View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2813_low_3 (Length: 250)
Name: NF2813_low_3
Description: NF2813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2813_low_3 |
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Alignment Details
Target: chr1 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 44189605 - 44189369
Alignment:
| Q |
1 |
ttcaaagacgacgtgttcaagccttcctgctccggctgccaagaaaatgatactccctaacatgtttattgaccctcactcgctgggaaagcgcagacaa |
100 |
Q |
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| T |
44189605 |
ttcaaagacgacatgttcaagccttcctgctccggctgccaagaaaatgatactccctaacacgtttatcgaccctcactcgttgggaaagcgcagacaa |
44189506 |
T |
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| Q |
101 |
gtgaaaggtgcatgtaatatgtagccttaaaaaacacttttacaattgtgaatttcctccctaaagatataatgaattttgatttttaatcacacaatgt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44189505 |
gtgaaaggtgcatgtaatatgtagccttaaaaaacacttttacaattgtgaatttcctccctaaagatataatgaattttgatttttaatcacacaatgt |
44189406 |
T |
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| Q |
201 |
tttcgctctcataaagtttactgtttctttgttgtct |
237 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
44189405 |
tttcgctctcataaagtttactgtttctttgttgtct |
44189369 |
T |
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