View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2815_high_5 (Length: 425)
Name: NF2815_high_5
Description: NF2815
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2815_high_5 |
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Alignment Details
Target: chr8 (Bit Score: 319; Significance: 1e-180; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 76 - 417
Target Start/End: Original strand, 41654822 - 41655161
Alignment:
| Q |
76 |
gatcggttgaacaaacatgaatcaaatcagtttattccaattttgagagattatgaataaaaaattattgaaccaatcgagagaccaacaagtttctgaa |
175 |
Q |
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| T |
41654822 |
gatcggttgaacaaacatgaatcaaatcagtttattccaattttgagagattatgaataaaaaattattgaaccaatcgagagactaacaggtttctgaa |
41654921 |
T |
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| Q |
176 |
tcgaccaagtagtatcaaatattgaataataatgaagttagtatttaaaaaatattatcataacagctttttggatctttgcgagctatgcttgtcttta |
275 |
Q |
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| T |
41654922 |
tcgaccaagtagtatcaaatattgaataataatgaagttagtatttaaaaaatattatcataacagctttttg--tctttgcgagctatgcttgtcttta |
41655019 |
T |
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| Q |
276 |
aaggtatggtaatgatgatgataatccaagaatggaattacactgcaaaacagtttattttagtttagctttatgtctacgacttgcgaactaattggat |
375 |
Q |
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| T |
41655020 |
aaggtatggtaatgatgatgataatccaagaatggaattaaactgcaaaacagtttattttagtttagctttatgtctacgacttgcgaactaattggat |
41655119 |
T |
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| Q |
376 |
ccaccagacgtaaagttctacaacaaatgtataattcatctc |
417 |
Q |
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| T |
41655120 |
ccaccagacgtaaagttctacaacaaatgtataattcatctc |
41655161 |
T |
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