View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2814_low_7 (Length: 485)

Name: NF2814_low_7
Description: NF2814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2814_low_7
NF2814_low_7
[»] chr3 (92 HSPs)
chr3 (227-365)||(13078165-13078303)
chr3 (227-365)||(21969159-21969297)
chr3 (227-365)||(21991595-21991733)
chr3 (227-371)||(3970487-3970631)
chr3 (227-370)||(45487830-45487973)
chr3 (226-372)||(4072268-4072415)
chr3 (227-365)||(32237396-32237534)
chr3 (227-365)||(25446280-25446418)
chr3 (265-365)||(10254638-10254738)
chr3 (227-368)||(12838108-12838249)
chr3 (227-380)||(36657420-36657573)
chr3 (265-365)||(50099503-50099603)
chr3 (227-365)||(22101195-22101334)
chr3 (227-370)||(36278753-36278896)
chr3 (227-370)||(36822757-36822900)
chr3 (227-365)||(26906485-26906623)
chr3 (265-370)||(35368802-35368907)
chr3 (265-365)||(8831810-8831910)
chr3 (226-365)||(12789636-12789775)
chr3 (227-365)||(22176139-22176278)
chr3 (227-365)||(25488343-25488481)
chr3 (227-365)||(25561042-25561180)
chr3 (268-363)||(1476555-1476650)
chr3 (227-365)||(39850346-39850485)
chr3 (227-365)||(43639083-43639222)
chr3 (265-365)||(10117585-10117680)
chr3 (226-363)||(42105387-42105524)
chr3 (265-365)||(55340295-55340395)
chr3 (226-365)||(26976844-26976983)
chr3 (227-365)||(10017145-10017278)
chr3 (227-365)||(45712905-45713043)
chr3 (265-365)||(13723990-13724089)
chr3 (265-367)||(404114-404215)
chr3 (238-365)||(10441260-10441387)
chr3 (227-370)||(26977721-26977864)
chr3 (266-363)||(297541-297638)
chr3 (265-365)||(44611384-44611483)
chr3 (266-363)||(49984001-49984098)
chr3 (227-372)||(43150511-43150654)
chr3 (271-363)||(46222032-46222124)
chr3 (269-365)||(46679334-46679430)
chr3 (238-370)||(44920644-44920775)
chr3 (227-368)||(5529922-5530064)
chr3 (226-364)||(37506130-37506267)
chr3 (314-370)||(21969275-21969331)
chr3 (314-370)||(21991711-21991767)
chr3 (314-365)||(45487801-45487852)
chr3 (314-371)||(32237512-32237569)
chr3 (314-371)||(39850463-39850520)
chr3 (314-367)||(43639200-43639253)
chr3 (314-370)||(26906451-26906507)
chr3 (227-365)||(36329190-36329320)
chr3 (314-374)||(36657551-36657611)
chr3 (314-365)||(4072392-4072443)
chr3 (314-365)||(5529893-5529944)
chr3 (314-365)||(10017116-10017167)
chr3 (314-365)||(10254570-10254621)
chr3 (314-365)||(12789608-12789659)
chr3 (314-365)||(25488459-25488510)
chr3 (314-365)||(25561013-25561064)
chr3 (314-365)||(35368551-35368602)
chr3 (314-365)||(36278874-36278925)
chr3 (314-368)||(12838076-12838130)
chr3 (314-364)||(45713021-45713071)
chr3 (314-363)||(1476669-1476718)
chr3 (314-363)||(8831744-8831793)
chr3 (266-365)||(156979-157069)
chr3 (314-365)||(3970609-3970660)
chr3 (314-365)||(10117517-10117568)
chr3 (314-365)||(10441376-10441427)
chr3 (314-365)||(36822878-36822929)
chr3 (314-365)||(38125297-38125348)
chr3 (226-362)||(46664206-46664342)
chr3 (226-304)||(38125242-38125320)
chr3 (268-329)||(39677312-39677373)
chr3 (314-365)||(13078281-13078332)
chr3 (314-365)||(43150482-43150533)
chr3 (314-372)||(36329298-36329356)
chr3 (314-363)||(26976960-26977009)
chr3 (314-365)||(404046-404097)
chr3 (314-365)||(25446253-25446302)
chr3 (314-365)||(32362863-32362914)
chr3 (314-365)||(55340412-55340463)
chr3 (267-337)||(37536941-37537011)
chr3 (314-360)||(44611499-44611545)
chr3 (265-330)||(32363123-32363188)
chr3 (314-363)||(37506244-37506293)
chr3 (314-365)||(46664178-46664229)
chr3 (326-365)||(46679291-46679330)
chr3 (314-363)||(42105501-42105550)
chr3 (265-337)||(4567250-4567322)
chr3 (314-354)||(50099445-50099485)
[»] chr8 (44 HSPs)
chr8 (226-367)||(40891043-40891184)
chr8 (227-372)||(38629505-38629650)
chr8 (265-365)||(15882270-15882370)
chr8 (265-365)||(17426630-17426730)
chr8 (227-363)||(24741827-24741963)
chr8 (227-363)||(29780963-29781099)
chr8 (227-366)||(37114269-37114408)
chr8 (227-365)||(38520049-38520187)
chr8 (227-365)||(12234497-12234636)
chr8 (227-365)||(24211280-24211418)
chr8 (266-363)||(14834676-14834770)
chr8 (266-365)||(23940806-23940905)
chr8 (227-370)||(8210354-8210497)
chr8 (269-363)||(35467243-35467337)
chr8 (227-365)||(33100647-33100785)
chr8 (266-354)||(4261989-4262077)
chr8 (265-351)||(11828612-11828698)
chr8 (227-363)||(38405169-38405305)
chr8 (226-370)||(40393753-40393896)
chr8 (313-371)||(8210319-8210377)
chr8 (314-365)||(15882202-15882253)
chr8 (314-365)||(37114240-37114291)
chr8 (314-372)||(17426748-17426806)
chr8 (319-365)||(24211401-24211447)
chr8 (277-365)||(38515585-38515673)
chr8 (314-365)||(23940923-23940974)
chr8 (314-365)||(29781077-29781128)
chr8 (294-363)||(33940706-33940774)
chr8 (314-370)||(4035738-4035794)
chr8 (270-359)||(9775206-9775297)
chr8 (267-363)||(33390717-33390813)
chr8 (226-337)||(5356153-5356265)
chr8 (314-365)||(12234468-12234519)
chr8 (314-365)||(33100763-33100814)
chr8 (314-365)||(38520020-38520071)
chr8 (314-365)||(11828721-11828772)
chr8 (267-330)||(7959857-7959920)
chr8 (266-317)||(25264277-25264328)
chr8 (314-365)||(38629476-38629527)
chr8 (268-302)||(4585595-4585629)
chr8 (333-367)||(26261500-26261534)
chr8 (314-355)||(24741941-24741982)
chr8 (314-363)||(35467175-35467224)
chr8 (337-365)||(4036570-4036598)
[»] chr1 (83 HSPs)
chr1 (227-372)||(5189500-5189645)
chr1 (368-476)||(41130739-41130847)
chr1 (231-370)||(27240921-27241060)
chr1 (226-367)||(14387015-14387156)
chr1 (227-365)||(19954913-19955051)
chr1 (226-365)||(47940572-47940712)
chr1 (266-370)||(40647188-40647292)
chr1 (227-370)||(42561292-42561435)
chr1 (227-365)||(2854534-2854672)
chr1 (227-365)||(3607731-3607869)
chr1 (227-365)||(23698504-23698642)
chr1 (227-365)||(48954216-48954354)
chr1 (227-363)||(957619-957756)
chr1 (227-365)||(9978053-9978192)
chr1 (227-365)||(15324657-15324796)
chr1 (269-375)||(36880584-36880690)
chr1 (265-363)||(49284298-49284396)
chr1 (227-365)||(1387809-1387947)
chr1 (227-365)||(2125072-2125210)
chr1 (227-365)||(19796983-19797121)
chr1 (227-365)||(50627162-50627300)
chr1 (227-365)||(51789599-51789735)
chr1 (232-365)||(27670179-27670313)
chr1 (265-365)||(26208494-26208594)
chr1 (265-365)||(27926253-27926352)
chr1 (265-365)||(50162540-50162640)
chr1 (226-338)||(6079414-6079526)
chr1 (226-365)||(21930410-21930547)
chr1 (226-363)||(27928302-27928439)
chr1 (227-365)||(51276697-51276835)
chr1 (265-363)||(50856325-50856423)
chr1 (265-345)||(4299414-4299494)
chr1 (227-363)||(22338988-22339124)
chr1 (238-345)||(48645036-48645143)
chr1 (314-374)||(19797099-19797159)
chr1 (314-365)||(5189471-5189522)
chr1 (314-365)||(9978170-9978221)
chr1 (314-365)||(49285093-49285144)
chr1 (265-363)||(16518302-16518402)
chr1 (266-323)||(29598393-29598450)
chr1 (301-365)||(362462-362526)
chr1 (267-363)||(36007824-36007920)
chr1 (314-370)||(48954332-48954388)
chr1 (314-370)||(50627128-50627184)
chr1 (314-365)||(2854650-2854701)
chr1 (314-365)||(3607847-3607898)
chr1 (314-365)||(4299513-4299564)
chr1 (314-365)||(14387133-14387184)
chr1 (314-365)||(15324628-15324679)
chr1 (314-365)||(23698620-23698671)
chr1 (314-365)||(27926370-27926421)
chr1 (314-365)||(42561413-42561464)
chr1 (314-365)||(47940689-47940740)
chr1 (314-365)||(50162657-50162708)
chr1 (315-365)||(25297966-25298016)
chr1 (238-363)||(28244000-28244119)
chr1 (309-370)||(29598450-29598511)
chr1 (227-353)||(35547714-35547840)
chr1 (314-378)||(27241042-27241106)
chr1 (314-365)||(19955029-19955080)
chr1 (314-365)||(27928416-27928467)
chr1 (314-365)||(51276813-51276864)
chr1 (314-365)||(51789713-51789764)
chr1 (227-310)||(9895284-9895367)
chr1 (265-359)||(5059568-5059664)
chr1 (225-326)||(2302432-2302533)
chr1 (314-365)||(2125188-2125239)
chr1 (314-365)||(40647118-40647169)
chr1 (314-363)||(22339102-22339151)
chr1 (227-336)||(3767687-3767795)
chr1 (266-336)||(42010431-42010501)
chr1 (320-365)||(25297924-25297968)
chr1 (267-335)||(39015225-39015293)
chr1 (314-353)||(1387793-1387831)
chr1 (314-365)||(6079386-6079437)
chr1 (314-365)||(9895255-9895306)
chr1 (314-353)||(21930394-21930433)
chr1 (314-365)||(36880291-36880342)
chr1 (267-345)||(48525943-48526020)
chr1 (319-363)||(16518424-16518468)
chr1 (267-363)||(19204037-19204133)
chr1 (267-363)||(19206447-19206543)
chr1 (265-341)||(48958233-48958308)
[»] chr7 (62 HSPs)
chr7 (227-365)||(24836051-24836189)
chr7 (227-372)||(30259061-30259206)
chr7 (227-365)||(20184240-20184379)
chr7 (227-365)||(34052310-34052448)
chr7 (227-365)||(35339280-35339418)
chr7 (227-365)||(31231616-31231756)
chr7 (238-364)||(30594735-30594861)
chr7 (227-365)||(3953044-3953182)
chr7 (227-365)||(10936472-10936610)
chr7 (227-365)||(38883252-38883390)
chr7 (232-365)||(45997510-45997643)
chr7 (227-365)||(40358146-40358287)
chr7 (265-370)||(12142262-12142367)
chr7 (265-370)||(39617838-39617943)
chr7 (226-365)||(37093798-37093937)
chr7 (227-365)||(9285716-9285854)
chr7 (227-365)||(9289783-9289921)
chr7 (266-365)||(39143714-39143813)
chr7 (226-365)||(48103398-48103534)
chr7 (265-354)||(31521538-31521627)
chr7 (227-365)||(25742437-25742571)
chr7 (226-336)||(33749673-33749784)
chr7 (265-365)||(24123757-24123857)
chr7 (227-363)||(29277869-29278004)
chr7 (314-379)||(10936588-10936653)
chr7 (267-363)||(10398390-10398486)
chr7 (298-370)||(35665630-35665702)
chr7 (314-365)||(31231734-31231785)
chr7 (314-365)||(38528530-38528581)
chr7 (315-365)||(33721829-33721879)
chr7 (265-354)||(38989084-38989173)
chr7 (314-370)||(38883218-38883274)
chr7 (314-365)||(34052281-34052332)
chr7 (314-365)||(35665734-35665785)
chr7 (266-375)||(47237425-47237526)
chr7 (265-352)||(16876470-16876558)
chr7 (314-365)||(24836022-24836073)
chr7 (314-365)||(20184357-20184408)
chr7 (314-365)||(30259184-30259235)
chr7 (314-365)||(30594695-30594746)
chr7 (314-365)||(47237546-47237597)
chr7 (316-365)||(39143826-39143875)
chr7 (314-365)||(12142194-12142245)
chr7 (322-365)||(17101656-17101699)
chr7 (322-365)||(17101700-17101743)
chr7 (314-365)||(29277840-29277891)
chr7 (314-365)||(35339396-35339447)
chr7 (271-326)||(44148722-44148777)
chr7 (314-365)||(48103370-48103421)
chr7 (273-330)||(21581183-21581240)
chr7 (267-353)||(22723240-22723328)
chr7 (314-365)||(3953160-3953211)
chr7 (314-365)||(9285832-9285883)
chr7 (314-365)||(9289899-9289950)
chr7 (314-365)||(39617960-39618010)
chr7 (319-365)||(11486866-11486912)
chr7 (314-363)||(38528394-38528443)
chr7 (283-363)||(13729605-13729685)
chr7 (267-322)||(10465153-10465208)
chr7 (314-365)||(25742549-25742600)
chr7 (266-313)||(38528464-38528511)
chr7 (314-365)||(45997626-45997677)
[»] scaffold0122 (2 HSPs)
scaffold0122 (227-365)||(45865-46003)
scaffold0122 (314-365)||(45836-45887)
[»] chr6 (40 HSPs)
chr6 (227-365)||(8091093-8091231)
chr6 (227-370)||(21379938-21380081)
chr6 (227-370)||(885416-885559)
chr6 (226-365)||(15546662-15546801)
chr6 (227-370)||(14393592-14393738)
chr6 (227-363)||(29609032-29609168)
chr6 (227-365)||(11687145-11687283)
chr6 (226-365)||(7808639-7808778)
chr6 (265-370)||(4890477-4890582)
chr6 (265-370)||(13439765-13439870)
chr6 (227-358)||(3369016-3369147)
chr6 (265-362)||(4238923-4239020)
chr6 (265-365)||(18998119-18998218)
chr6 (226-363)||(20501736-20501872)
chr6 (226-365)||(13172576-13172714)
chr6 (227-336)||(31764356-31764465)
chr6 (314-365)||(21380059-21380110)
chr6 (270-365)||(17279601-17279693)
chr6 (314-370)||(885382-885438)
chr6 (314-365)||(4890599-4890650)
chr6 (310-365)||(6433692-6433747)
chr6 (314-365)||(11687261-11687312)
chr6 (314-365)||(3368987-3369038)
chr6 (290-345)||(6433751-6433806)
chr6 (314-365)||(8091064-8091115)
chr6 (314-365)||(20501708-20501759)
chr6 (266-365)||(17367066-17367158)
chr6 (314-365)||(7808611-7808662)
chr6 (314-365)||(13439697-13439748)
chr6 (314-365)||(15546634-15546685)
chr6 (314-365)||(18998235-18998286)
chr6 (314-363)||(29609005-29609054)
chr6 (314-354)||(14393574-14393614)
chr6 (267-340)||(7187633-7187706)
chr6 (314-363)||(31764443-31764492)
chr6 (266-330)||(30905046-30905110)
chr6 (265-305)||(34522322-34522362)
chr6 (266-345)||(2599078-2599156)
chr6 (314-367)||(17279524-17279577)
chr6 (337-365)||(5416655-5416683)
[»] chr4 (59 HSPs)
chr4 (227-365)||(1298943-1299081)
chr4 (265-365)||(24915796-24915896)
chr4 (227-365)||(530671-530809)
chr4 (227-365)||(18417688-18417826)
chr4 (265-365)||(42274494-42274594)
chr4 (227-365)||(21048707-21048844)
chr4 (227-365)||(32318722-32318860)
chr4 (265-365)||(24969543-24969643)
chr4 (226-370)||(35360706-35360849)
chr4 (227-365)||(13204408-13204546)
chr4 (227-365)||(20435142-20435280)
chr4 (227-365)||(55107555-55107693)
chr4 (238-365)||(27434652-27434779)
chr4 (231-365)||(23928570-23928703)
chr4 (265-365)||(4552854-4552954)
chr4 (265-365)||(4688249-4688349)
chr4 (265-365)||(55049402-55049502)
chr4 (268-363)||(9355557-9355652)
chr4 (227-362)||(24294498-24294636)
chr4 (227-370)||(28809843-28809987)
chr4 (226-365)||(3422431-3422570)
chr4 (265-355)||(2272435-2272525)
chr4 (176-248)||(28288051-28288123)
chr4 (227-363)||(16995559-16995694)
chr4 (298-365)||(43486202-43486269)
chr4 (266-368)||(36030938-36031031)
chr4 (267-340)||(56552132-56552205)
chr4 (184-255)||(28288177-28288249)
chr4 (314-365)||(530787-530838)
chr4 (314-365)||(18417659-18417710)
chr4 (314-365)||(52824241-52824292)
chr4 (314-365)||(1298914-1298965)
chr4 (266-336)||(4895042-4895113)
chr4 (314-365)||(20435258-20435309)
chr4 (314-365)||(24969662-24969713)
chr4 (314-365)||(42274611-42274662)
chr4 (314-367)||(37525061-37525114)
chr4 (268-363)||(19600944-19601039)
chr4 (314-365)||(55107526-55107577)
chr4 (267-363)||(47452814-47452910)
chr4 (314-365)||(4552787-4552838)
chr4 (314-365)||(4688366-4688417)
chr4 (314-365)||(23928685-23928736)
chr4 (314-363)||(3422547-3422596)
chr4 (320-365)||(28573949-28573994)
chr4 (316-365)||(28809967-28810016)
chr4 (314-370)||(13204374-13204430)
chr4 (314-370)||(27434607-27434663)
chr4 (227-338)||(47465014-47465124)
chr4 (313-365)||(52587430-52587479)
chr4 (314-364)||(56552064-56552114)
chr4 (279-348)||(2990573-2990642)
chr4 (314-363)||(47465102-47465151)
chr4 (298-365)||(11330108-11330175)
chr4 (265-296)||(52587386-52587417)
chr4 (266-336)||(23481952-23482022)
chr4 (314-363)||(2272371-2272420)
chr4 (314-363)||(42020208-42020257)
chr4 (315-363)||(16995673-16995721)
[»] chr5 (60 HSPs)
chr5 (227-365)||(20476462-20476600)
chr5 (227-365)||(1138590-1138728)
chr5 (226-365)||(33629347-33629488)
chr5 (226-365)||(43539137-43539276)
chr5 (226-364)||(12807941-12808079)
chr5 (227-365)||(15855874-15856012)
chr5 (227-365)||(16472986-16473124)
chr5 (227-365)||(35420614-35420752)
chr5 (226-365)||(4266012-4266151)
chr5 (226-365)||(13754293-13754432)
chr5 (265-363)||(32623219-32623317)
chr5 (226-364)||(12744856-12744994)
chr5 (227-365)||(21259732-21259870)
chr5 (227-353)||(21261974-21262100)
chr5 (280-365)||(21591215-21591300)
chr5 (280-365)||(21595332-21595417)
chr5 (267-365)||(37552310-37552408)
chr5 (266-365)||(780796-780895)
chr5 (226-365)||(1456025-1456163)
chr5 (281-355)||(2529066-2529140)
chr5 (273-363)||(19976339-19976429)
chr5 (227-331)||(24397282-24397386)
chr5 (265-336)||(18236537-18236608)
chr5 (314-365)||(24397364-24397415)
chr5 (227-363)||(35806966-35807102)
chr5 (268-329)||(8364668-8364729)
chr5 (314-365)||(15855845-15855896)
chr5 (314-365)||(35420730-35420781)
chr5 (267-337)||(37655182-37655252)
chr5 (314-367)||(2255580-2255633)
chr5 (314-363)||(8364748-8364797)
chr5 (314-363)||(16472959-16473008)
chr5 (314-365)||(1138561-1138612)
chr5 (314-365)||(4265984-4266035)
chr5 (265-363)||(35276295-35276394)
chr5 (301-363)||(10132359-10132421)
chr5 (283-349)||(28056179-28056245)
chr5 (314-375)||(21259848-21259909)
chr5 (319-363)||(780915-780959)
chr5 (309-365)||(2268718-2268774)
chr5 (314-365)||(1164914-1164965)
chr5 (314-365)||(20476433-20476484)
chr5 (305-363)||(4913258-4913316)
chr5 (324-365)||(17583367-17583408)
chr5 (315-364)||(25751570-25751619)
chr5 (265-345)||(5144496-5144576)
chr5 (314-365)||(13754409-13754460)
chr5 (314-365)||(33629465-33629516)
chr5 (314-352)||(20464014-20464052)
chr5 (319-365)||(29141807-29141853)
chr5 (319-368)||(29141863-29141912)
chr5 (314-363)||(35806939-35806988)
chr5 (265-317)||(1164845-1164897)
chr5 (274-366)||(1384330-1384421)
chr5 (314-365)||(2268174-2268225)
chr5 (314-363)||(18236470-18236519)
chr5 (267-307)||(2538467-2538507)
chr5 (315-347)||(10499947-10499979)
chr5 (314-370)||(12807909-12807964)
chr5 (238-287)||(42522900-42522949)
[»] chr2 (56 HSPs)
chr2 (227-365)||(2818697-2818835)
chr2 (227-365)||(24101834-24101972)
chr2 (226-365)||(45408655-45408794)
chr2 (227-365)||(3116907-3117045)
chr2 (226-365)||(1923982-1924122)
chr2 (226-365)||(34490486-34490625)
chr2 (227-365)||(9933572-9933709)
chr2 (227-365)||(16705764-16705902)
chr2 (227-365)||(7737095-7737234)
chr2 (227-363)||(12850546-12850682)
chr2 (226-365)||(22269752-22269891)
chr2 (227-365)||(42713779-42713918)
chr2 (227-365)||(9281349-9281487)
chr2 (226-344)||(9850781-9850898)
chr2 (227-365)||(27920603-27920741)
chr2 (265-370)||(43476015-43476120)
chr2 (237-365)||(6605776-6605903)
chr2 (227-368)||(34455916-34456057)
chr2 (227-365)||(29229363-29229504)
chr2 (227-365)||(29342663-29342804)
chr2 (299-365)||(10552984-10553050)
chr2 (227-360)||(7116401-7116534)
chr2 (314-377)||(16705723-16705786)
chr2 (266-361)||(40362553-40362647)
chr2 (227-365)||(20892915-20893053)
chr2 (227-337)||(23835907-23836018)
chr2 (314-371)||(9281465-9281522)
chr2 (314-370)||(1924099-1924155)
chr2 (314-365)||(20892886-20892937)
chr2 (314-365)||(23835878-23835929)
chr2 (314-365)||(24101950-24102001)
chr2 (314-365)||(34455887-34455938)
chr2 (310-365)||(43858548-43858603)
chr2 (314-362)||(2818671-2818719)
chr2 (314-370)||(34490453-34490509)
chr2 (314-365)||(3116878-3116929)
chr2 (314-365)||(9933687-9933738)
chr2 (266-353)||(17500020-17500107)
chr2 (314-365)||(45408627-45408678)
chr2 (314-378)||(7737053-7737117)
chr2 (314-365)||(12850660-12850711)
chr2 (314-365)||(22269724-22269775)
chr2 (314-371)||(43475940-43475997)
chr2 (314-365)||(27920575-27920625)
chr2 (314-365)||(42713896-42713947)
chr2 (315-365)||(8111692-8111742)
chr2 (298-336)||(17434728-17434766)
chr2 (226-353)||(39242997-39243124)
chr2 (328-365)||(6605740-6605777)
chr2 (314-363)||(7116374-7116423)
chr2 (314-365)||(29229482-29229532)
chr2 (314-365)||(29342782-29342832)
chr2 (314-365)||(9850875-9850922)
chr2 (313-355)||(17434798-17434840)
chr2 (227-255)||(20892997-20893025)
chr2 (298-330)||(26274474-26274506)
[»] scaffold0188 (2 HSPs)
scaffold0188 (226-365)||(7116-7255)
scaffold0188 (314-370)||(7083-7139)
[»] scaffold0107 (2 HSPs)
scaffold0107 (227-365)||(51094-51232)
scaffold0107 (314-365)||(51065-51116)
[»] scaffold0086 (1 HSPs)
scaffold0086 (227-365)||(48157-48295)
[»] scaffold0653 (2 HSPs)
scaffold0653 (227-365)||(3395-3533)
scaffold0653 (314-365)||(3511-3562)
[»] scaffold0163 (2 HSPs)
scaffold0163 (265-365)||(1941-2041)
scaffold0163 (314-365)||(2058-2109)
[»] scaffold0137 (2 HSPs)
scaffold0137 (265-365)||(10184-10284)
scaffold0137 (314-365)||(10118-10169)
[»] scaffold0118 (2 HSPs)
scaffold0118 (226-365)||(14472-14611)
scaffold0118 (314-365)||(14444-14495)
[»] scaffold0018 (1 HSPs)
scaffold0018 (265-357)||(138287-138379)
[»] scaffold0595 (2 HSPs)
scaffold0595 (288-365)||(5797-5876)
scaffold0595 (314-370)||(5698-5754)
[»] scaffold0013 (1 HSPs)
scaffold0013 (265-330)||(94241-94306)
[»] scaffold0069 (1 HSPs)
scaffold0069 (314-365)||(26407-26458)
[»] scaffold0006 (2 HSPs)
scaffold0006 (298-361)||(72294-72357)
scaffold0006 (314-365)||(72389-72439)
[»] scaffold0004 (1 HSPs)
scaffold0004 (294-330)||(90738-90774)


Alignment Details
Target: chr3 (Bit Score: 106; Significance: 8e-53; HSPs: 92)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 13078303 - 13078165
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13078303 ttttcgtatgattcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaagaac 13078204  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  13078203 catacgaaaagcacctaaggaattgcacctaagttttct 13078165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 21969297 - 21969159
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21969297 ttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaagaac 21969198  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||||||||||||||    
T  21969197 catacgaaaagcacctaaggaattgtacctaagttttct 21969159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 21991733 - 21991595
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21991733 ttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaagaac 21991634  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||||||||||||||    
T  21991633 catacgaaaagcacctaaggaattgtacctaagttttct 21991595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 227 - 371
Target Start/End: Complemental strand, 3970631 - 3970487
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3970631 ttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaagaac 3970532  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttcttctaat 371  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||    
T  3970531 catacgaaaagcacctaaggaattgcacctaagttttctcctaat 3970487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 227 - 370
Target Start/End: Original strand, 45487830 - 45487973
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        |||||||||||| |||||||||||||| |||| || ||||||||||||||||||||||||||    
T  45487830 ttttcgtatggttcttaactaaaaatacatattttttggatataacaaacattgagaaaattatgaatttgaggaaatcatggtgaatttagttaagaac 45487929  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  45487930 catacgaaaagcacctaaggaattgtacctaagttttctcctaa 45487973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 226 - 372
Target Start/End: Complemental strand, 4072415 - 4072268
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnng-atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaaga 324  Q
    ||||||||||| |||||||||||||||||||        | ||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  4072415 tttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggattcgaggaaatcatggtgaatttagttaaga 4072316  T
Q  325 accatacgaaaagcacctaaggaattgtacctaagttttcttctaatt 372  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  4072315 accatacgaaaagcacctaagaaattgtacctaagttttctcctaatt 4072268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 32237534 - 32237396
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| ||||||| |||||||||||        |||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||    
T  32237534 ttttcgtatggttcttaattaaaaatacatattttttggatataacaaactttgagaaaattatggatctgagaaaatcatggtaaatttagttaagaac 32237435  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  32237434 catacgaaaaacacctaaggaattgtacctaagttttct 32237396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 25446280 - 25446418
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnng-atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    |||||||||| |||||||||||||||||||        | ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  25446280 ttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaa 25446379  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  25446380 ccatacgaaaagcacctaaggaattgta-ctaagttttct 25446418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 265 - 365
Target Start/End: Original strand, 10254638 - 10254738
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    ||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10254638 gatataacaaactttgaaaaaattatggatttgagaaaatcatgatgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaaattttc 10254737  T
Q  365 t 365  Q
    |    
T  10254738 t 10254738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 227 - 368
Target Start/End: Original strand, 12838108 - 12838249
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||| ||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||    
T  12838108 tttttgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaaaaac 12838207  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttcttct 368  Q
    |||||||||| ||||||| ||||||||| |||||||||||||    
T  12838208 catacgaaaaacacctaaagaattgtacataagttttcttct 12838249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 227 - 380
Target Start/End: Complemental strand, 36657573 - 36657420
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||| || |||||||| |   |||||||||||||    
T  36657573 ttttcgtatggttcttaactaaaaatacatatttttttgatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaac 36657474  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttcttctaattatattaca 380  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||| ||| ||||    
T  36657473 catacgaaaagcatctaaggaattgtacctaagttttctcctaataataataca 36657420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 265 - 365
Target Start/End: Original strand, 50099503 - 50099603
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    ||||||||||||||||||||||||||| |||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50099503 gatataacaaactttgagaaaattatgaatttgaggaaattatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 50099602  T
Q  365 t 365  Q
    |    
T  50099603 t 50099603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 22101195 - 22101334
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnng-atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    |||||||||| |||||||||||||||||||        | ||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||    
T  22101195 ttttcgtatggttcttaactaaaaatacatattttgttggatataacaaactttgagaaaattatggatttgaggaaatcatagtgaatttagttaagaa 22101294  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||| | ||||||||||||||||||||||||    
T  22101295 ccatacgaaaagctcataaggaattgtacctaagttttct 22101334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 227 - 370
Target Start/End: Complemental strand, 36278896 - 36278753
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||| ||        ||||||||||||||||||||||||||| |||| || ||||||| ||||||||||||||||||    
T  36278896 ttttcgtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaagaac 36278797  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    ||||||||||| | ||||||||||||||||||||||||| ||||    
T  36278796 catacgaaaagtatctaaggaattgtacctaagttttctcctaa 36278753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 227 - 370
Target Start/End: Complemental strand, 36822900 - 36822757
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        |||||||||||||||||||||||||||||| | || ||||||||||   |||||||||||||    
T  36822900 ttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatctgaggaaatcatggtatttttagttaagaac 36822801  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||    
T  36822800 catacgaaaagcagctaaggaattgtacctaagttttctcctaa 36822757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 26906485 - 26906623
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||| ||        ||||||||||||||||||||||||||| |||| || ||||||| ||||||||||||||||||    
T  26906485 ttttcgtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaagaac 26906584  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  26906585 catacgaaaagtatctaaggaattgtacctaagttttct 26906623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 265 - 370
Target Start/End: Original strand, 35368802 - 35368907
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||| |||| ||||||||||||||||||    
T  35368802 gatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaaaaaccatacgaaaaacacataagaaattgtacctaagttttc 35368901  T
Q  365 ttctaa 370  Q
    | ||||    
T  35368902 tcctaa 35368907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 265 - 365
Target Start/End: Original strand, 8831810 - 8831910
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    |||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  8831810 gatataacaaactttgagaaaattatggatttgaagaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaaaaattgtacctaagttttc 8831909  T
Q  365 t 365  Q
    |    
T  8831910 t 8831910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 226 - 365
Target Start/End: Original strand, 12789636 - 12789775
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    ||||||||||| |||||||||||||||||||        ||||||||||||||||| ||||||||| |||| || ||||||||||||||||| |||||||    
T  12789636 tttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgaaaaaattatgaatttgaggaaatcatggtgaatttaattaagaa 12789735  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||| |||||||||||||||||| |||| |||||||||    
T  12789736 ccatacaaaaagcacctaaggaattctaccaaagttttct 12789775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 22176139 - 22176278
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnng-atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    |||||||||| |||||||||||||||||||        | |||| |||||||||||||||||||||||||| || ||||||| |||||||||||||||||    
T  22176139 ttttcgtatggttcttaactaaaaatacatattttgttggatattacaaactttgagaaaattatggatttgaggaaatcatagtgaatttagttaagaa 22176238  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  22176239 ccatacaaaaagcacataaggaattgtacctaagttttct 22176278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 25488481 - 25488343
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||| ||||| |||||||||||||||||||        |||||||||||||||||||||||||||||| | |  ||||||||||||||||||||||||||    
T  25488481 tttttgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatatgaagaaatcatggtgaatttagttaagaac 25488382  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
     ||||||||||||||||||||||||||| |||| |||||    
T  25488381 tatacgaaaagcacctaaggaattgtacttaagatttct 25488343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 25561042 - 25561180
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||| ||||| |||||||||||||||||||        |||||||||||||||||||||||||||||| | |  ||||||||||||||||||||||||||    
T  25561042 tttttgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatatgaagaaatcatggtgaatttagttaagaac 25561141  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
     ||||||||||||||||||||||||||| |||| |||||    
T  25561142 tatacgaaaagcacctaaggaattgtacttaagatttct 25561180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 268 - 363
Target Start/End: Complemental strand, 1476650 - 1476555
Alignment:
Q  268 ataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||    
T  1476650 ataacaaactttgagagaattatggatttaaggaaatcatggtgaatttaggttagaaccataccaaaagcacctaaggaattgtacctaagtttt 1476555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 39850485 - 39850346
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactt-tgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    ||||||||||||||||||||||||||| ||        |||||||||||||| |||||||||||||||||| || ||||||||||   ||||||||||||    
T  39850485 ttttcgtatgattcttaactaaaaatatatattttttggatataacaaacttgtgagaaaattatggatttgaggaaatcatggtatttttagttaagaa 39850386  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||| |||||||||||| |||||||||||||||    
T  39850385 ccatacgaaaaacacctaaggaatagtacctaagttttct 39850346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 43639222 - 43639083
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnng-atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    ||||||||||||||||||||||||||| ||        | ||||||||||||||||||||||||||||||| |  |||||||||||||||| ||||||||    
T  43639222 ttttcgtatgattcttaactaaaaatatatatttttttggatataacaaactttgagaaaattatggatttgaagaaatcatggtgaatttggttaagaa 43639123  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
     |||||||||||||||||||||||| || |||||||||||    
T  43639122 tcatacgaaaagcacctaaggaattataactaagttttct 43639083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 265 - 365
Target Start/End: Original strand, 10117585 - 10117680
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    |||||||||||||||||||||||||||||||| |||||||     ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10117585 gatataacaaactttgagaaaattatggatttgagaaaat-----tgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaaattttc 10117679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 226 - 363
Target Start/End: Complemental strand, 42105524 - 42105387
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    ||||| ||||| ||||||||||||||||||         || |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  42105524 ttttttgtatggttcttaactaaaaatacaatttttttagagataacaaactttgagagaattatggatttaagaaaatcacggtgaatttagttaagaa 42105425  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||| |||||| ||||| | |||||||||||||||||    
T  42105424 ccataagaaaagtacctatgaaattgtacctaagtttt 42105387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 265 - 365
Target Start/End: Complemental strand, 55340395 - 55340295
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||| ||| |||| |||||||||||| |||||    
T  55340395 gatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatatagttaagaatcatacgaaaaacacataagaaattgtacctaaattttc 55340296  T
Q  365 t 365  Q
    |    
T  55340295 t 55340295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 226 - 365
Target Start/End: Complemental strand, 26976983 - 26976844
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    ||||||||||| || ||||||||||||| |||       |||| || |||||||||||||||||||||||| ||||||||||  | |||||| |||||||    
T  26976983 tttttcgtatggtttttaactaaaaatatatctttttacgatacaataaactttgagaaaattatggatttgagaaaatcatactaaatttaattaagaa 26976884  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    | |||||||||||||||||| |||||||||||||||||||    
T  26976883 ctatacgaaaagcacctaagaaattgtacctaagttttct 26976844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 10017145 - 10017278
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    ||||| |||| |||||||||||||||||||        ||||||||||||||||| |||||||||||||| ||||||||||| ||||||     ||||||    
T  10017145 ttttcatatggttcttaactaaaaatacatattttttggatataacaaactttgaaaaaattatggatttgagaaaatcatgatgaatt-----aagaac 10017239  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  10017240 catacgaaaagcacctaaggaattgtacctaaattttct 10017278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 45713043 - 45712905
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||| ||||||||||||||        ||||||||||||||||| |||||||||| ||| || |||||||||||||||||||||||||     
T  45713043 ttttcgtatggttctaaactaaaaatacatattttttggatataacaaactttgataaaattatggctttgaggaaatcatggtgaatttagttaagaaa 45712944  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
     | |  |||||||||||||||||||||||||||||||||    
T  45712943 aaaaaaaaaagcacctaaggaattgtacctaagttttct 45712905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 265 - 365
Target Start/End: Complemental strand, 13724089 - 13723990
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    ||||||||||||||||||||||||||| |||| |  |||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||    
T  13724089 gatataacaaactttgagaaaattatgaatttgaagaaatcatggtgaatttag-taagaaccatacaaaaagcacctaagaaattgtacctaagttttc 13723991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 265 - 367
Target Start/End: Original strand, 404114 - 404215
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    |||||||||||||||||||||||||| || || || |||||||||||||||||||||||||||||||| |||||| |||| |||||||| ||||||||||    
T  404114 gatataacaaactttgagaaaattatagacttgaggaaatcatggtgaatttagttaagaaccatacggaaagcatctaaagaattgta-ctaagttttc 404212  T
Q  365 ttc 367  Q
    |||    
T  404213 ttc 404215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 238 - 365
Target Start/End: Complemental strand, 10441387 - 10441260
Alignment:
Q  238 ttcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaag 337  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||||||| || |||||||| |   |||||||||||| ||||| |||||    
T  10441387 ttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaatcataccaaaag 10441288  T
Q  338 cacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||| ||||||||||    
T  10441287 cacctaaggaattgtacttaagttttct 10441260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 227 - 370
Target Start/End: Original strand, 26977721 - 26977864
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| || |||||||||||||||||       |||| || |||||||||||||||||||||||| || |||||||  | |||||||||||||||    
T  26977721 ttttcgtatggtttttaactaaaaatacatctttttatgatacaataaactttgagaaaattatggatttgaggaaatcatactaaatttagttaagaac 26977820  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    |||| |||||| | ||||| ||||||||||||||||||| ||||    
T  26977821 catatgaaaagtatctaagaaattgtacctaagttttctcctaa 26977864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 266 - 363
Target Start/End: Complemental strand, 297638 - 297541
Alignment:
Q  266 atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    |||||||||||| |||||||||||||||||| |||||||  | || ||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  297638 atataacaaactatgagaaaattatggatttcagaaaattgtagtaaatttagctaagaaccatacgaaaagcaccaaaggaattgtacctaagtttt 297541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 265 - 365
Target Start/End: Complemental strand, 44611483 - 44611384
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    ||||||||||||||||||||||||||| |||| |  |||||||||||||||||||||||||| |||| ||||| ||||||||||||||| ||||||||||    
T  44611483 gatataacaaactttgagaaaattatgaatttgaagaaatcatggtgaatttagttaagaactatacaaaaagtacctaaggaattgta-ctaagttttc 44611385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 266 - 363
Target Start/End: Original strand, 49984001 - 49984098
Alignment:
Q  266 atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    |||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||  |||| ||||||||||||    
T  49984001 atataataaattttgaaaaaattatggatttaagaaaatcatggtgaatttagttaagaatcgtacgaaaagtacctaaaaaattatacctaagtttt 49984098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 227 - 372
Target Start/End: Original strand, 43150511 - 43150654
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| || ||||||||||||||||        ||||||||||||||||||||||||||| |||| || ||||||| |||||||||||||||||     
T  43150511 ttttcgtatggtttttaactaaaaatacatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaagaat 43150610  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttcttctaatt 372  Q
    |||||| |||||| ||| |||||| || ||||||||||| ||||||    
T  43150611 catacg-aaagcatctatggaattcta-ctaagttttctcctaatt 43150654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 271 - 363
Target Start/End: Complemental strand, 46222124 - 46222032
Alignment:
Q  271 acaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    |||||||  |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||| ||| |||||    
T  46222124 acaaactaagagaaaattatgaatttaagaaaatcatggtgaatttagttaaaaaccatacgaaaaacacctaagaaattgtaactaggtttt 46222032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 269 - 365
Target Start/End: Original strand, 46679334 - 46679430
Alignment:
Q  269 taacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||| || |||| |||||||||||||||||||||| ||  ||||||| | |||||||||||| ||||||||||    
T  46679334 taacaaactttgagaaaattatggatttgaggaaattatggtgaatttagttaagaaccgtataaaaagcatccaaggaattgtacttaagttttct 46679430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 238 - 370
Target Start/End: Complemental strand, 44920775 - 44920644
Alignment:
Q  238 ttcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaag 337  Q
    |||||||||||||||||||        ||||||| ||||||||||||||||||  |||| |||||||||| || ||||||||||||||||||| ||||||    
T  44920775 ttcttaactaaaaatacatattttttggatataataaactttgagaaaattataaatttgagaaaatcattgtaaatttagttaagaaccataagaaaag 44920676  T
Q  338 cacctaaggaattgtacctaagttttcttctaa 370  Q
    || |||||||||||||  ||| |||||||||||    
T  44920675 ca-ctaaggaattgtatttaaattttcttctaa 44920644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 227 - 368
Target Start/End: Original strand, 5529922 - 5530064
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnng-atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    |||||||||| |||||||||||||||||||        | ||||| ||||||||||||||||||| |||||||  ||||||||||   ||||||||| ||    
T  5529922 ttttcgtatggttcttaactaaaaatacatatttttttggatatatcaaactttgagaaaattatagatttaaagaaatcatggtatttttagttaataa 5530021  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttcttct 368  Q
    ||||||||||||||| |||| |||||||||||| |||| ||||    
T  5530022 ccatacgaaaagcacttaagaaattgtacctaaattttattct 5530064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 226 - 364
Target Start/End: Complemental strand, 37506267 - 37506130
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    |||||||| || |||||||||||||||||||        || |||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||    
T  37506267 tttttcgtgtggttcttaactaaaaatacattttttttggagataacaaactttgagaaaattatgaatttaagaaaatcat-gtaaatttagttaagaa 37506169  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    |||||  |||| ||| |||||| ||| || |||||||||    
T  37506168 ccatagaaaaaacacttaaggagttgcacttaagttttc 37506130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 314 - 370
Target Start/End: Original strand, 21969275 - 21969331
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21969275 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcctaa 21969331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 314 - 370
Target Start/End: Original strand, 21991711 - 21991767
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21991711 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcctaa 21991767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 45487852 - 45487801
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45487852 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 45487801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 314 - 371
Target Start/End: Original strand, 32237512 - 32237569
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaat 371  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  32237512 tttaattaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcctaat 32237569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 314 - 371
Target Start/End: Original strand, 39850463 - 39850520
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaat 371  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  39850463 tttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttttctcctaat 39850520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 314 - 367
Target Start/End: Original strand, 43639200 - 43639253
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttc 367  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  43639200 tttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttttcttc 43639253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 314 - 370
Target Start/End: Complemental strand, 26906507 - 26906451
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  26906507 tttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttctcctaa 26906451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 36329320 - 36329190
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||| || ||        ||||||| ||||||||    
T  36329320 ttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaa--------gaatttatttaagaac 36329229  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
     |||| ||||| | ||||| |||||||||||||||||||    
T  36329228 aatacaaaaagtatctaagaaattgtacctaagttttct 36329190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 314 - 374
Target Start/End: Original strand, 36657551 - 36657611
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaattat 374  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||    
T  36657551 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctccttattat 36657611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 4072392 - 4072443
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4072392 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttct 4072443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 5529944 - 5529893
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5529944 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttct 5529893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 10017167 - 10017116
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10017167 tttagttaagaaccatatgaaaagcacctaaggaattgtacctaagttttct 10017116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 10254621 - 10254570
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10254621 tttagttaagaaccatatgaaaagcacctaaggaattgtacctaagttttct 10254570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 12789659 - 12789608
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12789659 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttct 12789608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 25488459 - 25488510
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25488459 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttct 25488510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 25561064 - 25561013
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25561064 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttct 25561013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 35368602 - 35368551
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35368602 tttagttaagaaccatacgaaaagcacataaggaattgtacctaagttttct 35368551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 36278874 - 36278925
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36278874 tttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttct 36278925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 314 - 368
Target Start/End: Complemental strand, 12838130 - 12838076
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttct 368  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  12838130 tttagttaagaaccatacaaaaagcacctaaggaattgtacataagttttcttct 12838076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 45713021 - 45713071
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  45713021 tttagtttagaaccatacgaaaagcacctaaggaattgtacctaagttttc 45713071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 314 - 363
Target Start/End: Original strand, 1476669 - 1476718
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1476669 tttagttaagaaccatatgaaaagcacctaaggaattgtacctaagtttt 1476718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 314 - 363
Target Start/End: Complemental strand, 8831793 - 8831744
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8831793 tttagtttagaaccatacgaaaagcacctaaggaattgtacctaagtttt 8831744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 266 - 365
Target Start/End: Complemental strand, 157069 - 156979
Alignment:
Q  266 atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||||||| || |||| ||| | ||||||||||||||||         |||||||||||||||||| ||||||||||    
T  157069 atataacaaactttgagaaaattatggatttgaggaaattatgataaatttagttaagaacc---------gcacctaaggaattgtacttaagttttct 156979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 3970609 - 3970660
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  3970609 tttagttaagaaccatacgaaaagtacctaagaaattgtacctaagttttct 3970660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 10117568 - 10117517
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  10117568 tttagttaagaaccatatgaaaagcacctaaggaactgtacctaagttttct 10117517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 10441376 - 10441427
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  10441376 tttagttaagaaccgtaccaaaagcacctaaggaattgtacctaagttttct 10441427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 36822878 - 36822929
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  36822878 tttagttaagaaccatacgaaaagcacctaaaaaattgtacctaagttttct 36822929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 38125297 - 38125348
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  38125297 tttagttaagaaccatacgaaaaacacctaatgaattgtacctaagttttct 38125348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 226 - 362
Target Start/End: Original strand, 46664206 - 46664342
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    ||||||||||  |||||||||||||||||||         |||||||||||||||||||||||||| |||| || |||| ||| |   |||  |||| ||    
T  46664206 tttttcgtatagttcttaactaaaaatacatatttttttaatataacaaactttgagaaaattatgaatttgaggaaattatgatattttttattaaaaa 46664305  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttt 362  Q
     |||||||||||||||||| ||||||||| |||||||    
T  46664306 tcatacgaaaagcacctaaagaattgtacataagttt 46664342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 226 - 304
Target Start/End: Complemental strand, 38125320 - 38125242
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaat 304  Q
    ||||||||||| |||||||||||||||||||         |||||||||||||| ||||||||||||||||||||||||    
T  38125320 tttttcgtatggttcttaactaaaaatacatattttttgtatataacaaactttaagaaaattatggatttaagaaaat 38125242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 329
Target Start/End: Complemental strand, 39677373 - 39677312
Alignment:
Q  268 ataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccat 329  Q
    |||||||||||||| ||||||||| |||| |||||||||| ||||||||| |||||||||||    
T  39677373 ataacaaactttgaaaaaattatgaatttgagaaaatcatagtgaatttaattaagaaccat 39677312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 13078281 - 13078332
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||||||||||    
T  13078281 tttagttaagaatcatacgaaaagtacctaagaaattgtacctaagttttct 13078332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 43150533 - 43150482
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||| ||||||||||||||||||| |||||||| |||||||||||||    
T  43150533 tttagttaaaaaccatacgaaaagcacctgaggaattgcacctaagttttct 43150482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 314 - 372
Target Start/End: Original strand, 36329298 - 36329356
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaatt 372  Q
    ||||||||||||||||||||||||||||||| |||||||| |||  |||||| ||||||    
T  36329298 tttagttaagaaccatacgaaaagcacctaaagaattgtagctaccttttctcctaatt 36329356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 314 - 363
Target Start/End: Original strand, 26976960 - 26977009
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||||||||||    
T  26976960 tttagttaaaaaccatacgaaaaacacctaaagaattgtacctaagtttt 26977009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 404097 - 404046
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||| || ||||||||||||||||||| |||||||| ||||||||||    
T  404097 tttagttaaaaatcatacgaaaagcacctaagaaattgtacgtaagttttct 404046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 25446302 - 25446253
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  25446302 tttagttaagaaccatacgaaaagca-ctaaggaattgta-ctaagttttct 25446253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 32362914 - 32362863
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||| ||||||| ||||||||  ||||||||||    
T  32362914 tttagttaagaaccatacgaaaaacacctaaagaattgtagttaagttttct 32362863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 55340412 - 55340463
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||| |||||  ||||||||||||||| |||||||||||    
T  55340412 tttagttaagaaccatatgaaaaatacctaaggaattgtatctaagttttct 55340463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 337
Target Start/End: Original strand, 37536941 - 37537011
Alignment:
Q  267 tataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaag 337  Q
    |||||||||||||||||||||||||||||  || |||| ||    |||||||||||||||||||| |||||    
T  37536941 tataacaaactttgagaaaattatggattagaggaaattataaataatttagttaagaaccatacaaaaag 37537011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 360
Target Start/End: Original strand, 44611499 - 44611545
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagt 360  Q
    ||||||||| |||||||| |||| |||||||||||||||||||||||    
T  44611499 tttagttaaaaaccatacaaaaaacacctaaggaattgtacctaagt 44611545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 32363123 - 32363188
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccata 330  Q
    ||||||||||| ||| | |||||||||||||| ||||||| || || ||||||||||| |||||||    
T  32363123 gatataacaaatttttaaaaaattatggatttgagaaaattattgtaaatttagttaataaccata 32363188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 314 - 363
Target Start/End: Original strand, 37506244 - 37506293
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||||||||||||| ||||||| ||||||| ||||||||| ||||||||    
T  37506244 tttagttaagaaccacacgaaaaacacctaaagaattgtacataagtttt 37506293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 46664229 - 46664178
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||| |||||||||  ||||||| |||||||||||| ||||||    
T  46664229 tttagttaagaactatacgaaaaatacctaagaaattgtacctaaattttct 46664178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 365
Target Start/End: Complemental strand, 46679330 - 46679291
Alignment:
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  46679330 ccatacgcaaagcacttaaggaattgtacctaagttttct 46679291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 363
Target Start/End: Original strand, 42105501 - 42105550
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    |||||||||||||||||| |||| |||||| | |||||||| ||||||||    
T  42105501 tttagttaagaaccatacaaaaaacacctacgaaattgtacttaagtttt 42105550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 337
Target Start/End: Original strand, 4567250 - 4567322
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaag 337  Q
    |||||||||||| |||||||||  ||| |||| || ||| | || | ||||||| ||||||||||||||||||    
T  4567250 gatataacaaacattgagaaaaccatgaatttgaggaaaccgtgatcaatttaggtaagaaccatacgaaaag 4567322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 50099485 - 50099445
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtac 354  Q
    |||| |||| ||||||||||||||||||||| |||||||||    
T  50099485 tttaattaaaaaccatacgaaaagcacctaacgaattgtac 50099445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 7e-50; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 226 - 367
Target Start/End: Original strand, 40891043 - 40891184
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    ||||||||| | |||||||||||||||||||        |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  40891043 tttttcgtacggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaa 40891142  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttcttc 367  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  40891143 ccatacgaaaagcacctaaggaattgtacctaagttttcttc 40891184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 227 - 372
Target Start/End: Original strand, 38629505 - 38629650
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        ||||||| ||||||||||||||||||| |||| || ||||||||||||||||||||||||||    
T  38629505 ttttcgtatggttcttaactaaaaatacatattttttggatataataaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaagaac 38629604  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttcttctaatt 372  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||    
T  38629605 catacgaaaaacacctaaggaattgtacctaagttttctcctaatt 38629650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 265 - 365
Target Start/End: Original strand, 15882270 - 15882370
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    |||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15882270 gatataactaactttgagaatattatggatttgagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 15882369  T
Q  365 t 365  Q
    |    
T  15882370 t 15882370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 265 - 365
Target Start/End: Complemental strand, 17426730 - 17426630
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    |||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17426730 gatataacaaactttgagaaaattatagatttgaggaaatcatggtgaatttagttaagaaccatacgaaaagcacctaatgaattgtacctaagttttc 17426631  T
Q  365 t 365  Q
    |    
T  17426630 t 17426630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 227 - 363
Target Start/End: Complemental strand, 24741963 - 24741827
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||| |        |||||| ||||| ||||||||| |||||||| || ||||||||||||||||||||||||||    
T  24741963 ttttcgtatggttcttaactaaaaatacacctatgttgcatataataaactctgagaaaatcatggatttgaggaaatcatggtgaatttagttaagaac 24741864  T
Q  327 catacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    |||||||||||||||||||||||||||||||||||||    
T  24741863 catacgaaaagcacctaaggaattgtacctaagtttt 24741827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 227 - 363
Target Start/End: Complemental strand, 29781099 - 29780963
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||| || |||| ||||| ||||||||||| |||    
T  29781099 ttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaattatggtaaatttagttaaaaac 29781000  T
Q  327 catacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    |||||||||||||||||||||||||||||||| ||||    
T  29780999 catacgaaaagcacctaaggaattgtacctaaatttt 29780963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 227 - 366
Target Start/End: Original strand, 37114269 - 37114408
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| ||||||| |||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37114269 ttttcgtatggttcttaattaaaaatacatattttttggatataataaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 37114368  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttctt 366  Q
    ||||| |||| || |||| ||||||||||||| |||||||    
T  37114369 catacaaaaaacatctaaagaattgtacctaaattttctt 37114408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 38520049 - 38520187
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||| ||        ||||||||||||||||||||||||||| |||| || |||||||||||||||||||||| ||     
T  38520049 ttttcgtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaaaaaa 38520148  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  38520149 catacgaaaagcacttaaggaattgtacctaagttttct 38520187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 12234497 - 12234636
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaa-ctttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    |||||||||| |||||||||||||||||||        ||||||||||| |||||||||||||||| |||| || ||||||| |||||||||||||| ||    
T  12234497 ttttcgtatggttcttaactaaaaatacatattttttggatataacaaaactttgagaaaattatgaatttgaggaaatcatcgtgaatttagttaataa 12234596  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||| ||||| |||||||||||||||||||    
T  12234597 ccatacgaaaagcatctaagaaattgtacctaagttttct 12234636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 24211418 - 24211280
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| ||||||| || ||||||||        ||||||||||||| ||||||||||||||| ||||| |||| | |||||||||| ||||||||    
T  24211418 ttttcgtatggttcttaaatagaaatacatattttttagatataacaaactatgagaaaattatggaattaaggaaattacggtgaatttaattaagaac 24211319  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  24211318 catacgaaaagcacctaaagaattgtacctaagttttct 24211280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 266 - 363
Target Start/End: Complemental strand, 14834770 - 14834676
Alignment:
Q  266 atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||||||||||||||   ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  14834770 atataacaaactttga---aattatgaatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacgtaaggaattgtacgtaagtttt 14834676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 266 - 365
Target Start/End: Complemental strand, 23940905 - 23940806
Alignment:
Q  266 atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||| |||||||||||||| |||| ||||||||| |||||||||    
T  23940905 atataacaaactttgagaaaattacggatttgaggaaatcatggtgaatttagttaagaatcatacgaaaagcacttaagaaattgtaccgaagttttct 23940806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 227 - 370
Target Start/End: Original strand, 8210354 - 8210497
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    ||||||||||||||||||||||| ||| ||        |||||||||||||||||||||||||||||||| || |||||||| ||||||| ||||||||     
T  8210354 ttttcgtatgattcttaactaaatatatatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatgatgaatttggttaagaat 8210453  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    ||||| |||| || |||||||||||||| |||||||||| ||||    
T  8210454 catacaaaaaacatctaaggaattgtacttaagttttctcctaa 8210497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 269 - 363
Target Start/End: Original strand, 35467243 - 35467337
Alignment:
Q  269 taacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||||||||| ||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  35467243 taacaaactttaagaaaattatggatttaaagaaatcatgatgaatttagttaagaaccatacgaaaagcacataaggaattgtacgtaagtttt 35467337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 33100785 - 33100647
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||| | |||||||||||||| ||||        |||||||||||||||||||||||||||||||| || |||| | |||   |||||||||||||    
T  33100785 ttttcgtacggttcttaactaaaaaaacatatttttttgatataacaaactttgagaaaattatggatttgaggaaataacggtatttttagttaagaac 33100686  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  33100685 catacgaaaagcacctaagaaattgtacctaagttttct 33100647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 266 - 354
Target Start/End: Complemental strand, 4262077 - 4261989
Alignment:
Q  266 atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtac 354  Q
    |||||||||||||||||||||||||||| || || ||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  4262077 atataacaaactttgagaaaattatggacttgaggaaatcatagtgaatttagttaagaaccatacgaaaagcacctaaagaattgtac 4261989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 265 - 351
Target Start/End: Complemental strand, 11828698 - 11828612
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattg 351  Q
    ||||||||||||||||||||||| |||||||| || |||| ||||||||||||||||||||||||||||||| |||||||| |||||    
T  11828698 gatataacaaactttgagaaaataatggatttgaggaaattatggtgaatttagttaagaaccatacgaaaaacacctaagaaattg 11828612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 227 - 363
Target Start/End: Original strand, 38405169 - 38405305
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnng-atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    |||| ||||| ||||||||||||||||||||       | |||||||||||||||||||||||| | |||||||||||||||  ||||||||||||||||    
T  38405169 tttttgtatggttcttaactaaaaatacatctttttttggatataacaaactttgagaaaattacgaatttaagaaaatcattatgaatttagttaagaa 38405268  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    |||||| |||| ||| |||| ||||||| |||||||||    
T  38405269 ccatacaaaaaacacataagaaattgta-ctaagtttt 38405305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 226 - 370
Target Start/End: Original strand, 40393753 - 40393896
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    |||||| ||||||||||||||||||||||||        ||||||||||| |||||||||||||   |||| || |||| ||||||||||||| ||||||    
T  40393753 tttttcttatgattcttaactaaaaatacatatttttgggatataacaaattttgagaaaattaaa-atttgaggaaattatggtgaatttagctaagaa 40393851  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    |||||  ||||||||||||| |||||| | |||||||||| ||||    
T  40393852 ccataataaaagcacctaagaaattgtgcttaagttttctcctaa 40393896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 313 - 371
Target Start/End: Complemental strand, 8210377 - 8210319
Alignment:
Q  313 atttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaat 371  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  8210377 atttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttttctcctaat 8210319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 15882253 - 15882202
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15882253 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttct 15882202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 37114291 - 37114240
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  37114291 tttaattaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 37114240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 314 - 372
Target Start/End: Original strand, 17426748 - 17426806
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaatt 372  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  17426748 tttagttaagaaccatacgaaaagcacctaaaaaattgtacctaagttttctcctaatt 17426806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 365
Target Start/End: Original strand, 24211401 - 24211447
Alignment:
Q  319 ttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  24211401 ttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 24211447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 365
Target Start/End: Original strand, 38515585 - 38515673
Alignment:
Q  277 tttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||| || ||||||| ||   |||| |||| ||||| |||||| ||| |||||||||||||||||||||||||    
T  38515585 tttgagaaaattatggatttgaggaaatcattgtatttttaattaaaaaccacacgaaatgcatctaaggaattgtacctaagttttct 38515673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 23940923 - 23940974
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  23940923 tttagttaaaaaccatacgaaaagcacctaaggaattgtaactaagttttct 23940974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 29781077 - 29781128
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  29781077 tttagttaagaaccatacgaaaagcatctaaggaattggacctaagttttct 29781128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 363
Target Start/End: Original strand, 33940706 - 33940774
Alignment:
Q  294 tttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||||||||||||||| ||||||||||||||||||  || || |||||||||||||||| |||||||||    
T  33940706 tttaagaaaatcatggtaaatttagttaagaaccatgtgacaaacacctaaggaattgta-ctaagtttt 33940774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 314 - 370
Target Start/End: Complemental strand, 4035794 - 4035738
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    |||||||||| |||||||||||||||||| ||||| |||||||||||||||| ||||    
T  4035794 tttagttaagtaccatacgaaaagcacctgaggaactgtacctaagttttctcctaa 4035738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 359
Target Start/End: Complemental strand, 9775297 - 9775206
Alignment:
Q  270 aacaaactttgagaaaattatggatttaagaaaatcatggtgaatt--tagttaagaaccatacgaaaagcacctaaggaattgtacctaag 359  Q
    |||||||||||||||||||||| |||| |||||||  |||||||||  || |||| || |||||||||||||  ||||||||| ||||||||    
T  9775297 aacaaactttgagaaaattatgaatttgagaaaattttggtgaatttataattaaaaatcatacgaaaagcatataaggaattatacctaag 9775206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 267 - 363
Target Start/End: Original strand, 33390717 - 33390813
Alignment:
Q  267 tataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    |||||| ||||||||||||||| || |||| || ||||| ||   ||||||| ||| ||||||| ||||||||||||||||| || |||||||||||    
T  33390717 tataacgaactttgagaaaattgtgaatttgaggaaatcgtgagtaatttagctaaaaaccatatgaaaagcacctaaggaaatgcacctaagtttt 33390813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 226 - 337
Target Start/End: Complemental strand, 5356265 - 5356153
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaatt-atggatttaagaaaatcatggtgaatttagttaaga 324  Q
    ||||||||||||||||||| |||||||||||          ||||| ||||||| | |||| | |||||||||||||||| |||||||||||||| ||||    
T  5356265 tttttcgtatgattcttaattaaaaatacatattttttaattataataaactttaaaaaaaatgatggatttaagaaaattatggtgaatttagtcaaga 5356166  T
Q  325 accatacgaaaag 337  Q
    ||||| |||||||    
T  5356165 accatgcgaaaag 5356153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 12234519 - 12234468
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||| || ||||| ||||||||||||||    
T  12234519 tttagttaagaaccatacgaaaagcacccaaagaattatacctaagttttct 12234468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 33100763 - 33100814
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||| |||||||||||| |||| |||||||||||||||||||    
T  33100763 tttagttaagaaccgtacgaaaagcacataagaaattgtacctaagttttct 33100814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 38520071 - 38520020
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||| |||||||||| ||||||| ||||||    
T  38520071 tttagttaagaaccatacgaaaagcaactaaggaattatacctaaattttct 38520020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 11828721 - 11828772
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||| ||| ||||||||  ||||||||||||||||||||||||    
T  11828721 tttagttaagaacgatatgaaaagcaagtaaggaattgtacctaagttttct 11828772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 330
Target Start/End: Complemental strand, 7959920 - 7959857
Alignment:
Q  267 tataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccata 330  Q
    ||||||||||||||||| || ||| ||||| || ||||||| |  |||||||||||||||||||    
T  7959920 tataacaaactttgagacaactatagattttaggaaatcatagcaaatttagttaagaaccata 7959857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 317
Target Start/End: Complemental strand, 25264328 - 25264277
Alignment:
Q  266 atataacaaactttgagaaaattatggatttaagaaaatcatggtgaattta 317  Q
    |||||||||||||| ||||||||||| |||| || ||||||| |||||||||    
T  25264328 atataacaaactttaagaaaattatgaatttgaggaaatcattgtgaattta 25264277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 38629527 - 38629476
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||  ||| ||||||||| ||| ||||||    
T  38629527 tttagttaagaaccatacgaaaagcatttaaagaattgtacttaaattttct 38629476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 302
Target Start/End: Complemental strand, 4585629 - 4585595
Alignment:
Q  268 ataacaaactttgagaaaattatggatttaagaaa 302  Q
    |||||||||||||| ||||||||||||||||||||    
T  4585629 ataacaaactttgaaaaaattatggatttaagaaa 4585595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 367
Target Start/End: Complemental strand, 26261534 - 26261500
Alignment:
Q  333 aaaagcacctaaggaattgtacctaagttttcttc 367  Q
    ||||||| |||||||||||||||||||||||||||    
T  26261534 aaaagcatctaaggaattgtacctaagttttcttc 26261500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 355
Target Start/End: Original strand, 24741941 - 24741982
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacc 355  Q
    ||||||||||||||||||||||| ||||| | ||||||||||    
T  24741941 tttagttaagaaccatacgaaaatcacctcaagaattgtacc 24741982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 363
Target Start/End: Complemental strand, 35467224 - 35467175
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||||||||||||| || ||||| | |||| ||||||||||||||||||    
T  35467224 tttagttaagaaccacacaaaaagtatctaaagaattgtacctaagtttt 35467175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 365
Target Start/End: Original strand, 4036570 - 4036598
Alignment:
Q  337 gcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||||    
T  4036570 gcacctaaggaattgtacctaagttttct 4036598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 7e-50; HSPs: 83)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 227 - 372
Target Start/End: Original strand, 5189500 - 5189645
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5189500 ttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaagaac 5189599  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttcttctaatt 372  Q
    ||||||||||||| |||||||||||||||||| |||||||| ||||    
T  5189600 catacgaaaagcatctaaggaattgtacctaaattttcttcaaatt 5189645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 368 - 476
Target Start/End: Original strand, 41130739 - 41130847
Alignment:
Q  368 taattatattacaatgactcgttctcaccggtaaacctcactttcgcaaacctttgatgctctttctccgatcacgacctcacactctagtggtcaatct 467  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41130739 taattatattacaatgactcgttctcatcggtaaacctcattttcgcaaacctttgatgctctttctccgatcacgacctcacactctagtggtcaatct 41130838  T
Q  468 cactctctg 476  Q
    |||||||||    
T  41130839 cactctctg 41130847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 231 - 370
Target Start/End: Complemental strand, 27241060 - 27240921
Alignment:
Q  231 cgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccata 330  Q
    |||||| |||||||||||||||| ||        |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27241060 cgtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaaccata 27240961  T
Q  331 cgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  27240960 cgaaaagcacctaaggaattgtacctaagttttctcctaa 27240921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 226 - 367
Target Start/End: Complemental strand, 14387156 - 14387015
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    ||||||||||| |||||||||||||||||||        ||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  14387156 tttttcgtatggttcttaactaaaaatacatattttttggatataataaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaa 14387057  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttcttc 367  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  14387056 ccatacgaaatgcatctaaggaattgtacctaagttttcttc 14387015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 19955051 - 19954913
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||| ||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  19955051 tttttgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaac 19954952  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
     ||||||||||||| ||||||||||||||||||||||||    
T  19954951 tatacgaaaagcacataaggaattgtacctaagttttct 19954913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 226 - 365
Target Start/End: Complemental strand, 47940712 - 47940572
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnng-atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaaga 324  Q
    ||||||||||| |||||||||||||||||||        | ||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  47940712 tttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggattcgaggaaatcatggtgaatttagttaaga 47940613  T
Q  325 accatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  47940612 accatacgaaaagcacctaagaaattgtacctaagttttct 47940572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 266 - 370
Target Start/End: Original strand, 40647188 - 40647292
Alignment:
Q  266 atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  40647188 atataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaaaaatcatacgaaaagcacctaaggaattgtacctaagttttct 40647287  T
Q  366 tctaa 370  Q
     ||||    
T  40647288 cctaa 40647292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 227 - 370
Target Start/End: Complemental strand, 42561435 - 42561292
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||| ||||| |||||||||||||||||||        |||||||||||||||||||||||||||||| | |  ||||||||||||||||||||||||||    
T  42561435 tttttgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatatgaagaaatcatggtgaatttagttaagaac 42561336  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    |||||||||||||||||||||||||||| |||| ||||| ||||    
T  42561335 catacgaaaagcacctaaggaattgtacttaagatttctcctaa 42561292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 2854672 - 2854534
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||| ||        ||||||||||||||||||||||||||| |||| || ||||||| ||||||||||||||||||    
T  2854672 ttttcgtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaagaac 2854573  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  2854572 catacgaaaagtatctaaggaattgtacctaagttttct 2854534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 3607869 - 3607731
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||    
T  3607869 ttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatgatgaatttagttaagaac 3607770  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||| ||||||||||||| |||| ||||||| ||||||    
T  3607769 catacaaaaagcacctaagaaattctacctaaattttct 3607731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 23698642 - 23698504
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||| ||        ||||||||||||||||||||||||||| |||| || ||||||| ||||||||||||||||||    
T  23698642 ttttcgtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaagaac 23698543  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  23698542 catacgaaaagtatctaaggaattgtacctaagttttct 23698504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 48954354 - 48954216
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||| ||        ||||||||||||||||||||||||||| |||| || ||||||| ||||||||||||||||||    
T  48954354 ttttcgtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaagaac 48954255  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||| |||||| |||||||||||||||||||||||||||    
T  48954254 catatgaaaagtacctaaggaattgtacctaagttttct 48954216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 227 - 363
Target Start/End: Original strand, 957619 - 957756
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnn-gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    |||||||||||||||||||||||| |||||         |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  957619 ttttcgtatgattcttaactaaaattacatattttttttgatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaa 957718  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
     |||||||||| |||||||| ||||||| |||||||||    
T  957719 tcatacgaaaaacacctaagaaattgtatctaagtttt 957756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 9978192 - 9978053
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnng-atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    |||||||||| |||||||||||||||||||        | ||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||    
T  9978192 ttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatagtgaatttagttaagaa 9978093  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
     |||||||||||||| ||||||||||||||||| ||||||    
T  9978092 tcatacgaaaagcacataaggaattgtacctaaattttct 9978053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 15324657 - 15324796
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnng-atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    |||||||||| |||||||||||||||||||        | ||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||    
T  15324657 ttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatagtgaatttagttaagaa 15324756  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||| ||||||||||||| ||| ||||||    
T  15324757 ccatacgaaaagcacataaggaattgtacataaattttct 15324796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 269 - 375
Target Start/End: Original strand, 36880584 - 36880690
Alignment:
Q  269 taacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttct 368  Q
    |||||||||||||||||||||||||||| || ||||||||||   |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  36880584 taacaaactttgagaaaattatggatttgaggaaatcatggtatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcct 36880683  T
Q  369 aattata 375  Q
    |||||||    
T  36880684 aattata 36880690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 265 - 363
Target Start/End: Complemental strand, 49284396 - 49284298
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||| |||||||||||||||||    
T  49284396 gatataacaaactttgaaaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacaaaaaacaactaagaaattgtacctaagtttt 49284298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 1387809 - 1387947
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        ||||||| ||||||||||||||||||| |||| || ||||||||||   |||||||||||||    
T  1387809 ttttcgtatggttcttaactaaaaatacatattttttggatataataaactttgagaaaattatgaatttgaggaaatcatggtatctttagttaagaac 1387908  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  1387909 catacgaaaagcacctaaggaattgtacctaaattttct 1387947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 2125210 - 2125072
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||  |||||||||||||||||||        ||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||    
T  2125210 ttttcgtatagttcttaactaaaaatacatatttttttgatataacaaactttgagaaaattataaatttaaaaaaatcatggtgaatttagttaagaac 2125111  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||| |||| ||||||| |||| ||||||    
T  2125110 catacgaaaagcacataagaaattgtaactaaattttct 2125072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 19797121 - 19796983
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        ||||||||||||||||| |||||||||||||| || ||||||||||   ||||||||| |||    
T  19797121 ttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgaaaaaattatggatttgaggaaatcatggtatttttagttaaaaac 19797022  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  19797021 catacgaaaagcacctaagaaattgtacctaagttttct 19796983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 50627162 - 50627300
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||| || |||||||| |   |||||||||||||    
T  50627162 ttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaac 50627261  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  50627262 catacgaaaagcatataaggaattgtacctaagttttct 50627300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 51789735 - 51789599
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||| ||||        ||||||||| ||||||||||||||||||| || || |||||||||||||||||||||| |||    
T  51789735 ttttcgtatggttcttaactaaaaacacat--tttttagatataacatactttgagaaaattatggaattgaggaaatcatggtgaatttagttaaaaac 51789638  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  51789637 catacgaaaatcacctaaggaattgtacctaagttttct 51789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 232 - 365
Target Start/End: Original strand, 27670179 - 27670313
Alignment:
Q  232 gtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatac 331  Q
    |||||||||||||||||||||||||         |||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||    
T  27670179 gtatgattcttaactaaaaatacatattttttgaatataaaaaactttgagaaaattatggatttaaggaaatcatgatgaatttagttaaaaaccatac 27670278  T
Q  332 gaaaagcacctaaggaattgt-acctaagttttct 365  Q
    ||||||||| |||||||||||  ||||||||||||    
T  27670279 gaaaagcacataaggaattgtgccctaagttttct 27670313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 265 - 365
Target Start/End: Original strand, 26208494 - 26208594
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    |||||||||||||||||||||||||||||||| |  |||| ||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||    
T  26208494 gatataacaaactttgagaaaattatggatttgaagaaattatggtgaatttagttcagaaccatacgaaaagcacctaaggaattatacataagttttc 26208593  T
Q  365 t 365  Q
    |    
T  26208594 t 26208594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 265 - 365
Target Start/End: Complemental strand, 27926352 - 27926253
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    ||||||||||||||||||||||||||||||| | |||| |||  |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  27926352 gatataacaaactttgagaaaattatggattgaggaaa-tcacagtgaatttagttaagaaccatacgaaaagcacataaggaattatacctaagttttc 27926254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 265 - 365
Target Start/End: Complemental strand, 50162640 - 50162540
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||||| |||| |||||||| ||||  ||||||||||||||||||||||||||    
T  50162640 gatataacaaactttgagaaaattatagatttgagaaaatcacggtgaatttaattaaaaaccatacaaaaaatacctaaggaattgtacctaagttttc 50162541  T
Q  365 t 365  Q
    |    
T  50162540 t 50162540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 226 - 338
Target Start/End: Original strand, 6079414 - 6079526
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    ||||||||| | ||||| |||||||||||||        |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  6079414 tttttcgtacggttcttcactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaa 6079513  T
Q  326 ccatacgaaaagc 338  Q
    |||||||||||||    
T  6079514 ccatacgaaaagc 6079526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 226 - 365
Target Start/End: Original strand, 21930410 - 21930547
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnng-atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaaga 324  Q
    ||||||||||| |||||||||||||||||||        | |||||||||||||| ||||||||||||||||||  ||||   |||||||||||||||||    
T  21930410 tttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttaagaaaattatggatttaaagaaat---ggtgaatttagttaaga 21930506  T
Q  325 accatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||| |||||||| |||||||||||| ||||||    
T  21930507 accatacgaaaaacacctaagtaattgtacctaaattttct 21930547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 226 - 363
Target Start/End: Complemental strand, 27928439 - 27928302
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnng-atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaaga 324  Q
    ||||||||||| |||||||||||||||||||        | |||||||||||||||||||||||||||||| | |||| |||  ||||||||||||||||    
T  27928439 tttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggattgaggaaa-tcacagtgaatttagttaaga 27928341  T
Q  325 accatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||||| |||||||| |||||||||||| |||||||||    
T  27928340 accatacaaaaagcacataaggaattgtatctaagtttt 27928302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 51276835 - 51276697
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||| ||||||||||||         |||||| |||||||||||||||||||||||| || |||||||  |||||||||||||||||    
T  51276835 ttttcgtatggttcttagctaaaaatacattttttttttatataataaactttgagaaaattatggatttgaggaaatcataatgaatttagttaagaac 51276736  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||| | |||| ||||||| ||||||    
T  51276735 catacgaaaagcacctatgaaattatacctaaattttct 51276697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 265 - 363
Target Start/End: Complemental strand, 50856423 - 50856325
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||||||||| ||||||||||||||||| || || |||| ||||||||||||| |||||| |||||||||||||||||| ||||| ||||||||||||    
T  50856423 gatataacaaattttgagaaaattatggacttgaggaaataatggtgaatttagctaagaatcatacgaaaagcacctaaagaattttacctaagtttt 50856325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 265 - 345
Target Start/End: Complemental strand, 4299494 - 4299414
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaag 345  Q
    |||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||| |||||||||||| |||||||    
T  4299494 gatataacaaactttgagaaaattatggatttgaggaaataatggtgaatttagttaagagccatacgaaaagtacctaag 4299414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 227 - 363
Target Start/End: Complemental strand, 22339124 - 22338988
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    ||||| |||| |||||||||||||||||| |       |||| |||| ||||||||||||| |||||||| |  |||||||||||| |||||||||||||    
T  22339124 ttttcatatggttcttaactaaaaatacacctttgttggatagaacagactttgagaaaatgatggatttgatgaaatcatggtgagtttagttaagaac 22339025  T
Q  327 catacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||  ||||||||| || |||||||||||| |||||||    
T  22339024 caatcgaaaagcaacttaggaattgtacccaagtttt 22338988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 238 - 345
Target Start/End: Complemental strand, 48645143 - 48645036
Alignment:
Q  238 ttcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaag 337  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||||||| || |||||||| |   |||||||||||| |||||||||||    
T  48645143 ttcttaactaaaaatacatattttttagatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaagcatacgaaaag 48645044  T
Q  338 cacctaag 345  Q
    ||||||||    
T  48645043 cacctaag 48645036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 314 - 374
Target Start/End: Original strand, 19797099 - 19797159
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaattat 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  19797099 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcctatttat 19797159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 5189522 - 5189471
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5189522 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 5189471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 9978170 - 9978221
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9978170 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 9978221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 49285093 - 49285144
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49285093 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 49285144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 363
Target Start/End: Complemental strand, 16518402 - 16518302
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaat--ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttt 362  Q
    |||| |||||||| ||||||||||||| | || ||||||| |||||||||  |||||||| |||||||| ||||||||||||| ||||| ||||||||||    
T  16518402 gatacaacaaactatgagaaaattatgtaattgagaaaattatggtgaatatttagttaaaaaccataccaaaagcacctaagaaattgcacctaagttt 16518303  T
Q  363 t 363  Q
    |    
T  16518302 t 16518302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 266 - 323
Target Start/End: Original strand, 29598393 - 29598450
Alignment:
Q  266 atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaag 323  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  29598393 atataacaaactttgagaaaattatggatttaaggaaatcatagtgaatttagttaag 29598450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 301 - 365
Target Start/End: Original strand, 362462 - 362526
Alignment:
Q  301 aaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||| ||||||    
T  362462 aaatcatggtaaatttagttaagaatcatacgaaaagcacctaaagaattgtacctaaattttct 362526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 267 - 363
Target Start/End: Complemental strand, 36007920 - 36007824
Alignment:
Q  267 tataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||||||||||||||||||||||| |||| || |||||||||  | |||||||||||||| ||| |||| ||||||||||| || ||| |||||||    
T  36007920 tataacaaactttgagaaaattatgtatttgaggaaatcatggatagtttagttaagaaccgtaccaaaaacacctaaggaaatgcacccaagtttt 36007824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 314 - 370
Target Start/End: Original strand, 48954332 - 48954388
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  48954332 tttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttctcctaa 48954388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 314 - 370
Target Start/End: Complemental strand, 50627184 - 50627128
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  50627184 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcctaa 50627128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 2854650 - 2854701
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2854650 tttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttct 2854701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 3607847 - 3607898
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3607847 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttct 3607898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 4299513 - 4299564
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4299513 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttct 4299564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 14387133 - 14387184
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14387133 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttct 14387184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 15324679 - 15324628
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15324679 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttct 15324628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 23698620 - 23698671
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23698620 tttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttct 23698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 27926370 - 27926421
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27926370 tttagttaagaaccatacgaaaagcacctaaggaattgtacataagttttct 27926421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 42561413 - 42561464
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42561413 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttct 42561464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 47940689 - 47940740
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  47940689 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttct 47940740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 50162657 - 50162708
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  50162657 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttct 50162708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 315 - 365
Target Start/End: Original strand, 25297966 - 25298016
Alignment:
Q  315 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25297966 ttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttct 25298016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 238 - 363
Target Start/End: Original strand, 28244000 - 28244119
Alignment:
Q  238 ttcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaag 337  Q
    ||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| |||      ||||||||||||||||  |||| ||||     
T  28244000 ttcttaactaaaaatacatcttttttggatataacaaactttgagaaaattatggatttaaggaaa------tgaatttagttaagaattatacaaaaaa 28244093  T
Q  338 cacctaaggaattgtacctaagtttt 363  Q
    ||  |||| ||||||||| |||||||    
T  28244094 catataagaaattgtaccgaagtttt 28244119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 29598450 - 29598511
Alignment:
Q  309 gtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    ||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||| ||||    
T  29598450 gtgaatttagttaagaaccatacaaaaagtacctaacgaattgtacctaagttttctcctaa 29598511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 227 - 353
Target Start/End: Complemental strand, 35547840 - 35547714
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    ||||||||| ||||| || |||||||||||        |||||| |||||||  ||||||||||||||||||  |||| ||||||| |||||||||||||    
T  35547840 ttttcgtatcattctaaattaaaaatacattttttttggatatatcaaacttatagaaaattatggatttaaagaaattatggtgattttagttaagaac 35547741  T
Q  327 catacgaaaagcacctaaggaattgta 353  Q
    ||||  |||||||| |||| |||||||    
T  35547740 catataaaaagcacataagaaattgta 35547714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 314 - 378
Target Start/End: Original strand, 27241042 - 27241106
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaattatatta 378  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||| || | |||||||    
T  27241042 tttagttaagaaccatacgcaaagcacctaacgaattgtacctaagttttctccttaatatatta 27241106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 19955029 - 19955080
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  19955029 tttagttaagaaccatacaaaaagtacctaaggaattgtacctaagttttct 19955080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 27928416 - 27928467
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  27928416 tttagttaagaaccatacgaaaaacacctaaggaattgtacataagttttct 27928467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 51276813 - 51276864
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  51276813 tttagctaagaaccatacgaaaagcacctaagaaattgtacctaagttttct 51276864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 51789713 - 51789764
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  51789713 tttagttaagaaccatacgaaaagcatttaaggaattgtacctaagttttct 51789764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 310
Target Start/End: Original strand, 9895284 - 9895367
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggt 310  Q
    |||||||||| |||||||||||||||||||        ||||||||||||||||||||||||||| |||| || ||||||||||    
T  9895284 ttttcgtatggttcttaactaaaaatacatatttttttgatataacaaactttgagaaaattatgtatttgaggaaatcatggt 9895367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 265 - 359
Target Start/End: Complemental strand, 5059664 - 5059568
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa--ccatacgaaaagcacctaaggaattgtacctaag 359  Q
    ||||||||||||||||| |||||||||||||||| ||||| ||||| |||||| |||||||    ||||||||||||| ||| |||||  |||||||    
T  5059664 gatataacaaactttgataaaattatggatttaaaaaaattatggtaaatttaattaagaattatatacgaaaagcacataaagaattccacctaag 5059568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 225 - 326
Target Start/End: Original strand, 2302432 - 2302533
Alignment:
Q  225 ctttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaaga 324  Q
    ||||| |||||| ||||||||||||| ||||||       ||| || | |||||||||||||||||| |||| || |||||||||||||||| |||||||    
T  2302432 cttttccgtatggttcttaactaaaattacatctttcttggatgtagcgaactttgagaaaattatgaatttgaggaaatcatggtgaattttgttaaga 2302531  T
Q  325 ac 326  Q
    ||    
T  2302532 ac 2302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 2125188 - 2125239
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||| |||||||||||||||||| |||||||||||| ||||||    
T  2125188 tttagttaagaactatacgaaaagcacctaagaaattgtacctaaattttct 2125239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 40647169 - 40647118
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||| |||||||||| ||||||||||||| |||||||||||    
T  40647169 tttagttaagaaccacacgaaaagcagctaaggaattgtaactaagttttct 40647118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 314 - 363
Target Start/End: Original strand, 22339102 - 22339151
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||||||||||||||| ||||||||||||| |||||| |||||||||||    
T  22339102 tttagttaagaaccatatgaaaagcacctaaagaattgcacctaagtttt 22339151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 336
Target Start/End: Original strand, 3767687 - 3767795
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||||||||| |||||||||||||        | | | ||||||||| |||||||| |||||||||||||||||| | | |||||||||||||     
T  3767687 ttttcgtatgattcttgactaaaaatacattatttgtggttttgacaaactttaagaaaattgtggatttaagaaaatcat-gagtatttagttaagaat 3767785  T
Q  327 catacgaaaa 336  Q
    || |||||||    
T  3767786 cacacgaaaa 3767795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 336
Target Start/End: Complemental strand, 42010501 - 42010431
Alignment:
Q  266 atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaa 336  Q
    ||||||||||||||   |||||||||  ||||||||||||||||| |||||| |||| |||||||| ||||    
T  42010501 atataacaaactttcgaaaaattatgattttaagaaaatcatggtaaatttaattaaaaaccatacaaaaa 42010431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 320 - 365
Target Start/End: Complemental strand, 25297968 - 25297924
Alignment:
Q  320 taagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||    
T  25297968 taagaatcatacgaaaagcacctaaggaattgta-ctaagttttct 25297924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 335
Target Start/End: Complemental strand, 39015293 - 39015225
Alignment:
Q  267 tataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaa 335  Q
    |||||| ||||||||||||||||||||||| |  |||||||||| | || | | |||||||||||||||    
T  39015293 tataacgaactttgagaaaattatggatttgaagaaatcatggttagttaattaaagaaccatacgaaa 39015225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 353
Target Start/End: Complemental strand, 1387831 - 1387793
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgta 353  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  1387831 tttagttaagaaccatacgaaaagca-ctaaggaattgta 1387793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 6079437 - 6079386
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||| ||||||| |||||||| || |||||||||||||||| ||||||||    
T  6079437 tttagtgaagaaccgtacgaaaaacatctaaggaattgtacctgagttttct 6079386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 9895306 - 9895255
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||| ||||||  |||| ||||||| ||||||    
T  9895306 tttagttaagaaccatacgaaaagtacctaaaaaattatacctaaattttct 9895255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 353
Target Start/End: Complemental strand, 21930433 - 21930394
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgta 353  Q
    ||||||||||||||||||||||| || |||||||||||||    
T  21930433 tttagttaagaaccatacgaaaaacaactaaggaattgta 21930394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 36880342 - 36880291
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||| |||||||||||||| ||| |||  |||||||||||||||||||    
T  36880342 tttagttaggaaccatacgaaaaacacttaaaaaattgtacctaagttttct 36880291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 345
Target Start/End: Complemental strand, 48526020 - 48525943
Alignment:
Q  267 tataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaag 345  Q
    ||||||||||||  | | |||||| ||||||||||||||||||  | || ||||||||||| |||||||| ||||||||    
T  48526020 tataacaaacttaaaaataattatagatttaagaaaatcatggatagttaagttaagaaccgtacgaaaa-cacctaag 48525943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 16518424 - 16518468
Alignment:
Q  319 ttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||||||||||||||||| | |||| |||||| |||||||||||    
T  16518424 ttaagaaccatacgaaaagtatctaaagaattgcacctaagtttt 16518468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 363
Target Start/End: Complemental strand, 19204133 - 19204037
Alignment:
Q  267 tataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||| |||||||||||||||| || ||||| ||||||||||   | ||||||||  |||||||  |||  ||| |||||||||| | |||||||||    
T  19204133 tataataaactttgagaaaattgtgaatttatgaaaatcatgagtagtttagttagaaaccataaaaaattcacataaggaattgcatctaagtttt 19204037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 363
Target Start/End: Complemental strand, 19206543 - 19206447
Alignment:
Q  267 tataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||| |||||||||||||||| || ||||| ||||||||||   | ||||||||  |||||||  |||  ||| |||||||||| | |||||||||    
T  19206543 tataataaactttgagaaaattgtgaatttatgaaaatcatgagtagtttagttagaaaccataaaaaattcacataaggaattgcatctaagtttt 19206447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 341
Target Start/End: Complemental strand, 48958308 - 48958233
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacc 341  Q
    |||||||||||||| |||||||||||| ||||||  |||| ||| |||||||| | ||||| ||||| |||| ||||    
T  48958308 gatataacaaactt-gagaaaattatgtatttaaagaaattatgatgaatttaatcaagaatcataccaaaaacacc 48958233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 99; Significance: 1e-48; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 24836051 - 24836189
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||| ||||||||||||||        |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  24836051 ttttcgtatggttctnaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaac 24836150  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24836151 catacgaaaagcacctaaggaattgtacctaagttttct 24836189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 227 - 372
Target Start/End: Complemental strand, 30259206 - 30259061
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||| ||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  30259206 tttttgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaac 30259107  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttcttctaatt 372  Q
    |||| |||||||||||||||||||||||||||||||| | ||||||    
T  30259106 cataggaaaagcacctaaggaattgtacctaagttttatcctaatt 30259061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 20184379 - 20184240
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnng-atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    ||||||||||||||||||||||||||||||        | ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  20184379 ttttcgtatgattcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaa 20184280  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
     |||||||||||||||||||||||||||||||||||||||    
T  20184279 tcatacgaaaagcacctaaggaattgtacctaagttttct 20184240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 34052310 - 34052448
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        ||||||||||||||||||||||||||| |||| || |||||||||||||||||| |||||||    
T  34052310 ttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagctaagaac 34052409  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||||||||||||||    
T  34052410 catacgaaaagcacctaaggaattgtacctaagttttct 34052448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 35339418 - 35339280
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| ||||||| |||||||||||        |||||||||||||||||||||||||||||||| |  |||||||| |||||||||||||||||    
T  35339418 ttttcgtatggttcttaaataaaaatacatattttttggatataacaaactttgagaaaattatggatttgaagaaatcatgatgaatttagttaagaac 35339319  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||||||||||||||    
T  35339318 catacgaaaagcacctaaggaattgtacctaagttttct 35339280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 31231756 - 31231616
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnnga--tataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaaga 324  Q
    |||||||||| |||||||||||||||||||        ||  |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  31231756 ttttcgtatggttcttaactaaaaatacatattttttggacatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaaga 31231657  T
Q  325 accatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  31231656 accatacaaaaagcacctaaggaattgtacctaagttttct 31231616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 238 - 364
Target Start/End: Original strand, 30594735 - 30594861
Alignment:
Q  238 ttcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaag 337  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  30594735 ttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatacgaaaag 30594834  T
Q  338 cacctaaggaattgtacctaagttttc 364  Q
    || ||||||||||||||||||| ||||    
T  30594835 catctaaggaattgtacctaagctttc 30594861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 3953182 - 3953044
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||| ||||| |||||||||||||||||||        |||||||||||||||| ||||||||||||||| || |||||||||||||||||||||| |||    
T  3953182 tttttgtatggttcttaactaaaaatacatattttttggatataacaaactttgtgaaaattatggatttgaggaaatcatggtgaatttagttaaaaac 3953083  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  3953082 catacgaaaagtacataaggaattgtacctaagttttct 3953044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 10936610 - 10936472
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        | |||||||||||||||||||||||| ||||| || || |||||||||||||||||||||||    
T  10936610 ttttcgtatggttcttaactaaaaatacatattttttggttataacaaactttgagaaaattatagatttgaggaagtcatggtgaatttagttaagaac 10936511  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    | |||||||||||||||||||||||||| ||||||||||    
T  10936510 cgtacgaaaagcacctaaggaattgtacataagttttct 10936472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 38883252 - 38883390
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||| || |||||||| |   |||||||||||||    
T  38883252 ttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaac 38883351  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  38883352 catacgaaaagcatctaaggaattgtacctaagttttct 38883390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 232 - 365
Target Start/End: Complemental strand, 45997643 - 45997510
Alignment:
Q  232 gtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatac 331  Q
    ||||| |||||||||||||||||||        ||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  45997643 gtatggttcttaactaaaaatacatattttttggatataataaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatac 45997544  T
Q  332 gaaaagcacctaaggaattgtacctaagttttct 365  Q
     |||||||| || | |||||||||||||||||||    
T  45997543 aaaaagcacatatgaaattgtacctaagttttct 45997510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 40358146 - 40358287
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| ||||||||||||||| |||        ||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||     
T  40358146 ttttcgtatggttcttaactaaaaatgcatatttttttgatataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaagaat 40358245  T
Q  327 catacgaaaagcaccta---aggaattgtacctaagttttct 365  Q
    |||| ||||||||||||   ||||||||||||||||||||||    
T  40358246 cataggaaaagcacctaaggaggaattgtacctaagttttct 40358287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 265 - 370
Target Start/End: Original strand, 12142262 - 12142367
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||| || |||||    
T  12142262 gatataacaatctttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaactatacgaaaaacacataaggaattgtacccaaattttc 12142361  T
Q  365 ttctaa 370  Q
    | ||||    
T  12142362 tcctaa 12142367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 265 - 370
Target Start/End: Complemental strand, 39617943 - 39617838
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    |||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||| | || ||||| ||||||||||||||||||    
T  39617943 gatataacaaactttgagaaaattatggattggaggaaatcatggtgaatttagttaagaaccatacgaagaacatctaagaaattgtacctaagttttc 39617844  T
Q  365 ttctaa 370  Q
    | ||||    
T  39617843 tcctaa 39617838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 226 - 365
Target Start/End: Original strand, 37093798 - 37093937
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    ||||||||||||||||||| |||||||| ||        ||||||||||||||||||||||||||  |||| || |||||||||||||||||||||| ||    
T  37093798 tttttcgtatgattcttaattaaaaatatatattttttggatataacaaactttgagaaaattataaatttgaggaaatcatggtgaatttagttaaaaa 37093897  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||| ||||||| ||||||| |||| ||||||    
T  37093898 ccatacgaaaagtacctaagaaattgtatctaaattttct 37093937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 9285854 - 9285716
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| ||||||| |||||||||||        ||||||||||||||||| ||||||||  |||| || ||||||||||||||||| ||||||||    
T  9285854 ttttcgtatggttcttaaataaaaatacatattttttggatataacaaactttgataaaattataaatttgaggaaatcatggtgaatttaattaagaac 9285755  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||| ||||||||| || ||||||||||||||||||||    
T  9285754 catacaaaaagcaccaaatgaattgtacctaagttttct 9285716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 9289921 - 9289783
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| ||||||| |||||||||||        ||||||||||||||||| ||||||||  |||| || ||||||||||||||||| ||||||||    
T  9289921 ttttcgtatggttcttaaataaaaatacatattttttggatataacaaactttgataaaattataaatttgaggaaatcatggtgaatttaattaagaac 9289822  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||| ||||||||| || ||||||||||||||||||||    
T  9289821 catacaaaaagcaccaaatgaattgtacctaagttttct 9289783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 266 - 365
Target Start/End: Complemental strand, 39143813 - 39143714
Alignment:
Q  266 atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||| ||||||||||| || |||| |||||||||||||| ||||||||||||||||||| | || ||||||||||||||||||||    
T  39143813 atataacaaactttgagaatattatggatttgaggaaattatggtgaatttagtcaagaaccatacgaaaagcatccaatgaattgtacctaagttttct 39143714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 226 - 365
Target Start/End: Original strand, 48103398 - 48103534
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    |||||||||||||||||||||||||||||||        |||||||||||||||||||  ||||||||||| || |||||| |   ||||||||||||||    
T  48103398 tttttcgtatgattcttaactaaaaatacatattttttggatataacaaactttgagattattatggatttgaggaaatcacg---aatttagttaagaa 48103494  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||| |||||||||||| ||||||||  ||||||||||    
T  48103495 ccatacaaaaagcacctaaagaattgtagataagttttct 48103534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 265 - 354
Target Start/End: Complemental strand, 31521627 - 31521538
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtac 354  Q
    ||||||| ||||||||| ||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||    
T  31521627 gatataataaactttgaaaaaattatgaatttgagaaaatcatggtaaatttagttaagaaccatacgaaaagcatctaagaaattgtac 31521538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 25742571 - 25742437
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| || ||||||||||||||||        |||||||||||||||||||||||||||||||| || ||||     |||||||||||||||||    
T  25742571 ttttcgtatggttgttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaat----atgaatttagttaagaac 25742476  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||| ||||| |||||||| |||||||| ||||||||||    
T  25742475 cataggaaaaacacctaagaaattgtacataagttttct 25742437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 226 - 336
Target Start/End: Original strand, 33749673 - 33749784
Alignment:
Q  226 tttttcgtatgattcttaactaaaaata-catcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaaga 324  Q
    |||||||||||||||||||||||||||| |||        ||||||| ||||||||||||||||||| ||||||| |||||||| |||||||||||||||    
T  33749673 tttttcgtatgattcttaactaaaaatatcattatttttagatataataaactttgagaaaattatgaatttaaggaaatcatgatgaatttagttaaga 33749772  T
Q  325 accatacgaaaa 336  Q
    ||||||| ||||    
T  33749773 accatacaaaaa 33749784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 265 - 365
Target Start/End: Complemental strand, 24123857 - 24123757
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    |||||||||||||||||||||||||||||||| || ||||||| ||   |||||||| ||||||||| ||||| || ||||||||||||||||| |||||    
T  24123857 gatataacaaactttgagaaaattatggatttgaggaaatcatagtatttttagttaggaaccatacaaaaagtacataaggaattgtacctaaattttc 24123758  T
Q  365 t 365  Q
    |    
T  24123757 t 24123757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 227 - 363
Target Start/End: Original strand, 29277869 - 29278004
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||| ||||| |||||||||||||||||| |       |||| |||||| |||||||||||| |||||||||| |||||||||||||||||||||| ||     
T  29277869 tttttgtatggttcttaactaaaaataca-ctgttttggatacaacaaagtttgagaaaattttggatttaaggaaatcatggtgaatttagttaaaaat 29277967  T
Q  327 catacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    |||||| |||  |  ||||||||||||||||||||||    
T  29277968 catacggaaaatatataaggaattgtacctaagtttt 29278004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 314 - 379
Target Start/End: Original strand, 10936588 - 10936653
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaattatattac 379  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||    
T  10936588 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcctaaacatattac 10936653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 267 - 363
Target Start/End: Original strand, 10398390 - 10398486
Alignment:
Q  267 tataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    |||||||||||||||||| |||||| |||| || |||||||||  |||||||||||||||||||| |||||||  ||||||| || |||||||||||    
T  10398390 tataacaaactttgagaagattatgtatttgaggaaatcatggataatttagttaagaaccatacaaaaagcatataaggaaatgcacctaagtttt 10398486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 298 - 370
Target Start/End: Complemental strand, 35665702 - 35665630
Alignment:
Q  298 agaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    |||||||||||||   |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  35665702 agaaaatcatggtatttttagttaagaaccatacgaaaagcacctaagcaattgtacctaagttttctcctaa 35665630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 31231734 - 31231785
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31231734 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 31231785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 38528530 - 38528581
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38528530 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 38528581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 315 - 365
Target Start/End: Complemental strand, 33721879 - 33721829
Alignment:
Q  315 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33721879 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 33721829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 354
Target Start/End: Complemental strand, 38989173 - 38989084
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtac 354  Q
    |||||||||||||||||||||||||| ||||||||||||| ||| | ||||||||||| ||| |||||||||  || |||| ||||||||    
T  38989173 gatataacaaactttgagaaaattatagatttaagaaaattatgataaatttagttaaaaactatacgaaaaatacataagaaattgtac 38989084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 314 - 370
Target Start/End: Complemental strand, 38883274 - 38883218
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  38883274 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcctaa 38883218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 34052332 - 34052281
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  34052332 tttagttaagaaccatacgaaaagcacctaaggaaatgtacctaagttttct 34052281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 35665734 - 35665785
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  35665734 tttagttaaaaaccatacgaaaagcacctaaggaattgtacctaagttttct 35665785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 266 - 375
Target Start/End: Complemental strand, 47237526 - 47237425
Alignment:
Q  266 atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||||||  || ||||       ||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  47237526 atataacaaactttgagaaaattatggattcgaggaaat-------aatttagttaagaaccataggaaaagcacct-aggaattatacctaagttttct 47237435  T
Q  366 tctaattata 375  Q
     |||| ||||    
T  47237434 cctaaatata 47237425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 265 - 352
Target Start/End: Complemental strand, 16876558 - 16876470
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacg-aaaagcacctaaggaattgt 352  Q
    ||||||||||||| | ||||||||| |||||| ||||||||||||| ||||||  ||||||||||||| ||||||||| || |||||||    
T  16876558 gatataacaaactctaagaaaattacggatttgagaaaatcatggtaaatttaagtaagaaccatacgaaaaagcacccaaagaattgt 16876470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 24836073 - 24836022
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  24836073 tttagttnagaaccatacgaaaagcacctaagcaattgtacctaagttttct 24836022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 20184357 - 20184408
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  20184357 tttagttaagaatcatacgaaaagcagctaaggaattgtacctaagttttct 20184408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 30259184 - 30259235
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  30259184 tttagttaagaaccatacaaaaagcacccaaggaattgtacctaagttttct 30259235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 30594746 - 30594695
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  30594746 tttagttaagaactatgcgaaaagcacctaaggaattgtacctaagttttct 30594695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 47237546 - 47237597
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  47237546 tttagttaagaaccatacgaaaagcaccttagaaattgtacctaagttttct 47237597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 365
Target Start/End: Original strand, 39143826 - 39143875
Alignment:
Q  316 tagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  39143826 tagttaagaaccatacgaaaaacacctaatgaattgtacctaagttttct 39143875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 12142245 - 12142194
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||||||||||    
T  12142245 tttagttaagaaccatacccaaagcacgtaaggaattgtacctaagttttct 12142194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 322 - 365
Target Start/End: Complemental strand, 17101699 - 17101656
Alignment:
Q  322 agaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  17101699 agaaccatacgaaaagcacctaagaaattgtacctaagttttct 17101656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 322 - 365
Target Start/End: Original strand, 17101700 - 17101743
Alignment:
Q  322 agaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  17101700 agaaccatacgaaaagcacctaagaaattgtacctaagttttct 17101743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 29277891 - 29277840
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||||||||||    
T  29277891 tttagttaagaaccatacaaaaagtacctaaagaattgtacctaagttttct 29277840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 35339396 - 35339447
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||||    
T  35339396 tttatttaagaaccatacgaaaagtacataaggaattgtacctaagttttct 35339447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 326
Target Start/End: Original strand, 44148722 - 44148777
Alignment:
Q  271 acaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    ||||||||||||||||||||||||||||| ||||||  ||||||||| ||||||||    
T  44148722 acaaactttgagaaaattatggatttaaggaaatcacagtgaatttaattaagaac 44148777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 48103421 - 48103370
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||||    
T  48103421 tttagttaagaatcatacgaaaaacacctaagaaattgtacctaagttttct 48103370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 330
Target Start/End: Complemental strand, 21581240 - 21581183
Alignment:
Q  273 aaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccata 330  Q
    ||||||||  ||||| |||||||||| ||||||||| |||||||||||||||||||||    
T  21581240 aaactttgcaaaaatcatggatttaaaaaaatcatgatgaatttagttaagaaccata 21581183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 353
Target Start/End: Complemental strand, 22723328 - 22723240
Alignment:
Q  267 tataacaaactttgagaaaattatggatttaagaaaatcatggtgaat--ttagttaagaaccatacgaaaagcacctaaggaattgta 353  Q
    |||||||||||||||||||||||   ||||||| |||||| | |||||  ||||||||||| |||||||||| |||||||  |||||||    
T  22723328 tataacaaactttgagaaaattaaaaatttaaggaaatcacgatgaatatttagttaagaatcatacgaaaaacacctaaaaaattgta 22723240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 3953160 - 3953211
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||| ||||| ||||||| ||||||| |||||||||||    
T  3953160 tttagttaagaaccatacaaaaagtacctaagtaattgtatctaagttttct 3953211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 9285832 - 9285883
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||| ||||||    
T  9285832 tttatttaagaaccatacgaaaagtacctaaagaattgtacctaaattttct 9285883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 9289899 - 9289950
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||| ||||||    
T  9289899 tttatttaagaaccatacgaaaagtacctaaagaattgtacctaaattttct 9289950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 39617960 - 39618010
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||| ||||||||||||||||| |||||||| |||||||||||    
T  39617960 tttagttaagaactatacgaaaagcacctaaagaattgta-ctaagttttct 39618010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 365
Target Start/End: Complemental strand, 11486912 - 11486866
Alignment:
Q  319 ttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||| ||||| ||||||||||||| |||||    
T  11486912 ttaagaaccatacgaaaagcatctaagaaattgtacctaagctttct 11486866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 314 - 363
Target Start/End: Complemental strand, 38528443 - 38528394
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    |||||||||||||||||| |||||||  ||||||||||||||||| ||||    
T  38528443 tttagttaagaaccatacaaaaagcatttaaggaattgtacctaactttt 38528394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 283 - 363
Target Start/End: Complemental strand, 13729685 - 13729605
Alignment:
Q  283 aaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||||||| |||||| ||||| ||||| |||| |||||| ||||| ||||||| ||| |||| || | ||||||||||||    
T  13729685 aaaattatgaatttaaaaaaataatggtaaattcagttaacaaccacacgaaaaacacttaagaaactatacctaagtttt 13729605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 322
Target Start/End: Complemental strand, 10465208 - 10465153
Alignment:
Q  267 tataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaa 322  Q
    ||||| |||| |||||||||| |||||||||| |||||||| || |||||||||||    
T  10465208 tataaaaaacattgagaaaatcatggatttaataaaatcatagttaatttagttaa 10465153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 25742549 - 25742600
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||| ||||||||||||||||| |||| ||||| || ||||||||||    
T  25742549 tttagttaacaaccatacgaaaagcacttaagaaattgcacttaagttttct 25742600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 313
Target Start/End: Complemental strand, 38528511 - 38528464
Alignment:
Q  266 atataacaaactttgagaaaattatggatttaagaaaatcatggtgaa 313  Q
    ||||||||||||||||||||||||||||||  || || ||||||||||    
T  38528511 atataacaaactttgagaaaattatggattcgaggaattcatggtgaa 38528464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 45997626 - 45997677
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||  ||| |||||||||||||| ||||| |||||||    
T  45997626 tttagttaagaaccatacctaaaacacctaaggaattgcacctaggttttct 45997677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 98; Significance: 5e-48; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 45865 - 46003
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||| ||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  45865 tttttgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaac 45964  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  45965 cataagaaaagcacctaaggaattgtacctaagttttct 46003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 45887 - 45836
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  45887 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttct 45836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 5e-48; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 8091093 - 8091231
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  8091093 ttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttaaggaaatcacggtgaatttagttaagaac 8091192  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  8091193 catacgaaaagcacctaagcaattgtacctaagttttct 8091231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 227 - 370
Target Start/End: Complemental strand, 21380081 - 21379938
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        |||||||||||| |||||||||||||| |||| || ||||||||||||||||||||||||||    
T  21380081 ttttcgtatggttcttaactaaaaatacatattttttggatataacaaacattgagaaaattatgaatttgaggaaatcatggtgaatttagttaagaac 21379982  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  21379981 catacgaaaagcacctaaggaattgtacctaagttttctcctaa 21379938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 227 - 370
Target Start/End: Original strand, 885416 - 885559
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||| ||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||     
T  885416 tttttgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgagaaaatcatgatgaatttagttaagaat 885515  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    |||| |||||||||||||||||||||||||||||||||| ||||    
T  885516 cataggaaaagcacctaaggaattgtacctaagttttctcctaa 885559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 226 - 365
Target Start/End: Original strand, 15546662 - 15546801
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    ||||| ||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||| || |||||||||| |||||| |||||||    
T  15546662 ttttttgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtaaatttaattaagaa 15546761  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15546762 ccatacgaaaagcacctaaggaattgtacctaagttttct 15546801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 227 - 370
Target Start/End: Original strand, 14393592 - 14393738
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnn---gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaag 323  Q
    ||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  14393592 ttttcgtatgattcttaactaaaaatacatatttctttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaag 14393691  T
Q  324 aaccatacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    |||||||| |||||||||||||||||| |||||||||||||| ||||    
T  14393692 aaccatacaaaaagcacctaaggaattatacctaagttttctcctaa 14393738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 227 - 363
Target Start/End: Original strand, 29609032 - 29609168
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    ||||||| || ||||||||||||||||||||       || |||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||    
T  29609032 ttttcgtgtggttcttaactaaaaatacatcttttttggagataacaaactttgagaaaattatggatttaaggaaatcacggtgaatttagttaaaaac 29609131  T
Q  327 catacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  29609132 catacgaaaagcatctaaggaattgtacgtaagtttt 29609168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 11687283 - 11687145
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||| || |||||||| |   |||||||||||||    
T  11687283 ttttcgtatggttcttaactaaaaatacatatttttttgatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaac 11687184  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  11687183 catacgaaaagcatctaaggaattgtacctaagttttct 11687145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 226 - 365
Target Start/End: Original strand, 7808639 - 7808778
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    |||||||| || || ||||||||||||||||        |||||||||||||||||||||||||| ||||| || ||||||||||   ||||||||||||    
T  7808639 tttttcgtttggtttttaactaaaaatacatattttttggatataacaaactttgagaaaattatagatttgaggaaatcatggtatttttagttaagaa 7808738  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7808739 ccatacgaaaagcacctaaggaattgtacctaagttttct 7808778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 265 - 370
Target Start/End: Complemental strand, 4890582 - 4890477
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    ||||||||||||||||||||||||||| |||| || |||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  4890582 gatataacaaactttgagaaaattatgaatttgaggaaatcatggtaaatttagttaagaaccatacgaaaaacacctaagaaattgtacctaagttttc 4890483  T
Q  365 ttctaa 370  Q
    | ||||    
T  4890482 tcctaa 4890477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 265 - 370
Target Start/End: Original strand, 13439765 - 13439870
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||  | ||||||||||||||||||    
T  13439765 gatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatacgaaaaacacctgcgtaattgtacctaagttttc 13439864  T
Q  365 ttctaa 370  Q
    | ||||    
T  13439865 tcctaa 13439870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 227 - 358
Target Start/End: Original strand, 3369016 - 3369147
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||         |||||||||||||||||||||||||| |||| || ||||||||||||||||||||| ||||    
T  3369016 ttttcgtatggttcttaactaaaaatacatattttttgaatataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaggaac 3369115  T
Q  327 catacgaaaagcacctaaggaattgtacctaa 358  Q
     ||||||||||||||||| |||||||||||||    
T  3369116 gatacgaaaagcacctaacgaattgtacctaa 3369147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 265 - 362
Target Start/End: Original strand, 4238923 - 4239020
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttt 362  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||| ||||||||  ||||||||||||||||||||    
T  4238923 gatataacaaactttgagaaaattaaggatttgagaaaatcatggtgaatttaattaagaaccatacaaaaagcacagaaggaattgtacctaagttt 4239020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 265 - 365
Target Start/End: Complemental strand, 18998218 - 18998119
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    |||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||    
T  18998218 gatataacaaactttgagaaaattatggattcgaggaaatcatggtgaatttagttaagaa-cgtacgaaaaacacctaaggaattgtacctaagttttc 18998120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 226 - 363
Target Start/End: Original strand, 20501736 - 20501872
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    ||||||||||| |||||||||||||||||||        |||||||||||||| ||||||||||||||||| |  ||||||||||   ||||||||||||    
T  20501736 tttttcgtatggttcttaactaaaaatacatattttttggatataacaaacttcgagaaaattatggatttgaagaaatcatggtatttttagttaagaa 20501835  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  20501836 ccatacgaaaagcacctaagaaattgta-ctaagtttt 20501872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 226 - 365
Target Start/End: Complemental strand, 13172714 - 13172576
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    ||||||||||| ||||||| |||||||||||        |||||||||||||||||||||||||||||||| || |||| ||  ||||||||||||||||    
T  13172714 tttttcgtatggttcttaagtaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatgata-tgaatttagttaagaa 13172616  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||| || |||  ||||||||||||||||||||    
T  13172615 ccatacgaaaaacatctagagaattgtacctaagttttct 13172576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 227 - 336
Target Start/End: Complemental strand, 31764465 - 31764356
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||  |||||||||||| ||||||        |||| |||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||    
T  31764465 ttttcgtatagttcttaactaaagatacatattttttggatacaacaaactttgagaaaattatgaatttgagaaaataatggtgaatttagttaagaac 31764366  T
Q  327 catacgaaaa 336  Q
    ||||| ||||    
T  31764365 catacaaaaa 31764356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 21380059 - 21380110
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21380059 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 21380110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 365
Target Start/End: Original strand, 17279601 - 17279693
Alignment:
Q  270 aacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||| ||||||||| |||| |  |||||||| ||||||||||||||||| |||||||   |||||||| |||||||||||||||||||    
T  17279601 aacaaactttgataaaattatgaatttgaagaaatcatgatgaatttagttaagaactatacgaa---cacctaagaaattgtacctaagttttct 17279693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 314 - 370
Target Start/End: Complemental strand, 885438 - 885382
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  885438 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcctaa 885382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 4890599 - 4890650
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4890599 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaaattttct 4890650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 365
Target Start/End: Complemental strand, 6433747 - 6433692
Alignment:
Q  310 tgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  6433747 tgaatttagttaagaaccatacgaaaagcacctaagaaattatacctaagttttct 6433692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 11687261 - 11687312
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11687261 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttct 11687312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 3369038 - 3368987
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  3369038 tttagttaagaaccatacgaaaagcacctaaggaattgtactcaagttttct 3368987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 290 - 345
Target Start/End: Original strand, 6433751 - 6433806
Alignment:
Q  290 tggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaag 345  Q
    ||||||| || ||||||| |||||||||||||||||||||||||||||||||||||    
T  6433751 tggatttgaggaaatcatagtgaatttagttaagaaccatacgaaaagcacctaag 6433806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 8091115 - 8091064
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  8091115 tttagttaagaaccatacgaaaagcacctaaggaattgtatctaaattttct 8091064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 20501759 - 20501708
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  20501759 tttagttaagaaccatacgaaaaacacctaaggaattgtaactaagttttct 20501708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 266 - 365
Target Start/End: Complemental strand, 17367158 - 17367066
Alignment:
Q  266 atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||| |||| |  |||||||        |||||||||| ||||||||||| || ||||||||||||||||||||||||    
T  17367158 atataacaaactttgagaaaattatgaatttgatgaaatcatc-------tagttaagaatcatacgaaaagaacataaggaattgtacctaagttttct 17367066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 7808662 - 7808611
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||| ||||| ||||||| ||||||||||||||||||||||||||||    
T  7808662 tttagttaaaaaccaaacgaaaaacacctaaggaattgtacctaagttttct 7808611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 13439748 - 13439697
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||| |||||||||||||||||| || ||||||||||||||||||||||||    
T  13439748 tttagctaagaaccatacgaaaagtacttaaggaattgtacctaagttttct 13439697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 15546685 - 15546634
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||| |||| || |||||||||||||||||||||||||    
T  15546685 tttagttaagaaccatacaaaaaacaactaaggaattgtacctaagttttct 15546634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 18998235 - 18998286
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||| ||||||||||||||||||||||||||||||||||| |||| ||||||    
T  18998235 tttaattaagaaccatacgaaaagcacctaaggaattgtagctaaattttct 18998286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 314 - 363
Target Start/End: Complemental strand, 29609054 - 29609005
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||||||||||||| ||||||||||| ||| ||||||||||||||||||    
T  29609054 tttagttaagaaccacacgaaaagcacttaaagaattgtacctaagtttt 29609005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 14393614 - 14393574
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtac 354  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  14393614 tttagttaagaatcatacgaaaagcacctaaggaattgtac 14393574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 340
Target Start/End: Original strand, 7187633 - 7187706
Alignment:
Q  267 tataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcac 340  Q
    ||||| |||||||||||||| |||| |||| || ||||||||||  |||||||||| ||| |||| ||||||||    
T  7187633 tataataaactttgagaaaaatatgaatttgagtaaatcatggtttatttagttaataactatacaaaaagcac 7187706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 314 - 363
Target Start/End: Original strand, 31764443 - 31764492
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||||||||||| |||||||||| | ||||| |||||||||||||||||    
T  31764443 tttagttaagaactatacgaaaagtatctaagaaattgtacctaagtttt 31764492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 330
Target Start/End: Original strand, 30905046 - 30905110
Alignment:
Q  266 atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccata 330  Q
    |||||| |||||||||||||||||| ||||| || | |||| | ||||||||||||| |||||||    
T  30905046 atataaaaaactttgagaaaattatagatttgagtagatcacgatgaatttagttaaaaaccata 30905110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 305
Target Start/End: Complemental strand, 34522362 - 34522322
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatc 305  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  34522362 gatataacaaactttaagaaaattatgaatttaagaaaatc 34522322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 345
Target Start/End: Complemental strand, 2599156 - 2599078
Alignment:
Q  266 atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaag 345  Q
    ||||||||| |||||| ||||||||| |||| |  |||||||||| ||||||||||||||  |||| ||||| |||||||    
T  2599156 atataacaagctttga-aaaattatgaatttgaacaaatcatggttaatttagttaagaatgatacaaaaagtacctaag 2599078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 367
Target Start/End: Complemental strand, 17279577 - 17279524
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttc 367  Q
    |||| ||||||||||||||||||  ||||||| |||||||  ||||||||||||    
T  17279577 tttaattaagaaccatacgaaaaatacctaagaaattgtagataagttttcttc 17279524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 365
Target Start/End: Original strand, 5416655 - 5416683
Alignment:
Q  337 gcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||||    
T  5416655 gcacctaaggaattgtacctaagttttct 5416683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 5e-48; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 1298943 - 1299081
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||| ||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1298943 tttttgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaac 1299042  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  1299043 cataagaaaagcacctaaggaattgtacctaagttttct 1299081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 265 - 365
Target Start/End: Complemental strand, 24915896 - 24915796
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24915896 gatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 24915797  T
Q  365 t 365  Q
    |    
T  24915796 t 24915796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 530809 - 530671
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||    
T  530809 ttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatgatggtgaatttagttaagaac 530710  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  530709 catacaaaaagcacctaaggaattgtacctaagttttct 530671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 18417688 - 18417826
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||| ||        |||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||    
T  18417688 ttttcgtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttaattaagaac 18417787  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  18417788 catacaaaaagcacctaaggaattgtacctaagttttct 18417826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 265 - 365
Target Start/End: Complemental strand, 42274594 - 42274494
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42274594 gatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttc 42274495  T
Q  365 t 365  Q
    |    
T  42274494 t 42274494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 21048844 - 21048707
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        |||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||    
T  21048844 ttttcgtatggttcttaactaaaaatacat-attttttgatataacaaacttcgagaaaattatggatttgaggaaatcatggtgaatttagttaagaac 21048746  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  21048745 catacgaaaagcatctaacgaattgtacctaagttttct 21048707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 32318860 - 32318722
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    ||||| |||||||||||| |||||||| ||        |||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||    
T  32318860 ttttcatatgattcttaattaaaaatatatattttttggatataacaaactttgagaaaattatggatctgaggaaatcatggtgaatttagttaagaac 32318761  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  32318760 catacgaaaagcacataaggaattgtacctaagttttct 32318722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 265 - 365
Target Start/End: Complemental strand, 24969643 - 24969543
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    ||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24969643 gatataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaagaattgtacctaagttttc 24969544  T
Q  365 t 365  Q
    |    
T  24969543 t 24969543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 226 - 370
Target Start/End: Original strand, 35360706 - 35360849
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    ||||||||||| |||||||||||||||||||        ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  35360706 tttttcgtatggttcttaactaaaaatacatattttttagatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaagaa 35360805  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    ||||||||||| || ||||  ||||||| ||||||||||| ||||    
T  35360806 ccatacgaaaaacaactaaaaaattgta-ctaagttttctcctaa 35360849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 13204408 - 13204546
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||| ||||| |||||||||||||||||||        |||||||||||||||| ||||||||||||||| || |||||||||||||||||||||| |||    
T  13204408 tttttgtatggttcttaactaaaaatacatattttttggatataacaaactttgtgaaaattatggatttgaggaaatcatggtgaatttagttaaaaac 13204507  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  13204508 catacgaaaagtacataaggaattgtacctaagttttct 13204546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 20435280 - 20435142
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        |||||||||||||| ||||||||||||||||| || |||||||| |||||||||||||||||    
T  20435280 ttttcgtatggttcttaactaaaaatacatattttttggatataacaaacttcgagaaaattatggatttgaggaaatcatgatgaatttagttaagaac 20435181  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||| |||||||||||||  ||||||||||    
T  20435180 catacgaaaagcatctaaggaattgtatataagttttct 20435142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 55107555 - 55107693
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    ||||| |||| |||||||||||||||||||        ||||||||||||||||||||||||||| |||| || |||||||||| |||||||| ||||||    
T  55107555 ttttcatatggttcttaactaaaaatacatattatttggatataacaaactttgagaaaattatgcatttgaggaaatcatggtaaatttagtaaagaac 55107654  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  55107655 catacaaaaagcacctaaggaattgtacctaagttttct 55107693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 238 - 365
Target Start/End: Original strand, 27434652 - 27434779
Alignment:
Q  238 ttcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaag 337  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||| |||| || |||| ||||| ||||||||||||||||||||||||||    
T  27434652 ttcttaactaaaaatacattttttttggatataacaaactttgagaaaattatgaatttgaggaaattatggtaaatttagttaagaaccatacgaaaag 27434751  T
Q  338 cacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||| ||||||||||    
T  27434752 cacctaaggaattgtacttaagttttct 27434779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 231 - 365
Target Start/End: Complemental strand, 23928703 - 23928570
Alignment:
Q  231 cgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccata 330  Q
    ||||||||||||||||||||||| ||        ||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||| ||||    
T  23928703 cgtatgattcttaactaaaaatatattttttttggatataacaaattttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaatcata 23928604  T
Q  331 cgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||| || |||||||||||||||||||||||||    
T  23928603 cgaaaaaca-ctaaggaattgtacctaagttttct 23928570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 265 - 365
Target Start/End: Original strand, 4552854 - 4552954
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    |||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||  ||||||  |||||||||||||||||||||||    
T  4552854 gatataacaaactttgagaaaattatggatttgaggaaatcatgatgaatttagttaagaaccatacagaaagcatataaggaattgtacctaagttttc 4552953  T
Q  365 t 365  Q
    |    
T  4552954 t 4552954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 265 - 365
Target Start/End: Complemental strand, 4688349 - 4688249
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    |||||||||||||||||||||||| || |||| || ||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4688349 gatataacaaactttgagaaaattgtgaatttgaggaaatcacagtgaatttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttc 4688250  T
Q  365 t 365  Q
    |    
T  4688249 t 4688249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 265 - 365
Target Start/End: Complemental strand, 55049502 - 55049402
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    ||||||||||||||||| |||||||||| ||| || ||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  55049502 gatataacaaactttgaaaaaattatgggtttgaggaaatcatagtgaatttagttaagaactatacgaaaagcacctaaggaattgtacataagttttc 55049403  T
Q  365 t 365  Q
    |    
T  55049402 t 55049402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 268 - 363
Target Start/End: Complemental strand, 9355652 - 9355557
Alignment:
Q  268 ataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    |||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||    
T  9355652 ataacaaattctgagaaaattatggatttaaggaaatcatggtgaatttagttaagaaccatatgaaaagcacctaaggaattgtacggaagtttt 9355557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 227 - 362
Target Start/End: Original strand, 24294498 - 24294636
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||||||||||| |||||||||||        ||||||||||||||||||||||||| | |||| || |||| |||||||||||||||||||||    
T  24294498 ttttcgtatgattcttaattaaaaatacatatttttttgatataacaaactttgagaaaattacgaatttgaggaaattatggtgaatttagttaagaac 24294597  T
Q  327 catacgaaa---agcacctaaggaattgtacctaagttt 362  Q
    |||||||||   | |||||||||||||||||||||||||    
T  24294598 catacgaaaaacaccacctaaggaattgtacctaagttt 24294636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 227 - 370
Target Start/End: Complemental strand, 28809987 - 28809843
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtg-aatttagttaagaa 325  Q
    |||| ||||| |||||||||| ||||||||        ||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||| ||    
T  28809987 ttttggtatggttcttaactagaaatacatattttttggatataacaaattttgagaaaattatggatttgagaaaatcatggtgaaatttagttaaaaa 28809888  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    | |||| ||||||||||||| ||||||||||||||||||| ||||    
T  28809887 caataccaaaagcacctaagaaattgtacctaagttttctcctaa 28809843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 226 - 365
Target Start/End: Complemental strand, 3422570 - 3422431
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    ||||||||||| || ||||||||||||| |||       |||| || |||||||||||||||||||||||| ||||||||||  | |||||| |||||||    
T  3422570 tttttcgtatggtttttaactaaaaatatatctttttacgatacaataaactttgagaaaattatggatttgagaaaatcatactaaatttaattaagaa 3422471  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    | |||||||||||||||||| |||||||||||||||||||    
T  3422470 ctatacgaaaagcacctaagaaattgtacctaagttttct 3422431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 265 - 355
Target Start/End: Original strand, 2272435 - 2272525
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacc 355  Q
    |||| |||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||    
T  2272435 gatagaacaaactttgataaaattatggatttaaggaaatcatggtgaatttagctaagaaccatacgaaaagcacataatgaattgtacc 2272525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 28288051 - 28288123
Alignment:
Q  176 ggtagtgagtggctctctaatgattgttagaaggataaaatttagtgcactttttcgtatgattcttaactaa 248  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  28288051 ggtagtgagtggctctctaatgattgttagatggattaaatttagtgccctttttcgtatgattcttaactaa 28288123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 227 - 363
Target Start/End: Complemental strand, 16995694 - 16995559
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| || |||||||| ||||||||       ||||||||||||| ||| ||||| |||| ||| ||||||||||| |||||||| |||| |||    
T  16995694 ttttcgtatggtttttaactaacaatacatcttttttagatataacaaactctgaaaaaatgatgggtttgagaaaatcatgttgaatttaattaaaaac 16995595  T
Q  327 catacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    |||||||||| |||| |||||||||||||||||||||    
T  16995594 catacgaaaaacacc-aaggaattgtacctaagtttt 16995559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 298 - 365
Target Start/End: Complemental strand, 43486269 - 43486202
Alignment:
Q  298 agaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  43486269 agaaaatcatggtgaatttagttaagaaccataggaaaagtacctaaggaattgtacctaagttttct 43486202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 266 - 368
Target Start/End: Complemental strand, 36031031 - 36030938
Alignment:
Q  266 atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||||||| ||         ||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||    
T  36031031 atataacaaactttgagaaaattatggatttgag---------gtgaatttagttaagaaacatacgaaaagcacgtaaggaattgtacctaacttttct 36030941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 267 - 340
Target Start/End: Original strand, 56552132 - 56552205
Alignment:
Q  267 tataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcac 340  Q
    |||||||||||||||||||||||||||||| || |||||||||| |||||| ||||||||||||||| ||||||    
T  56552132 tataacaaactttgagaaaattatggatttgaggaaatcatggttaatttatttaagaaccatacgataagcac 56552205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 28288177 - 28288249
Alignment:
Q  184 gtggctctctaatgattgttagaaggataaaatttagtgcac-tttttcgtatgattcttaactaaaaataca 255  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||    
T  28288177 gtggctctctaaagattgttagaaggataaaatttagtgcacttttttcatatgatttttaactaaaaataca 28288249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 530787 - 530838
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  530787 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 530838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 18417710 - 18417659
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18417710 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 18417659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 52824292 - 52824241
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52824292 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 52824241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 1298965 - 1298914
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1298965 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttct 1298914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 266 - 336
Target Start/End: Original strand, 4895042 - 4895113
Alignment:
Q  266 atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaag-aaccatacgaaaa 336  Q
    |||||||||||||||||||||||||| |||| || |||||||||| |||||||||||| |||||||||||||    
T  4895042 atataacaaactttgagaaaattatgaatttgaggaaatcatggtaaatttagttaagaaaccatacgaaaa 4895113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 20435258 - 20435309
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20435258 tttagttaagaaccatacgaaaagcacctaaagaattgtacctaagttttct 20435309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 24969662 - 24969713
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24969662 tttagttaagaactatacgaaaagcacctaaggaattgtacctaagttttct 24969713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 42274611 - 42274662
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  42274611 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttct 42274662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 314 - 367
Target Start/End: Original strand, 37525061 - 37525114
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttc 367  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  37525061 tttagttaagaaccacacgaaaagcacctaaagaattgtacctaagttttcttc 37525114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 268 - 363
Target Start/End: Complemental strand, 19601039 - 19600944
Alignment:
Q  268 ataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    |||||||||||||| || ||||||||||||| |||||||||| ||||||| |||| |||||||  ||||  |||||| |||||||| |||| ||||    
T  19601039 ataacaaactttgaaaatattatggatttaacaaaatcatggcgaatttaattaaaaaccatataaaaattacctaaagaattgtatctaaatttt 19600944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 55107577 - 55107526
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  55107577 tttagttaagaaccatatgaaaagcacataaggaattgtacctaagttttct 55107526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 267 - 363
Target Start/End: Complemental strand, 47452910 - 47452814
Alignment:
Q  267 tataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    |||||||||||| | ||||||| ||||||| || ||| |||||  | || |||||||||||||| ||||||||||| ||||| || |||||||||||    
T  47452910 tataacaaacttcgggaaaattgtggatttgaggaaaacatgggtagttaagttaagaaccatatgaaaagcaccttaggaaatgaacctaagtttt 47452814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 4552838 - 4552787
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  4552838 tttagttaaaaaccatatgaaaagcacttaaggaattgtacctaagttttct 4552787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 4688366 - 4688417
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||| |||||||||||||||||| || |||||||||||||||||||||||||    
T  4688366 tttaattaagaaccatacgaaaatcatctaaggaattgtacctaagttttct 4688417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 23928685 - 23928736
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||| |||||| ||||||||||||||||||||| ||||||||||    
T  23928685 tttagttaagaatcatacgcaaagcacctaaggaattgtacataagttttct 23928736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 314 - 363
Target Start/End: Original strand, 3422547 - 3422596
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||||||||||    
T  3422547 tttagttaaaaaccatacgaaaaacacctaaagaattgtacctaagtttt 3422596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 320 - 365
Target Start/End: Complemental strand, 28573994 - 28573949
Alignment:
Q  320 taagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||    
T  28573994 taagaaccatgcgaaaagcacctaagtaattgtacctaagttttct 28573949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 316 - 365
Target Start/End: Original strand, 28809967 - 28810016
Alignment:
Q  316 tagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||||||||    
T  28809967 tagttaagaaccataccaaaagcagctaagaaattgtacctaagttttct 28810016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 314 - 370
Target Start/End: Complemental strand, 13204430 - 13204374
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    |||||||||||||||||| ||||| ||||||| ||||||| ||||||||||| ||||    
T  13204430 tttagttaagaaccatacaaaaagtacctaagtaattgtatctaagttttctcctaa 13204374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 314 - 370
Target Start/End: Complemental strand, 27434663 - 27434607
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    ||||||||||||| |||| |||||||| |||| ||||||||||||||||||| ||||    
T  27434663 tttagttaagaactatacaaaaagcacataagaaattgtacctaagttttctcctaa 27434607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 338
Target Start/End: Complemental strand, 47465124 - 47465014
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    ||||| ||||||| ||||||||||||| |||       || |||||||||||| | ||||||||| ||||||| |||||| | ||||||||||||| ||     
T  47465124 ttttcatatgatttttaactaaaaatatatcttgtttagagataacaaactttaaaaaaattatgaatttaag-aaatcacgatgaatttagttaaaaat 47465026  T
Q  327 catacgaaaagc 338  Q
     |||||||||||    
T  47465025 tatacgaaaagc 47465014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 52587430 - 52587479
Alignment:
Q  313 atttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||||||||| ||   ||||||||||||||    
T  52587430 atttagttaagaaccatacgaaaagcacctaagtaa---tacctaagttttct 52587479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 56552114 - 56552064
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    ||||||| |||||||||| |||||||||||||||| ||||||| |||||||    
T  56552114 tttagttgagaaccatacaaaaagcacctaaggaaatgtacctgagttttc 56552064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 2990642 - 2990573
Alignment:
Q  279 tgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaa 348  Q
    |||||||||||||||| |||| |||||| ||  |||| |||||||||||| | ||||||||| |||||||    
T  2990642 tgagaaaattatggatgtaaggaaatcacgggtaattaagttaagaaccacatgaaaagcacttaaggaa 2990573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 314 - 363
Target Start/End: Original strand, 47465102 - 47465151
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||||||| || |||| ||||||||||||| ||||||||||||||||||    
T  47465102 tttagttaaaaatcatatgaaaagcacctaaagaattgtacctaagtttt 47465151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 365
Target Start/End: Complemental strand, 11330175 - 11330108
Alignment:
Q  298 agaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||   || ||||||||| |||| |||||||| ||||| ||||||| |||||||||||    
T  11330175 agaaaatcatggtattttcagttaagaatcatatgaaaagcatctaagaaattgtatctaagttttct 11330108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 296
Target Start/End: Complemental strand, 52587417 - 52587386
Alignment:
Q  265 gatataacaaactttgagaaaattatggattt 296  Q
    ||||||||||||||||||||||||||||||||    
T  52587417 gatataacaaactttgagaaaattatggattt 52587386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 336
Target Start/End: Complemental strand, 23482022 - 23481952
Alignment:
Q  266 atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaa 336  Q
    |||||||||| |||||||||||||| ||||||| || |||||  | |||||| |||||||| |||| ||||    
T  23482022 atataacaaattttgagaaaattatagatttaaaaacatcataataaatttaattaagaactatacaaaaa 23481952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 363
Target Start/End: Complemental strand, 2272420 - 2272371
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    |||||||||||||||||  ||||||||||||  ||||||| |||||||||    
T  2272420 tttagttaagaaccatataaaaagcacctaaaaaattgtaactaagtttt 2272371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 363
Target Start/End: Original strand, 42020208 - 42020257
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    |||||||||||||||||| ||||| | |||  ||||||||||||||||||    
T  42020208 tttagttaagaaccatacaaaaagtatctagagaattgtacctaagtttt 42020257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 315 - 363
Target Start/End: Original strand, 16995673 - 16995721
Alignment:
Q  315 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    |||||||| ||||||||||||| ||| ||| |||||||| |||||||||    
T  16995673 ttagttaaaaaccatacgaaaatcacttaaagaattgtatctaagtttt 16995721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 1e-45; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 20476462 - 20476600
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        ||||||||||| |||||||||||||||||||| || |||||||| |||||||||||||||||    
T  20476462 ttttcgtatggttcttaactaaaaatacatatttttgtgatataacaaattttgagaaaattatggatttgaggaaatcatgatgaatttagttaagaac 20476561  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20476562 catacgaaaagcacctaaggaattgtacctaagttttct 20476600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 1138590 - 1138728
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||    
T  1138590 ttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgagaaaatcataatgaatttagttaagaac 1138689  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||| ||| |||||||||||||||||||||    
T  1138690 catacgaaaagcagctatggaattgtacctaagttttct 1138728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 226 - 365
Target Start/End: Complemental strand, 33629488 - 33629347
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnn--gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaag 323  Q
    |||||||||||||||||||||||||||| ||          |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  33629488 tttttcgtatgattcttaactaaaaatatatatattttttggatataacaaactttgagaaaattatggatttgagaaaatcatagtgaatttagttaag 33629389  T
Q  324 aaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||| |||||||| ||||||||||||||||||||||||    
T  33629388 aaccataccaaaagcacataaggaattgtacctaagttttct 33629347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 226 - 365
Target Start/End: Original strand, 43539137 - 43539276
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    ||||||||||| |||| ||||| ||||||||        |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |    
T  43539137 tttttcgtatggttctgaactataaatacatattttttggatataacaaactttgagaaaattatggatttaagaaaatcacgatgaatttagttaagga 43539236  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||| ||||||||||||||||||||| ||||||    
T  43539237 ccatacgaaaaacacctaaggaattgtacctaaattttct 43539276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 226 - 364
Target Start/End: Original strand, 12807941 - 12808079
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    ||||||||||| || ||||||||||||||||        ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  12807941 tttttcgtatggtttttaactaaaaatacatattttttagatataacaaactttgaaaaaattatggatttaaggaaatcatggtgaatttagtcaagaa 12808040  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
     |||||||||| ||| |||||||||||||||||||||||    
T  12808041 tcatacgaaaaacacttaaggaattgtacctaagttttc 12808079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 15855874 - 15856012
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||| || |||||||| |   |||||||||||||    
T  15855874 ttttcgtatggttcttaactaaaaatacatatttttttgatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaac 15855973  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  15855974 catacgaaaagcatctaaggaattgtacctaagttttct 15856012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 16472986 - 16473124
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||| || |||||||| |   |||||||||||||    
T  16472986 ttttcgtatggttcttaactaaaaatacatatttttttgatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaac 16473085  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  16473086 catacgaaaagcatctaaggaattgtacctaagttttct 16473124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 35420752 - 35420614
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||| || |||||||| |   |||||||||||||    
T  35420752 ttttcgtatggttcttaactaaaaatacatatttttttgatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaac 35420653  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  35420652 catacgaaaagcatctaaggaattgtacctaagttttct 35420614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 226 - 365
Target Start/End: Original strand, 4266012 - 4266151
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    ||||||||||| |||||||||||||||||||        ||| ||||||||||| |||||||||||||||| |  |||||| ||||||||||||||||||    
T  4266012 tttttcgtatggttcttaactaaaaatacatattttttggatgtaacaaactttaagaaaattatggatttgaagaaatcacggtgaatttagttaagaa 4266111  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  4266112 ccatacgaaaaacacctaaggaattgtaccgaagttttct 4266151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 226 - 365
Target Start/End: Complemental strand, 13754432 - 13754293
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    ||||||||||| |||||||||||||||||||        |||||| |||||||||||||||||||| |||| || |||| ||||||||||||||||||||    
T  13754432 tttttcgtatggttcttaactaaaaatacatatttttttgatatagcaaactttgagaaaattatgaatttgaggaaattatggtgaatttagttaagaa 13754333  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
     |||||||||| ||| ||||||||||||||||||||||||    
T  13754332 tcatacgaaaaacacataaggaattgtacctaagttttct 13754293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 265 - 363
Target Start/End: Complemental strand, 32623317 - 32623219
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    |||||||||||||||||||||||||||||||||   ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32623317 gatataacaaactttgagaaaattatggatttacagaaatcatagtgaatttagttaagaaccatacgaaaaacacctaaggaattgtacctaagtttt 32623219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 226 - 364
Target Start/End: Original strand, 12744856 - 12744994
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    ||||| ||||| || ||||||||||||||||        ||||||||||||||||||||||||||| |||| || ||||||||||||||||||| || ||    
T  12744856 ttttttgtatggtttttaactaaaaatacatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagtcaaaaa 12744955  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
     |||||||||| |||||||||||||||||||||||||||    
T  12744956 tcatacgaaaaacacctaaggaattgtacctaagttttc 12744994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 21259870 - 21259732
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    ||||| |||| |||||||||||||||||||        |||||||||||||||||||||||||||  ||| || |||||||||||||||||  |||||||    
T  21259870 ttttcttatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatgattttgaggaaatcatggtgaatttaactaagaac 21259771  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||| ||| ||||||||| ||||||||||    
T  21259770 catacgaaaagcacataaagaattgtacgtaagttttct 21259732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 227 - 353
Target Start/End: Original strand, 21261974 - 21262100
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        |||||||||||||||||||||||| ||||||| || |||||||| |||||||||||||||||    
T  21261974 ttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattgtggatttgaggaaatcatgatgaatttagttaagaac 21262073  T
Q  327 catacgaaaagcacctaaggaattgta 353  Q
    ||||| ||||||  |||||||||||||    
T  21262074 catacaaaaagctgctaaggaattgta 21262100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 280 - 365
Target Start/End: Complemental strand, 21591300 - 21591215
Alignment:
Q  280 gagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||| || |||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  21591300 gagaaaattatggatttgaggaaatcatggtgaatttagttcacaaccatacgaaaagcacttaaggaattgtacctaagttttct 21591215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 280 - 365
Target Start/End: Complemental strand, 21595417 - 21595332
Alignment:
Q  280 gagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||| || |||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  21595417 gagaaaattatggatttgaggaaatcatggtgaatttagttcacaaccatacgaaaagcacttaaggaattgtacctaagttttct 21595332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 267 - 365
Target Start/End: Complemental strand, 37552408 - 37552310
Alignment:
Q  267 tataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||| |||| || || |||||||||||||||||||||||| ||| ||||||||  || ||||||||||||||||||||    
T  37552408 tataacaaactttgagaaaattatgaatttgaggaagtcatggtgaatttagttaagaaccgtacaaaaagcacggaatgaattgtacctaagttttct 37552310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 266 - 365
Target Start/End: Complemental strand, 780895 - 780796
Alignment:
Q  266 atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||| | ||||  ||||||||||| | |||||||||| ||||||| ||||||    
T  780895 atataacaaactttaagaaaattatggatttaaggaaatcatggtgaatttaatcaagagtcatacgaaaagaatctaaggaattctacctaacttttct 780796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 226 - 365
Target Start/End: Complemental strand, 1456163 - 1456025
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    |||| |||||| ||||| |||||||||||||        |||||||||||||||||||||||||||||||| ||||||| |  ||||||||||||| |||    
T  1456163 ttttccgtatggttcttgactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgagaaaattacagtgaatttagttatgaa 1456064  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||  |||||||  |||||||||||||| |||||||||    
T  1456063 ccatataaaaagcaggtaaggaattgtacc-aagttttct 1456025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 281 - 355
Target Start/End: Original strand, 2529066 - 2529140
Alignment:
Q  281 agaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacc 355  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||| |||||||||    
T  2529066 agaaaattatggatttaaggaaatcacggtgaatttagttaagaaccacacgaaaagcacctaagaaattgtacc 2529140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 273 - 363
Target Start/End: Original strand, 19976339 - 19976429
Alignment:
Q  273 aaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    |||||||||||||||||||||||| || |||||||||| |||||| | || ||| ||||||||||||||||||||||||||||||| ||||    
T  19976339 aaactttgagaaaattatggatttgaggaaatcatggtaaatttaatcaataactatacgaaaagcacctaaggaattgtacctaaatttt 19976429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 227 - 331
Target Start/End: Complemental strand, 24397386 - 24397282
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnng-atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    |||||||||| |||||||||||||||||||        | ||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||    
T  24397386 ttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcat-gtgaatttagttaagaa 24397288  T
Q  326 ccatac 331  Q
    ||||||    
T  24397287 ccatac 24397282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 265 - 336
Target Start/End: Original strand, 18236537 - 18236608
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaa 336  Q
    ||||||||||||||||| ||||||||| |||||||||||||| |  ||||||||||||||||||||||||||    
T  18236537 gatataacaaactttgaaaaaattatgtatttaagaaaatcacgacgaatttagttaagaaccatacgaaaa 18236608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 24397364 - 24397415
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24397364 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 24397415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 227 - 363
Target Start/End: Original strand, 35806966 - 35807102
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    ||||| |||| ||||||||||||||||||||        |||||||||||||| | |||||||  ||||| ||||||||||||||||||||| | |||||    
T  35806966 ttttcatatggttcttaactaaaaatacatcttttttgaatataacaaactttaaaaaaattaaagatttgagaaaatcatggtgaatttaggttagaac 35807065  T
Q  327 catacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||| |||| || ||||| |||| ||||||| ||||    
T  35807066 catacaaaaatcatctaagaaattttacctaaatttt 35807102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 329
Target Start/End: Complemental strand, 8364729 - 8364668
Alignment:
Q  268 ataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccat 329  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||    
T  8364729 ataacaaactttgagagaattataaatttaagaaaatcatggtgaatttagttaagaaccat 8364668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 15855896 - 15855845
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15855896 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttct 15855845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 35420730 - 35420781
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  35420730 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttct 35420781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 267 - 337
Target Start/End: Complemental strand, 37655252 - 37655182
Alignment:
Q  267 tataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaag 337  Q
    ||||||||||||||||||||||||| |||| || || |||||||||||||||||||||||| ||| |||||    
T  37655252 tataacaaactttgagaaaattatgaatttgaggaagtcatggtgaatttagttaagaaccgtacaaaaag 37655182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 314 - 367
Target Start/End: Original strand, 2255580 - 2255633
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttc 367  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  2255580 tttagttaagaaccacacgaaaagcacctaaagaattgtacctaagttttcttc 2255633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 314 - 363
Target Start/End: Original strand, 8364748 - 8364797
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8364748 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 8364797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 314 - 363
Target Start/End: Complemental strand, 16473008 - 16472959
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16473008 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaagtttt 16472959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 1138612 - 1138561
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  1138612 tttagttaagaaccatacgaaaagcaccaaaagaattgtacctaagttttct 1138561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 4266035 - 4265984
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  4266035 tttagttaagaaccatacgaaaaacacctaagaaattgtacctaagttttct 4265984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 265 - 363
Target Start/End: Complemental strand, 35276394 - 35276295
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatac-gaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||||| ||||||| |||||||||||||||| | ||||||||||| ||||||||||  ||||||||  |||| ||||||||  |||||| |||||||||    
T  35276394 gatataataaactttaagaaaattatggatttgataaaatcatggtaaatttagttataaaccatacaaaaaaacacctaagttattgtaactaagtttt 35276295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 301 - 363
Target Start/End: Original strand, 10132359 - 10132421
Alignment:
Q  301 aaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||| ||||||||||||||||||||||||| |||| ||| |||||||||||| |||||||||    
T  10132359 aaatcgtggtgaatttagttaagaaccatacaaaaaacacataaggaattgtatctaagtttt 10132421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 283 - 349
Target Start/End: Original strand, 28056179 - 28056245
Alignment:
Q  283 aaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaat 349  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||| ||||  ||| |||||||    
T  28056179 aaaattatggatttaagaaaatcatgataaatttagttaagaaccatacaaaaaataccaaaggaat 28056245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 314 - 375
Target Start/End: Original strand, 21259848 - 21259909
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaattata 375  Q
    ||||||||||||||||| |||||| |||||||||||||||||||| |||||| |||| ||||    
T  21259848 tttagttaagaaccataagaaaagtacctaaggaattgtacctaaattttctcctaaatata 21259909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 780915 - 780959
Alignment:
Q  319 ttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  780915 ttaagaaccatacgaaaagcacctaagaaattgtacctaagtttt 780959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 309 - 365
Target Start/End: Original strand, 2268718 - 2268774
Alignment:
Q  309 gtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||    
T  2268718 gtgaatttagttaagaaccatacaaaaagcatctaagaaattatacctaagttttct 2268774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 1164914 - 1164965
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||| ||||||||||||||||||||| |||||||||||||||||| ||||||    
T  1164914 tttaattaagaaccatacgaaaagcagctaaggaattgtacctaaattttct 1164965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 20476484 - 20476433
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||| |||  ||||||||||||||||||||    
T  20476484 tttagttaagaaccatacgaaaagcatctagagaattgtacctaagttttct 20476433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 305 - 363
Target Start/End: Original strand, 4913258 - 4913316
Alignment:
Q  305 catggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    |||| |||||||||||||||||||||| |||| |||||||| |||||||| ||||||||    
T  4913258 catgatgaatttagttaagaaccatacaaaaaacacctaagaaattgtacgtaagtttt 4913316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 17583367 - 17583408
Alignment:
Q  324 aaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  17583367 aaccatacgaaaagcacctaagaaattgtacctaagttttct 17583408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 25751570 - 25751619
Alignment:
Q  315 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||||||    
T  25751570 ttagttaagaaccacacgaaaagcacctaaaaaattgtacctaagttttc 25751619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 345
Target Start/End: Original strand, 5144496 - 5144576
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaag 345  Q
    ||||||| || ||| |||||||||||| ||||||  |||||||| ||||||||||||| || |||| ||||| ||||||||    
T  5144496 gatataataaccttagagaaaattatgaatttaaagaaatcatgatgaatttagttaaaaatcataggaaaaacacctaag 5144576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 13754409 - 13754460
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||| |||||||| |||||||| ||| ||||||    
T  13754409 tttagttaagaaccatacgaaaaacacctaagtaattgtacataaattttct 13754460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 33629465 - 33629516
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||| |||||||||| || |||||||||||||||||| ||||||    
T  33629465 tttagttaagaatcatacgaaaaacatctaaggaattgtacctaaattttct 33629516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 20464052 - 20464014
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgt 352  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  20464052 tttagttaagaaccatacaaaaagcacctaaggaattgt 20464014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 365
Target Start/End: Complemental strand, 29141853 - 29141807
Alignment:
Q  319 ttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||| |||||||| ||||||| |||||||||||    
T  29141853 ttaagaaccatacgaaaaacacctaagcaattgtatctaagttttct 29141807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 368
Target Start/End: Original strand, 29141863 - 29141912
Alignment:
Q  319 ttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttct 368  Q
    ||||||||||||||||||||||||| ||| |||||||||| |||| ||||    
T  29141863 ttaagaaccatacgaaaagcacctatggagttgtacctaatttttattct 29141912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 314 - 363
Target Start/End: Complemental strand, 35806988 - 35806939
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||||||||||||||| ||||||||||||| ||||||||| ||| ||||    
T  35806988 tttagttaagaaccatatgaaaagcacctaaagaattgtacttaaatttt 35806939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 317
Target Start/End: Complemental strand, 1164897 - 1164845
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaattta 317  Q
    ||||||| ||||||| | |||||||||||||||| ||||||||||| ||||||    
T  1164897 gatataataaacttttaaaaaattatggatttaaaaaaatcatggtaaattta 1164845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 366
Target Start/End: Complemental strand, 1384421 - 1384330
Alignment:
Q  274 aactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctt 366  Q
    ||||||||||||||||| ||||| || |||||||  | ||||||||||| ||| ||| || || |||||||| |||| ||||||| |||||||    
T  1384421 aactttgagaaaattatagatttgaggaaatcataataaatttagttaaaaactatatgataa-cacctaagaaattttacctaaattttctt 1384330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 2268225 - 2268174
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||| ||||||||||||| |||| ||| ||||||||||||||||| ||||||    
T  2268225 tttaattaagaaccatacaaaaaacacttaaggaattgtacctaatttttct 2268174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 363
Target Start/End: Complemental strand, 18236519 - 18236470
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||| |||||| |||| |||||||| ||||| |||||||||||||||||    
T  18236519 tttagctaagaatcataggaaaagcagctaagaaattgtacctaagtttt 18236470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 307
Target Start/End: Original strand, 2538467 - 2538507
Alignment:
Q  267 tataacaaactttgagaaaattatggatttaagaaaatcat 307  Q
    ||||||||||| |||||||||||||||||| | ||||||||    
T  2538467 tataacaaactctgagaaaattatggatttgaaaaaatcat 2538507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 10499947 - 10499979
Alignment:
Q  315 ttagttaagaaccatacgaaaagcacctaagga 347  Q
    |||||||||||||||||||||| ||||||||||    
T  10499947 ttagttaagaaccatacgaaaaacacctaagga 10499979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 314 - 370
Target Start/End: Complemental strand, 12807964 - 12807909
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    ||||||||| ||||||||||||| |||||||| |||||||  |||||||||| ||||    
T  12807964 tttagttaaaaaccatacgaaaaacacctaagaaattgta-ttaagttttctcctaa 12807909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 287
Target Start/End: Complemental strand, 42522949 - 42522900
Alignment:
Q  238 ttcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaat 287  Q
    ||||||||||||||||||||       |||||||||||||||||||||||    
T  42522949 ttcttaactaaaaatacatcttatttagatataacaaactttgagaaaat 42522900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 1e-45; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 2818697 - 2818835
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    ||||||||||||||||||||||||||||||        |||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  2818697 ttttcgtatgattcttaactaaaaatacatattttttggatatatcaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaac 2818796  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  2818797 catacgaaaaacacctaaagaattgtacctaagttttct 2818835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 24101972 - 24101834
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||    
T  24101972 ttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtatatttagttaagaac 24101873  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24101872 catacgaaaagcacctaaggaattgtacctaagttttct 24101834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 226 - 365
Target Start/End: Original strand, 45408655 - 45408794
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    ||||| ||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||| || |||||||||| |||||| |||||||    
T  45408655 ttttttgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtaaatttaattaagaa 45408754  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  45408755 ccatacgaaaagcacctaaggaattgtacctaagttttct 45408794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 3116907 - 3117045
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||    
T  3116907 ttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgagaaaatcataatgaatttagttaagaac 3117006  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||| ||| |||||||||||||||||||||    
T  3117007 catacgaaaagcagctatggaattgtacctaagttttct 3117045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 226 - 365
Target Start/End: Complemental strand, 1924122 - 1923982
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnng-atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaaga 324  Q
    ||||||||||| |||||||||||||||||||        | ||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  1924122 tttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggattcgaggaaatcatggtgaatttagttaaga 1924023  T
Q  325 accatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  1924022 accatacgaaaagcacctaagaaattgtacctaagttttct 1923982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 226 - 365
Target Start/End: Original strand, 34490486 - 34490625
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    ||||||||||| |||||||||||||||||||        |||||||||||||||||||||||||||||| | || ||||||||||   ||||||||||||    
T  34490486 tttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatctgaggaaatcatggtatttttagttaagaa 34490585  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34490586 ccatacgaaaagcacctaaggaattgtacctaagttttct 34490625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 9933709 - 9933572
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9933709 ttttcgtatggttcttaactaaaaatacatattttttagatataataaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaac 9933610  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||| |||||||| |||| ||||||||||||||||||||    
T  9933609 cataggaaaagca-ctaatgaattgtacctaagttttct 9933572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 16705764 - 16705902
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        ||||||||||||||||| |||||||||| ||| |||||||||| |||||||||||||| |||    
T  16705764 ttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgataaaattatggctttgagaaaatcatagtgaatttagttaaaaac 16705863  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  16705864 catacgaaaagcacctaaggaattgtacctaaattttct 16705902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 7737095 - 7737234
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnng-atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    |||| |||||||||||||||||||||||||        | ||||||||||||||||||||||||||| ||| || |||||||||| ||||||||||||||    
T  7737095 ttttggtatgattcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggctttgaggaaatcatggtaaatttagttaagaa 7737194  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
     |||||||||||||||||||||||||||||||||||||||    
T  7737195 tcatacgaaaagcacctaaggaattgtacctaagttttct 7737234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 227 - 363
Target Start/End: Complemental strand, 12850682 - 12850546
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||| || |||||||||| ||||||||||| |||    
T  12850682 ttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtaaatttagttaaaaac 12850583  T
Q  327 catacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||| ||||| |||||||||||||||||||| ||||    
T  12850582 catacaaaaagtacctaaggaattgtacctaaatttt 12850546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 226 - 365
Target Start/End: Original strand, 22269752 - 22269891
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    |||||||||||||| ||||||||||||||||        |||||||||||||||||||||||||||||||| || |||||||| |   ||||||||||||    
T  22269752 tttttcgtatgatttttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatgttttttttagttaagaa 22269851  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||| |||||||||||||| ||||||||||    
T  22269852 ccatacgaaaagcatctaaggaattgtacgtaagttttct 22269891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 42713918 - 42713779
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnng-atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    |||||| |||||||||||||||||||||||        | |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  42713918 ttttcgcatgattcttaactaaaaatacatatttttttggatataataaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaa 42713819  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||| ||||||||||||| || |||| ||||||    
T  42713818 ccatacgaaaaacacctaaggaattatatctaaattttct 42713779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 9281487 - 9281349
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||| ||        ||||||||||||||||||||||||||| |||| || ||||||| ||||||||||||||||||    
T  9281487 ttttcgtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaagaac 9281388  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||| |||||| ||||||||||||||||| |||||||||    
T  9281387 catatgaaaagtacctaaggaattgtaccaaagttttct 9281349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 226 - 344
Target Start/End: Complemental strand, 9850898 - 9850781
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    ||||||||||| |||||||||||||||||||        ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  9850898 tttttcgtatggttcttaactaaaaatacat-attttttgatataacaaattttgagaaaattatggatttaagaaaatcatggtaaatttagttaagaa 9850800  T
Q  326 ccatacgaaaagcacctaa 344  Q
    |||||||||||||||||||    
T  9850799 ccatacgaaaagcacctaa 9850781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 27920603 - 27920741
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    ||||||||||  |||||||||||| |||||        ||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||    
T  27920603 ttttcgtatgggtcttaactaaaactacatattttttggatataacaaactttgaaaaaattatggatttgaggaaatcatggtgaatttagttaagaac 27920702  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||| ||||  |||||||||||||||||||    
T  27920703 catacgaaaagcagctaaaaaattgtacctaagttttct 27920741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 265 - 370
Target Start/End: Original strand, 43476015 - 43476120
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    ||||||| ||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||    
T  43476015 gatataataaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaagaaccatacgaaaaacacctaaggaattatacctaaattttc 43476114  T
Q  365 ttctaa 370  Q
    | ||||    
T  43476115 tcctaa 43476120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 237 - 365
Target Start/End: Original strand, 6605776 - 6605903
Alignment:
Q  237 attcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaa 336  Q
    ||||||||||||||||||||        ||||||||||||||||||||||||||| |||| || |||||||||| ||||||| |||||||||||| ||||    
T  6605776 attcttaactaaaaatacatattatttggatataacaaactttgagaaaattatgcatttgaggaaatcatggtaaatttag-taagaaccatacaaaaa 6605874  T
Q  337 gcacctaaggaattgtacctaagttttct 365  Q
    |||||||| ||||||||||||||||||||    
T  6605875 gcacctaaagaattgtacctaagttttct 6605903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 227 - 368
Target Start/End: Original strand, 34455916 - 34456057
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| ||||||| |||||||||||        |||||||||||||||||||||||||| ||||| || |||| ||| |||||||| ||| ||||    
T  34455916 ttttcgtatggttcttaattaaaaatacatattttttggatataacaaactttgagaaaattatagatttgaggaaattatgatgaatttaattaggaac 34456015  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttcttct 368  Q
    |||||||||| ||| |||| |||||||||||| |||||||||    
T  34456016 catacgaaaaacacataagaaattgtacctaaattttcttct 34456057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 29229504 - 29229363
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaacttt-gagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    |||||||||| |||||||||||||||||||        ||||||| ||||||| ||||||||||||||||| || |||||||| ||||| ||||||||||    
T  29229504 ttttcgtatggttcttaactaaaaatacatattttttggatataataaacttttgagaaaattatggatttgaggaaatcatgatgaatatagttaagaa 29229405  T
Q  326 ccatacg--aaaagcacctaaggaattgtacctaagttttct 365  Q
     ||||||  |||||||| |||| |||||||||||||||||||    
T  29229404 tcatacgaaaaaagcacataagtaattgtacctaagttttct 29229363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 29342804 - 29342663
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaacttt-gagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    |||||||||| |||||||||||||||||||        ||||||| ||||||| ||||||||||||||||| || |||||||| ||||| ||||||||||    
T  29342804 ttttcgtatggttcttaactaaaaatacatattttttggatataataaacttttgagaaaattatggatttgaggaaatcatgatgaatatagttaagaa 29342705  T
Q  326 ccatacg--aaaagcacctaaggaattgtacctaagttttct 365  Q
     ||||||  |||||||| |||| |||||||||||||||||||    
T  29342704 tcatacgaaaaaagcacataagtaattgtacctaagttttct 29342663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 299 - 365
Target Start/End: Original strand, 10552984 - 10553050
Alignment:
Q  299 gaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  10552984 gaaaatcatggtgaatttagttaagaatcatacgaaaaacacctaaggaattgtacctaagttttct 10553050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 227 - 360
Target Start/End: Original strand, 7116401 - 7116534
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||| ||||||||||||| |       |||| ||||| ||||||||||||||||||||| |  |||| ||||| |||||| ||||||||    
T  7116401 ttttcgtatggttctcaactaaaaatacacctttgttggatagaacaatctttgagaaaattatggatttgatgaaattatggtaaatttatttaagaac 7116500  T
Q  327 catacgaaaagcacctaaggaattgtacctaagt 360  Q
    |||||||||| || ||||| ||||||||||||||    
T  7116501 catacgaaaaacatctaagaaattgtacctaagt 7116534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 16705786 - 16705723
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaattatatt 377  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  16705786 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctccttattatatt 16705723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 266 - 361
Target Start/End: Original strand, 40362553 - 40362647
Alignment:
Q  266 atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtt 361  Q
    |||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||   | ||| |||||||||||||    
T  40362553 atataacaaactatgagaaaattatg-atttgagaaaatcatggtgaatttagttaagaaccatacgaaaaacatacacggagttgtacctaagtt 40362647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 20892915 - 20893053
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnng-atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    |||||||||| |||||||||||||||||||        | ||||||||||||||||||||||||||||||| |  |||| || ||   ||||||||||||    
T  20892915 ttttcgtatggttcttaactaaaaatacatatttttatggatataacaaactttgagaaaattatggatttgatgaaattattgtatttttagttaagaa 20893014  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
     |||||||||||||||||||||||| || |||||||||||    
T  20893015 tcatacgaaaagcacctaaggaattata-ctaagttttct 20893053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 227 - 337
Target Start/End: Original strand, 23835907 - 23836018
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnng-atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    |||||||||| |||||||||||||||||||        | ||||||||||||||||||||||||||||||| || |||||||||| ||||| ||||| ||    
T  23835907 ttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtaaattttgttaaaaa 23836006  T
Q  326 ccatacgaaaag 337  Q
    ||||||||||||    
T  23836007 ccatacgaaaag 23836018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 314 - 371
Target Start/End: Original strand, 9281465 - 9281522
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaat 371  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  9281465 tttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttctcctaat 9281522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 314 - 370
Target Start/End: Original strand, 1924099 - 1924155
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  1924099 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctcctaa 1924155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 20892937 - 20892886
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20892937 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttct 20892886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 23835929 - 23835878
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23835929 tttagttaagaaccatacgaaaagcacctaaggaattgtacataagttttct 23835878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 24101950 - 24102001
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24101950 tttagttaagaaccatacgaaaagcacctaaggaattgtacttaagttttct 24102001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 34455938 - 34455887
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34455938 tttaattaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 34455887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 365
Target Start/End: Original strand, 43858548 - 43858603
Alignment:
Q  310 tgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  43858548 tgaatttagttaagaaccatacgaaaagtacctaaggaattgtacctaaattttct 43858603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 314 - 362
Target Start/End: Complemental strand, 2818719 - 2818671
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttt 362  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2818719 tttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttt 2818671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 314 - 370
Target Start/End: Complemental strand, 34490509 - 34490453
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||    
T  34490509 tttagttaagaaccatacgaaaaacacctaaagaattgtacctaagttttctcctaa 34490453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 3116929 - 3116878
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  3116929 tttagttaagaaccatacgaaaagcaccaaaagaattgtacctaagttttct 3116878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 9933687 - 9933738
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  9933687 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaaattttct 9933738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 266 - 353
Target Start/End: Complemental strand, 17500107 - 17500020
Alignment:
Q  266 atataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgta 353  Q
    |||||||||||||||| ||||| | |||||| |||| || |  |||||||||||||||||||||||||||| ||| |||| |||||||    
T  17500107 atataacaaactttgaaaaaataaaggatttgagaagattaccgtgaatttagttaagaaccatacgaaaaacacataagaaattgta 17500020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 45408678 - 45408627
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  45408678 tttagttaagaaccatacaaaaaacacctaaggaattgtacctaagttttct 45408627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 314 - 378
Target Start/End: Complemental strand, 7737117 - 7737053
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaattatatta 378  Q
    |||||||||||| ||||| ||||||||||||| |||||||||||||||||||  ||| |||||||    
T  7737117 tttagttaagaatcataccaaaagcacctaagaaattgtacctaagttttctcttaaatatatta 7737053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 12850660 - 12850711
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||||| || |||||||| |||||||||||||    
T  12850660 tttagttaagaaccatacgaaaagcatctgaggaattggacctaagttttct 12850711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 22269775 - 22269724
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||| || |||||||||| ||||||||||||||||||||||||||||    
T  22269775 tttagttaaaaatcatacgaaaaacacctaaggaattgtacctaagttttct 22269724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 314 - 371
Target Start/End: Complemental strand, 43475997 - 43475940
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaat 371  Q
    ||||||| | ||||||||||||| ||||| ||||||||||| ||||||||||||||||    
T  43475997 tttagtttaaaaccatacgaaaatcacctgaggaattgtacataagttttcttctaat 43475940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 27920625 - 27920575
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||| |||||||||||||||||||| ||||||| |||||||||||    
T  27920625 tttagttaagacccatacgaaaagcacctaagaaattgta-ctaagttttct 27920575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 42713896 - 42713947
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||| ||| |||||||||| |||| |||||||||||||||||||    
T  42713896 tttagttaagaatcatgcgaaaagcacttaagaaattgtacctaagttttct 42713947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 365
Target Start/End: Original strand, 8111692 - 8111742
Alignment:
Q  315 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||| ||||| ||||||| ||||||| |||||||||||    
T  8111692 ttagttaagaaccatacaaaaaggacctaagaaattgtaactaagttttct 8111742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 336
Target Start/End: Complemental strand, 17434766 - 17434728
Alignment:
Q  298 agaaaatcatggtgaatttagttaagaaccatacgaaaa 336  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  17434766 agaaaattatggtgaatttagttaagaaccatacgaaaa 17434728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 226 - 353
Target Start/End: Complemental strand, 39243124 - 39242997
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    ||||| ||||| ||||| |||||||||||| |       ||||||||||||||||| ||||| ||  |||| |  |||||| | | ||||||||||||||    
T  39243124 ttttttgtatggttcttgactaaaaatacacctatgttggatataacaaactttgataaaatcataaatttgatgaaatcacgataaatttagttaagaa 39243025  T
Q  326 ccatacgaaaagcacctaaggaattgta 353  Q
     ||||||||||  ||||||| |||||||    
T  39243024 tcatacgaaaaatacctaagaaattgta 39242997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 365
Target Start/End: Complemental strand, 6605777 - 6605740
Alignment:
Q  328 atacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  6605777 atacgaaaagcacataaggaattgtacctaagttttct 6605740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 314 - 363
Target Start/End: Complemental strand, 7116423 - 7116374
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 363  Q
    ||||||| |||||||||||||||| | |||| ||||||||||||||||||    
T  7116423 tttagttgagaaccatacgaaaagtatctaaagaattgtacctaagtttt 7116374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 29229482 - 29229532
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||| | |||| |||||||| |||||||||||    
T  29229482 tttagttaagaaccatacgaaaagtaactaaagaattgta-ctaagttttct 29229532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 29342782 - 29342832
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||| | |||| |||||||| |||||||||||    
T  29342782 tttagttaagaaccatacgaaaagtaactaaagaattgta-ctaagttttct 29342832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 9850875 - 9850922
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||||||| |||    |||||||||||||||||||||    
T  9850875 tttagttaagaaccatacgaaaaacac----ggaattgtacctaagttttct 9850922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 355
Target Start/End: Original strand, 17434798 - 17434840
Alignment:
Q  313 atttagttaagaaccatacgaaaagcacctaaggaattgtacc 355  Q
    ||||||||||||| |||||||||| || |||||||||||||||    
T  17434798 atttagttaagaatcatacgaaaaacatctaaggaattgtacc 17434840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 255
Target Start/End: Complemental strand, 20893025 - 20892997
Alignment:
Q  227 ttttcgtatgattcttaactaaaaataca 255  Q
    |||||||||||||||||||||||||||||    
T  20893025 ttttcgtatgattcttaactaaaaataca 20892997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 298 - 330
Target Start/End: Original strand, 26274474 - 26274506
Alignment:
Q  298 agaaaatcatggtgaatttagttaagaaccata 330  Q
    ||||||||||| |||||||||||||||||||||    
T  26274474 agaaaatcatgatgaatttagttaagaaccata 26274506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 91; Significance: 7e-44; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 226 - 365
Target Start/End: Original strand, 7116 - 7255
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    |||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||    
T  7116 tttttcgtatgattcttaactaaaaatatatatattttggatataacaaactttgagaaaattatggatttgaggaaatcatgatgaatttagttaagaa 7215  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||| |||||||| ||||||    
T  7216 ccatacgaaaagcacctaaggaatcgtacctaaattttct 7255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 314 - 370
Target Start/End: Complemental strand, 7139 - 7083
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    |||||||||||| |||||||||| ||||||||||||||||||||| |||||| ||||    
T  7139 tttagttaagaatcatacgaaaaacacctaaggaattgtacctaaattttctcctaa 7083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 86; Significance: 7e-41; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 51094 - 51232
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| |||||||||||||||| ||        ||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  51094 ttttcgtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatgaatttaaggaaatcatagtgaatttagttaagaac 51193  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||| |||||| |||||||||||||||||||||||||||    
T  51194 catatgaaaagtacctaaggaattgtacctaagttttct 51232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 51116 - 51065
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  51116 tttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttct 51065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 86; Significance: 7e-41; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 48157 - 48295
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| || |||| |||||||||||        |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  48157 ttttcgtatggtttttaattaaaaatacatattttttggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaac 48256  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
     |||||||||||| ||||||||||||| |||||||||||    
T  48257 tatacgaaaagcatctaaggaattgtatctaagttttct 48295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 3533 - 3395
Alignment:
Q  227 ttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaac 326  Q
    |||||||||| ||||||| |||||||||||        ||||||||||||||||| ||||||||  |||| || ||||||||||||||||| ||||||||    
T  3533 ttttcgtatggttcttaaataaaaatacatattttttggatataacaaactttgataaaattataaatttgaggaaatcatggtgaatttaattaagaac 3434  T
Q  327 catacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||| ||||||||| || ||||||||||||||||||||    
T  3433 catacaaaaagcaccaaatgaattgtacctaagttttct 3395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 3511 - 3562
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||| ||||||    
T  3511 tttatttaagaaccatacgaaaagtacctaaagaattgtacctaaattttct 3562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 69; Significance: 9e-31; HSPs: 2)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 265 - 365
Target Start/End: Complemental strand, 2041 - 1941
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||  |||| ||||||| |||||    
T  2041 gatataacaaactttgtgaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatacaaaaagcacctaaacaattatacctaaattttc 1942  T
Q  365 t 365  Q
    |    
T  1941 t 1941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 2058 - 2109
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  2058 tttagttaagaaccatataaaaagcacctaaggaattgtacctaagttttct 2109  T

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Target: scaffold0137 (Bit Score: 69; Significance: 9e-31; HSPs: 2)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 265 - 365
Target Start/End: Original strand, 10184 - 10284
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttc 364  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||  ||||||||||||| |||| |||||||||||| |||||    
T  10184 gatataacaaactttgagaaaattatggatgtgagaaaatcatggtgaatttacttaagaattatacgaaaagcacataagaaattgtacctaaattttc 10283  T
Q  365 t 365  Q
    |    
T  10284 t 10284  T

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Target: scaffold0137; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 10169 - 10118
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||||||||||||| ||| ||||||||||||| ||||||||||||||    
T  10169 tttagttaagaaccatacgcaaaacacctaaggaattatacctaagttttct 10118  T

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Target: scaffold0118 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 226 - 365
Target Start/End: Original strand, 14472 - 14611
Alignment:
Q  226 tttttcgtatgattcttaactaaaaatacatcnnnnnnngatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 325  Q
    |||||| |||| | |||||||||||||||||        ||||||||| |||||||||||||||||||| | |  || | ||||||||||||||||||||    
T  14472 tttttcctatggtacttaactaaaaatacatattatttggatataacagactttgagaaaattatggatatgacgaagtaatggtgaatttagttaagaa 14571  T
Q  326 ccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    | |||||||||||||| |||||||||||||||||||||||    
T  14572 cgatacgaaaagcacccaaggaattgtacctaagttttct 14611  T

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Target: scaffold0118; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 14495 - 14444
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    |||||||||| |||||| ||||| |||||||| |||||||||||||||||||    
T  14495 tttagttaagtaccataggaaaaacacctaagaaattgtacctaagttttct 14444  T

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Target: scaffold0018 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 265 - 357
Target Start/End: Complemental strand, 138379 - 138287
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtaccta 357  Q
    ||||||| ||||||| | |||| ||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||    
T  138379 gatataataaactttaaaaaaaatatggatttaagaaaatcatgatgaatttagttaagaatcatacgaaaagctcctaaggaattgtaccta 138287  T

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Target: scaffold0595 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 288 - 365
Target Start/End: Original strand, 5797 - 5876
Alignment:
Q  288 tatggatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaagg--aattgtacctaagttttct 365  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  5797 tatggatttgaggaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaaaattgtacctaagttttct 5876  T

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Target: scaffold0595; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 314 - 370
Target Start/End: Complemental strand, 5754 - 5698
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttcttctaa 370  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||    
T  5754 tttagttaagaaccatacgaaaagcacctaaagaattgtaccttagttttctcctaa 5698  T

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Target: scaffold0013 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 94241 - 94306
Alignment:
Q  265 gatataacaaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaaccata 330  Q
    ||||||||||||| |||||||||| ||||||| | |||||||||||||||||||||||||||||||    
T  94241 gatataacaaactatgagaaaattttggatttgataaaatcatggtgaatttagttaagaaccata 94306  T

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Target: scaffold0069 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 26458 - 26407
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26458 tttagttaataaccatacgaaaagcacctaaggaattgtacctaagttttct 26407  T

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Target: scaffold0006 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 298 - 361
Target Start/End: Complemental strand, 72357 - 72294
Alignment:
Q  298 agaaaatcatggtgaatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtt 361  Q
    ||||||| ||||||||||||| |||||| ||||| ||||||| |||||||||||||||||||||    
T  72357 agaaaattatggtgaatttagctaagaatcatacaaaaagcatctaaggaattgtacctaagtt 72294  T

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Target: scaffold0006; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 72389 - 72439
Alignment:
Q  314 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 365  Q
    ||||||||| ||||||||||||||||| |||||||||| | |||||||||||    
T  72389 tttagttaaaaaccatacgaaaagcacttaaggaattgca-ctaagttttct 72439  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 330
Target Start/End: Complemental strand, 90774 - 90738
Alignment:
Q  294 tttaagaaaatcatggtgaatttagttaagaaccata 330  Q
    |||||| |||||||||| |||||||||||||||||||    
T  90774 tttaaggaaatcatggtaaatttagttaagaaccata 90738  T

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