttccgtgtcaatatcacttttt 39671048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 30909028 - 30909097
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  30909028 agagaaatgatatttgaacattcatttagtgacaacttttgcaacaactttctctcttatattcacatta 30909097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 44677556 - 44677487
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||  |||||||||||| ||||||||||||||||||||| ||||||||||||    
T  44677556 agagaaatgatatttgaacatccatttagtgacaacttttgcaacaattttctctctcatactcacatta 44677487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 10207046 - 10206976
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  10207046 aagagaaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcacatta 10206976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 8821629 - 8821698
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||| ||||||||||||    
T  8821629 agagaaatgatatttgaacatctatttagtgacaacttttgtaacaactttctctctcatactcacatta 8821698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 49363322 - 49363254
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  |||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  49363322 gagaaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcacatta 49363254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 26996314 - 26996384
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||| ||||||| |||| ||||| ||||| ||||||||| ||||||||||||    
T  26996314 aagagaaatgatatttgaacattcatttagtaacaacttttgtaacaactttctctctcatactcacatta 26996384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 32767674 - 32767744
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||| ||  |||||||||||| |||||||| |||||||||||| ||||||||||||    
T  32767674 aagagaaatgatatttgaatatccatttagtgacaacttttgcaataattttctctctcatactcacatta 32767744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 37508571 - 37508501
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||  ||||||||| || ||||||||||| ||||||||| ||||||||||||    
T  37508571 aagagaaatgatatttgaacatccatttagtgataacttttgcaacaactttctctctcatactcacatta 37508501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 43904972 - 43905041
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||  ||||||||| |||||||| ||||| ||||||||| ||||||||||||    
T  43904972 agagaaatgatatttgaacatccatttagtgataatttttgtaacaactttctctctcatactcacatta 43905041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 50207042 - 50206973
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||  |||| ||||||| ||||||||||| ||||||||| ||||||||||||    
T  50207042 agagaaatgatatttgaacatccattttgtgacaacttttgcaacaactttctctctcatactcacatta 50206973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 24483034 - 24482966
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  |||| ||||||| ||||||||||| ||||||||| ||||||||||||    
T  24483034 gagaaatgatatttgaacatccattttgtgacaacttttgcaacaactttctctctcatactcacatta 24482966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 33375860 - 33375928
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||| |||||  |||||||||||| |||| |||||||||||||||| ||||||||||||    
T  33375860 gagaaatgatatttcaacatccatttagtgacaacttttacaacaattttctctctcatactcacatta 33375928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 46982973 - 46982906
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| ||||||| ||||    
T  46982973 gagaaatgatatttgaacatctatttagtgacaa-ttttgcaacaaatttctctctcatactcatatta 46982906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 838 - 905
Target Start/End: Complemental strand, 29634142 - 29634075
Alignment:
Q  838 agaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||  ||||| ||| || ||||||||||||||||||||||||| ||| ||||    
T  29634142 agaaatgatatttgaacatccatttaatgataacttttgcaacaattttctctcttatattcatatta 29634075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 838 - 905
Target Start/End: Complemental strand, 39697292 - 39697225
Alignment:
Q  838 agaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||  |||| |||| |||||||| ||||| ||||||||| ||||||||||||    
T  39697292 agaaatgatatttgaacatccattttgtgataatttttgtaacaactttctctctcatactcacatta 39697225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 835 - 958
Target Start/End: Original strand, 49417573 - 49417696
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacattannnnnnnacttatctctctattgttatga 934  Q
    |||||||||||||||||||||| |||||  |||||| |||||  |||| ||||||||| ||||||||||||         |||||||||||||| ||||     
T  49417573 aagagaaatgatatttgaacatctattttatgacaacttttgtgacaactttctctctcatactcacattattttttattttatctctctattgctatg- 49417671  T
Q  935 atttccgtgccaatac-actttttc 958  Q
     ||||||||||||||| ||||||||    
T  49417672 gtttccgtgccaatactactttttc 49417696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 11633611 - 11633681
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||  ||||||  |||| ||||||||||| ||||||||| ||| ||||||||    
T  11633611 aagagaaatgatatttgaacatccatttagcaacaacttttgcaacaactttctctctcatattcacatta 11633681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 46019460 - 46019530
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||| ||||| | ||||| |||||  |||| ||||||||| ||||||||||||    
T  46019460 aagagaaatgatatttgaacatctattttgcgacaacttttgtgacaactttctctctcatactcacatta 46019530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 54773827 - 54773757
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||  |||||||||||| ||||  ||||| ||||||||| ||||||| ||||    
T  54773827 aagagaaatgatatttgaacatccatttagtgacaacttttataacaactttctctctcatactcatatta 54773757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 42683826 - 42683895
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||| |||| |||| ||||||||  |||||||||||| | |||| |||||||    
T  42683826 agagaaatgatatttgaacattcattttgtgataatttttgttacaattttctctttcatacccacatta 42683895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 835 - 892
Target Start/End: Complemental strand, 54694186 - 54694129
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctct 892  Q
    ||||||||||||||||||| || ||||| |||||||||||||| |||| |||||||||    
T  54694186 aagagaaatgatatttgaatatctattttgtgacaatttttgctacaactttctctct 54694129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 840 - 905
Target Start/End: Original strand, 55013006 - 55013071
Alignment:
Q  840 aaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||| ||||||||||||  ||||||||| || ||||||||||| ||||||||||||| ||||||||    
T  55013006 aaattatatttgaacatccatttagtgataacttttgcaacaactttctctcttatattcacatta 55013071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 22371191 - 22371259
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  ||||||||| || ||||| || |||||||||||| ||||| ||||||    
T  22371191 gagaaatgatatttgaacatccatttagtgataacttttgtaataattttctctctcatacttacatta 22371259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 833 - 905
Target Start/End: Original strand, 48405406 - 48405478
Alignment:
Q  833 ttaagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||| |||   |||| ||||||| ||||| ||||| ||||||||| ||||||||||||    
T  48405406 ttaagagaaatgatatttgtacaaccattttgtgacaacttttgtaacaactttctctctcatactcacatta 48405478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 838 - 905
Target Start/End: Original strand, 20080074 - 20080141
Alignment:
Q  838 agaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||| |||||||||||  ||||| ||||||||||||  |||| ||||||||| ||||||||||||    
T  20080074 agaaatggtatttgaacatccatttaatgacaatttttgtgacaactttctctctcatactcacatta 20080141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 837 - 904
Target Start/End: Complemental strand, 25188536 - 25188469
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatt 904  Q
    |||||||||||||||||||  |||||  |||||| ||||||||||| |||||||||  ||||||||||    
T  25188536 gagaaatgatatttgaacaactattttttgacaacttttgcaacaactttctctctcttactcacatt 25188469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 834 - 905
Target Start/End: Complemental strand, 25641644 - 25641574
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||| ||||||  |||||| |||||| |||| ||| ||||| ||||||||||||    
T  25641644 taagagaaatgatatttgaacaattattt-ttgacaacttttgctacaactttgtctctcatactcacatta 25641574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 837 - 903
Target Start/End: Complemental strand, 50638420 - 50638356
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    |||||||||||||||||||| ||||| |||||||||||||  |||| ||||||||  ||||||||||    
T  50638420 gagaaatgatatttgaacatctatttggtgacaatttttgtgacaactttctctc--atactcacat 50638356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 839 - 905
Target Start/End: Original strand, 18741119 - 18741185
Alignment:
Q  839 gaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||  ||||  ||| |||||||| ||||||||||||| | ||||||||||||    
T  18741119 gaaatgatatttgaacatcaattttttgataatttttgtaacaattttctctttcatactcacatta 18741185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 837 - 903
Target Start/End: Complemental strand, 37927276 - 37927210
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    ||||||||||||||||||||  |||| ||||||| |||||  |||| ||||||||| ||||||||||    
T  37927276 gagaaatgatatttgaacatccatttggtgacaacttttgtgacaactttctctctcatactcacat 37927210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 8846490 - 8846559
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||| ||||   | |||| |||||  |||||||||||||| ||||||||||||    
T  8846490 agagaaatgatatttgaacatctattcgataacaacttttgtgacaattttctctctcatactcacatta 8846559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 24095478 - 24095409
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||  ||||  ||| ||||||||  |||| ||||||||| ||||||||||||    
T  24095478 agagaaatgatatttgaacatccattttatgataatttttgtgacaactttctctctcatactcacatta 24095409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 28419286 - 28419217
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||| |||||| | |||| ||||||||||| ||||| | | ||||| ||||||    
T  28419286 agagaaatgatatttgaacatctatttattaacaacttttgcaacaactttctttttcatacttacatta 28419217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 840 - 905
Target Start/End: Original strand, 46253625 - 46253690
Alignment:
Q  840 aaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||  ||||   ||||| ||||||||||||||| ||||| ||||||||||||    
T  46253625 aaatgatatttgaacatccattttacgacaacttttgcaacaattttttctctcatactcacatta 46253690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 3347193 - 3347125
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  |||| |||| || |||||| |||| ||||||||| ||| ||||||||    
T  3347193 gagaaatgatatttgaacatccattttgtgataacttttgctacaactttctctctcatattcacatta 3347125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 836 - 876
Target Start/End: Original strand, 37410883 - 37410923
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttg 876  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  37410883 agagaaatgatatttgaacatttattttttgacaatttttg 37410923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 51343408 - 51343476
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||| |||||||||||||| |||||  |||||| |||||  |||||||||||||| ||||| ||||||    
T  51343408 gagaagtgatatttgaacatctatttgatgacaacttttgtgacaattttctctctcatacttacatta 51343476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 55399999 - 55400067
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  ||||  |||||| |||||  |||| ||||||||| ||||||||||||    
T  55399999 gagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacatta 55400067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 835 - 870
Target Start/End: Complemental strand, 3281777 - 3281742
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaa 870  Q
    |||||||||||||||||||||||||||| |||||||    
T  3281777 aagagaaatgatatttgaacatttattttgtgacaa 3281742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 837 - 903
Target Start/End: Complemental strand, 4494308 - 4494242
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    ||||||||||||||||| |  |||||  ||| ||||||||  |||| ||||||||||||||||||||    
T  4494308 gagaaatgatatttgaataactattttttgataatttttgtgacaactttctctcttatactcacat 4494242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 7867784 - 7867715
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||| |||  ||||| ||||||| ||||  ||||||||||| ||| ||||||||||||    
T  7867784 aagagaaatgatatttgtacaactattttgtgacaactttt-aaacaattttctttctcatactcacatta 7867715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 21196122 - 21196192
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||  |||| ||||||| || ||  |||| ||||||||| ||||| ||||||    
T  21196122 aagagaaatgatatttgaacatccattttgtgacaacttctgtgacaactttctctctcatacttacatta 21196192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 837 - 875
Target Start/End: Complemental strand, 30568031 - 30567993
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaattttt 875  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  30568031 gagaaatgatatttgaacatttattttgtgacaactttt 30567993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 50559285 - 50559215
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||| |||  |||||  |||||| |||||  |||||||||||||| ||||| ||||||    
T  50559285 aagagaaatgatatttgtacaactattttttgacaacttttgtgacaattttctctctcatacttacatta 50559215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 837 - 875
Target Start/End: Complemental strand, 54274251 - 54274213
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaattttt 875  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  54274251 gagaaatgatatttgaacatttattttgtgataattttt 54274213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 836 - 901
Target Start/End: Original strand, 41717262 - 41717326
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcac 901  Q
    |||||||||||||||| ||| |||||||||||||| ||||  ||||| ||||| ||| ||||||||    
T  41717262 agagaaatgatatttgtacaattatttagtgacaactttt-aaacaactttctatctcatactcac 41717326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 837 - 890
Target Start/End: Original strand, 51873393 - 51873446
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctct 890  Q
    |||||||||||||||||||  ||||| ||||||||||||   ||||||||||||    
T  51873393 gagaaatgatatttgaacaactattttgtgacaatttttatgacaattttctct 51873446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 4e-22; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 16980295 - 16980365
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||||||||||||    
T  16980295 aagagaaatgatatttgaacattcattttgtgacaacttttgcaacaactttctctcttatactcacatta 16980365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 832 - 905
Target Start/End: Original strand, 32815163 - 32815236
Alignment:
Q  832 attaagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||| ||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  32815163 attaggagaaattatatttgaacatctatttagtgacaatttttgcaacaattttttctctcatactcacatta 32815236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 840 - 950
Target Start/End: Complemental strand, 37808832 - 37808723
Alignment:
Q  840 aaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacattannnnnnnacttatctctctattgttatgaatttc 939  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||| ||||||         |||||||||||||||||||  ||||    
T  37808832 aaatgatatttgaacatccatttagtgacaatttttgcaacaattttctctctcatacttacattattttttactttatctctctattgttatg-ctttc 37808734  T
Q  940 cgtgccaatac 950  Q
    |||||||||||    
T  37808733 cgtgccaatac 37808723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 837 - 950
Target Start/End: Original strand, 39331985 - 39332097
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacattannnnnnnacttatctctctattgttatgaat 936  Q
    ||||||||||||||||||||  |||||||||||| ||||| ||||| ||||||||||||||||||||||         |||||||||||||| |||| ||    
T  39331985 gagaaatgatatttgaacatccatttagtgacaacttttgtaacaactttctctcttatactcacattactttttactttatctctctattgctatg-at 39332083  T
Q  937 ttccgtgccaatac 950  Q
    ||||||||||||||    
T  39332084 ttccgtgccaatac 39332097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 833 - 900
Target Start/End: Complemental strand, 46773717 - 46773650
Alignment:
Q  833 ttaagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactca 900  Q
    ||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||| |||||||    
T  46773717 ttaagagaaatgatatttgaacatccattcagtgacaatttttgcaacaattttctctctcatactca 46773650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 13162917 - 13162987
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| ||||||| ||||    
T  13162917 aagagaaatgatatttgaacatctatttagtgacaacttttgcaacaactttctctctcatactcatatta 13162987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 21822672 - 21822602
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| |||||| |||||    
T  21822672 aagagaaatgatatttgaacatctattttgtgacaatttttgcaacaatgttctctctcatactcgcatta 21822602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 834 - 905
Target Start/End: Original strand, 41025758 - 41025829
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||| | ||| ||||||||    
T  41025758 taagagaaatgatatttgaacatctatttagtgataatttttgcaataattttctctttcatagtcacatta 41025829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 39231801 - 39231731
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||  | |||||||||| ||||||||||| ||||||||| ||||||||||||    
T  39231801 aagagaaatgatatttgaacatccagttagtgacaacttttgcaacaactttctctctcatactcacatta 39231731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 28036743 - 28036812
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||| ||||||||||||| || | ||||||| ||||||||||| ||||||||||||||||||||||    
T  28036743 agagaaataatatttgaacattcatgttgtgacaacttttgcaacaactttctctcttatactcacatta 28036812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 833 - 905
Target Start/End: Original strand, 13729722 - 13729794
Alignment:
Q  833 ttaagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||||  |||| ||||||| ||||||||||| ||||| ||| ||||||||||||    
T  13729722 ttaagagaaatgatatttgaacatccattttgtgacaacttttgcaacaactttctttctcatactcacatta 13729794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 837 - 950
Target Start/End: Complemental strand, 29163047 - 29162935
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacattannnnnnnacttatctctctattgttatgaat 936  Q
    ||||||||||||||||||||  ||||||| |||| |||| |||||| ||||||||| ||||||||||||         |||||||||||||||||||  |    
T  29163047 gagaaatgatatttgaacatccatttagtaacaacttttacaacaactttctctctcatactcacattactttttactttatctctctattgttatg-gt 29162949  T
Q  937 ttccgtgccaatac 950  Q
    ||||||||||||||    
T  29162948 ttccgtgccaatac 29162935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 43573614 - 43573546
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||| ||||| ||||||| ||||||||||| ||||||||| ||| ||||||||    
T  43573614 gagaaatgatatttgaacatctattttgtgacaacttttgcaacaactttctctctcatattcacatta 43573546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 838 - 905
Target Start/End: Complemental strand, 19786149 - 19786082
Alignment:
Q  838 agaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||  |||||||||||| ||||||||||| ||||||||  ||||||||||||    
T  19786149 agaaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctcacatactcacatta 19786082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 838 - 905
Target Start/End: Complemental strand, 27163729 - 27163662
Alignment:
Q  838 agaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||| ||||||||||||| ||||| ||| || ||||||||||| ||||||||||||||||||||||    
T  27163729 agaaattatatttgaacattcatttaatgataacttttgcaacaactttctctcttatactcacatta 27163662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 11564891 - 11564961
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||| ||||||||||||||||||||||| ||||||| |||||| | || ||||||||| ||||||||||||    
T  11564891 aagataaatgatatttgaacatttattttgtgacaacttttgctataactttctctctcatactcacatta 11564961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 41402505 - 41402575
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||| ||  |||||||||||| ||||||||||| ||||||||| ||||||| ||||    
T  41402505 aagagaaatgatatttgaatatccatttagtgacaacttttgcaacaactttctctctcatactcatatta 41402575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 33180782 - 33180713
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||| |||| ||||||| ||||   |||||||||||||| ||||||||||||    
T  33180782 agagaaatgatatttgaacattcattttgtgacaacttttatgacaattttctctctcatactcacatta 33180713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 21023188 - 21023120
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||| |||||||||||| |||||| | |||||||||| | ||| ||||||||    
T  21023188 gagaaatgatatttgaacattcatttagtgacaacttttgcgataattttctctttcatattcacatta 21023120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 838 - 905
Target Start/End: Complemental strand, 3343400 - 3343333
Alignment:
Q  838 agaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||| ||||  ||||||||||||  |||||||||||||| ||| ||||||||    
T  3343400 agaaatgatatttgaacattcattttatgacaatttttgtgacaattttctctctcatattcacatta 3343333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 835 - 950
Target Start/End: Complemental strand, 13906530 - 13906416
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacattannnnnnnac-ttatctctctattgttatg 933  Q
    |||| |||||||||||||||||  ||| ||||||||  |||||||||| ||||||||||||||| ||||||       || |||||||||||||||||||    
T  13906530 aagaaaaatgatatttgaacatccatt-agtgacaacctttgcaacaactttctctcttatacttacattatttttttactttatctctctattgttatg 13906432  T
Q  934 aatttccgtgccaatac 950  Q
      |||||||||||||||    
T  13906431 -gtttccgtgccaatac 13906416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 838 - 905
Target Start/End: Original strand, 29002609 - 29002676
Alignment:
Q  838 agaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||| ||||| ||||||||||||| ||||||||||| |||||||||  || ||||||||    
T  29002609 agaaatgatatttaaacatctatttagtgacaacttttgcaacaactttctctctcgtaatcacatta 29002676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 838 - 905
Target Start/End: Complemental strand, 46812975 - 46812908
Alignment:
Q  838 agaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||| |||| ||||||| |||||| |||| ||||||||||||| | ||||||    
T  46812975 agaaatgatatttgaacattcattttgtgacaacttttgctacaactttctctcttatatttacatta 46812908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 44184632 - 44184562
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||| ||||| | ||||| |||||  |||| ||||||||| ||||||||||||    
T  44184632 aagagaaatgatatttgaacatctattttgcgacaacttttgtgacaactttctctctcatactcacatta 44184562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 10055703 - 10055635
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||| |||||| ||||| |||||||||||||   ||||||||| ||| ||||||||||||    
T  10055703 gagaaatgatattcgaacatctattttgtgacaatttttgtggcaattttctttctcatactcacatta 10055635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 31844675 - 31844608
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  |||| ||||||||||||   |||||||||||| ||||||||||||||    
T  31844675 gagaaatgatatttgaacatccattt-gtgacaatttttatgacaattttctcttttatactcacatta 31844608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 834 - 905
Target Start/End: Complemental strand, 38779819 - 38779747
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgac-aatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||||  ||| |||||| || ||||||||||| ||| ||||| ||||||||||||    
T  38779819 taagagaaatgatatttgaacatccattcagtgacaaacttttgcaacaactttttctctcatactcacatta 38779747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 834 - 905
Target Start/End: Original strand, 21559795 - 21559866
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||||  |||  ||||||| |||||| |||| ||| ||||| ||||||||||||    
T  21559795 taagagaaatgatatttgaacatccattctgtgacaacttttgctacaactttatctctcatactcacatta 21559866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 836 - 903
Target Start/End: Complemental strand, 37899285 - 37899218
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    |||||||||||||||||||||  |||| |||||||||||||  |||| ||||||||| ||||| ||||    
T  37899285 agagaaatgatatttgaacatccattttgtgacaatttttgtgacaactttctctctcatacttacat 37899218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 832 - 886
Target Start/End: Complemental strand, 12645987 - 12645933
Alignment:
Q  832 attaagagaaatgatatttgaacatttatttagtgacaatttttgcaacaatttt 886  Q
    |||| ||||||||||||||||| || ||||| |||| ||||||||||||||||||    
T  12645987 attatgagaaatgatatttgaatatctattttgtgataatttttgcaacaatttt 12645933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 840 - 905
Target Start/End: Original strand, 41458599 - 41458664
Alignment:
Q  840 aaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||| ||||| |||||  |||||||||||| | ||| ||||||||| ||||||||||||    
T  41458599 aaatgatattttaacatctattttatgacaatttttgtagcaactttctctctcatactcacatta 41458664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 833 - 905
Target Start/End: Original strand, 7990075 - 7990146
Alignment:
Q  833 ttaagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||| |||| |||||  ||| |||||||  |  |||||||||||||||||||||||||    
T  7990075 ttaagagaaatgatatttgtacatctattttatgataattttttgat-aattttctctcttatactcacatta 7990146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 34978296 - 34978364
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||| | | ||  ||||||||||||  |||| ||||||||| ||||||||||||    
T  34978296 gagaaatgatatttgaacaatcactttttgacaatttttgtgacaactttctctctcatactcacatta 34978364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 835 - 903
Target Start/End: Complemental strand, 43255640 - 43255573
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    ||||| ||||||||||| ||| |||||| |||||||||||||  |||||||||| ||| ||||||||||    
T  43255640 aagagtaatgatatttgtacaattattttgtgacaatttttg-tacaattttctttctcatactcacat 43255573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 836 - 903
Target Start/End: Complemental strand, 35452645 - 35452578
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    |||||||||||| ||||||||  |||| |||| ||||||||  |||| ||||||||| ||||||||||    
T  35452645 agagaaatgatacttgaacatccatttggtgataatttttgtgacaactttctctctcatactcacat 35452578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 836 - 903
Target Start/End: Original strand, 37899322 - 37899389
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    |||||||||||||||||||||  |||| ||||||| |||||  |||| ||| ||||| ||||||||||    
T  37899322 agagaaatgatatttgaacatccattttgtgacaacttttgtgacaactttatctctcatactcacat 37899389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 834 - 905
Target Start/End: Original strand, 39137150 - 39137220
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||||  |||| || |||| ||||   |||||||| ||||||||||||||||||    
T  39137150 taagagaaatgatatttgaacatccatttggt-acaacttttatgacaattttatctcttatactcacatta 39137220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 834 - 892
Target Start/End: Original strand, 30061278 - 30061336
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctct 892  Q
    ||||||||||||||||| ||||  |||||  ||||||||||||  ||||||||||||||    
T  30061278 taagagaaatgatattttaacaactattttttgacaatttttgtgacaattttctctct 30061336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 839 - 905
Target Start/End: Complemental strand, 35588960 - 35588894
Alignment:
Q  839 gaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||| || |||||  ||| ||||||||||| |||||| | ||||||| ||||||||    
T  35588960 gaaatgatatttgaatatctattttatgataatttttgcaataattttttatcttatattcacatta 35588894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 832 - 958
Target Start/End: Original strand, 39823804 - 39823930
Alignment:
Q  832 attaagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacattannnnnnnacttatctctctattgtta 931  Q
    |||| ||||||||||||||||||||| |||| |||| |||||||   |||| ||| ||||| | ||||||||||         |||||| ||||||||||    
T  39823804 attaggagaaatgatatttgaacattcatttggtgataatttttatgacaactttttctctcacactcacattattttttactttatctttctattgtta 39823903  T
Q  932 tgaatttccgtgccaatac-actttttc 958  Q
    | |||||||||| |||||| ||||||||    
T  39823904 t-aatttccgtgtcaatactactttttc 39823930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 41893913 - 41893983
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||  ||||  |||||| |||||  |||| ||||||| | ||||||||||||    
T  41893913 aagagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctttcatactcacatta 41893983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 834 - 903
Target Start/End: Complemental strand, 12007260 - 12007191
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    ||||||||||||||||||||||   ||||  |||||| |||||  |||| ||||||||| ||||||||||    
T  12007260 taagagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttctctctcatactcacat 12007191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 840 - 905
Target Start/End: Complemental strand, 24533011 - 24532946
Alignment:
Q  840 aaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||  |||||  ||| ||||||||  |||||||| ||||| ||||||||||||    
T  24533011 aaatgatatttgaacaactattttctgataatttttgtgacaattttttctctcatactcacatta 24532946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 26153646 - 26153712
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||| |||  |||||  |||||| |||||  |||||||||||||| ||||||||||||    
T  26153646 gagaaatgatatttgtacaactattttatgacaacttttg--acaattttctctctcatactcacatta 26153712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 47355982 - 47356051
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||| || ||||||||||  | |||| |||||  |||||||| |||||||||||| |||||    
T  47355982 agagaaatgatatctgtacatttatttcataacaaattttgtgacaattttatctcttatactctcatta 47356051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 835 - 904
Target Start/End: Original strand, 47448824 - 47448893
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatt 904  Q
    |||||||||||||||||||||   ||||  |||||| |||||  |||| ||||||||| |||||||||||    
T  47448824 aagagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttctctctcatactcacatt 47448893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 2e-21; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 8267892 - 8267823
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||  |||||||||||||||||||||||| ||||||||| ||||||||||||    
T  8267892 agagaaatgatatttgaacatccatttagtgacaatttttgcaacaactttctctctcatactcacatta 8267823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 21064297 - 21064229
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  21064297 gagaaatgatatttgaacattcatttagtgacaacttttgcaacaactttctctctcatactcacatta 21064229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 35099076 - 35099008
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  35099076 gagaaatgatatttgaacatctatttagtgacaacttttgcaacaactttctctctcatactcacatta 35099008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 834 - 905
Target Start/End: Complemental strand, 23126417 - 23126346
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||  ||||||||||||    
T  23126417 taagagaaatgatatttgaacatccatttagtgacaacttttgcaacaattttctctcccatactcacatta 23126346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 5042246 - 5042316
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||| ||| ||||| ||||||||||||    
T  5042246 aagagaaatgatatttgaacatccatttagtgacaatttttgcaacaactttatctctcatactcacatta 5042316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 834 - 905
Target Start/End: Original strand, 9977116 - 9977187
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||||||||  | ||||||||||||    
T  9977116 taagagaaatgatatttgaacatccatttagtgacaacttttgcaacaattttctcaatcatactcacatta 9977187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 8675506 - 8675436
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||  |||| |||| || ||||||||||||||||||||| ||||||||||||    
T  8675506 aagagaaatgatatttgaacatccattttgtgataacttttgcaacaattttctctctcatactcacatta 8675436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 832 - 898
Target Start/End: Complemental strand, 18511872 - 18511806
Alignment:
Q  832 attaagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatact 898  Q
    |||||||||||||||||||||||||| |||| |||| ||||||||| |||||||||||||| |||||    
T  18511872 attaagagaaatgatatttgaacattcattttgtgataatttttgctacaattttctctctcatact 18511806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 18842392 - 18842324
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  ||||||||| || ||||||||||| ||||||||| ||||||||||||    
T  18842392 gagaaatgatatttgaacatccatttagtgataacttttgcaacaactttctctctcatactcacatta 18842324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 834 - 905
Target Start/End: Complemental strand, 19840060 - 19839989
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||||| ||||  ||||||||||||  |||| ||||||||| ||||||||||||    
T  19840060 taagagaaatgatatttgaacattcattttatgacaatttttgtgacaactttctctctcatactcacatta 19839989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 837 - 903
Target Start/End: Complemental strand, 4431007 - 4430941
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    ||||||||||||||||||||  |||||||||||| ||||||||||| ||| ||||| ||||||||||    
T  4431007 gagaaatgatatttgaacatccatttagtgacaacttttgcaacaactttttctctcatactcacat 4430941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 32912036 - 32912106
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||| ||||  ||| ||||||||  |||||||||||||| ||||||||||||    
T  32912036 aagagaaatgatatttgaacattcattttatgataatttttgtgacaattttctctctcatactcacatta 32912106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 6292120 - 6292189
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||| || | |||| ||| ||||| |||| ||||||||||||||||||||||    
T  6292120 agagaaatgatatttgaacattcatcttgtgataatatttgctacaactttctctcttatactcacatta 6292189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 5821682 - 5821615
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||| |||||  |||||||||||||||||||||||||||| ||||| ||||| ||||||    
T  5821682 gagaaatgatatttaaacatc-atttagtgacaatttttgcaacaattttttctctcatacttacatta 5821615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 25871517 - 25871449
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  |||| |||||||||||||| | |||||||||||| || |||||||||    
T  25871517 gagaaatgatatttgaacatccattttgtgacaatttttgctataattttctctctcatgctcacatta 25871449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 43441738 - 43441806
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  |||| || |||| ||||||||||| ||||||||| ||||||||||||    
T  43441738 gagaaatgatatttgaacatccattttgtaacaacttttgcaacaactttctctctcatactcacatta 43441806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 835 - 898
Target Start/End: Original strand, 33620606 - 33620669
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatact 898  Q
    ||||||||||||||||||| ||  |||||||||||| ||||||||||||||| ||||| |||||    
T  33620606 aagagaaatgatatttgaatatccatttagtgacaacttttgcaacaattttttctctcatact 33620669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 835 - 958
Target Start/End: Original strand, 37700458 - 37700581
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacattannnnnnnacttatctctctattgttatga 934  Q
    ||||||||||||||||||||||  |||| ||||||||| |||  | || ||||||||| ||||||||||||        ||||||||||||||| ||||     
T  37700458 aagagaaatgatatttgaacatccatttggtgacaattattgtgataactttctctctcatactcacattattttttaccttatctctctattgctatg- 37700556  T
Q  935 atttccgtgccaatac-actttttc 958  Q
     ||||||||||||||| ||||||||    
T  37700557 gtttccgtgccaatactactttttc 37700581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 15267782 - 15267852
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||| |||||  |||||||||||| ||||||||||| ||||||||| ||| ||| ||||    
T  15267782 aagagaaatgatattttaacatccatttagtgacaacttttgcaacaactttctctctcatattcatatta 15267852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 38704269 - 38704200
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||  ||||  ||| |||||||||||||||||| ||| | ||||||||||||    
T  38704269 agagaaatgatatttgaacatccattttatgataatttttgcaacaattttttctatcatactcacatta 38704200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 840 - 905
Target Start/End: Complemental strand, 43196693 - 43196628
Alignment:
Q  840 aaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||| ||||||||||| |||||||||||||  |||| ||||| ||| ||||||||||||    
T  43196693 aaatgatatttaaacatttattttgtgacaatttttgttacaactttctttctcatactcacatta 43196628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 4771497 - 4771565
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||| ||||| ||||||| |||||| |||| |||||||   ||||||||||||    
T  4771497 gagaaatgatatttgaacatatattttgtgacaaattttgctacaactttctcttgcatactcacatta 4771565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 836 - 904
Target Start/End: Complemental strand, 42446363 - 42446295
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatt 904  Q
    ||||||||||||||||||||  |||||  |||||| ||||||||||| |||||||||  ||||||||||    
T  42446363 agagaaatgatatttgaacaactattttttgacaacttttgcaacaactttctctctcttactcacatt 42446295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 840 - 903
Target Start/End: Original strand, 6241624 - 6241687
Alignment:
Q  840 aaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    ||||||||||||||||||||||| ||||||||||||   |||| ||| ||||| ||||||||||    
T  6241624 aaatgatatttgaacatttattttgtgacaatttttatgacaactttatctctcatactcacat 6241687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 830 - 905
Target Start/End: Complemental strand, 6446596 - 6446521
Alignment:
Q  830 acattaagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||| ||||||||||||||||| || ||||| | ||||| |||||  |||| ||||||||| ||||||||||||    
T  6446596 acattatgagaaatgatatttgaagatctattttgcgacaacttttgtgacaactttctctctcatactcacatta 6446521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 836 - 903
Target Start/End: Original strand, 8920077 - 8920144
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    |||||||||||||||||||||  |||| ||||||| |||||  |||| ||||||||| ||||||||||    
T  8920077 agagaaatgatatttgaacatccattttgtgacaacttttgtgacaactttctctctcatactcacat 8920144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 838 - 905
Target Start/End: Original strand, 15478659 - 15478726
Alignment:
Q  838 agaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||| ||||||||| ||| |||| |||| || |||||||| |||||||||||| ||||||||||||    
T  15478659 agaaataatatttgaatattcattttgtgataacttttgcaataattttctctctcatactcacatta 15478726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 837 - 904
Target Start/End: Original strand, 27440479 - 27440545
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatt 904  Q
    ||||||||||||||| ||| | |||| ||||||| ||||| ||||||||||||||| |||||||||||    
T  27440479 gagaaatgatatttgtacaatcattttgtgacaacttttg-aacaattttctctctcatactcacatt 27440545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 611862 - 611932
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||| ||| ||  |||||| |||||  |||| ||||||||| ||||||||||||    
T  611862 aagagaaatgatatttgaacaattactttttgacaacttttgtgacaactttctctctcatactcacatta 611932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 839 - 905
Target Start/End: Complemental strand, 3674918 - 3674852
Alignment:
Q  839 gaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||| ||| ||||||  ||| ||||||||  |||| ||||||||||||||||||||||    
T  3674918 gaaatgatatttgtacaattatttcttgataatttttgggacaactttctctcttatactcacatta 3674852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 43214132 - 43214062
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||| ||||| |  |||| |||||  ||||||||||| || ||||||||||||    
T  43214132 aagagaaatgatatttgaacatctattttgcaacaacttttgtgacaattttctcactcatactcacatta 43214062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 22402698 - 22402630
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||||||| ||||||| ||||| |||||  || ||||| ||||||| ||||    
T  22402698 agagaaatgatatttgaacatttattttgtgacaacttttg-aacaacattttctctcatactcatatta 22402630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 838 - 903
Target Start/End: Original strand, 41173253 - 41173318
Alignment:
Q  838 agaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    ||||||||||||| |||||  |||| ||||||| ||||| ||||| ||||||||| ||||||||||    
T  41173253 agaaatgatatttaaacatccattttgtgacaacttttgtaacaactttctctctcatactcacat 41173318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 6517712 - 6517780
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  ||||  |||||| |||||  |||| ||||||||| ||||||||||||    
T  6517712 gagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacatta 6517780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 34124621 - 34124689
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  ||||  ||| ||||||||  | |||||||||||| ||||||||||||    
T  34124621 gagaaatgatatttgaacatccattttatgataatttttgtgataattttctctctcatactcacatta 34124689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 41175777 - 41175709
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||| ||||| | || || |||||  |||| ||||||||| ||||||||||||    
T  41175777 gagaaatgatatttgaacatctattttgggataacttttgtgacaactttctctctcatactcacatta 41175709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 834 - 898
Target Start/End: Original strand, 41724186 - 41724250
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatact 898  Q
    |||| |||| |||||||||||||||||||| |||||| |||||  |||||||| ||||| |||||    
T  41724186 taagtgaaacgatatttgaacatttatttactgacaacttttgtgacaattttttctctcatact 41724250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 835 - 874
Target Start/End: Original strand, 2224800 - 2224839
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttt 874  Q
    |||||||||||||||||||||| ||||| |||||||||||    
T  2224800 aagagaaatgatatttgaacatctatttggtgacaatttt 2224839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 835 - 902
Target Start/End: Complemental strand, 35464656 - 35464590
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcaca 902  Q
    ||||||||||||||||| ||  ||||||  ||| |||||||| ||||||||||||| |||||||||||    
T  35464656 aagagaaatgatatttgtacgattattttttgataatttttg-aacaattttctcttttatactcaca 35464590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 847 - 905
Target Start/End: Complemental strand, 39088929 - 39088870
Alignment:
Q  847 atttgaacatttatttagtgacaatttttgcaacaattttctctcttata-ctcacatta 905  Q
    ||||||||||| | |||| ||||| ||||||||||||||||||||| ||| |||||||||    
T  39088929 atttgaacattgacttagggacaacttttgcaacaattttctctctcatacctcacatta 39088870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 1080025 - 1079956
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||| ||||||  | ||||||||||  |||| ||||||||| ||| ||||||||    
T  1080025 aagagaaatgatatttgaacaattattt-tttacaatttttgtgacaactttctctctcatattcacatta 1079956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 831 - 905
Target Start/End: Original strand, 9581573 - 9581647
Alignment:
Q  831 cattaagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||| ||| |||||||||||||||||  ||||||||| || |||||  |||| ||||||| | ||||||||||||    
T  9581573 catttagaaaaatgatatttgaacatccatttagtgataacttttgtgacaactttctctttcatactcacatta 9581647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 17402995 - 17402925
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||  |||| |||||||||||||  |||| ||||| ||| |||  |||||||    
T  17402995 aagagaaatgatatttgaacatccatttggtgacaatttttgtgacaactttctatctcatagacacatta 17402925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 19481255 - 19481185
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||  ||||  ||| || |||||  |||| ||||||||| ||||||||||||    
T  19481255 aagagaaatgatatttgaacatccattttatgataacttttgtgacaactttctctctcatactcacatta 19481185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 837 - 903
Target Start/End: Complemental strand, 21922216 - 21922150
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    ||||||||||||||||||||  |||| |||||||  ||||  |||| ||||||||| ||||||||||    
T  21922216 gagaaatgatatttgaacatccattttgtgacaacgtttgtgacaactttctctctcatactcacat 21922150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 834 - 904
Target Start/End: Complemental strand, 32872972 - 32872902
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatt 904  Q
    ||||||||||||||||||||||  |||||  |||||| |||||  |||||||||| | | |||||||||||    
T  32872972 taagagaaatgatatttgaacaactattttttgacaacttttgtgacaattttctttttcatactcacatt 32872902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 35301664 - 35301594
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||| ||||||||||||||   |||| ||||||||||||   ||||||||||||| |||||||| ||||    
T  35301664 aagagagatgatatttgaacaaccattttgtgacaatttttatgacaattttctctcgtatactcatatta 35301594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 189775 - 189706
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||  ||||  ||| || |||||  |||| ||||||||| ||||||||||||    
T  189775 agagaaatgatatttgaacatccattttatgataacttttgtgacaactttctctctcatactcacatta 189706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 30640789 - 30640858
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||  |||| ||||||| |||||  |||| ||||||||| ||| | ||||||    
T  30640789 agagaaatgatatttgaacatccattttgtgacaacttttgttacaactttctctctcatatttacatta 30640858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 38730862 - 38730931
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||| |||   ||||||| ||||||||   ||||| ||||||||||||||| ||||||    
T  38730862 agagaaatgatatttgtacaaccatttagtaacaattttcttaacaactttctctcttatactaacatta 38730931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 2e-21; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 1853023 - 1852954
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  1853023 agagaaatgatatttgaacatctatttagtgacaacttttgcaacaactttctctctcatactcacatta 1852954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 33024643 - 33024574
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  33024643 agagaaatgatatttgaacatctatttagtgacaacttttgcaacaactttctctctcatactcacatta 33024574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 835 - 898
Target Start/End: Original strand, 37178701 - 37178764
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatact 898  Q
    ||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||    
T  37178701 aagagaaatgatatttgaacatttatttagtgataacttttacaacaattttctctcttatact 37178764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 831 - 905
Target Start/End: Complemental strand, 8411795 - 8411721
Alignment:
Q  831 cattaagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||| |||||||||||||||||||||  |||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  8411795 catttagagaaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcacatta 8411721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 20565190 - 20565121
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||  ||||||| |||||||||||||||| ||||||||| ||||||||||||    
T  20565190 agagaaatgatatttgaacatccatttagtaacaatttttgcaacaactttctctctcatactcacatta 20565121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 26585951 - 26585882
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||  |||||||||||| ||||||||||| |||||||| |||||||||||||    
T  26585951 agagaaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctcctatactcacatta 26585882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 3603111 - 3603179
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  |||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  3603111 gagaaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcacatta 3603179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 44294015 - 44294083
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||| || ||||| |||||||||||||||| |||||||||||| ||||||||||||    
T  44294015 gagaaatgatatttgaatatctattttgtgacaatttttgcaataattttctctctcatactcacatta 44294083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 902636 - 902706
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||| ||||||||||||| ||||  ||||| ||||||||| ||||||||||||    
T  902636 aagagaaatgatatttgaacatctatttagtgacaacttttataacaactttctctctcatactcacatta 902706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 1790506 - 1790576
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||| |||| ||||||| ||||||||||| ||||||||| ||||||| ||||    
T  1790506 aagagaaatgatatttgaacattcatttggtgacaacttttgcaacaactttctctctcatactcaaatta 1790576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 46082194 - 46082124
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||| ||||||||  ||||||||||||    
T  46082194 aagagaaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctcgcatactcacatta 46082124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 840 - 905
Target Start/End: Original strand, 29585996 - 29586061
Alignment:
Q  840 aaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||| |||||| | |||| ||||||||||||||||||||| ||||||||||||    
T  29585996 aaatgatatttgaacatctatttaataacaacttttgcaacaattttctctctcatactcacatta 29586061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 756856 - 756924
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  |||||||||||| ||||||||||| ||||| ||| ||||||||||||    
T  756856 gagaaatgatatttgaacatccatttagtgacaacttttgcaacaactttctttctcatactcacatta 756924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 9008225 - 9008293
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||| |||||||||| || |||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  9008225 gagaaataatatttgaacgttcatttagtgacaacttttgcaacaactttctctctcatactcacatta 9008293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 36577483 - 36577415
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  |||| ||||||| ||||||||||| ||||||||| ||||||||||||    
T  36577483 gagaaatgatatttgaacatccattttgtgacaacttttgcaacaactttctctctcatactcacatta 36577415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 834 - 958
Target Start/End: Complemental strand, 51286441 - 51286317
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacattannnnnnnacttatctctctattgttatg 933  Q
    |||||||||||||||||||||||||||||  |||||| |||||  |||| ||||||||| ||||||||||||         |||||||||||||| ||||    
T  51286441 taagagaaatgatatttgaacatttattttatgacaacttttgtgacaactttctctctcatactcacattattttttattttatctctctattgctatg 51286342  T
Q  934 aatttccgtgccaatac-actttttc 958  Q
      ||||||||||||||| ||||||||    
T  51286341 -gtttccgtgccaatactactttttc 51286317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 834 - 901
Target Start/End: Original strand, 26837449 - 26837516
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcac 901  Q
    |||||||||||||||||||||||  | ||||| |||| ||||||||||||||||||||| ||||||||    
T  26837449 taagagaaatgatatttgaacatccacttagtaacaacttttgcaacaattttctctctcatactcac 26837516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 838 - 905
Target Start/End: Complemental strand, 33054158 - 33054091
Alignment:
Q  838 agaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||| |||| ||||||| |||||| |||| ||||||||| ||||||||||||    
T  33054158 agaaatgatatttgaacattcattttgtgacaacttttgctacaactttctctctcatactcacatta 33054091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 836 - 958
Target Start/End: Original strand, 47214207 - 47214329
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacattannnnnnnacttatctctctattgttatgaa 935  Q
    ||||||||||||||||||||| |||||  |||||| |||||  |||| ||||||||| ||||||||||||         |||||||||||||||||||      
T  47214207 agagaaatgatatttgaacatctattttatgacaacttttgtgacaactttctctctcatactcacattattttttactttatctctctattgttatg-g 47214305  T
Q  936 tttccgtgccaatac-actttttc 958  Q
    ||||||||||||||| ||||||||    
T  47214306 tttccgtgccaatactactttttc 47214329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 7128117 - 7128186
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||  |||||||||||| ||||||||||| || |||||| ||| ||||||||    
T  7128117 agagaaatgatatttgaacatccatttagtgacaacttttgcaacaacttcctctctcatattcacatta 7128186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 834 - 903
Target Start/End: Complemental strand, 37588749 - 37588680
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    ||||||||||||||||||||||||||||| ||||||| |||||  |||| ||||||| | ||||||||||    
T  37588749 taagagaaatgatatttgaacatttattttgtgacaacttttgttacaactttctctttcatactcacat 37588680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 845 - 905
Target Start/End: Original strand, 21340530 - 21340590
Alignment:
Q  845 atatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||| |||||||||||| ||||||||||| ||||||| | ||||||||||||    
T  21340530 atatttgaacattcatttagtgacaacttttgcaacaactttctctttcatactcacatta 21340590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 35136844 - 35136912
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  |||| ||||||| ||||||||||| ||||| ||| ||||||||||||    
T  35136844 gagaaatgatatttgaacatccattttgtgacaacttttgcaacaactttctttctcatactcacatta 35136912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 3024823 - 3024753
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||| |||||||||||| |||||||||| ||  ||||||| |||||||||||| ||||||| ||||    
T  3024823 aagagaaatcatatttgaacatatatttagtgataacctttgcaataattttctctctcatactcatatta 3024753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 32915145 - 32915075
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||| |||||  |||||| |||||  |||| ||||||||| ||||||||||||    
T  32915145 aagagaaatgatatttgaacatctattttatgacaacttttgtgacaactttctctctcatactcacatta 32915075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 7171308 - 7171239
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||| |||||| |||||| |||||  |||| ||| ||||| ||||||||||||    
T  7171308 agagaaatgatatttgaacatctatttaatgacaacttttgtgacaactttatctctcatactcacatta 7171239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 837 - 958
Target Start/End: Complemental strand, 21486388 - 21486267
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacattannnnnnnacttatctctctattgttatgaat 936  Q
    |||||||||||||||||||| ||||| ||||||| | ||| || || ||||||||| ||||||||||||         |||||||||||||| ||||  |    
T  21486388 gagaaatgatatttgaacatctatttggtgacaactattgtaataactttctctctcatactcacattattttttactttatctctctattgctatg-gt 21486290  T
Q  937 ttccgtgccaatac-actttttc 958  Q
    |||||||||||||| ||||||||    
T  21486289 ttccgtgccaatactactttttc 21486267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 834 - 903
Target Start/End: Original strand, 26547231 - 26547299
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    |||||||||||||||||| |||| ||||| ||||||||||||| ||||| ||||||||| ||| ||||||    
T  26547231 taagagaaatgatatttgtacatatattttgtgacaatttttg-aacaactttctctctcatattcacat 26547299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 34040572 - 34040503
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||  |||| |||| || |||| |||||| ||||||||| ||||||||||||    
T  34040572 agagaaatgatatttgaacatccattttgtgataacttttacaacaactttctctctcatactcacatta 34040503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 46172478 - 46172410
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||  ||| |||||||| ||||| || |||||||||||| ||||||||||||    
T  46172478 agagaaatgatatttgaacatccatt-agtgacaacttttgtaataattttctctctcatactcacatta 46172410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 835 - 903
Target Start/End: Complemental strand, 7078573 - 7078506
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    ||||||||||||||||| |||| ||||| ||||||| ||||| ||||| ||||||||| ||||||||||    
T  7078573 aagagaaatgatatttgtacatctattttgtgacaacttttg-aacaactttctctctcatactcacat 7078506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 16986938 - 16987006
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||| |||| |||| |||| |||  |||| ||||||||| ||||||||||||    
T  16986938 gagaaatgatatttgaacattcatttggtgataattattgtgacaactttctctctcatactcacatta 16987006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 836 - 904
Target Start/End: Complemental strand, 45008236 - 45008168
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatt 904  Q
    ||||||||||||||| |||| |||||| ||||||| ||||| || || ||||||||| |||||||||||    
T  45008236 agagaaatgatatttcaacaattattttgtgacaacttttgtaataactttctctctcatactcacatt 45008168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 841 - 905
Target Start/End: Complemental strand, 47215796 - 47215732
Alignment:
Q  841 aatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||| ||| || |||||| |||||  |||||||||||||| ||||||||||||    
T  47215796 aatgatatttgaacatctatataatgacaacttttgtgacaattttctctctcatactcacatta 47215732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 834 - 905
Target Start/End: Complemental strand, 10890120 - 10890049
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||||  ||||  |||||| |||||  |||| ||||||||| ||||||||||||    
T  10890120 taagagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacatta 10890049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 838 - 905
Target Start/End: Original strand, 48325968 - 48326035
Alignment:
Q  838 agaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||  || ||||| ||||||| ||||||||||| ||||||||| ||||| ||||||    
T  48325968 agaaatgatatttgataatctattttgtgacaacttttgcaacaactttctctctcatacttacatta 48326035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 15705135 - 15705065
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||  ||||  |||||| |||||  |||| ||||||||| ||||||||||||    
T  15705135 aagagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacatta 15705065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 35539432 - 35539362
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaat-ttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||| ||||||||| ||||||| |||||  |||| |||| |||||||| ||||||||    
T  35539432 agagaaatgatatttgaatatttatttattgacaattttttgtgacaactttcactcttatattcacatta 35539362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 839 - 950
Target Start/End: Original strand, 51191790 - 51191900
Alignment:
Q  839 gaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacattannnnnnnacttatctctctattgttatgaattt 938  Q
    |||||||||||| |||||  ||| |||||||| ||||| ||||| ||| ||||| ||||||||||||         |||||||||||||||||||  |||    
T  51191790 gaaatgatatttcaacatccattcagtgacaacttttgtaacaactttttctctcatactcacattacattttactttatctctctattgttatg-cttt 51191888  T
Q  939 ccgtgccaatac 950  Q
    ||||||||||||    
T  51191889 ccgtgccaatac 51191900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 52362480 - 52362550
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||  ||||  |||||| |||||  |||| ||||||||| ||||||||||||    
T  52362480 aagagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacatta 52362550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 834 - 903
Target Start/End: Complemental strand, 11097958 - 11097890
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    |||||||||||||||||| ||||  |||| ||||||| ||||| ||||| ||||||||| ||||||||||    
T  11097958 taagagaaatgatatttgtacatccattttgtgacaacttttg-aacaactttctctctcatactcacat 11097890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 26967209 - 26967278
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||| ||||| |||||| |||||  |||| ||||||||| | | ||||||||    
T  26967209 agagaaatgatatttgaacattaatttaatgacaacttttgtgacaactttctctctcacattcacatta 26967278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 34008179 - 34008248
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||| |||||  |||||| |||||  |||| ||||| ||| ||||||||||||    
T  34008179 agagaaatgatatttgaacatctattttatgacaacttttgtgacaactttctatctcatactcacatta 34008248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 13489662 - 13489730
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  ||||  |||||| |||||  |||| ||||||||| ||||||||||||    
T  13489662 gagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacatta 13489730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 32938859 - 32938926
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||| ||| ||| || ||||||||||||  ||||| ||||||||||||||| ||||||    
T  32938859 gagaaatgatatttgtacaattaatttgtgacaattttt-taacaactttctctcttatacttacatta 32938926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 834 - 905
Target Start/End: Complemental strand, 21433475 - 21433404
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||| |||   |||| || |||| |||||  |||| ||||||||||||||||||||||    
T  21433475 taagagaaatgatatttgtacaaccattttgtaacaacttttgtgacaactttctctcttatactcacatta 21433404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 834 - 892
Target Start/End: Complemental strand, 45384044 - 45383985
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaa-tttttgcaacaattttctctct 892  Q
    |||||||||| |||||| ||||||||||| |||| || |||||| |||||||||||||||    
T  45384044 taagagaaattatattttaacatttattttgtgaaaattttttgtaacaattttctctct 45383985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 834 - 901
Target Start/End: Complemental strand, 50328215 - 50328148
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcac 901  Q
    ||||||||||||||||| |||||  | || ||||||| ||||||||||| ||||||| | ||||||||    
T  50328215 taagagaaatgatatttaaacatccactttgtgacaacttttgcaacaactttctctttcatactcac 50328148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 834 - 896
Target Start/End: Original strand, 11822954 - 11823016
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttata 896  Q
    ||||||||||||||||||||||| |||||   ||||||||||   |||||||| |||||||||    
T  11822954 taagagaaatgatatttgaacatctatttgaagacaatttttatgacaattttatctcttata 11823016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 30535989 - 30536059
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||| ||| | ||||  | ||||||||||  |||| ||||||||| ||||||||||||    
T  30535989 aagagaaatgatatttgtacaatcattttttaacaatttttgtgacaactttctctctcatactcacatta 30536059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 837 - 903
Target Start/End: Complemental strand, 44789214 - 44789148
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    ||||||||||||||||||||  |||| ||||||| |||||  |||| ||||||| | ||||||||||    
T  44789214 gagaaatgatatttgaacatccattttgtgacaacttttgttacaactttctctttcatactcacat 44789148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 837 - 903
Target Start/End: Original strand, 50433769 - 50433835
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    ||||||||||||||||||||  |||| || |||| ||||   |||| ||||||||||||||||||||    
T  50433769 gagaaatgatatttgaacatcgatttggtcacaacttttatgacaactttctctcttatactcacat 50433835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 50775230 - 50775160
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||| ||||||||||  ||| ||||||  ||||||||||||  |||| ||||||||| ||||||||||||    
T  50775230 aagagtaatgatatttatacaattattttttgacaatttttgtgacaactttctctctcatactcacatta 50775160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 50824739 - 50824809
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||| || ||| ||||  ||| ||||||||  |||||||||||||| ||||||| ||||    
T  50824739 aagagaaatgatatttaaatattaatttcttgataatttttgtgacaattttctctctcatactcatatta 50824809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 1689390 - 1689459
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||| |||  |||||  | ||||||||||  |||| ||||||||| ||||||||||||    
T  1689390 agagaaatgatatttgtacaactattttataacaatttttgtgacaactttctctctcatactcacatta 1689459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 4514526 - 4514457
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||| || ||  ||||||| |||| ||||||||||| ||||| ||| ||| ||||||||    
T  4514526 agagaaatgatattttaatatccatttagttacaacttttgcaacaactttctatctcatattcacatta 4514457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 9567033 - 9566964
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||   ||||  |||||| |||||  |||| ||||||||| ||||||||||||    
T  9567033 agagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttctctctcatactcacatta 9566964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 856 - 905
Target Start/End: Original strand, 25259102 - 25259151
Alignment:
Q  856 tttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||  ||| |||||||||||||||||| ||||||||||||| ||||    
T  25259102 tttattttatgataatttttgcaacaattttatctcttatactcaaatta 25259151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 835 - 892
Target Start/End: Original strand, 29632432 - 29632488
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctct 892  Q
    ||||||||||||||||| |||||||||| || |||||||||   ||||||||||||||    
T  29632432 aagagaaatgatatttgtacatttattttgtaacaattttt-tgacaattttctctct 29632488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 34254423 - 34254354
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||| ||||  |||||| || ||  |||| ||| ||||| ||||||||||||    
T  34254423 agagaaatgatatttgaacattcattttatgacaacttctgtgacaactttatctctcatactcacatta 34254354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 47721408 - 47721477
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||| |||||||||||  |||||| |||||  |||| ||||| ||| ||| ||||||||    
T  47721408 agagaaatgatatttaaacatttattttttgacaacttttgtgacaactttctgtctcatattcacatta 47721477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 47728400 - 47728469
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||| |||||||||||  |||||| |||||  |||| ||||| ||| ||| ||||||||    
T  47728400 agagaaatgatatttaaacatttattttttgacaacttttgtgacaactttctgtctcatattcacatta 47728469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 6e-21; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 45529317 - 45529249
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  45529317 gagaaatgatatttgaacattcatttagtgacaatttttgtaacaactttctctctcatactcacatta 45529249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 830 - 905
Target Start/End: Original strand, 5864196 - 5864271
Alignment:
Q  830 acattaagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||||||||| || |||||| |||||||| ||||||||||||||| ||| ||||||||    
T  5864196 acattaagagaaatgatatttgaacattcatctagtgataatttttgtaacaattttctctctcataatcacatta 5864271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 33589303 - 33589233
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||| |||||  |||||||||||| ||||||||||||||||||||| ||||||||||||    
T  33589303 aagagaaatgatatttcaacatccatttagtgacaacttttgcaacaattttctctctcatactcacatta 33589233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 41520966 - 41521036
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||  ||||||||| || ||||||||||||||||||||| ||||||||||||    
T  41520966 aagagaaatgatatttgaacatccatttagtgataacttttgcaacaattttctctctcatactcacatta 41521036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 16966784 - 16966853
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||  |||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  16966784 agagaaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcacatta 16966853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 30136087 - 30136018
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||| ||| ||||||||    
T  30136087 agagaaatgatatttgaacatttatttaatgacaacttttgcaacaactttctctctcatattcacatta 30136018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 1633961 - 1633893
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  |||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  1633961 gagaaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcacatta 1633893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 38708367 - 38708299
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||| ||||| |||| |||||||| ||||||||||| ||||||||||||||||    
T  38708367 gagaaatgatatttgaacatctatttggtgataatttttgtaacaattttctttcttatactcacatta 38708299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 6991881 - 6991811
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||| ||||| |||||||||||||  | |||||||||||| ||||||||||||    
T  6991881 aagagaaatgatatttgaacatctatttggtgacaatttttgtgataattttctctctcatactcacatta 6991811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 35564287 - 35564357
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||  ||||||||| |||||||||||||| ||||| ||| ||||||||||||    
T  35564287 aagagaaatgatatttgaacatccatttagtgataatttttgcaacaactttctatctcatactcacatta 35564357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 36110136 - 36110206
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||  ||||||||| || ||||||||||||||||||| | ||||||||||||    
T  36110136 aagagaaatgatatttgaacatccatttagtgaaaacttttgcaacaattttctctttcatactcacatta 36110206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 7592849 - 7592917
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||| ||| ||||| ||| ||||||||    
T  7592849 gagaaatgatatttgaacattcatttagtgacaacttttgcaacaactttatctctcatagtcacatta 7592917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 11017805 - 11017873
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  ||||| |||||| ||||||||||| ||||||||| ||||||||||||    
T  11017805 gagaaatgatatttgaacatccatttaatgacaacttttgcaacaactttctctctcatactcacatta 11017873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 16613634 - 16613702
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||| ||||| |||||||||||||| |||| ||| ||||| ||||||||||||    
T  16613634 gagaaatgatatttgaacatctattttgtgacaatttttgctacaactttttctctcatactcacatta 16613702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 5277777 - 5277707
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||  |||| |||||||  ||||| |||||||||||||| ||||||||||||    
T  5277777 aagagaaatgatatttgaacatccattttgtgacaacctttgctacaattttctctctcatactcacatta 5277707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 839 - 950
Target Start/End: Complemental strand, 40739981 - 40739871
Alignment:
Q  839 gaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacattannnnnnnacttatctctctattgttatgaattt 938  Q
    |||||||||||| ||||| |||||| |||||| ||||||||||||||| ||||| ||| ||||||||         |||||||||||||||||||  |||    
T  40739981 gaaatgatatttcaacatctatttaatgacaacttttgcaacaattttttctctcatattcacattattttttactttatctctctattgttatg-gttt 40739883  T
Q  939 ccgtgccaatac 950  Q
    ||||||||||||    
T  40739882 ccgtgccaatac 40739871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 16872227 - 16872159
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  |||| ||||||| ||||||||||| ||||||| | ||||||||||||    
T  16872227 gagaaatgatatttgaacatccattttgtgacaacttttgcaacaactttctctatcatactcacatta 16872159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 34018808 - 34018876
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||   ||||  |||||| ||||||||||||||||||||| ||||||||||||    
T  34018808 gagaaatgatatttgaacaaccattttctgacaacttttgcaacaattttctctctcatactcacatta 34018876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 34490228 - 34490160
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||| || ||  |||| ||||||| ||||||||||| ||||||||||||||||||||||    
T  34490228 gagaaatgatatttaaatatcaattttgtgacaacttttgcaacaactttctctcttatactcacatta 34490160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 835 - 903
Target Start/End: Original strand, 41600307 - 41600375
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    ||||||||||||||||||||||| ||||| |||||| |||||  |||| ||||||||| ||||||||||    
T  41600307 aagagaaatgatatttgaacattcatttattgacaacttttgtgacaactttctctctcatactcacat 41600375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 837 - 903
Target Start/End: Original strand, 18651370 - 18651436
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    |||||||||||||||||||| ||||| || |||| |||||  |||||||||||||| ||||||||||    
T  18651370 gagaaatgatatttgaacatctatttggtaacaacttttgtgacaattttctctctcatactcacat 18651436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 859 - 905
Target Start/End: Complemental strand, 32847736 - 32847690
Alignment:
Q  859 atttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  32847736 atttagtgacaacttttgcaacaactttctctcttatactcacatta 32847690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 840 - 905
Target Start/End: Complemental strand, 9549267 - 9549202
Alignment:
Q  840 aaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||  |||| ||||||| |||||  |||||||||||||| ||||||||||||    
T  9549267 aaatgatatttgaacatccattttgtgacaacttttgtgacaattttctctctcatactcacatta 9549202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 834 - 903
Target Start/End: Original strand, 44064354 - 44064423
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    ||||| ||||||||||||||||| ||||| ||||||||||||| |||||  |||||| | ||||||||||    
T  44064354 taagataaatgatatttgaacatctattttgtgacaatttttgtaacaaccttctctttcatactcacat 44064423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 836 - 900
Target Start/End: Original strand, 8645164 - 8645228
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactca 900  Q
    |||||||||||||||||||||  |||| |||| ||||||||  |||||||||||||| |||||||    
T  8645164 agagaaatgatatttgaacatccatttggtgataatttttgggacaattttctctctcatactca 8645228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 838 - 890
Target Start/End: Original strand, 34591263 - 34591315
Alignment:
Q  838 agaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctct 890  Q
    |||||||||||||||||||| ||||||| |||| ||||||||||| |||||||    
T  34591263 agaaatgatatttgaacattcatttagtcacaacttttgcaacaactttctct 34591315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 34718115 - 34718183
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  |||| ||||||| |||||  |||| ||||||||| ||||||||||||    
T  34718115 gagaaatgatatttgaacatccattttgtgacaacttttgttacaactttctctctcatactcacatta 34718183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 845 - 905
Target Start/End: Complemental strand, 37784034 - 37783974
Alignment:
Q  845 atatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||  |||||||||||| ||||||||||| ||||||||| ||||||| ||||    
T  37784034 atatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcagatta 37783974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 836 - 903
Target Start/End: Original strand, 3946239 - 3946306
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    |||||||||||||||||||||  |||| ||||||| |||||  |||| ||||||||| ||||||||||    
T  3946239 agagaaatgatatttgaacatccattttgtgacaacttttgtgacaactttctctctcatactcacat 3946306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 832 - 951
Target Start/End: Complemental strand, 1871690 - 1871572
Alignment:
Q  832 attaagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacattannnnnnnacttatctctctattgtta 931  Q
    ||||||||||||||||||| |||||  |||| ||||||| |||||  ||||  |||||||| ||||||||||||         |||||||||||||||||    
T  1871690 attaagagaaatgatattttaacatccatttggtgacaaattttgtgacaacattctctctcatactcacattatttttcactttatctctctattgtta 1871591  T
Q  932 tgaatttccgtgccaataca 951  Q
    ||  ||||||||| ||||||    
T  1871590 tg-gtttccgtgcgaataca 1871572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 12783764 - 12783834
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||  ||||| ||||||||||||  |||| ||| |||||| || ||||||||    
T  12783764 aagagaaatgatatttgaacatccatttaatgacaatttttgtgacaactttatctcttttattcacatta 12783834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 9208065 - 9208134
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||  ||||| ||||||||||||  |||| ||  ||||| ||||||||||||    
T  9208065 agagaaatgatatttgaacatccatttaatgacaatttttgtgacaacttcatctctcatactcacatta 9208134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 31596947 - 31597016
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||  ||||  ||||||||||||  |||| | ||||||| ||||||||||||    
T  31596947 agagaaatgatatttgaacatccattttatgacaatttttgtgacaactctctctctcatactcacatta 31597016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 32844012 - 32843944
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||| ||||||||||||| ||||||||||||  |||||||||| ||| |||||  |||||||||||    
T  32844012 agagaaattatatttgaacattcatttagtgacaa-ctttgcaacaactttttctctcttactcacatta 32843944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 835 - 904
Target Start/End: Complemental strand, 33605151 - 33605082
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatt 904  Q
    |||||||||||||||||||||   ||||  ||| || ||||| ||||||||||||||| |||||||||||    
T  33605151 aagagaaatgatatttgaacaaccattttatgataacttttggaacaattttctctctcatactcacatt 33605082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 837 - 901
Target Start/End: Original strand, 12707149 - 12707213
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcac 901  Q
    ||||||||||||||||||||  ||||  |||||| |||||| |||| ||||||||| ||||||||    
T  12707149 gagaaatgatatttgaacatccattttatgacaacttttgcgacaactttctctctcatactcac 12707213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 835 - 903
Target Start/End: Complemental strand, 29440595 - 29440527
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    ||||||||||||||||||||||| |||| |||| || |||||  |||| ||||| ||| ||||||||||    
T  29440595 aagagaaatgatatttgaacattcatttggtgataacttttgtgacaactttctttctcatactcacat 29440527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 34473947 - 34474016
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaat-ttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||| ||||| | || |||||||| |||||  |||||||||||||| ||||||||||||    
T  34473947 aagagaaatgatatttgtacattcactttgtgacaatcttttg--acaattttctctctcatactcacatta 34474016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 862 - 905
Target Start/End: Complemental strand, 11658046 - 11658003
Alignment:
Q  862 tagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||    
T  11658046 tagtgacaacttttgcaacaactttctctctcatactcacatta 11658003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 838 - 905
Target Start/End: Complemental strand, 16327222 - 16327155
Alignment:
Q  838 agaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||| || || ||||| | ||||| |||||| |||| ||||||||| ||||||||||||    
T  16327222 agaaatgatatttaaatatctattttgcgacaacttttgcgacaactttctctctcatactcacatta 16327155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 836 - 903
Target Start/End: Original strand, 36064029 - 36064095
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    |||||||||||||||| ||| | |||| ||||||| |||||  |||||||||||||| ||||||||||    
T  36064029 agagaaatgatatttgtacaatcattttgtgacaacttttg-gacaattttctctctcatactcacat 36064095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 859 - 905
Target Start/End: Complemental strand, 7956056 - 7956010
Alignment:
Q  859 atttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||| ||||| ||||||||||| ||||||||| ||||||||||||    
T  7956056 atttagggacaacttttgcaacaactttctctctcatactcacatta 7956010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 24798431 - 24798361
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||| ||||||| | | ||||||  |||||||||||  ||||| ||||||||| ||||||||||||    
T  24798431 aagagaaattatatttgtataattattttttgacaatttttttaacaactttctctctcatactcacatta 24798361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 837 - 903
Target Start/End: Original strand, 29991412 - 29991478
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    ||||||||||||||||||||  |||| ||||||| |||||  |||| ||||||| | ||||||||||    
T  29991412 gagaaatgatatttgaacatccattttgtgacaacttttgttacaactttctctttcatactcacat 29991478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 41159962 - 41159892
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||| |||||||||| || ||||| | ||||| |||||  |||| ||||||||| ||||||||||||    
T  41159962 aagagaaacgatatttgaatatatattttgcgacaacttttgtgacaactttctctctcatactcacatta 41159892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 42443103 - 42443171
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||| ||| | |||||||||||| ||||   |||| ||||||||| ||||||||||||    
T  42443103 agagaaatgatatttgtacaatcatttagtgacaactttt-agacaactttctctctcatactcacatta 42443171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 3e-20; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 834 - 905
Target Start/End: Complemental strand, 2777390 - 2777319
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||||  ||||||| |||| ||||||||||||||||||||| ||||||||||||    
T  2777390 taagagaaatgatatttgaacatccatttagtaacaacttttgcaacaattttctctctcatactcacatta 2777319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 835 - 950
Target Start/End: Complemental strand, 2075524 - 2075410
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacattannnnnnnacttatctctctattgttatga 934  Q
    ||||||||||||||||||||||  |||||||||||  ||||||||||| ||||||||| ||||||||||||         |||||||||||||||||| |    
T  2075524 aagagaaatgatatttgaacatccatttagtgacagcttttgcaacaactttctctctcatactcacattattttttactttatctctctattgttat-a 2075426  T
Q  935 atttccgtgccaatac 950  Q
     |||||||||||||||    
T  2075425 gtttccgtgccaatac 2075410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 832 - 905
Target Start/End: Complemental strand, 13143458 - 13143385
Alignment:
Q  832 attaagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||  |||||||||||||||| |||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  13143458 attaagagtgatgatatttgaacattcattttgtgacaatttttgcaacaactttctctctcatactcacatta 13143385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 836 - 903
Target Start/End: Complemental strand, 30036866 - 30036799
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| ||| ||||||    
T  30036866 agagaaatgatatttgaacatctatttagtgacaacttttgcaacaactttctctctcataatcacat 30036799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 840 - 903
Target Start/End: Complemental strand, 30152598 - 30152535
Alignment:
Q  840 aaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    |||||||||||||||||| |||||||||||| ||||||||||| ||||||||| ||||||||||    
T  30152598 aaatgatatttgaacattcatttagtgacaacttttgcaacaactttctctctcatactcacat 30152535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 4820250 - 4820319
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||  ||||||||| || ||||||||||| ||||||||| ||||||||||||    
T  4820250 agagaaatgatatttgaacatccatttagtgataacttttgcaacaactttctctctcatactcacatta 4820319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 11547601 - 11547532
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||| ||||||||||||  ||||| |||||| ||||||||||||||||||||| ||||||||||||    
T  11547601 agagaaataatatttgaacatccatttaatgacaacttttgcaacaattttctctctcatactcacatta 11547532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 754509 - 754441
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||||| ||| ||||| ||||||||||||    
T  754509 gagaaatgatatttgaacattcattttgtgacaacttttgcaacaactttttctctcatactcacatta 754441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 35213632 - 35213564
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||| ||||| ||||||| ||||| ||||| ||||||||| ||||||||||||    
T  35213632 gagaaatgatatttgaacatctattttgtgacaacttttgtaacaactttctctctcatactcacatta 35213564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 3611033 - 3610964
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||  ||||||||| || ||||||||||| ||| ||||| ||||||||||||    
T  3611033 agagaaatgatatttgaacatccatttagtgataacttttgcaacaactttttctctcatactcacatta 3610964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 2689135 - 2689067
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  ||||| ||||||||||||  |||| ||||||||| ||||||||||||    
T  2689135 gagaaatgatatttgaacatccatttaatgacaatttttgtgacaactttctctctcatactcacatta 2689067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 837 - 902
Target Start/End: Complemental strand, 14986812 - 14986751
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcaca 902  Q
    |||||||||||||||||||||||    ||||||| ||||||||||||||||||||| |||||||||    
T  14986812 gagaaatgatatttgaacattta----gtgacaacttttgcaacaattttctctctcatactcaca 14986751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 834 - 905
Target Start/End: Original strand, 24842365 - 24842436
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||||| ||||| |||||| |||||  |||  ||||||||| ||||||||||||    
T  24842365 taagagaaatgatatttgaacattcatttaatgacaacttttgtgacagctttctctctcatactcacatta 24842436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 2242095 - 2242025
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||| | ||||  ||||||||||||  |||| ||||||||| ||||||||||||    
T  2242095 aagagaaatgatatttgaacaatcattttttgacaatttttgtgacaactttctctctcatactcacatta 2242025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 5327665 - 5327595
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||  |||||||||||| ||||  ||||| ||||||||| ||||||| ||||    
T  5327665 aagagaaatgatatttgaacatccatttagtgacaacttttataacaactttctctctcatactcatatta 5327595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 33651018 - 33651088
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||| ||||| || | ||||||||  |||| ||||||||| ||||||||||||    
T  33651018 aagagaaatgatatttgaacatctattttgtaataatttttgtgacaactttctctctaatactcacatta 33651088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 3198959 - 3199028
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||| |||| |||| |||||||   |||| ||||||||| ||||||||||||    
T  3198959 agagaaatgatatttgaacattcatttggtgataatttttatgacaactttctctctcatactcacatta 3199028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 15318261 - 15318191
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||  |||| ||||||| |||||  |||| ||||||||| ||| ||||||||    
T  15318261 aagagaaatgatatttgaacatccattttgtgacaacttttgttacaactttctctctcatattcacatta 15318191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 17551452 - 17551382
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||   ||||  |||||| ||||| ||||| ||||||||| ||||||||||||    
T  17551452 aagagaaatgatatttgaacaaccattttttgacaacttttgtaacaactttctctctcatactcacatta 17551382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 18141373 - 18141304
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||| |||||| ||||  |||||| |||||  |||| ||||||||| ||||||||||||    
T  18141373 agagaaatgatatttaaacattcattttatgacaacttttgtgacaactttctctctcatactcacatta 18141304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 20822940 - 20822871
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||  ||||  |||||| |||||  |||| ||||||||| ||||||||||||    
T  20822940 agagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacatta 20822871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 834 - 903
Target Start/End: Original strand, 33421757 - 33421826
Alignment:
Q  834 taagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    |||||||||||||||||||||||  |||| ||||||| |||||  |||| ||||||| | ||||||||||    
T  33421757 taagagaaatgatatttgaacatccattttgtgacaacttttgttacaactttctctttcatactcacat 33421826  T

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Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 835 - 904
Target Start/End: Complemental strand, 34442136 - 34442067
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatt 904  Q
    |||||||||||||||||| ||  |||||  |||||| |||||  |||||||||||||| |||||||||||    
T  34442136 aagagaaatgatatttgagcaactattttatgacaacttttgtgacaattttctctctcatactcacatt 34442067  T

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Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 6531254 - 6531186
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  |||| ||||||| || ||  |||| ||||||||| ||||||||||||    
T  6531254 gagaaatgatatttgaacatccattttgtgacaacttatgggacaactttctctctcatactcacatta 6531186  T

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Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 835 - 874
Target Start/End: Original strand, 2943444 - 2943483
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttt 874  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  2943444 aagagaaatgatatttgaacatttattttatgacaatttt 2943483  T

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Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 34504015 - 34504088
Alignment:
Q  835 aagagaaatgatatttgaacat---ttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||| ||||||||||||||||   ||| |||| || || ||||||||||| ||||||||| ||||||||||||    
T  34504015 aagaggaatgatatttgaacatccattaattagcgataacttttgcaacaactttctctctcatactcacatta 34504088  T

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Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 8505847 - 8505777
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||| | ||||  |||||| |||||  |||| ||||||||| ||| ||||||||    
T  8505847 aagagaaatgatatttgaacaatcattttttgacaacttttgtgacaactttctctctcatattcacatta 8505777  T

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Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 838 - 888
Target Start/End: Complemental strand, 12204663 - 12204614
Alignment:
Q  838 agaaatgatatttgaacatttatttagtgacaatttttgcaacaattttct 888  Q
    ||||||||||||| ||||||||||| || ||||||||| ||||||||||||    
T  12204663 agaaatgatattttaacatttattttgtaacaattttt-caacaattttct 12204614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 15368896 - 15368826
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||  |||| || |||| |||||  |||| ||||||||| ||||| ||||||    
T  15368896 aagagaaatgatatttgaacatccattttgtaacaacttttgttacaactttctctctcatactaacatta 15368826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 17417308 - 17417239
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||| ||| | |||  |||||||||||||  |||| ||||||||| ||||||||||||    
T  17417308 aagagaaatgatatttgtacaatcattatgtgacaatttttg-gacaactttctctctcatactcacatta 17417239  T

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Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 30423668 - 30423598
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||| ||||||  |||||  ||||| ||||| ||||||| | ||| ||||||||    
T  30423668 aagagaaatgatatttgaacaattattttttgacagcttttgtaacaactttctctatcatattcacatta 30423598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 835 - 905
Target Start/End: Complemental strand, 32459590 - 32459520
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||  ||||  |||||| |||||  |||| ||||||||| ||| ||||||||    
T  32459590 aagagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatattcacatta 32459520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 832 - 905
Target Start/End: Original strand, 23628355 - 23628428
Alignment:
Q  832 attaagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||| ||||||||||||||||| ||  ||||| ||| ||||||||  |||||||||| ||| ||||||| ||||    
T  23628355 attatgagaaatgatatttgaatatccatttaatgataatttttgtgacaattttctatctcatactcatatta 23628428  T

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Target: scaffold0321 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 19635 - 19704
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||  |||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  19635 agagaaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcacatta 19704  T

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Target: scaffold0449 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 837 - 950
Target Start/End: Original strand, 9203 - 9315
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacattannnnnnnacttatctctctattgttatgaat 936  Q
    |||||||||||||||||||| |||||| |||||| ||||| ||||| ||||||||||||||||| ||||         |||||||||||||| ||| |||    
T  9203 gagaaatgatatttgaacatctatttaatgacaacttttgaaacaactttctctcttatactcatattactttttactttatctctctattgctat-aat 9301  T
Q  937 ttccgtgccaatac 950  Q
    ||||||||||||||    
T  9302 ttccgtgccaatac 9315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 5 - 75
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||  ||||||||| || ||||||||||||||||||| | ||||||||||||    
T  5 aagagaaatgatatttgaacatccatttagtgaaaacttttgcaacaattttctctttcatactcacatta 75  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 835 - 905
Target Start/End: Original strand, 8212 - 8282
Alignment:
Q  835 aagagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||||| ||||  |||||| ||||||||||| ||||||||| ||| ||| ||||    
T  8212 aagagaaatgatatttgaacattcattttatgacaacttttgcaacaactttctctctcatattcatatta 8282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 836 - 897
Target Start/End: Complemental strand, 72119 - 72058
Alignment:
Q  836 agagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatac 897  Q
    |||||||||||||||||| ||  |||| |||||||||||||| |||| |||||||| |||||    
T  72119 agagaaatgatatttgaatatccattttgtgacaatttttgctacaactttctctcctatac 72058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 10964 - 11032
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    ||||||||||||||||||||  |||| | ||||| |||||  |||| ||||||||| ||||||||||||    
T  10964 gagaaatgatatttgaacatccattttgggacaacttttgtgacaactttctctctcatactcacatta 11032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 867 - 905
Target Start/End: Original strand, 23106 - 23144
Alignment:
Q  867 acaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  23106 acaatttttgcaacaattttctctctcatattcacatta 23144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 837 - 903
Target Start/End: Original strand, 41755 - 41821
Alignment:
Q  837 gagaaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacat 903  Q
    ||||||| ||| ||||||||| |||| |||||||||||||  |||| ||||||||| || |||||||    
T  41755 gagaaataatacttgaacattcatttggtgacaatttttgtgacaactttctctctcattctcacat 41821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 840 - 905
Target Start/End: Complemental strand, 34862 - 34797
Alignment:
Q  840 aaatgatatttgaacatttatttagtgacaatttttgcaacaattttctctcttatactcacatta 905  Q
    |||||||||||| ||| ||| || ||||||||||||   |||| ||||||||| ||||||||||||    
T  34862 aaatgatatttgtacaattaatttgtgacaatttttatgacaactttctctctcatactcacatta 34797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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