View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2815_high_7 (Length: 418)

Name: NF2815_high_7
Description: NF2815
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2815_high_7
NF2815_high_7
[»] scaffold0132 (4 HSPs)
scaffold0132 (1-209)||(2485-2685)
scaffold0132 (1-209)||(10445-10645)
scaffold0132 (119-292)||(2694-2867)
scaffold0132 (119-292)||(10654-10827)
[»] chr8 (52 HSPs)
chr8 (130-329)||(33616659-33616863)
chr8 (136-323)||(19429979-19430171)
chr8 (136-323)||(19435481-19435673)
chr8 (136-323)||(19566128-19566320)
chr8 (136-323)||(19571630-19571822)
chr8 (130-292)||(31030528-31030691)
chr8 (1-128)||(19430635-19430762)
chr8 (1-128)||(19566784-19566911)
chr8 (1-128)||(19436077-19436204)
chr8 (1-128)||(19572226-19572353)
chr8 (151-329)||(13584310-13584499)
chr8 (1-128)||(13584772-13584899)
chr8 (1-117)||(31031171-31031285)
chr8 (1-128)||(33616128-33616254)
chr8 (191-292)||(42514368-42514469)
chr8 (190-292)||(17955782-17955884)
chr8 (190-288)||(21644074-21644172)
chr8 (190-292)||(32015700-32015802)
chr8 (190-292)||(24884712-24884815)
chr8 (190-292)||(43999223-43999325)
chr8 (197-292)||(31449866-31449962)
chr8 (197-292)||(38182237-38182333)
chr8 (197-292)||(44925923-44926019)
chr8 (197-292)||(15875668-15875764)
chr8 (197-292)||(19166633-19166729)
chr8 (197-292)||(40125885-40125981)
chr8 (197-292)||(17025934-17026030)
chr8 (197-292)||(17556426-17556522)
chr8 (197-292)||(18876367-18876462)
chr8 (197-292)||(24090626-24090722)
chr8 (197-292)||(33416546-33416642)
chr8 (197-293)||(43302718-43302816)
chr8 (199-292)||(1807471-1807565)
chr8 (197-292)||(34118465-34118561)
chr8 (197-292)||(36683578-36683674)
chr8 (197-290)||(1910969-1911063)
chr8 (199-292)||(28559656-28559750)
chr8 (243-292)||(40130733-40130782)
chr8 (197-292)||(2965629-2965725)
chr8 (197-292)||(17953873-17953969)
chr8 (79-118)||(21641298-21641337)
chr8 (79-118)||(24885260-24885299)
chr8 (79-118)||(42514020-42514059)
chr8 (219-292)||(4238337-4238411)
chr8 (219-292)||(4243076-4243150)
chr8 (246-292)||(32010538-32010584)
chr8 (219-292)||(37771711-37771785)
chr8 (259-292)||(15951584-15951617)
chr8 (221-292)||(34818722-34818794)
chr8 (79-116)||(17955306-17955343)
chr8 (256-292)||(23548692-23548728)
chr8 (197-241)||(29220315-29220359)
[»] chr6 (64 HSPs)
chr6 (130-292)||(19478148-19478310)
chr6 (130-292)||(13605025-13605187)
chr6 (1-128)||(19478740-19478867)
chr6 (130-292)||(31495774-31495936)
chr6 (130-292)||(31501160-31501322)
chr6 (5-128)||(17280925-17281048)
chr6 (190-292)||(21396699-21396801)
chr6 (190-292)||(22698236-22698338)
chr6 (190-292)||(24192473-24192575)
chr6 (190-292)||(29491230-29491332)
chr6 (130-292)||(31515664-31515826)
chr6 (190-292)||(34142080-34142182)
chr6 (190-292)||(34154696-34154798)
chr6 (5-128)||(17289672-17289795)
chr6 (190-292)||(24191376-24191478)
chr6 (190-292)||(31981560-31981662)
chr6 (5-128)||(10485701-10485824)
chr6 (190-292)||(34375919-34376021)
chr6 (195-292)||(12182998-12183096)
chr6 (190-292)||(22703359-22703461)
chr6 (203-292)||(21401755-21401844)
chr6 (175-292)||(31475993-31476110)
chr6 (182-292)||(3901912-3902023)
chr6 (190-288)||(2818140-2818238)
chr6 (9-98)||(29326228-29326317)
chr6 (5-105)||(3902847-3902947)
chr6 (130-292)||(17281495-17281659)
chr6 (196-292)||(5600971-5601068)
chr6 (197-292)||(11570749-11570845)
chr6 (191-292)||(10642709-10642811)
chr6 (5-119)||(13660408-13660521)
chr6 (26-128)||(28696922-28697027)
chr6 (197-292)||(6407860-6407956)
chr6 (197-292)||(12688970-12689066)
chr6 (197-292)||(24589164-24589260)
chr6 (197-292)||(33687603-33687699)
chr6 (5-90)||(11956127-11956212)
chr6 (197-292)||(2700106-2700202)
chr6 (197-292)||(8747781-8747877)
chr6 (197-292)||(12406353-12406449)
chr6 (197-292)||(21309030-21309126)
chr6 (232-292)||(11428042-11428104)
chr6 (197-271)||(17964559-17964634)
chr6 (199-281)||(22713705-22713788)
chr6 (182-292)||(29325535-29325646)
chr6 (79-118)||(34142717-34142756)
chr6 (79-118)||(34155333-34155372)
chr6 (79-118)||(34376400-34376439)
chr6 (79-118)||(2817573-2817612)
chr6 (197-271)||(16836156-16836231)
chr6 (57-128)||(22713938-22714009)
chr6 (79-118)||(31982115-31982154)
chr6 (199-292)||(5740792-5740886)
chr6 (1-42)||(14450660-14450701)
chr6 (86-118)||(6727956-6727988)
chr6 (256-292)||(11534738-11534774)
chr6 (256-292)||(11560248-11560284)
chr6 (197-241)||(11614092-11614136)
chr6 (197-292)||(13736678-13736774)
chr6 (257-292)||(11956762-11956797)
chr6 (257-292)||(19674312-19674347)
chr6 (79-118)||(24190827-24190866)
chr6 (259-292)||(6728397-6728430)
chr6 (197-292)||(29892261-29892357)
[»] chr4 (74 HSPs)
chr4 (130-292)||(10120742-10120904)
chr4 (136-292)||(653043-653200)
chr4 (1-128)||(10119870-10119997)
chr4 (8-126)||(653592-653710)
chr4 (130-290)||(8082959-8083121)
chr4 (190-292)||(8980278-8980380)
chr4 (190-292)||(8985398-8985500)
chr4 (190-292)||(13700510-13700612)
chr4 (190-292)||(21299826-21299928)
chr4 (190-292)||(54991486-54991588)
chr4 (329-418)||(31048380-31048469)
chr4 (190-292)||(21304946-21305048)
chr4 (190-292)||(36354176-36354278)
chr4 (190-292)||(36359294-36359396)
chr4 (190-292)||(39999069-39999171)
chr4 (190-292)||(40004027-40004129)
chr4 (190-292)||(41393245-41393347)
chr4 (190-292)||(51019366-51019468)
chr4 (190-292)||(53797629-53797731)
chr4 (190-292)||(54343203-54343305)
chr4 (190-292)||(54348357-54348459)
chr4 (194-292)||(13695159-13695257)
chr4 (190-292)||(13710669-13710770)
chr4 (190-292)||(47046300-47046402)
chr4 (5-122)||(24490702-24490819)
chr4 (130-292)||(24490031-24490195)
chr4 (190-291)||(9764014-9764115)
chr4 (4-110)||(10318245-10318350)
chr4 (197-292)||(5271419-5271515)
chr4 (197-292)||(13521992-13522088)
chr4 (197-292)||(31269033-31269129)
chr4 (197-292)||(31273520-31273616)
chr4 (197-292)||(37259877-37259973)
chr4 (197-292)||(37264564-37264660)
chr4 (197-292)||(31765885-31765981)
chr4 (197-292)||(8693710-8693806)
chr4 (197-292)||(16421028-16421124)
chr4 (197-292)||(33463356-33463452)
chr4 (197-290)||(31729387-31729481)
chr4 (197-292)||(5928219-5928315)
chr4 (197-292)||(12823895-12823991)
chr4 (195-286)||(30564412-30564504)
chr4 (198-292)||(42758756-42758851)
chr4 (76-118)||(9763442-9763484)
chr4 (195-292)||(34644557-34644655)
chr4 (197-292)||(10318779-10318875)
chr4 (197-292)||(33468973-33469069)
chr4 (197-292)||(51697916-51698012)
chr4 (197-292)||(55251719-55251814)
chr4 (79-118)||(13711306-13711345)
chr4 (79-118)||(41393796-41393835)
chr4 (219-292)||(39319631-39319705)
chr4 (197-281)||(8030476-8030561)
chr4 (82-122)||(15451783-15451823)
chr4 (81-116)||(4206980-4207015)
chr4 (191-277)||(17359546-17359633)
chr4 (79-129)||(53798253-53798304)
chr4 (215-292)||(13065786-13065864)
chr4 (197-290)||(19101978-19102072)
chr4 (73-110)||(30563830-30563867)
chr4 (220-289)||(31099280-31099352)
chr4 (256-292)||(12878238-12878274)
chr4 (197-292)||(19106618-19106714)
chr4 (225-292)||(51697001-51697069)
chr4 (73-115)||(17682359-17682402)
chr4 (222-292)||(34560497-34560568)
chr4 (79-118)||(47045792-47045830)
chr4 (219-292)||(3998078-3998152)
chr4 (262-292)||(32221163-32221193)
chr4 (197-269)||(16953107-16953180)
chr4 (256-292)||(13059409-13059445)
chr4 (79-119)||(17360085-17360125)
chr4 (256-292)||(47244247-47244283)
chr4 (197-292)||(47574624-47574720)
[»] chr5 (59 HSPs)
chr5 (136-329)||(14374093-14374292)
chr5 (136-329)||(7805029-7805228)
chr5 (136-329)||(24435807-24436006)
chr5 (136-331)||(13582628-13582830)
chr5 (6-128)||(14374726-14374848)
chr5 (6-128)||(7805675-7805797)
chr5 (8-128)||(13582053-13582173)
chr5 (190-292)||(17510058-17510160)
chr5 (190-292)||(24771350-24771452)
chr5 (190-292)||(36253826-36253928)
chr5 (190-292)||(42019573-42019675)
chr5 (190-292)||(17504953-17505055)
chr5 (190-292)||(41858593-41858695)
chr5 (197-292)||(1414051-1414146)
chr5 (190-292)||(24776805-24776910)
chr5 (190-292)||(41853548-41853650)
chr5 (190-292)||(26709102-26709206)
chr5 (190-292)||(26978836-26978940)
chr5 (197-292)||(26667271-26667367)
chr5 (197-292)||(26938868-26938964)
chr5 (197-292)||(29167973-29168069)
chr5 (197-292)||(556694-556790)
chr5 (197-292)||(561466-561562)
chr5 (197-292)||(12103024-12103120)
chr5 (197-292)||(36423636-36423732)
chr5 (197-292)||(36428708-36428804)
chr5 (197-292)||(36937511-36937607)
chr5 (197-292)||(36942265-36942361)
chr5 (197-292)||(37248795-37248891)
chr5 (197-292)||(7451757-7451853)
chr5 (197-292)||(32461549-32461645)
chr5 (197-292)||(39518409-39518505)
chr5 (197-292)||(39523048-39523144)
chr5 (197-292)||(42001433-42001529)
chr5 (197-292)||(28857861-28857958)
chr5 (197-292)||(6514601-6514697)
chr5 (197-292)||(10759820-10759915)
chr5 (197-292)||(12045139-12045235)
chr5 (197-292)||(12501899-12501995)
chr5 (197-292)||(41996664-41996760)
chr5 (197-292)||(3665931-3666027)
chr5 (197-292)||(12041932-12042028)
chr5 (199-292)||(40147894-40147988)
chr5 (197-281)||(35679875-35679960)
chr5 (197-292)||(12102831-12102927)
chr5 (193-292)||(13301482-13301581)
chr5 (197-292)||(37652830-37652926)
chr5 (197-292)||(41587160-41587256)
chr5 (10-128)||(9361776-9361892)
chr5 (79-118)||(24776231-24776270)
chr5 (79-118)||(36254453-36254492)
chr5 (197-292)||(6155419-6155515)
chr5 (197-292)||(31986726-31986822)
chr5 (79-118)||(24770777-24770816)
chr5 (191-292)||(21323960-21324061)
chr5 (57-127)||(31987350-31987420)
chr5 (256-292)||(20181123-20181159)
chr5 (90-118)||(1413258-1413286)
chr5 (197-241)||(37550032-37550076)
[»] chr1 (60 HSPs)
chr1 (136-329)||(10106061-10106260)
chr1 (136-329)||(13890771-13890970)
chr1 (130-292)||(14582099-14582261)
chr1 (130-292)||(5602358-5602520)
chr1 (151-292)||(38734275-38734416)
chr1 (130-292)||(26651099-26651261)
chr1 (130-292)||(19422807-19422973)
chr1 (1-128)||(26650492-26650618)
chr1 (1-118)||(31289367-31289484)
chr1 (4-128)||(13891407-13891531)
chr1 (1-128)||(38734728-38734855)
chr1 (1-128)||(39746738-39746865)
chr1 (6-128)||(10106643-10106765)
chr1 (185-292)||(39747153-39747260)
chr1 (190-292)||(11251106-11251208)
chr1 (190-292)||(37404409-37404511)
chr1 (190-292)||(36684708-36684810)
chr1 (190-292)||(37409530-37409632)
chr1 (190-292)||(3584601-3584703)
chr1 (190-292)||(5724979-5725081)
chr1 (190-292)||(27716443-27716545)
chr1 (192-292)||(34318219-34318319)
chr1 (190-292)||(5730105-5730207)
chr1 (40-128)||(19406284-19406372)
chr1 (190-270)||(48246676-48246756)
chr1 (208-292)||(11387841-11387925)
chr1 (1-81)||(14582397-14582477)
chr1 (197-292)||(51041463-51041557)
chr1 (197-292)||(10135455-10135551)
chr1 (197-292)||(23192817-23192913)
chr1 (197-292)||(40165979-40166075)
chr1 (208-277)||(27711319-27711388)
chr1 (197-292)||(19799013-19799109)
chr1 (197-288)||(33301180-33301272)
chr1 (5-122)||(12179309-12179431)
chr1 (197-292)||(16035607-16035703)
chr1 (197-292)||(16649613-16649708)
chr1 (197-292)||(47451225-47451321)
chr1 (197-292)||(47455386-47455482)
chr1 (191-292)||(41097946-41098047)
chr1 (197-292)||(10140088-10140184)
chr1 (197-292)||(12259995-12260091)
chr1 (79-118)||(48246144-48246183)
chr1 (219-292)||(3094113-3094187)
chr1 (221-292)||(8267853-8267926)
chr1 (243-292)||(25855170-25855219)
chr1 (197-292)||(18784549-18784644)
chr1 (213-292)||(26927738-26927818)
chr1 (200-290)||(39588370-39588461)
chr1 (80-118)||(5730707-5730745)
chr1 (191-292)||(33055038-33055139)
chr1 (259-292)||(16832100-16832133)
chr1 (229-292)||(4632958-4633022)
chr1 (197-292)||(25188272-25188368)
chr1 (83-118)||(3585237-3585272)
chr1 (194-280)||(12906166-12906251)
chr1 (73-128)||(14724909-14724964)
chr1 (195-280)||(24159797-24159882)
chr1 (80-118)||(29825877-29825915)
chr1 (197-280)||(2493818-2493901)
[»] chr7 (60 HSPs)
chr7 (130-332)||(24528310-24528517)
chr7 (130-292)||(9973462-9973624)
chr7 (136-329)||(33226373-33226571)
chr7 (130-329)||(28292436-28292638)
chr7 (1-128)||(28291906-28292033)
chr7 (1-129)||(24528991-24529119)
chr7 (1-128)||(7357936-7358063)
chr7 (190-292)||(16539405-16539507)
chr7 (190-292)||(16626155-16626257)
chr7 (190-292)||(42571945-42572047)
chr7 (190-292)||(33238002-33238104)
chr7 (190-292)||(47998975-47999077)
chr7 (1-128)||(33226928-33227048)
chr7 (190-292)||(2234623-2234725)
chr7 (190-292)||(12934397-12934499)
chr7 (190-292)||(17495403-17495505)
chr7 (190-292)||(17557709-17557811)
chr7 (190-292)||(32212647-32212749)
chr7 (190-292)||(33243179-33243281)
chr7 (190-292)||(47177112-47177214)
chr7 (190-292)||(47993800-47993902)
chr7 (190-292)||(43892858-43892960)
chr7 (190-283)||(19309604-19309697)
chr7 (190-292)||(21081032-21081136)
chr7 (1-84)||(9973915-9973998)
chr7 (197-292)||(4579507-4579603)
chr7 (199-292)||(3357634-3357728)
chr7 (197-292)||(9650967-9651063)
chr7 (197-292)||(23246933-23247029)
chr7 (197-292)||(23866067-23866163)
chr7 (197-292)||(26341198-26341294)
chr7 (197-292)||(4930232-4930328)
chr7 (197-292)||(8076049-8076145)
chr7 (197-292)||(13314236-13314332)
chr7 (197-292)||(10388367-10388461)
chr7 (225-292)||(22857715-22857782)
chr7 (197-292)||(44423137-44423233)
chr7 (4-95)||(47762348-47762438)
chr7 (191-292)||(27256242-27256343)
chr7 (197-292)||(8268292-8268388)
chr7 (197-292)||(12254078-12254174)
chr7 (197-292)||(44510677-44510773)
chr7 (79-118)||(16538845-16538884)
chr7 (79-118)||(16626778-16626817)
chr7 (79-118)||(17496036-17496075)
chr7 (79-118)||(17557139-17557178)
chr7 (214-288)||(42627214-42627289)
chr7 (79-118)||(43893478-43893517)
chr7 (213-292)||(47760985-47761069)
chr7 (197-292)||(27238241-27238337)
chr7 (79-118)||(12935020-12935059)
chr7 (79-115)||(21080493-21080529)
chr7 (79-111)||(42572543-42572575)
chr7 (79-118)||(2234124-2234163)
chr7 (79-118)||(19309048-19309087)
chr7 (79-118)||(32212137-32212176)
chr7 (246-292)||(16372397-16372443)
chr7 (195-292)||(19640298-19640395)
chr7 (199-292)||(29150933-29151027)
chr7 (197-241)||(6590983-6591027)
[»] chr3 (83 HSPs)
chr3 (130-292)||(20810372-20810534)
chr3 (130-292)||(33089276-33089438)
chr3 (136-329)||(13021985-13022184)
chr3 (131-292)||(26962059-26962220)
chr3 (130-329)||(53119486-53119690)
chr3 (1-128)||(53120123-53120250)
chr3 (1-128)||(13022651-13022778)
chr3 (1-128)||(33088680-33088807)
chr3 (153-292)||(38436947-38437086)
chr3 (5-114)||(26962640-26962749)
chr3 (1-128)||(38436334-38436461)
chr3 (190-292)||(3476939-3477041)
chr3 (190-292)||(17368719-17368821)
chr3 (190-293)||(34129162-34129265)
chr3 (190-292)||(20090655-20090757)
chr3 (190-292)||(20095780-20095882)
chr3 (4-120)||(26929322-26929438)
chr3 (190-292)||(15763023-15763125)
chr3 (190-292)||(15768184-15768286)
chr3 (190-292)||(55128790-55128892)
chr3 (196-292)||(54270644-54270740)
chr3 (190-292)||(3482416-3482518)
chr3 (190-292)||(4117593-4117695)
chr3 (190-292)||(17364063-17364167)
chr3 (190-292)||(17357836-17357940)
chr3 (195-292)||(27605133-27605231)
chr3 (190-292)||(30341837-30341939)
chr3 (197-292)||(758368-758464)
chr3 (1-128)||(20811014-20811141)
chr3 (197-292)||(23666123-23666219)
chr3 (197-292)||(24038371-24038467)
chr3 (197-292)||(39775728-39775824)
chr3 (197-292)||(8069677-8069772)
chr3 (182-292)||(21494287-21494398)
chr3 (196-292)||(2617255-2617352)
chr3 (197-292)||(3672583-3672679)
chr3 (197-292)||(3692615-3692711)
chr3 (5-85)||(11777219-11777299)
chr3 (197-292)||(14438695-14438791)
chr3 (197-292)||(18467222-18467318)
chr3 (197-292)||(20520051-20520147)
chr3 (5-98)||(6025709-6025802)
chr3 (190-290)||(10321444-10321545)
chr3 (197-292)||(7571218-7571314)
chr3 (197-292)||(49971424-49971520)
chr3 (197-291)||(8883168-8883263)
chr3 (197-292)||(3033641-3033737)
chr3 (197-292)||(3418992-3419088)
chr3 (199-272)||(26706803-26706877)
chr3 (197-292)||(32474680-32474774)
chr3 (197-292)||(8887927-8888023)
chr3 (197-288)||(12112641-12112733)
chr3 (197-292)||(12965873-12965969)
chr3 (244-292)||(25726841-25726889)
chr3 (221-290)||(1688910-1688980)
chr3 (191-292)||(10586177-10586278)
chr3 (197-292)||(18472005-18472100)
chr3 (197-292)||(29350237-29350333)
chr3 (197-292)||(55431312-55431408)
chr3 (79-118)||(3476364-3476403)
chr3 (79-118)||(4117122-4117161)
chr3 (79-118)||(54271255-54271294)
chr3 (57-122)||(2616931-2616996)
chr3 (4-84)||(21493714-21493795)
chr3 (197-292)||(29715641-29715737)
chr3 (191-238)||(795399-795446)
chr3 (79-118)||(30338272-30338311)
chr3 (79-118)||(30341376-30341415)
chr3 (190-292)||(45904442-45904544)
chr3 (221-289)||(23074433-23074502)
chr3 (243-292)||(27708875-27708924)
chr3 (197-238)||(27708988-27709029)
chr3 (197-288)||(12971633-12971725)
chr3 (197-241)||(23661464-23661508)
chr3 (79-118)||(3481821-3481860)
chr3 (79-118)||(17358502-17358541)
chr3 (83-122)||(25023431-25023470)
chr3 (190-292)||(45904898-45905000)
chr3 (258-292)||(2207769-2207803)
chr3 (219-292)||(31002697-31002770)
chr3 (73-118)||(27604588-27604633)
chr3 (240-284)||(6024127-6024171)
chr3 (225-288)||(13474707-13474771)
[»] chr2 (45 HSPs)
chr2 (130-292)||(5089278-5089440)
chr2 (130-292)||(42914642-42914804)
chr2 (1-129)||(42915164-42915292)
chr2 (16-128)||(5089680-5089792)
chr2 (190-292)||(42723444-42723546)
chr2 (190-292)||(42728613-42728715)
chr2 (190-292)||(44096302-44096404)
chr2 (190-292)||(44754589-44754691)
chr2 (190-292)||(44759755-44759857)
chr2 (190-292)||(40518465-40518567)
chr2 (190-292)||(28751722-28751824)
chr2 (192-292)||(40392319-40392419)
chr2 (197-292)||(10160724-10160820)
chr2 (197-292)||(30658262-30658358)
chr2 (197-292)||(1934993-1935089)
chr2 (197-292)||(9180724-9180820)
chr2 (197-292)||(18344430-18344526)
chr2 (197-292)||(25497325-25497421)
chr2 (197-292)||(9189803-9189899)
chr2 (197-292)||(30650928-30651024)
chr2 (57-128)||(39959775-39959846)
chr2 (7-101)||(43111535-43111629)
chr2 (197-292)||(12796924-12797020)
chr2 (197-292)||(25478297-25478393)
chr2 (197-292)||(31326738-31326834)
chr2 (199-292)||(29677380-29677474)
chr2 (197-292)||(7737851-7737947)
chr2 (197-292)||(19892466-19892562)
chr2 (201-292)||(42926763-42926857)
chr2 (220-292)||(19538385-19538458)
chr2 (197-292)||(19578414-19578510)
chr2 (197-288)||(35601925-35602017)
chr2 (219-292)||(6297907-6297981)
chr2 (191-292)||(11658882-11658984)
chr2 (196-292)||(160040-160137)
chr2 (220-292)||(28855004-28855077)
chr2 (197-288)||(35638997-35639089)
chr2 (195-269)||(28945191-28945266)
chr2 (191-292)||(39542901-39543004)
chr2 (213-292)||(21523736-21523815)
chr2 (256-292)||(28603297-28603333)
chr2 (201-292)||(39542509-39542601)
chr2 (197-290)||(29907368-29907458)
chr2 (199-292)||(29677766-29677860)
chr2 (225-290)||(40033794-40033860)
[»] scaffold0011 (5 HSPs)
scaffold0011 (130-290)||(1567-1728)
scaffold0011 (130-292)||(7046-7209)
scaffold0011 (1-128)||(2228-2356)
scaffold0011 (1-109)||(7501-7610)
scaffold0011 (256-288)||(155555-155587)
[»] scaffold0166 (4 HSPs)
scaffold0166 (190-292)||(13733-13835)
scaffold0166 (190-292)||(19188-19293)
scaffold0166 (79-118)||(13158-13197)
scaffold0166 (79-118)||(18615-18654)
[»] scaffold0014 (2 HSPs)
scaffold0014 (190-292)||(31545-31647)
scaffold0014 (192-292)||(26373-26473)
[»] scaffold0594 (2 HSPs)
scaffold0594 (190-292)||(9201-9303)
scaffold0594 (81-118)||(8708-8745)
[»] scaffold0517 (1 HSPs)
scaffold0517 (190-292)||(3563-3665)
[»] scaffold0060 (2 HSPs)
scaffold0060 (190-292)||(37010-37112)
scaffold0060 (86-118)||(37591-37623)
[»] scaffold0055 (1 HSPs)
scaffold0055 (190-292)||(3058-3160)
[»] scaffold0052 (1 HSPs)
scaffold0052 (190-292)||(81375-81477)
[»] scaffold0067 (2 HSPs)
scaffold0067 (5-128)||(33367-33490)
scaffold0067 (197-292)||(33968-34064)
[»] scaffold0352 (1 HSPs)
scaffold0352 (197-292)||(7103-7199)
[»] scaffold0182 (1 HSPs)
scaffold0182 (197-292)||(9887-9983)
[»] scaffold0002 (2 HSPs)
scaffold0002 (197-292)||(4073-4169)
scaffold0002 (197-264)||(443945-444011)
[»] scaffold0045 (1 HSPs)
scaffold0045 (197-292)||(83065-83161)
[»] scaffold0012 (1 HSPs)
scaffold0012 (197-292)||(166086-166182)
[»] scaffold0057 (1 HSPs)
scaffold0057 (197-286)||(35639-35729)
[»] scaffold0020 (1 HSPs)
scaffold0020 (219-292)||(1247-1321)
[»] scaffold0008 (1 HSPs)
scaffold0008 (197-287)||(255821-255912)
[»] scaffold0061 (1 HSPs)
scaffold0061 (191-292)||(45784-45885)
[»] scaffold0017 (1 HSPs)
scaffold0017 (191-292)||(152902-153003)
[»] scaffold0027 (1 HSPs)
scaffold0027 (197-271)||(43124-43199)
[»] scaffold0041 (1 HSPs)
scaffold0041 (218-292)||(35676-35750)
[»] scaffold0018 (1 HSPs)
scaffold0018 (192-280)||(171711-171798)


Alignment Details
Target: scaffold0132 (Bit Score: 152; Significance: 2e-80; HSPs: 4)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 2485 - 2685
Alignment:
Q  1 gtgagtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggt 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2485 gtgagtgtgtgacttaaaaatgtcccacattgttgagccacaccaactagaaagtatttatataagggtagagtgacctccaagggtgtgcccttggggt 2584  T
Q  101 acccacttttgtgaacgggtgaacgcttgtatttagaggtgtatatctcaagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgtt 200  Q
    ||||||||||        |||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  2585 acccactttt--------gtgaacgcttttatttagagatgtatatctcaagcgattgtatactgtgcagtgtataatcgtcacagtggtctgggctgtt 2676  T
Q  201 ttatcctgg 209  Q
    |||||||||    
T  2677 ttatcctgg 2685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 10445 - 10645
Alignment:
Q  1 gtgagtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggt 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10445 gtgagtgtgtgacttaaaaatgtcccacattgttgagccacaccaactagaaagtatttatataagggtagagtgacctccaagggtgtgcccttggggt 10544  T
Q  101 acccacttttgtgaacgggtgaacgcttgtatttagaggtgtatatctcaagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgtt 200  Q
    ||||||||||        |||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  10545 acccactttt--------gtgaacgcttttatttagagatgtatatctcaagcgattgtatactgtgcagtgtataatcgtcacagtggtctgggctgtt 10636  T
Q  201 ttatcctgg 209  Q
    |||||||||    
T  10637 ttatcctgg 10645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #3
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 119 - 292
Target Start/End: Original strand, 2694 - 2867
Alignment:
Q  119 gtgaacgcttgtatttagaggtgtatatctcaagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgt 218  Q
    |||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2694 gtgaacgcttttatttagagatgtatatctcaagcgattgtatactgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgt 2793  T
Q  219 ggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||||||||| |||||||||||||||||||    
T  2794 ggttgttagtctaccttgcacaacttgggtagtgtcacgaaacgtcttaaagagcgcgacctggtcgtgactca 2867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #4
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 119 - 292
Target Start/End: Original strand, 10654 - 10827
Alignment:
Q  119 gtgaacgcttgtatttagaggtgtatatctcaagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgt 218  Q
    |||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10654 gtgaacgcttttatttagagatgtatatctcaagcgattgtatactgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgt 10753  T
Q  219 ggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||||||||| |||||||||||||||||||    
T  10754 ggttgttagtctaccttgcacaacttgggtagtgtcacgaaacgtcttaaagagcgcgacctggtcgtgactca 10827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 140; Significance: 3e-73; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 130 - 329
Target Start/End: Original strand, 33616659 - 33616863
Alignment:
Q  130 tatttagaggtgtatatct-caagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagt 228  Q
    ||||| ||||||||||||| | |||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  33616659 tatttcgaggtgtatatctacgagcgattgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcctggagacggcgtggttgttagt 33616758  T
Q  229 ctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca----gtaatttcttttggcagtactaatttcaaaaa 324  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    |  | |||||||||||||| ||||||||||||    
T  33616759 ctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaatccgataattcttttggcagtattaatttcaaaaa 33616858  T
Q  325 caaca 329  Q
    |||||    
T  33616859 caaca 33616863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 136 - 323
Target Start/End: Complemental strand, 19430171 - 19429979
Alignment:
Q  136 gaggtgtatatct-caagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtctacct 234  Q
    ||||||||||||| | ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  19430171 gaggtgtatatctacgagcgattgtatattgtgcagtatataatcgtaacagtgatctgggctgttttatcctagagacggcgtggttgttagtctacct 19430072  T
Q  235 tgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca-----gtaatttcttttggcagtactaatttcaaaa 323  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||     |||| ||| ||||||||||||||||||||||    
T  19430071 tgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacccggtaa-ttcctttggcagtactaatttcaaaa 19429979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 136 - 323
Target Start/End: Complemental strand, 19435673 - 19435481
Alignment:
Q  136 gaggtgtatatct-caagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtctacct 234  Q
    ||||||||||||| | ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  19435673 gaggtgtatatctacgagcgattgtatattgtgcagtatataatcgtaacagtgatctgggctgttttatcctagagacggcgtggttgttagtctacct 19435574  T
Q  235 tgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca-----gtaatttcttttggcagtactaatttcaaaa 323  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||     |||| ||| ||||||||||||||||||||||    
T  19435573 tgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacccggtaa-ttcctttggcagtactaatttcaaaa 19435481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 136 - 323
Target Start/End: Complemental strand, 19566320 - 19566128
Alignment:
Q  136 gaggtgtatatct-caagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtctacct 234  Q
    ||||||||||||| | ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  19566320 gaggtgtatatctacgagcgattgtatattgtgcagtatataatcgtaacagtgatctgggctgttttatcctagagacggcgtggttgttagtctacct 19566221  T
Q  235 tgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca-----gtaatttcttttggcagtactaatttcaaaa 323  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||     |||| ||| ||||||||||||||||||||||    
T  19566220 tgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacccggtaa-ttcctttggcagtactaatttcaaaa 19566128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 136 - 323
Target Start/End: Complemental strand, 19571822 - 19571630
Alignment:
Q  136 gaggtgtatatct-caagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtctacct 234  Q
    ||||||||||||| | ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  19571822 gaggtgtatatctacgagcgattgtatattgtgcagtatataatcgtaacagtgatctgggctgttttatcctagagacggcgtggttgttagtctacct 19571723  T
Q  235 tgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca-----gtaatttcttttggcagtactaatttcaaaa 323  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||     |||| ||| ||||||||||||||||||||||    
T  19571722 tgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacccggtaa-ttcctttggcagtactaatttcaaaa 19571630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 130 - 292
Target Start/End: Complemental strand, 31030691 - 31030528
Alignment:
Q  130 tatttagaggtgtatatct-caagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagt 228  Q
    ||||| ||||||||||||| | |||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  31030691 tatttcgaggtgtatatctacgagcgattgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcctggagacggcgtggttgttagt 31030592  T
Q  229 ctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||| || ||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  31030591 ctaccttgcataatttgggtagtgtcgcgaaacgtcttaaagagagcgacctggtcgtgactca 31030528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 19430762 - 19430635
Alignment:
Q  1 gtgagtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |    
T  19430762 gtgagtgtgtgacttaaaaatgtcccacattggtgagccacaccaactagaaagtgtttatataagggtagagtgacctccaagggtgtgcccttgggat 19430663  T
Q  101 acccacttttgtgaacgggtgaacgctt 128  Q
    ||||||||||||||||||||||||||||    
T  19430662 acccacttttgtgaacgggtgaacgctt 19430635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 19566911 - 19566784
Alignment:
Q  1 gtgagtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |    
T  19566911 gtgagtgtgtgacttaaaaatgtcccacattggtgagccacaccaactagaaagtgtttatataagggtagagtgacctccaagggtgtgcccttgggat 19566812  T
Q  101 acccacttttgtgaacgggtgaacgctt 128  Q
    ||||||||||||||||||||||||||||    
T  19566811 acccacttttgtgaacgggtgaacgctt 19566784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 19436204 - 19436077
Alignment:
Q  1 gtgagtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||    
T  19436204 gtgagtgtgtgacttaaaaatgtcccacattggtgagccacaccaactagaaagtgtttatataagggtaaagtgacctccaagggtgtgcccttggggt 19436105  T
Q  101 acccacttttgtgaacgggtgaacgctt 128  Q
    |||||||||||||||| |||||||||||    
T  19436104 acccacttttgtgaactggtgaacgctt 19436077  T

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Target: chr8; HSP #10
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 19572353 - 19572226
Alignment:
Q  1 gtgagtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||    
T  19572353 gtgagtgtgtgacttaaaaatgtcccacattggtgagccacaccaactagaaagtgtttatataagggtaaagtgacctccaagggtgtgcccttggggt 19572254  T
Q  101 acccacttttgtgaacgggtgaacgctt 128  Q
    |||||||||||||||| |||||||||||    
T  19572253 acccacttttgtgaactggtgaacgctt 19572226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 151 - 329
Target Start/End: Complemental strand, 13584499 - 13584310
Alignment:
Q  151 agcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaact------- 243  Q
    |||||||||||| |||||||| |||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||           
T  13584499 agcgattgtatactgtgcagtatataatcgtaacagtgatctgaactgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggaac 13584400  T
Q  244 -tgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca-----gtaatttcttttggcagtactaatttcaaaaacaaca 329  Q
     |||||||||| |||||||||||||||||||||||||||||||||| |||     ||||||   ||||||||||||||||||||||||||||    
T  13584399 ttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgattcaacctggtaatt--ctttggcagtactaatttcaaaaacaaca 13584310  T

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Target: chr8; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 13584899 - 13584772
Alignment:
Q  1 gtgagtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggt 100  Q
    ||||| |||||| ||||||||||| |||||||||||||||||||||||||||||  |||||||| |||||||||||| ||||||||||||||||||||||    
T  13584899 gtgagcgtgtgatttaaaaatgtcccacattggtgagccacaccaactagaaagtgtttatatacgggtagagtgacatccaagggtgtgcccttggggt 13584800  T
Q  101 acccacttttgtgaacgggtgaacgctt 128  Q
    ||||||||||||||||||||||||||||    
T  13584799 acccacttttgtgaacgggtgaacgctt 13584772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 31031285 - 31031171
Alignment:
Q  1 gtgagtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||| ||||||||||||||    
T  31031285 gtgagtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagtat--atataagggtagagtgacctccaaggatgtgcccttggggt 31031188  T
Q  101 acccacttttgtgaacg 117  Q
    |||||||||||||||||    
T  31031187 acccacttttgtgaacg 31031171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 33616128 - 33616254
Alignment:
Q  1 gtgagtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggt 100  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||| ||||    
T  33616128 gtgagtatgtggcttaaaaatgtctcacattggtgagccacaccaactagaaagtgtttatataagggtagagtaacctccaagggtgtgccctt-gggt 33616226  T
Q  101 acccacttttgtgaacgggtgaacgctt 128  Q
    |||||||||| ||||||| |||||||||    
T  33616227 acccacttttatgaacggatgaacgctt 33616254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 191 - 292
Target Start/End: Original strand, 42514368 - 42514469
Alignment:
Q  191 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgact 290  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||| |||||    
T  42514368 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcatgact 42514467  T
Q  291 ca 292  Q
    ||    
T  42514468 ca 42514469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 17955782 - 17955884
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||||| ||||||||||||||| | |||||||||||||||||    
T  17955782 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgac 17955881  T
Q  290 tca 292  Q
    |||    
T  17955882 tca 17955884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 288
Target Start/End: Original strand, 21644074 - 21644172
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtga 288  Q
    |||||||||||||||||||||| ||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||    
T  21644074 tctgggctgttttatcctggagtcggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 21644172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 32015802 - 32015700
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  ||||||||  ||||||||||||||||||||||||||||||||||    
T  32015802 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccacgaaacgtcttaaagagagcgacctggtcgtgac 32015703  T
Q  290 tca 292  Q
    |||    
T  32015702 tca 32015700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 24884815 - 24884712
Alignment:
Q  190 tctgggctgtttt-atcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtga 288  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||| || |||||||||||||| ||| ||||||||||||    
T  24884815 tctgggctgtttttatcctggagacggcgtggttgctagtctaccttgcacaacttaggtagtgccgcaaaacgtcttaaagaaagctacctggtcgtga 24884716  T
Q  289 ctca 292  Q
    ||||    
T  24884715 ctca 24884712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 43999223 - 43999325
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||||||| || |||||||| ||||||||| ||||||| | ||||||| |||||||    
T  43999223 tctgggctgttttatcctggagacggcgcagttgctagtctaccttgcacaatttaggtagtgccgcgaaacgttttaaagaaaacgacctgatcgtgac 43999322  T
Q  290 tca 292  Q
    |||    
T  43999323 tca 43999325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 31449866 - 31449962
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  31449866 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 31449962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 38182237 - 38182333
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| || ||| |||||||||| |||||| |||||  |||||||| ||||||||||||||||||||||||||||    
T  38182237 tgttttatcctggaggcggcgtggttgataatctgccttgcacaatcttgggaagtgccacgaaacgttttaaagagagcgacctggtcgtgactca 38182333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 44925923 - 44926019
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||| |||||  |||||||| ||||||||||||||||||||||||||||    
T  44925923 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgttttaaagagagcgacctggtcgtgactca 44926019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 15875668 - 15875764
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||||  ||||| |||||  ||||||||| ||||||||||||||||||||| |||||    
T  15875668 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcctaaagagagcgacctggtcgtaactca 15875764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 19166729 - 19166633
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| || ||||||| || ||| |||||  ||||||||||||||||||||||| |||||||||||||    
T  19166729 tgttttatcctggaggcggcgtggttgatagtctgccgtgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatggtcgtgactca 19166633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 40125885 - 40125981
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||| ||||| ||||||||||| |||||| |||||||||| || ||| |||||  |||||||||||||||||||||| ||||||||||||||    
T  40125885 tgttttatcttggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgatctggtcgtgactca 40125981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 17026030 - 17025934
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaac-ttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| || |||| ||| ||||||  |||||||||  ||||| |||||  |||||||||||||||||||||||||||||||||||||    
T  17026030 tgttttatcctggaggcgacgtgattgatagtctgtcttgcacaatgttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 17025934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 17556522 - 17556426
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaac-ttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| || |||| ||| ||||||  |||||||||  ||||| |||||  |||||||||||||||||||||||||||||||||||||    
T  17556522 tgttttatcctggaggcgacgtgattgatagtctgtcttgcacaatgttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 17556426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 18876367 - 18876462
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| ||||||  |||||||||  ||||| |||||  |||||||||||||| ||||||||||||||||||||||    
T  18876367 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaa-agagcgacctggtcgtgactca 18876462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 24090722 - 24090626
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||| ||||| || |||| ||| || ||| ||||||||||||| ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  24090722 tgttttatcttggaggcgacgtgattgatattctgccttgcacaactttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 24090626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 33416642 - 33416546
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||| ||||| ||||||||||| ||||||  ||||||||| || ||| |||||  |||||||||||||||||| ||||||||||||||||||    
T  33416642 tgttttatcttggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagaccgacctggtcgtgactca 33416546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 197 - 293
Target Start/End: Original strand, 43302718 - 43302816
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa--cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactcag 293  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||   ||||  |||||  |||||||||||||||||| ||||| |||||| ||||||    
T  43302718 tgttttatcctggaggcggcgtggttgatagtctaccttgcacaatttttggacagtgccacgaaacgtcttaaagagaacgaccgggtcgtaactcag 43302816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 199 - 292
Target Start/End: Complemental strand, 1807565 - 1807471
Alignment:
Q  199 ttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||| ||| ||||||||||| |||||| |||||||||| || ||| ||||   ||||||||||||||||||||||||| |||||||||||    
T  1807565 ttttatcctagaggcggcgtggttgatagtctgccttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacctagtcgtgactca 1807471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 34118561 - 34118465
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||  || || |||||||| |||||| |||||||||| || ||| |||||   ||||||||||||||||||||||||||||||||||||    
T  34118561 tgttttatcctaaaggcgacgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactca 34118465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 36683674 - 36683578
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| | ||||||||| |||||| |||| ||||| || ||| |||||  ||||||||||||||||||||||||| ||| |||||||    
T  36683674 tgttttatcctggaggcagcgtggttgatagtctgccttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctagtcatgactca 36683578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 197 - 290
Target Start/End: Original strand, 1910969 - 1911063
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggg-tagtgctgcgaaacgtcttaaagagagcgacctggtcgtgact 290  Q
    |||||||| |||||| | ||||||||| |||||| | |||||||| || |  ||||||  |||||||||||||||||||||||||| ||||||||    
T  1910969 tgttttatactggaggcagcgtggttgatagtctgctttgcacaattttgactagtgccacgaaacgtcttaaagagagcgacctgatcgtgact 1911063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 199 - 292
Target Start/End: Original strand, 28559656 - 28559750
Alignment:
Q  199 ttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||| |||||||||||||| |||| | ||||||||||  ||||  |||||  |||||||||||| |||||||||| | |||||||||||    
T  28559656 ttttatcctgcagacggcgtggttgatagtttgccttgcacaattttggacagtgccacgaaacgtcttatagagagcgacattgtcgtgactca 28559750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 292
Target Start/End: Original strand, 40130733 - 40130782
Alignment:
Q  243 ttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||| |||||  |||||||||||||||||||||||||||||||||||||    
T  40130733 ttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 40130782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 2965725 - 2965629
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-ggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||| ||| ||| ||||||| |||| |  ||||||||| ||  || |||||  |||||||| ||||||||||||||||||||||||||||    
T  2965725 tgttttatcctagaggcggtgtggttgatagtgtgtcttgcacaattttaggcagtgccacgaaacgttttaaagagagcgacctggtcgtgactca 2965629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 17953873 - 17953969
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||| ||||| ||||||||||| || |||  ||||||||| || ||| |||||  |||||||||||||||| |||||| ||||||| |||||    
T  17953873 tgttttatcttggaggcggcgtggttgatattctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagaaagcgacatggtcgttactca 17953969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 21641298 - 21641337
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  21641298 tccaagggtgtgcccttggggtatccacttttgtgaacgg 21641337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 118
Target Start/End: Complemental strand, 24885299 - 24885260
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  24885299 tccaagggtgtacccttggggtacccacttttgtgaacgg 24885260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 42514020 - 42514059
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  42514020 tccaagggtgtgtccttggggtacccacttttgtgaacgg 42514059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 292
Target Start/End: Original strand, 4238337 - 4238411
Alignment:
Q  219 ggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||| |||||| |||||||||| || ||| |||||   ||||||| ||||||||||||||||||||||||||||    
T  4238337 ggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtgttaaagagagcgacctggtcgtgactca 4238411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 292
Target Start/End: Original strand, 4243076 - 4243150
Alignment:
Q  219 ggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||| |||||| |||||||||| || ||| |||||   ||||||| ||||||||||||||||||||||||||||    
T  4243076 ggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtgttaaagagagcgacctggtcgtgactca 4243150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 32010584 - 32010538
Alignment:
Q  246 ggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||| |||||| |||||||| ||||||||||||||||||||||    
T  32010584 ggtagtgccgcgaaatgtcttaaaaagagcgacctggtcgtgactca 32010538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 292
Target Start/End: Complemental strand, 37771785 - 37771711
Alignment:
Q  219 ggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||||| ||||| || ||||||||| | ||   |||||||||| ||||||||||||||||||||    
T  37771785 ggttgttagtctacctttcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactca 37771711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 259 - 292
Target Start/End: Original strand, 15951584 - 15951617
Alignment:
Q  259 aacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||||||||||||||||||||||    
T  15951584 aacgtcttaaagagagcgacctggtcgtgactca 15951617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 292
Target Start/End: Original strand, 34818722 - 34818794
Alignment:
Q  221 ttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||||||||| || ||||||||  | ||   |||||||||| ||||||||||||||||||||    
T  34818722 ttgttagtctaccttgcacaatttcgggtagtgtcgtgatttgtcttaaagaaagcgacctggtcgtgactca 34818794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 17955306 - 17955343
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaac 116  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  17955306 tccacgggtgtgcccttggggtacacacttttgtgaac 17955343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 23548692 - 23548728
Alignment:
Q  256 cgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  23548692 cgaaacgtcttatagagagcgaccaggtcgtgactca 23548728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 29220359 - 29220315
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa 241  Q
    ||||||||||| ||| | ||||||||| |||||||||||||||||    
T  29220359 tgttttatccttgaggcagcgtggttgatagtctaccttgcacaa 29220315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 139; Significance: 1e-72; HSPs: 64)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 130 - 292
Target Start/End: Complemental strand, 19478310 - 19478148
Alignment:
Q  130 tatttagaggtgtatatctcaagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtc 229  Q
    ||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  19478310 tattttgaggtgtatatctcgagcgattgtatactgtgcagtgtataatcgtaacagtgatctgggctgttttatcgtggagacggcgtggttgttagtc 19478211  T
Q  230 taccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19478210 taccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 19478148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 130 - 292
Target Start/End: Original strand, 13605025 - 13605187
Alignment:
Q  130 tatttagaggtgtatatctcaagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtc 229  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  13605025 tatttagaggtgtatatctcgagtgattgtatattgtgcagtgtataatcgtaacagtgatttgggctgttttatcctggagacggcgtggttgttagtc 13605124  T
Q  230 taccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||    
T  13605125 taccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcaacctagtcgtgactca 13605187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 19478867 - 19478740
Alignment:
Q  1 gtgagtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||    
T  19478867 gtgagtgtgtgacttaaaaatgtcccacattggtgagccacaccaactagaaagtgtttatataagggtagagtaacctccaagggtgtgcccttggggt 19478768  T
Q  101 acccacttttgtgaacgggtgaacgctt 128  Q
    ||||||||||||||||||||||||||||    
T  19478767 acccacttttgtgaacgggtgaacgctt 19478740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 130 - 292
Target Start/End: Original strand, 31495774 - 31495936
Alignment:
Q  130 tatttagaggtgtatatctcaagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtc 229  Q
    ||||| |||||||||||||| ||||||| |||| |||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  31495774 tattttgaggtgtatatctcgagcgattatatactgtgcagtatgtaatcgtaacagtgatctgggctgttttatcctggagacggcgtggttgttagtt 31495873  T
Q  230 taccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||| ||||| || ||  ||||||| || |||| | |||||| |||| ||||| ||||||||||    
T  31495874 tactttgcataatttaagtagtgccgccaaacatgttaaagtgagcaacctgatcgtgactca 31495936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 130 - 292
Target Start/End: Original strand, 31501160 - 31501322
Alignment:
Q  130 tatttagaggtgtatatctcaagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtc 229  Q
    ||||| |||||||||||||| ||||||| |||| |||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  31501160 tattttgaggtgtatatctcgagcgattatatactgtgcagtatgtaatcgtaacagtgatctgggctgttttatcctggagacggcgtggttgttagtt 31501259  T
Q  230 taccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||| ||||| || ||  ||||||| || |||| | |||||| |||| ||||| ||||||||||    
T  31501260 tactttgcataatttaagtagtgccgccaaacatgttaaagtgagcaacctgatcgtgactca 31501322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 17280925 - 17281048
Alignment:
Q  5 gtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggtaccc 104  Q
    ||||||||||||||||||| |||||||||||||||| | ||||||| |||  ||||||||||||||||||||||||||||||||||||||| | ||||||    
T  17280925 gtgtgtgacttaaaaatgtttcacattggtgagccatatcaactagcaagtgtttatataagggtagagtgacctccaagggtgtgcccttcgcgtaccc 17281024  T
Q  105 acttttgtgaacgggtgaacgctt 128  Q
    |||||||  ||||||||| |||||    
T  17281025 acttttgcaaacgggtgagcgctt 17281048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 21396801 - 21396699
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    ||||||||||||||||||||||| |||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  21396801 tctgggctgttttatcctggagatggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 21396702  T
Q  290 tca 292  Q
    |||    
T  21396701 tca 21396699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 22698236 - 22698338
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  |||||||| |||||||||||||||||||||||||||||||||||    
T  22698236 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 22698335  T
Q  290 tca 292  Q
    |||    
T  22698336 tca 22698338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 24192473 - 24192575
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||  |||||||| ||||||||||||||||| |||||||||||||||||    
T  24192473 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaactcaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 24192572  T
Q  290 tca 292  Q
    |||    
T  24192573 tca 24192575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 29491230 - 29491332
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||| ||||||||||    
T  29491230 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacttggtcgtgac 29491329  T
Q  290 tca 292  Q
    |||    
T  29491330 tca 29491332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 130 - 292
Target Start/End: Original strand, 31515664 - 31515826
Alignment:
Q  130 tatttagaggtgtatatctcaagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtc 229  Q
    ||||| |||||||||||||| ||||||| |||| |||||||| | |||||||||||||| ||| |||||||||||||||||||||||||||||||||||     
T  31515664 tattttgaggtgtatatctcgagcgattatatactgtgcagtatgtaatcgtaacagtgatctaggctgttttatcctggagacggcgtggttgttagtt 31515763  T
Q  230 taccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||| ||||| || ||  ||||||| || |||| | |||||| |||| ||||| ||||||||||    
T  31515764 tactttgcataatttaagtagtgccgccaaacatgttaaagtgagcaacctgatcgtgactca 31515826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 34142182 - 34142080
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||  |||||||||||||||| |||||||||||||||||    
T  34142182 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttgggtagagccacgaaacgtcttaaagaaagcgacctggtcgtgac 34142083  T
Q  290 tca 292  Q
    |||    
T  34142082 tca 34142080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 34154798 - 34154696
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||  |||||||||||||||| |||||||||||||||||    
T  34154798 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttgggtagagccacgaaacgtcttaaagaaagcgacctggtcgtgac 34154699  T
Q  290 tca 292  Q
    |||    
T  34154698 tca 34154696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 17289672 - 17289795
Alignment:
Q  5 gtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggtaccc 104  Q
    |||||||||||||||||||| |||||||||||||||||||||| || |||  ||||||||||||||||||||| ||||||| |||||||||||  |||||    
T  17289672 gtgtgtgacttaaaaatgtcccacattggtgagccacaccaacaagcaagtgtttatataagggtagagtgacatccaaggatgtgcccttggactaccc 17289771  T
Q  105 acttttgtgaacgggtgaacgctt 128  Q
    ||||||| |||| ||||| |||||    
T  17289772 acttttgcgaacaggtgagcgctt 17289795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 24191376 - 24191478
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||  |||||||||||||||||||  |||||||| ||||||||||||||||| |||||||||||||||||    
T  24191376 tctgggctgttttatcctggagacggcgcggttactagtctaccttgcacaactcaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 24191475  T
Q  290 tca 292  Q
    |||    
T  24191476 tca 24191478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 31981662 - 31981560
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    ||||| |||||||||||||||||||||| ||||| ||||||||||||||||| || |||||||| ||||||||||||||||| |||||||||||||||||    
T  31981662 tctggcctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 31981563  T
Q  290 tca 292  Q
    |||    
T  31981562 tca 31981560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 5 - 128
Target Start/End: Complemental strand, 10485824 - 10485701
Alignment:
Q  5 gtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggtaccc 104  Q
    ||||| |||||||||||||  ||||||||||||||||||||||||| |||  ||||||||||||||||||||| |||||||||||||||||| ||||||     
T  10485824 gtgtgagacttaaaaatgttccacattggtgagccacaccaactagcaagtgtttatataagggtagagtgacatccaagggtgtgcccttgaggtacct 10485725  T
Q  105 acttttgtgaacgggtgaacgctt 128  Q
    ||||||| |||  ||||| |||||    
T  10485724 acttttgcgaataggtgagcgctt 10485701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 34376021 - 34375919
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| || ||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||| |||||||    
T  34376021 tctgggctgttttatcctggagacggcgcggttgctaatctacgttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctgatcgtgac 34375922  T
Q  290 tca 292  Q
    |||    
T  34375921 tca 34375919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 195 - 292
Target Start/End: Original strand, 12182998 - 12183096
Alignment:
Q  195 gctgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||| |||||| || || |||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12182998 gctgttttattctggaggcgacgcggttgttagtctacattgcacaaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 12183096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 22703359 - 22703461
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| | |||| |  |||||||    
T  22703359 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaaacgacataatcgtgac 22703458  T
Q  290 tca 292  Q
    |||    
T  22703459 tca 22703461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 203 - 292
Target Start/End: Complemental strand, 21401844 - 21401755
Alignment:
Q  203 atcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||| ||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||    
T  21401844 atcctggagacggcgcggttgctagtctaccttccacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 21401755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 175 - 292
Target Start/End: Original strand, 31475993 - 31476110
Alignment:
Q  175 taatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagag 274  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||  |||||||| |||||   |||||| || |||| |||||||| |||    
T  31475993 taatcgtaacagtgatctgagctgttttatcctggagacggcgtggttgttagttgaccttgcataacttaaatagtgccgccaaacatcttaaagtgag 31476092  T
Q  275 cgacctggtcgtgactca 292  Q
    | ||||| ||||||||||    
T  31476093 caacctgatcgtgactca 31476110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 182 - 292
Target Start/End: Complemental strand, 3902023 - 3901912
Alignment:
Q  182 aacagtggtctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacct 280  Q
    ||||||| ||| | || ||||||||||||| ||||| ||||| || |||||||||||||| ||||| |||||| || |||||||||||||||||||||||    
T  3902023 aacagtgatctagactattttatcctggaggcggcgcggttggtattctaccttgcacaaacttggatagtgccgcaaaacgtcttaaagagagcgacct 3901924  T
Q  281 ggtcgtgactca 292  Q
    ||||||||||||    
T  3901923 ggtcgtgactca 3901912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 190 - 288
Target Start/End: Original strand, 2818140 - 2818238
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtga 288  Q
    |||| ||||||||||||||||||||||| ||||  |||||||||||||||||||| ||||||   || |||||||||||||| ||||||||||||||||    
T  2818140 tctgagctgttttatcctggagacggcgcggtttctagtctaccttgcacaacttaggtagtaacgcaaaacgtcttaaagaaagcgacctggtcgtga 2818238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 29326317 - 29326228
Alignment:
Q  9 gtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggg 98  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||  ||||||||||||| | ||||||||||||||| || |||||||    
T  29326317 gtgacttaaaaatgtctcacattggtgaggcacaccaactagcaagtgtttatataagggtggggtgacctccaagggtatgtccttggg 29326228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 3902947 - 3902847
Alignment:
Q  5 gtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggtaccc 104  Q
    ||||| ||||||||||||||  ||||||||||  |||||||||||| |||  ||||||||||||| | |||||||||||||||||||||||| |||||||    
T  3902947 gtgtgagacttaaaaatgtcctacattggtgaatcacaccaactagcaagtgtttatataagggtggggtgacctccaagggtgtgcccttgaggtaccc 3902848  T
Q  105 a 105  Q
    |    
T  3902847 a 3902847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 130 - 292
Target Start/End: Original strand, 17281495 - 17281659
Alignment:
Q  130 tatttagaggtgtatat-ctcaagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagt 228  Q
    ||||| ||||||||||| ||| |||||||  ||||||||||||  ||| | ||||||||| | ||||||||||||||||  || ||  | ||||||||||    
T  17281495 tattttgaggtgtatattctcgagcgattacatattgtgcagtacatagttgtaacagtgatttgggctgttttatcctaaaggcgatgcggttgttagt 17281594  T
Q  229 ctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||| ||||| |  ||||||||| ||||||||||||||||| |||||| || ||||||||||    
T  17281595 ctaccttacacaaatacgggtagtgccgcgaaacgtcttaaagaaagcgacatgctcgtgactca 17281659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 196 - 292
Target Start/End: Original strand, 5600971 - 5601068
Alignment:
Q  196 ctgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||| ||||| ||||| |||||||| |||||||| ||||| || ||||||||  ||||||||||||||||| ||||||||||||||||||||    
T  5600971 ctgttttatcttggaggcggcgcggttgttattctaccttacacaaactcgggtagtgtcgcgaaacgtcttaaagaaagcgacctggtcgtgactca 5601068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 11570749 - 11570845
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| | |||| |||||||||| || ||| |||||  |||||||||||||||||||||||||||| ||||||||    
T  11570749 tgttttatcctggaggcggcgtggttgattgtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggttgtgactca 11570845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 191 - 292
Target Start/End: Complemental strand, 10642811 - 10642709
Alignment:
Q  191 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    ||||| |||||||||| |||| ||||| ||||||||||||||||||||||| || || ||||||  |||||||||||||||| |||||| | ||||||||    
T  10642811 ctgggatgttttatccgggaggcggcgcggttgttagtctaccttgcacaacctcggatagtgccacgaaacgtcttaaagaaagcgacattgtcgtgac 10642712  T
Q  290 tca 292  Q
    |||    
T  10642711 tca 10642709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 13660521 - 13660408
Alignment:
Q  5 gtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggtaccc 104  Q
    ||||||||||||||||| ||| | ||||||||||||||| |||||| |||  ||||||||||||| |  |||||||||| |||||||||||||| || ||    
T  13660521 gtgtgtgacttaaaaatatcttatattggtgagccacactaactagcaagtgtttatataagggtgggatgacctccaaaggtgtgcccttgggatatcc 13660422  T
Q  105 acttttgtgaacggg 119  Q
     |||||| |||||||    
T  13660421 -cttttgagaacggg 13660408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 128
Target Start/End: Original strand, 28696922 - 28697027
Alignment:
Q  26 cacattggtgagccacaccaactagaaagcat---ttatataagggtagagtgacctccaagggtgtgcccttggggtacccacttttgtgaacgggtga 122  Q
    ||||||||||||| ||||||||||| |||  |   |||||||||||| | |||||||| |||||||||| |||||||||||||||||||| |||| ||||    
T  28696922 cacattggtgagcaacaccaactagcaagtgtttattatataagggtggggtgacctctaagggtgtgcacttggggtacccacttttgtaaacgagtga 28697021  T
Q  123 acgctt 128  Q
     |||||    
T  28697022 gcgctt 28697027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 6407860 - 6407956
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| | ||| |||| || ||| |||||  ||||||||||| |||||||||||||| ||||||||||    
T  6407860 tgttttatcctggaggcggcgtggttgatagtctgctttgtacaattttgggcagtgccacgaaacgtcttcaagagagcgacctgatcgtgactca 6407956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 12689066 - 12688970
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||  ||||| |||    | ||||||||||||||||| ||||||||| |||||||    
T  12689066 tgttttatcctggagacggcgtggttgatagtctgccttgcacaattttgggcagtatcacaaaacgtcttaaagagagtgacctggtcatgactca 12688970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 24589164 - 24589260
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||  ||||  ||||   |||||||| ||||||||||||| ||| ||||||||||    
T  24589164 tgttttatcctggagacggcgtggttgatagtctatcttgcacaattttggaaagtgtcacgaaacgttttaaagagagcgatctgatcgtgactca 24589260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 33687603 - 33687699
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||||||||||| |||||| ||||||  |||||||||  ||||  |||||  |||||||||||||||||||||||||||| || |||||    
T  33687603 tgttttatcctggagacggcatggttgatagtctgtcttgcacaattttggccagtgccacgaaacgtcttaaagagagcgacctggtggtaactca 33687699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 11956127 - 11956212
Alignment:
Q  5 gtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtg 90  Q
    |||| ||||||||||||||  ||||| |||||||||||| ||||||||||  ||||||||||||| | ||||||| ||||| ||||    
T  11956127 gtgtatgacttaaaaatgttccacataggtgagccacactaactagaaagtgtttatataagggtggggtgacctacaaggatgtg 11956212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 2700106 - 2700202
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||  ||||||||||| ||||||  ||||||||| || |   |||||  |||||||||||||||||||||| ||||||||||||||    
T  2700106 tgttttatcctggaagcggcgtggttgatagtctgtcttgcacaattttgaacagtgccacgaaacgtcttaaagagagcgatctggtcgtgactca 2700202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 8747877 - 8747781
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| |||||| |||| ||| ||  ||||||||| || ||| ||||   || ||||||||||||||||||||||||||||||||||    
T  8747877 tgttttatcctggaggcggcgttgttgatagcctgtcttgcacaattttgggcagtgtcacggaacgtcttaaagagagcgacctggtcgtgactca 8747781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 12406353 - 12406449
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-ggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||| || || ||||||| ||| |||||| |||||||||||||  || | |||  ||||||||||| |||||||||||||||||||||||||    
T  12406353 tgttttatcatgaaggcggcgtgattgatagtcttccttgcacaactttaggcactgccacgaaacgtctttaagagagcgacctggtcgtgactca 12406449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 21309126 - 21309030
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| | ||||||||  ||||| |||||   |||||||||||||||||||||  |||| ||||||||    
T  21309126 tgttttatcctggaggcggcgtggttgatagtctgcattgcacaattttgggcagtgccatgaaacgtcttaaagagagcgatatggtagtgactca 21309030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 11428104 - 11428042
Alignment:
Q  232 ccttgcacaactt--gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||||  ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  11428104 ccttgcacaacttttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 11428042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 17964559 - 17964634
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaaga 271  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||||  |||| ||||||  ||||||||||||||||    
T  17964559 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggatagtgccacgaaacgtcttaaaga 17964634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 281
Target Start/End: Complemental strand, 22713788 - 22713705
Alignment:
Q  199 ttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctg 281  Q
    |||||||||| ||  |||| ||||||||||||| ||||||||| || | |||||||||| ||||||||||||||||| ||||||    
T  22713788 ttttatcctgaaggtggcgcggttgttagtctatcttgcacaaactcgagtagtgctgcaaaacgtcttaaagagagtgacctg 22713705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 182 - 292
Target Start/End: Complemental strand, 29325646 - 29325535
Alignment:
Q  182 aacagtggtctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacct 280  Q
    ||||||| |||||||| ||||||| ||||| || |   |||||||||||||||||||||| ||| |||||||  |  |||||||||||| |||||||| |    
T  29325646 aacagtgatctgggctattttatcttggaggcgtcacagttgttagtctaccttgcacaaacttaggtagtgtcgtaaaacgtcttaaaaagagcgactt 29325547  T
Q  281 ggtcgtgactca 292  Q
    | ||||||||||    
T  29325546 gatcgtgactca 29325535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 118
Target Start/End: Complemental strand, 34142756 - 34142717
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34142756 tccaagggtgtgcccttggggtacccacttttgtgaacgg 34142717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 118
Target Start/End: Complemental strand, 34155372 - 34155333
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34155372 tccaagggtgtgcccttggggtacccacttttgtgaacgg 34155333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 118
Target Start/End: Complemental strand, 34376439 - 34376400
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34376439 tccaagggtgtgcccttggggtacccacttttgtgaacgg 34376400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 2817573 - 2817612
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  2817573 tccaagggtgtgcccttggggtacacacttttgtgaacgg 2817612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 16836156 - 16836231
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaaga 271  Q
    ||||||||||||||| ||||||||||| |||||| ||||| ||||  ||||| |||||  ||||||||||||||||    
T  16836156 tgttttatcctggaggcggcgtggttgatagtctgccttgtacaattttgggcagtgccacgaaacgtcttaaaga 16836231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 128
Target Start/End: Complemental strand, 22714009 - 22713938
Alignment:
Q  57 tttatataagggtagagtgacctccaagggtgtgcccttggggtacccacttttgtgaacgggtgaacgctt 128  Q
    |||||||||| | ||||||||||| ||||||||| |||||||||||||| ||||   ||||||||| |||||    
T  22714009 tttatataagtggagagtgacctctaagggtgtgtccttggggtacccagttttacaaacgggtgagcgctt 22713938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 118
Target Start/End: Complemental strand, 31982154 - 31982115
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  31982154 tccaagggcgtgcccttggggtacccacttttgtgaacgg 31982115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 292
Target Start/End: Original strand, 5740792 - 5740886
Alignment:
Q  199 ttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||| | | ||||| ||||| ||||| ||||||||||| |||| ||||||  | |||||||||||||||||| ||||| ||| |||||||    
T  5740792 ttttatcctagtggcggcgcggttgatagtccaccttgcacaaacttgagtagtgtcgtgaaacgtcttaaagagagtgacctagtcatgactca 5740886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14450660 - 14450701
Alignment:
Q  1 gtgagtgtgtgacttaaaaatgtctcacattggtgagccaca 42  Q
    |||||||||||||||||||||||| ||||||| |||||||||    
T  14450660 gtgagtgtgtgacttaaaaatgtcccacattgatgagccaca 14450701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 118
Target Start/End: Original strand, 6727956 - 6727988
Alignment:
Q  86 gtgtgcccttggggtacccacttttgtgaacgg 118  Q
    |||||||||||||||||||||||||||||||||    
T  6727956 gtgtgcccttggggtacccacttttgtgaacgg 6727988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 11534738 - 11534774
Alignment:
Q  256 cgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||||||||||||||||| |||||||    
T  11534738 cgaaacgtcttaaagagagcgacctggtcttgactca 11534774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 11560248 - 11560284
Alignment:
Q  256 cgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||||||||||||||||| |||||||    
T  11560248 cgaaacgtcttaaagagagcgacctggtcttgactca 11560284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 11614092 - 11614136
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa 241  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||||    
T  11614092 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaa 11614136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 13736678 - 13736774
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| | | ||||||| |||||| ||||||||||  || || |||||  ||||||||| ||||||||| |||||||| | ||||||    
T  13736678 tgttttatcctggaggcagtgtggttggtagtcttccttgcacaattttaggcagtgccacgaaacgtcgtaaagagagggacctggtggcgactca 13736774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 257 - 292
Target Start/End: Original strand, 11956762 - 11956797
Alignment:
Q  257 gaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||||||||||||||||||| |||||||    
T  11956762 gaaacgtcttaaagagagcgacctggtcatgactca 11956797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 257 - 292
Target Start/End: Complemental strand, 19674347 - 19674312
Alignment:
Q  257 gaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||||||||| |||||||||||||||||    
T  19674347 gaaacgtcttaaagagagtgacctggtcgtgactca 19674312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 24190827 - 24190866
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||||||||| ||||||||||||||||||||| ||||||    
T  24190827 tccaagggtgtccccttggggtacccacttttgggaacgg 24190866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 292
Target Start/End: Original strand, 6728397 - 6728430
Alignment:
Q  259 aacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||| ||||||||||||||||||||    
T  6728397 aacgtcttaaagaaagcgacctggtcgtgactca 6728430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 29892261 - 29892357
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||||||  || ||||||| |||| |  ||||||||| || ||| |||||  | |||| |||||||||||||||||||  |||||||||    
T  29892261 tgttttatcctggaggaggtgtggttgatagtttgtcttgcacaattttgggcagtgccaccaaacttcttaaagagagcgacctgaccgtgactca 29892357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 139; Significance: 1e-72; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 130 - 292
Target Start/End: Original strand, 10120742 - 10120904
Alignment:
Q  130 tatttagaggtgtatatctcaagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtc 229  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  10120742 tatttagaggtgtatatctcgagcgattgtatactgtgcagtgtataatcgtaacagtgatctgggctattttatcctggagacggcgtggttgttagtc 10120841  T
Q  230 taccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  10120842 taccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctgatcgtgactca 10120904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 136 - 292
Target Start/End: Complemental strand, 653200 - 653043
Alignment:
Q  136 gaggtgtatatct-caagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtctacct 234  Q
    ||||||||||||| | |||| ||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  653200 gaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcctggagacggcgtggttgttagtctacct 653101  T
Q  235 tgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  653100 tgcacaaattgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 653043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 10119870 - 10119997
Alignment:
Q  1 gtgagtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||    
T  10119870 gtgagtgtgtgacttaaaaatgtcccacattggtgagccacaccaactagaaagtgtttatataagggtagagtgacctccaagggtgtacccttggggt 10119969  T
Q  101 acccacttttgtgaacgggtgaacgctt 128  Q
    ||||||||||||||||||||||||||||    
T  10119970 acccacttttgtgaacgggtgaacgctt 10119997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 653710 - 653592
Alignment:
Q  8 tgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggtacccact 107  Q
    ||||||||||||||||| ||||||||| || ||| |||||||| |||  |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  653710 tgtgacttaaaaatgtcccacattggttagtcaccccaactagtaagtgtttatataagggaagagtgacctccaagggtgtgcccttggggtacccact 653611  T
Q  108 tttgtgaacgggtgaacgc 126  Q
    |||||||||||||||||||    
T  653610 tttgtgaacgggtgaacgc 653592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 130 - 290
Target Start/End: Original strand, 8082959 - 8083121
Alignment:
Q  130 tatttagaggtgtatat-ctcaagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagt 228  Q
    ||||| ||||||||||| ||| |||||||  ||||||||||||   |||||||||||||| |||||||||||||||| ||||| ||||| ||||||||||    
T  8082959 tattttgaggtgtatattctcgagcgattacatattgtgcagtacgtaatcgtaacagtgatctgggctgttttatcttggaggcggcgcggttgttagt 8083058  T
Q  229 ctaccttgcac-aacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgact 290  Q
    ||||||||||| ||||||| |||||| | ||||||||||||||||||||||||| ||||||||    
T  8083059 ctaccttgcactaacttggatagtgccgtgaaacgtcttaaagagagcgacctgatcgtgact 8083121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 8980278 - 8980380
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  8980278 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 8980377  T
Q  290 tca 292  Q
    |||    
T  8980378 tca 8980380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 8985398 - 8985500
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  8985398 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 8985497  T
Q  290 tca 292  Q
    |||    
T  8985498 tca 8985500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 13700612 - 13700510
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  13700612 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 13700513  T
Q  290 tca 292  Q
    |||    
T  13700512 tca 13700510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 21299826 - 21299928
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  21299826 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 21299925  T
Q  290 tca 292  Q
    |||    
T  21299926 tca 21299928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 54991588 - 54991486
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  54991588 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 54991489  T
Q  290 tca 292  Q
    |||    
T  54991488 tca 54991486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 329 - 418
Target Start/End: Complemental strand, 31048469 - 31048380
Alignment:
Q  329 aataatacttgaaaagcatgaaagacggggtaaataatacacgagaaacctaaagaagtggaataaaaatacttgaaaattccaaagaga 418  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  31048469 aataatacttgaaaagcatgaaagacggggtaaataatacatgagaaacctaaagaggtggaataaaaatacttgaaaattccaaagaga 31048380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 21304946 - 21305048
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| |||||| |||||||||| |||||||||||||||||    
T  21304946 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaaagtcttaaagaaagcgacctggtcgtgac 21305045  T
Q  290 tca 292  Q
    |||    
T  21305046 tca 21305048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 36354278 - 36354176
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  |||||||| |||||||||||||||||||||||||||||||||||    
T  36354278 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 36354179  T
Q  290 tca 292  Q
    |||    
T  36354178 tca 36354176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 36359396 - 36359294
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  |||||||| |||||||||||||||||||||||||||||||||||    
T  36359396 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 36359297  T
Q  290 tca 292  Q
    |||    
T  36359296 tca 36359294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 39999171 - 39999069
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  |||||||| |||||||||||||||||||||||||||||||||||    
T  39999171 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 39999072  T
Q  290 tca 292  Q
    |||    
T  39999071 tca 39999069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 40004129 - 40004027
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  |||||||| |||||||||||||||||||||||||||||||||||    
T  40004129 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 40004030  T
Q  290 tca 292  Q
    |||    
T  40004029 tca 40004027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 41393347 - 41393245
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||| ||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  41393347 tctgtgctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 41393248  T
Q  290 tca 292  Q
    |||    
T  41393247 tca 41393245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 51019366 - 51019468
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  51019366 tctgggatgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 51019465  T
Q  290 tca 292  Q
    |||    
T  51019466 tca 51019468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 53797731 - 53797629
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||||| ||||||||||||||||| |||||||||||||||||    
T  53797731 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 53797632  T
Q  290 tca 292  Q
    |||    
T  53797631 tca 53797629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 54343305 - 54343203
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||    
T  54343305 tctgggctgttttatcctgtagacggcgcggttgctagtctaccttgcacaattcgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 54343206  T
Q  290 tca 292  Q
    |||    
T  54343205 tca 54343203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 54348459 - 54348357
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  |||||||| |||||||||||||||||||||||||||||||||||    
T  54348459 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 54348360  T
Q  290 tca 292  Q
    |||    
T  54348359 tca 54348357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 292
Target Start/End: Complemental strand, 13695257 - 13695159
Alignment:
Q  194 ggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  13695257 ggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacatcttaaagaaagcgacctggtcgtgactca 13695159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 13710770 - 13710669
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| ||||| |||||||||||    
T  13710770 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcga-ctggtcgtgac 13710672  T
Q  290 tca 292  Q
    |||    
T  13710671 tca 13710669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 47046300 - 47046402
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||| ||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| | |||||||||||||||    
T  47046300 tctgagctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtcgtgac 47046399  T
Q  290 tca 292  Q
    |||    
T  47046400 tca 47046402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 24490819 - 24490702
Alignment:
Q  5 gtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggtaccc 104  Q
    |||||| ||||||||||||| || ||||| |||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||| ||||||     
T  24490819 gtgtgtaacttaaaaatgtcccatattggagagccacaccaactagcaagtgtttatataagggtagagtgacctccaagggtgtgcccttgaggtacct 24490720  T
Q  105 acttttgtgaacgggtga 122  Q
    || |||| ||||||||||    
T  24490719 acatttgcgaacgggtga 24490702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 130 - 292
Target Start/End: Complemental strand, 24490195 - 24490031
Alignment:
Q  130 tatttagaggtgtatat-ctcaagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagt 228  Q
    ||||| ||||||||||| ||| ||| ||| ||||  |||||||   ||||||||| |||| | ||||||||||||||||||||  |||| ||||||||||    
T  24490195 tattttgaggtgtatattctcgagcaattatataacgtgcagtacgtaatcgtaatagtgatatgggctgttttatcctggaggtggcgcggttgttagt 24490096  T
Q  229 ctaccttgcac-aacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||| ||||||  |||||  ||||||||||||||||||||||| ||||||||||||||    
T  24490095 ctaccttgcacaaacttgattagtgtcgcgaaacgtcttaaagagagcgatctggtcgtgactca 24490031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 190 - 291
Target Start/End: Original strand, 9764014 - 9764115
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||| ||||||| | |||||||||||||||||||||||||| ||||||||  |||||| ||||||||   ||||||||||||||||    
T  9764014 tctgggctgttttatcctagagacggtgcggttgttagtctaccttgcacaacttaggtagtgccacgaaacatcttaaagtaggcgacctggtcgtgac 9764113  T
Q  290 tc 291  Q
    ||    
T  9764114 tc 9764115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 10318245 - 10318350
Alignment:
Q  4 agtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggtacc 103  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||  |||   |||||||||||| |  ||||||||||||||||| ||||||||||||    
T  10318245 agtgtgtgatttaaaaatgtctcacattgatgagccacaccaactaacaagtgattatataagggtgggatgacctccaagggtgtg-ccttggggtacc 10318343  T
Q  104 cactttt 110  Q
    |||||||    
T  10318344 cactttt 10318350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 5271419 - 5271515
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  5271419 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 5271515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 13521992 - 13522088
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  13521992 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 13522088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 31269129 - 31269033
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-ggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| ||  || |||||  |||||||||||||||||||||||||||||||||||||    
T  31269129 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 31269033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 31273616 - 31273520
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  31273616 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 31273520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 37259877 - 37259973
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgg-gtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || | |||||||  |||||||||||||||| ||||||||||||||||||||    
T  37259877 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacgtcttaaagaaagcgacctggtcgtgactca 37259973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 37264564 - 37264660
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| ||||||| || || ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  37264564 tgttttatcctggaggcggcgtggttgatagtctgccttgcataattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 37264660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 31765981 - 31765885
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||||  ||||| |||||  ||||||||||||||||||| |||||||| ||||||||    
T  31765981 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagtgacctggttgtgactca 31765885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 8693806 - 8693710
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||| ||| ||||||||||| |||| |  ||||||||| || |||||| ||  |||||||||||||||||||||||||||||||||||||    
T  8693806 tgttttatccttgaggcggcgtggttgatagtatgtcttgcacaattttgggtagcgccacgaaacgtcttaaagagagcgacctggtcgtgactca 8693710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 16421124 - 16421028
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||| || ||||||||||| |||||| |||||||||| || ||| |||||  ||||| ||||||| |||||||||||||||||||||||    
T  16421124 tgttttatcctgtaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaatgagagcgacctggtcgtgactca 16421028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 33463356 - 33463452
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||| |||||  | ||| ||||||||||||| ||  |||||  |||||||||||||||||||||||||||||||||||||    
T  33463356 tgttttatcctggaggcggcggggttgacaatctgccttgcacaactttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 33463452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 197 - 290
Target Start/End: Original strand, 31729387 - 31729481
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgact 290  Q
    ||||||||||||||| ||||||| ||| | |||| |||||||||| || |||||||||  |||||||||||||||||||||||||| || |||||    
T  31729387 tgttttatcctggaggcggcgtgattgattgtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagagcgacctgatcatgact 31729481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 5928219 - 5928315
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgg-gtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||| ||||||| |||||| |||||||||| || | | |||||  | |||| ||||||||||||||||||||||||||||||    
T  5928219 tgttttatcctggaggcggtgtggttgatagtctgccttgcacaattttgagcagtgccactaaacatcttaaagagagcgacctggtcgtgactca 5928315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 12823895 - 12823991
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||| |  ||||||||| || ||| |||||  ||||| ||||||||||||||||||||||| |||||||    
T  12823895 tgttttatcctggaggcggcgtggttgatagtttgtcttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcatgactca 12823991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 286
Target Start/End: Original strand, 30564412 - 30564504
Alignment:
Q  195 gctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgt 286  Q
    ||||||||||||| ||| ||||    ||||||||||||||||||||| || ||||||||| ||||||||||||| |||||||||||| |||||    
T  30564412 gctgttttatcctcgaggcggcacaattgttagtctaccttgcacaaatttgggtagtgccgcgaaacgtcttacagagagcgacctagtcgt 30564504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 198 - 292
Target Start/End: Original strand, 42758756 - 42758851
Alignment:
Q  198 gttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||| |||||| || |||||||| ||||||  ||||||||| || ||| |||||  |||||| ||||||||||||||||||||||||||||||    
T  42758756 gttttattctggaggcgacgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacctggtcgtgactca 42758851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 76 - 118
Target Start/End: Original strand, 9763442 - 9763484
Alignment:
Q  76 acctccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  9763442 acctccaagggtgtgcccttggggtacccacttttgtgaacgg 9763484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 195 - 292
Target Start/End: Complemental strand, 34644655 - 34644557
Alignment:
Q  195 gctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||||| || ||||| |||||||||| |||||| ||| |||| || |||||  ||||||||||||||||| |||||| || ||||||||||    
T  34644655 gctgttttatcctgtaggcggcgcggttgttagtttaccttacacaaactcggatagtgtcgcgaaacgtcttaaagaaagcgacatgatcgtgactca 34644557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 10318779 - 10318875
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||| |||||| ||| ||||| ||||||||||||||||||||||| ||||| ||     |||||| ||||||||||||||||| |||||||||||||    
T  10318779 tgttctatcctagaggcggcgcggttgttagtctaccttgcacaaacttggatacgatcgcgaaatgtcttaaagagagcgacatggtcgtgactca 10318875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 33468973 - 33469069
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||| |||||  ||||||||||  ||||| ||||||||||||| ||| |||||  | |||||||||||||||| |||||| |||||||||||    
T  33468973 tgttttatcatggaggtggcgtggttgacagtctgccttgcacaactttgggcagtgccacaaaacgtcttaaagagaacgacctagtcgtgactca 33469069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 51698012 - 51697916
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||||  ||| | ||||    ||||||||||||| ||||||| ||||||||||||||    
T  51698012 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagcagtgtcatgaaacgtcttaaaaagagcgatctggtcgtgactca 51697916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 55251814 - 55251719
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||||||  |||||||||| ||||||  |||||||||  ||||  |||||  |||||||||||||| ||||||||||||||||||||||    
T  55251814 tgttttatcctggaggtggcgtggttgatagtctgtcttgcacaattttggacagtgccacgaaacgtcttaaa-agagcgacctggtcgtgactca 55251719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 118
Target Start/End: Complemental strand, 13711345 - 13711306
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13711345 tccaagggtgtgcccttggggtacccacttttgtgaacgg 13711306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 118
Target Start/End: Complemental strand, 41393835 - 41393796
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  41393835 tccaagggtgtgcccttggggtacccacttttgtgaacgg 41393796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 219 - 292
Target Start/End: Complemental strand, 39319705 - 39319631
Alignment:
Q  219 ggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||||||||||| || | ||||||  | ||||||||||||||| ||||||||| ||||||||||    
T  39319705 ggttgttagtctaccttgcacaaactcgagtagtgtcgtgaaacgtcttaaagaaagcgacctgatcgtgactca 39319631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 281
Target Start/End: Original strand, 8030476 - 8030561
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctg 281  Q
    ||||||||||||||| | |||| |||| ||||||| |||||||||  ||||| |||||  | ||||||||||||||||||||||||    
T  8030476 tgttttatcctggaggcagcgttgttgatagtctatcttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctg 8030561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 122
Target Start/End: Complemental strand, 15451823 - 15451783
Alignment:
Q  82 aagggtgtgcccttggggtacccacttttgtgaacgggtga 122  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  15451823 aagggtgtgcccttggggtacccacttttgcgaacgggtga 15451783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 116
Target Start/End: Complemental strand, 4207015 - 4206980
Alignment:
Q  81 caagggtgtgcccttggggtacccacttttgtgaac 116  Q
    ||||||||||||||||||||||||||||||||||||    
T  4207015 caagggtgtgcccttggggtacccacttttgtgaac 4206980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 191 - 277
Target Start/End: Complemental strand, 17359633 - 17359546
Alignment:
Q  191 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgctgcgaaacgtcttaaagagagcga 277  Q
    ||||| ||||| |||||||||  ||||  ||||||||||||||||| || |||| ||||||||| | ||||||||||||||| |||||    
T  17359633 ctgggttgtttaatcctggaggtggcgcagttgttagtctaccttgaacaaactcgggtagtgccgggaaacgtcttaaagaaagcga 17359546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 129
Target Start/End: Complemental strand, 53798304 - 53798253
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg-gtgaacgcttg 129  Q
    |||||||||||||| ||||||||| ||||||||||||||| |||||||||||    
T  53798304 tccaagggtgtgcctttggggtacacacttttgtgaacggagtgaacgcttg 53798253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 292
Target Start/End: Original strand, 13065786 - 13065864
Alignment:
Q  215 gcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||| |||||| |||| |||||||| ||| |||||   |||||||||||||||||||||| | |||||||||||    
T  13065786 gcgtggttgatagtctccctttcacaactttgggcagtgccatgaaacgtcttaaagagagcgacatagtcgtgactca 13065864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 290
Target Start/End: Complemental strand, 19102072 - 19101978
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgg-gtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgact 290  Q
    ||||||||||||||| || |||||||| ||||||   |||||||| || | |||||||  |||||||||||||| |||| ||||| |||||||||    
T  19102072 tgttttatcctggaggcgacgtggttgatagtctgttttgcacaattttgagtagtgccacgaaacgtcttaaacagagtgacctcgtcgtgact 19101978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 110
Target Start/End: Original strand, 30563830 - 30563867
Alignment:
Q  73 gtgacctccaagggtgtgcccttggggtacccactttt 110  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  30563830 gtgacctccaagggtgtgcccttggggtatccactttt 30563867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 31099352 - 31099280
Alignment:
Q  220 gttgttagtctaccttgcacaactt-gggtagtg--ctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||| |||||||||||||||||||| ||| ||||  ||| |||||||||| ||||||||||| ||||||||||    
T  31099352 gttgatagtctaccttgcacaactttgggcagtgtgctgtgaaacgtcttgaagagagcgacttggtcgtgac 31099280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 12878274 - 12878238
Alignment:
Q  256 cgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||||||||||||||||| ||||||||||    
T  12878274 cgaaacgtcttaaagagagcgacctgatcgtgactca 12878238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 19106714 - 19106618
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||| |||||| || |||||||| |||||  |||||||||| || ||| ||||||  ||||||||||||||| ||||| ||| | ||||||||    
T  19106714 tgttttattctggaggcgacgtggttgatagtcagccttgcacaattttgggcagtgctatgaaacgtcttaaagaaagcgatctgcttgtgactca 19106618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 292
Target Start/End: Complemental strand, 51697069 - 51697001
Alignment:
Q  225 tagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||| |||||||||| || ||| |||||   |||||||||||| |||||||||||||||||||||||    
T  51697069 tagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaggagagcgacctggtcgtgactca 51697001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 73 - 115
Target Start/End: Original strand, 17682359 - 17682402
Alignment:
Q  73 gtgacctccaaggg-tgtgcccttggggtacccacttttgtgaa 115  Q
    |||||||||||||| | |||||||||||||||||||||||||||    
T  17682359 gtgacctccaagggatttgcccttggggtacccacttttgtgaa 17682402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 34560568 - 34560497
Alignment:
Q  222 tgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||||| || || ||||||||| | ||   |||||||||| ||||||||||||||||||||    
T  34560568 tgttagtctaccttgcataatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactca 34560497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 47045792 - 47045830
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  47045792 tccaagggtgtgcccttggg-tacccacttttgtgaacgg 47045830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 292
Target Start/End: Original strand, 3998078 - 3998152
Alignment:
Q  219 ggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||||| |||||||| || ||||||||| | ||    ||||||||| ||||||||||||||||||||    
T  3998078 ggttgttagtctactttgcacaatttcgggtagtgccgtgatttatcttaaagaaagcgacctggtcgtgactca 3998152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 292
Target Start/End: Original strand, 32221163 - 32221193
Alignment:
Q  262 gtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||||||||||||||||||||||    
T  32221163 gtcttaaagagagcgacctggtcgtgactca 32221193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 16953180 - 16953107
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaa 269  Q
    ||||||||||||||| ||  ||||||| |||||| ||||||||||  ||||||||| |  ||||||||||||||    
T  16953180 tgttttatcctggaggcgttgtggttgatagtctgccttgcacaattttgggtagtaccacgaaacgtcttaaa 16953107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 13059445 - 13059409
Alignment:
Q  256 cgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||||||||||||| |||||| |||||||    
T  13059445 cgaaacgtcttaaagagagcgatctggtcatgactca 13059409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 17360125 - 17360085
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacggg 119  Q
    ||||| ||||||||||||||||||||||||||  |||||||    
T  17360125 tccaaaggtgtgcccttggggtacccacttttacgaacggg 17360085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 47244283 - 47244247
Alignment:
Q  256 cgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  47244283 cgaaacgtcttaaagagggcgacctgatcgtgactca 47244247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 47574720 - 47574624
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||  ||||||| ||| || | |  ||||||||| || ||||||||    ||||||||||||||||||||||||| | ||||||||    
T  47574720 tgttttatcctggatgcggcgtgattgatattttgtcttgcacaattttgggtagtgtcaagaaacgtcttaaagagagcgacctgattgtgactca 47574624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 136; Significance: 8e-71; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 136 - 329
Target Start/End: Complemental strand, 14374292 - 14374093
Alignment:
Q  136 gaggtgtatatct-caagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtctacct 234  Q
    ||||||||||||| | |||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  14374292 gaggtgtatatctacgagcggttgtatactgtgcagtgtataatcgtaacagtgatctgggctgttttatcctggagacggcgtggttgttagtctaccc 14374193  T
Q  235 tgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca-----gtaatttcttttggcagtactaatttcaaaaacaaca 329  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||     ||| |||||| ||||||| ||||||||||||||||||    
T  14374192 tgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacccggtattttcttctggcagttctaatttcaaaaacaaca 14374093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 136 - 329
Target Start/End: Complemental strand, 7805228 - 7805029
Alignment:
Q  136 gaggtgtatatct-caagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtctacct 234  Q
    ||||||||||||| | |||| ||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7805228 gaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcctggagacggcgtggttgttagtctacct 7805129  T
Q  235 tgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca-----gtaatttcttttggcagtactaatttcaaaaacaaca 329  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||      || |||||||||||||| || |||||||||||||||    
T  7805128 tgcacaacttgggtagtgccgcgaaacgtcttaaagagagggacctggtcgtgactcaacccgatattttcttttggcagttcttatttcaaaaacaaca 7805029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 136 - 329
Target Start/End: Original strand, 24435807 - 24436006
Alignment:
Q  136 gaggtgtatatct-caagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtctacct 234  Q
    ||||||||||||| | |||| ||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  24435807 gaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcctggagacggcgtggttgatagtctacct 24435906  T
Q  235 tgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca-----gtaatttcttttggcagtactaatttcaaaaacaaca 329  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||     ||| ||||||||||||||  ||||| |||||||||||    
T  24435907 tgcacaacttggatagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtattttcttttggcagttttaattgcaaaaacaaca 24436006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 136 - 331
Target Start/End: Original strand, 13582628 - 13582830
Alignment:
Q  136 gaggtgtatatct-caagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtctacct 234  Q
    ||||||||||||| | |||| ||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13582628 gaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcctggagacggcgtggttgttagtctacct 13582727  T
Q  235 tgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca-----gtaatttc-ttttggcagtactaatttcaaaaacaac 328  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||     ||| ||||  |||||||||  ||||||||||||||||    
T  13582728 tgcacaaattgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtattttcaatttggcagttttaatttcaaaaacaac 13582827  T
Q  329 aat 331  Q
    |||    
T  13582828 aat 13582830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 14374848 - 14374726
Alignment:
Q  6 tgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggtaccca 105  Q
    ||||||||||||||||||| ||||||||| || ||| ||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14374848 tgtgtgacttaaaaatgtcccacattggttagtcaccccaactagaaagtgtttatataagggaagagtgacctccaagggtgtgcccttggggtaccca 14374749  T
Q  106 cttttgtgaacgggtgaacgctt 128  Q
    |||||||||||||||||||||||    
T  14374748 cttttgtgaacgggtgaacgctt 14374726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 7805797 - 7805675
Alignment:
Q  6 tgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggtaccca 105  Q
    ||||||||||||||||||| ||||||||| || ||| |||||||| |||  |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7805797 tgtgtgacttaaaaatgtcccacattggttagtcaccccaactagtaagtgtttatataagggaagagtgacctccaagggtgtgcccttggggtaccca 7805698  T
Q  106 cttttgtgaacgggtgaacgctt 128  Q
    |||||||||||||||||||||||    
T  7805697 cttttgtgaacgggtgaacgctt 7805675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 13582053 - 13582173
Alignment:
Q  8 tgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggtacccact 107  Q
    ||||||||||||||||| ||||||||| || ||| |||||||| |||  |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13582053 tgtgacttaaaaatgtcccacattggttagtcaccccaactagtaagtgtttatataagggaagagtgacctccaagggtgtgcccttggggtacccact 13582152  T
Q  108 tttgtgaacgggtgaacgctt 128  Q
    |||||||||||||||||||||    
T  13582153 tttgtgaacgggtgaacgctt 13582173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 17510160 - 17510058
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  17510160 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 17510061  T
Q  290 tca 292  Q
    |||    
T  17510060 tca 17510058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 24771350 - 24771452
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||||||    
T  24771350 tctgggttgttttatcctggagacggcgcggttgttagtctaccttgcacaacttaggtagtgccgcgaaacatcttaaagaaagcgacctggtcgtgac 24771449  T
Q  290 tca 292  Q
    |||    
T  24771450 tca 24771452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 36253928 - 36253826
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||| ||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  36253928 tctgggctgttttatcctggaggcggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 36253829  T
Q  290 tca 292  Q
    |||    
T  36253828 tca 36253826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 42019675 - 42019573
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||  ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  42019675 tctgggctgttttatcctggagacggcacggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 42019576  T
Q  290 tca 292  Q
    |||    
T  42019575 tca 42019573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 17505055 - 17504953
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    ||||||||||||||||||||||||| || ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| | |||||||||||||||    
T  17505055 tctgggctgttttatcctggagacgacgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtcgtgac 17504956  T
Q  290 tca 292  Q
    |||    
T  17504955 tca 17504953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 41858695 - 41858593
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| | ||||||||||||||| ||||||||| |||||||    
T  41858695 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgtgaaacgtcttaaagaaagcgacctgatcgtgac 41858596  T
Q  290 tca 292  Q
    |||    
T  41858595 tca 41858593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 1414051 - 1414146
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||| ||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||| ||||||||||    
T  1414051 tgttttatcttggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctgatcgtgactca 1414146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 24776805 - 24776910
Alignment:
Q  190 tctgggctgttttatcctggagacggcgt---ggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgt 286  Q
    ||||||||||||||||||||||||||||    ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||| |||||||    
T  24776805 tctgggctgttttatcctggagacggcgccgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacatggtcgt 24776904  T
Q  287 gactca 292  Q
    ||||||    
T  24776905 gactca 24776910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 41853650 - 41853548
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||| | ||||||||| ||||| |||||||| ||||||||||| |||||||  ||||||||||||||||| |||||||||||||||||    
T  41853650 tctgggctgttttatcgtagagacggcgcggttgctagtctactttgcacaacttaggtagtgtcgcgaaacgtcttaaagaaagcgacctggtcgtgac 41853551  T
Q  290 tca 292  Q
    |||    
T  41853550 tca 41853548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 26709206 - 26709102
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcaca--acttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtg 287  Q
    ||||||||||||||||||||||| | || ||||| ||||||||||||||||  | || |||||||| ||||||||||||||||| |||||||||||||||    
T  26709206 tctgggctgttttatcctggagatgacgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 26709107  T
Q  288 actca 292  Q
    |||||    
T  26709106 actca 26709102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 26978940 - 26978836
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcaca--acttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtg 287  Q
    ||||||||||||||||||||||| | || ||||| ||||||||||||||||  | || |||||||| ||||||||||||||||| |||||||||||||||    
T  26978940 tctgggctgttttatcctggagatgacgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 26978841  T
Q  288 actca 292  Q
    |||||    
T  26978840 actca 26978836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 26667367 - 26667271
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  26667367 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 26667271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 26938964 - 26938868
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  26938964 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 26938868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 29167973 - 29168069
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  29167973 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 29168069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 556790 - 556694
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||| |||||  | |||||||||||||||||||||||||||||||||||    
T  556790 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactca 556694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 561562 - 561466
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||| |||||  | |||||||||||||||||||||||||||||||||||    
T  561562 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactca 561466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 12103120 - 12103024
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||| |||||  ||||||||||||||||||||||||||||||| |||||    
T  12103120 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtaactca 12103024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 36423732 - 36423636
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||| |||||| ||||||||||| |||||| |||||||||| || ||| ||||| ||||||||||||||||||||||||||||||| ||||||    
T  36423732 tgttttattctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccgcgaaacgtcttaaagagagcgacctggtcgcgactca 36423636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 36428804 - 36428708
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||| ||| | || |||||||||||||||||||||||||||||||||||    
T  36428804 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagttccgcaaaacgtcttaaagagagcgacctggtcgtgactca 36428708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 36937511 - 36937607
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||| |||||   ||||||||||||||||||||||||||||||||||||    
T  36937511 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactca 36937607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 36942265 - 36942361
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||| |||||   ||||||||||||||||||||||||||||||||||||    
T  36942265 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactca 36942361  T

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Target: chr5; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 37248795 - 37248891
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-ggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| ||  ||||||||  ||||| |||||||||||||||||||||||||||||||    
T  37248795 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggtagtgccacgaaatgtcttaaagagagcgacctggtcgtgactca 37248891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 7451853 - 7451757
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| | ||||||||| |||||| |||||||||| || ||  |||||  |||||||||||||||||||||||||||||||||||||    
T  7451853 tgttttatcctggaggcagcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 7451757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 32461549 - 32461645
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || ||| |||||  | |||||||||||||||||||||||||||||||||||    
T  32461549 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactca 32461645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 39518505 - 39518409
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| || ||||||| || |||  ||||  |||||||||||||||||||||||||||||||||||||    
T  39518505 tgttttatcctggaggcggcgtggttgatagtctgccatgcacaattttgggcggtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 39518409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 39523144 - 39523048
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || |||  ||||  |||||||||||||||||||||||||||||||||||||    
T  39523144 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcggtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 39523048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 42001529 - 42001433
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| ||||||  ||| ||||| || ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  42001529 tgttttatcctggaggcggcgtggttgatagtctgtcttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 42001433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 28857958 - 28857861
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgctgcgaaacgtctt-aaagagagcgacctggtcgtgactca 292  Q
    |||||||||||| || ||||||||||||| ||||||||||||| ||||  |||||||| |||||||||||| ||||| |||||| |||||||||||||    
T  28857958 tgttttatcctgtaggcggcgtggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactca 28857861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 6514601 - 6514697
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| ||||||| ||  ||||| |||||  ||||||||||||||||||| ||| |||||||||||||    
T  6514601 tgttttatcctggaggcggcgtggttgatagtctgccttgcaaaattttgggcagtgccacgaaacgtcttaaagagagtgacttggtcgtgactca 6514697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 10759820 - 10759915
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||||  ||||| |||||  | |||||||||||| ||||||||||||||||||||||    
T  10759820 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaa-agagcgacctggtcgtgactca 10759915  T

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Target: chr5; HSP #38
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 12045139 - 12045235
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||| | ||||||  ||||||||| || ||| |||||  ||||||||||||||||| |||||||||||||||||||    
T  12045139 tgttttatcctggaggcggcgtggtcgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagggcgacctggtcgtgactca 12045235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 12501899 - 12501995
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| ||||||   |||||||| || ||| |||||  ||||||||||||||||||||||||||||| |||||||    
T  12501899 tgttttatcctggaggcggcgtggttgatagtctgttttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcatgactca 12501995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 41996760 - 41996664
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| ||||||  ||| ||||| || ||| |||||  |||||||||||||||||||| ||||||||||||||||    
T  41996760 tgttttatcctggaggcggcgtggttgatagtctgtcttacacaattttgggcagtgccacgaaacgtcttaaagagagcaacctggtcgtgactca 41996664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 3666027 - 3665931
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||| |||  |||||||||| |||||| |||||||||| || ||| |||||  ||||||||||| ||||||||||||| |||||||||||    
T  3666027 tgttttatcctagaggtggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttgaagagagcgacctagtcgtgactca 3665931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 12041932 - 12042028
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||| | ||||||| |  || ||| |||||  |||||||||||||||||| ||||||||||||||||||    
T  12041932 tgttttatcctggaggcggcgtggttgatagtttgccttgcatatttttgggcagtgccacgaaacgtcttaaagagaacgacctggtcgtgactca 12042028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 199 - 292
Target Start/End: Complemental strand, 40147988 - 40147894
Alignment:
Q  199 ttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||| ||||||||||| ||||||  |||||||||  ||||| |||||  |||||| ||||||||||||||||||| || |||||||    
T  40147988 ttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacctgatcatgactca 40147894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 197 - 281
Target Start/End: Original strand, 35679875 - 35679960
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctg 281  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||||  || |  |||||  ||||||||||||||||||||||||||    
T  35679875 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaatttttgacagtgccacgaaacgtcttaaagagagcgacctg 35679960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 12102831 - 12102927
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||| ||||| ||||||| |||||| ||||||||||  ||||  |||||  | ||| ||||||||||||||||||| |||||||||||    
T  12102831 tgttttatcctggtgacggtgtggttgatagtcttccttgcacaattttggccagtgccacaaaaagtcttaaagagagcgacctagtcgtgactca 12102927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 193 - 292
Target Start/End: Original strand, 13301482 - 13301581
Alignment:
Q  193 gggctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactc 291  Q
    ||||||||||||||||||| |  |  ||||||||||||||||||||||| || ||||||||| | ||   |||||||||| |||||||||||||||||||    
T  13301482 gggctgttttatcctggaggca-cacggttgttagtctaccttgcacaattttgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactc 13301580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 37652830 - 37652926
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||||||  |||||||||| |||||| |||||||||| || ||  | ||   |||||||||||||||||||||||||| ||||||||||    
T  37652830 tgttttatcctggaggtggcgtggttgatagtctgccttgcacaattttggacaatgtcacgaaacgtcttaaagagagcgacctgatcgtgactca 37652926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 41587160 - 41587256
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || |   ||||   |||||||||||||||||||| ||||||||||||||||    
T  41587160 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgaacagtgtcacgaaacgtcttaaagagagcaacctggtcgtgactca 41587256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 128
Target Start/End: Original strand, 9361776 - 9361892
Alignment:
Q  10 tgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggtacccacttt 109  Q
    ||||||||||||||  |||||||| ||| || || | |||| ||| ||||||||||| | || ||||  |||||||||||||||||| |||| |||||||    
T  9361776 tgacttaaaaatgtgccacattggagagacatactacctagtaagtatttatataagtggagggtga--tccaagggtgtgcccttgtggtatccacttt 9361873  T
Q  110 tgtgaacgggtgaacgctt 128  Q
    ||  ||||| |||||||||    
T  9361874 tgcaaacggatgaacgctt 9361892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 24776231 - 24776270
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  24776231 tccaagggtgtgcccttggggtacccacttttgtgaacgg 24776270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 118
Target Start/End: Complemental strand, 36254492 - 36254453
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  36254492 tccaagggtgtgcccttggggtacccacttttgtgaacgg 36254453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 6155419 - 6155515
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||| ||||||| ||||||  |||| | || || ||  |||||  |||||||||||||||||||||||||| ||||||||||    
T  6155419 tgttttatcctggaggcggtgtggttgatagtctgtcttgtaaaattttggacagtgccacgaaacgtcttaaagagagcgacctgatcgtgactca 6155515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 31986822 - 31986726
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||| || |||||   |||||| ||||||||||| || || ||||||||  ||||||||||||||||| ||||||||  ||||||||||    
T  31986822 tgttttatcctgaaggcggcgcaattgttaatctaccttgcataaactcgggtagtgtcgcgaaacgtcttaaagaaagcgaccttatcgtgactca 31986726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 24770777 - 24770816
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  24770777 tccaagggtgtgcccttggggtacccacttttgttaacgg 24770816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 292
Target Start/End: Original strand, 21323960 - 21324061
Alignment:
Q  191 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    ||||||||||||||||||||| |  |  ||||||||||||||||||||||| || || |||||| | ||   |||||||||| |||||||||||| ||||    
T  21323960 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcggatagtgccgtgatttgtcttaaagaaagcgacctggtcatgac 21324058  T
Q  290 tca 292  Q
    |||    
T  21324059 tca 21324061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 127
Target Start/End: Complemental strand, 31987420 - 31987350
Alignment:
Q  57 tttatataagggtagagtgacctccaagggtgtgcccttggggtacccacttttgtgaacgggtgaacgct 127  Q
    |||||||||| | || ||||||||||||| ||| ||||||||||||||| ||||| ||||| |||| ||||    
T  31987420 tttatataagcggagggtgacctccaaggatgtacccttggggtacccatttttgcgaacgagtgagcgct 31987350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 20181123 - 20181159
Alignment:
Q  256 cgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||||||| |||||||||||||||||    
T  20181123 cgaaacgtcttaaagagagtgacctggtcgtgactca 20181159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 118
Target Start/End: Original strand, 1413258 - 1413286
Alignment:
Q  90 gcccttggggtacccacttttgtgaacgg 118  Q
    |||||||||||||||||||||||||||||    
T  1413258 gcccttggggtacccacttttgtgaacgg 1413286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 37550032 - 37550076
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa 241  Q
    |||||||||||||||  |||||||||| |||||| ||||||||||    
T  37550032 tgttttatcctggaggtggcgtggttgatagtctgccttgcacaa 37550076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 136; Significance: 8e-71; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 136 - 329
Target Start/End: Complemental strand, 10106260 - 10106061
Alignment:
Q  136 gaggtgtatatct-caagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtctacct 234  Q
    ||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  10106260 gaggtgtatatctacgagcggttgtatattgtgcagtatataatcgtaacagtgatctgggttgttttatcctggagacggcgtggttgttagtctacct 10106161  T
Q  235 tgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca-----gtaatttcttttggcagtactaatttcaaaaacaaca 329  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||     ||| |||||||||||||| || |||||||||||||||    
T  10106160 tgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacccggtattttcttttggcagttcttatttcaaaaacaaca 10106061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 136 - 329
Target Start/End: Complemental strand, 13890970 - 13890771
Alignment:
Q  136 gaggtgtatatct-caagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtctacct 234  Q
    ||||||||||||| | ||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  13890970 gaggtgtatatctacgagcgattgtgtattgtgcagtatataatcgtaacagtgatctgggctgttttatcctggagacggtgtggttgttagtctacct 13890871  T
Q  235 tgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca-----gtaatttcttttggcagtactaatttcaaaaacaaca 329  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||     ||| ||||||||||||||| |||||| ||||||||||    
T  13890870 tgcacaacttgggtagtgccgcaaaacgtcttaaagagagcgacctggtcgtgactcaacccggtattttcttttggcagtattaatttaaaaaacaaca 13890771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 130 - 292
Target Start/End: Complemental strand, 14582261 - 14582099
Alignment:
Q  130 tatttagaggtgtatatctcaagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtc 229  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||    
T  14582261 tatttagaggtgtatatctcgagcgattgtatattgtgcagtgtataatcgtaacagtgatctggactgttttatcctggagacggtgtggttgttagtc 14582162  T
Q  230 taccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||||||||||| |||| |||||    
T  14582161 taccttgcacaactagggtagtgccgcgaaacttcttaaagagagcgacctgatcgtaactca 14582099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 130 - 292
Target Start/End: Original strand, 5602358 - 5602520
Alignment:
Q  130 tatttagaggtgtatatctcaagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtc 229  Q
    ||||| |||||||||||||| |||||||||||| |||||||||||||||||||| |||| ||||| |||||||||| |||||||||||||||||||||||    
T  5602358 tattttgaggtgtatatctcgagcgattgtatactgtgcagtgtataatcgtaatagtgatctggactgttttatcttggagacggcgtggttgttagtc 5602457  T
Q  230 taccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  5602458 taccttgcacaactagggtagtgcagcgaaacgtcttaaagagagcgatctggtcgtgactca 5602520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 151 - 292
Target Start/End: Complemental strand, 38734416 - 38734275
Alignment:
Q  151 agcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtag 250  Q
    ||||||||| || |||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  38734416 agcgattgtgtactgtgcagtatataatcgtaacagtgatctggactgttttatcctggagacggcgtggttgttagtctaccttgcacaactagggtag 38734317  T
Q  251 tgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||| ||||||||||||||||||||||||||||||||||||||    
T  38734316 tgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 38734275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 130 - 292
Target Start/End: Original strand, 26651099 - 26651261
Alignment:
Q  130 tatttagaggtgtatatct-caagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagt 228  Q
    ||||| ||||||||||||| | |||||||||||| |||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  26651099 tatttcgaggtgtatatctacgagcgattgtatactgtgcagtatataatcgtaacagtga-ctgggctgttttatcctggagacggcgtggttgttagt 26651197  T
Q  229 ctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||||||||||||| || |||| |||||||||||| |||||||||||||||||    
T  26651198 ctaccttgcacaacttgggtagtgccgcaaaacatcttaaagagagtgacctggtcgtgactca 26651261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 130 - 292
Target Start/End: Original strand, 19422807 - 19422973
Alignment:
Q  130 tatttagaggtgtatatctcaagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagt- 228  Q
    ||||| |||||||||||||| ||||||||||||  ||||||||||||||||||| |||| |||||||| |||||||||||||| ||||| |||||||||     
T  19422807 tattttgaggtgtatatctcgagcgattgtataccgtgcagtgtataatcgtaatagtgatctgggctattttatcctggagatggcgtagttgttagtc 19422906  T
Q  229 ---ctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
       ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||    
T  19422907 tacctaccttgcacaacttgggtagtgcagcgaaacgtcttaaagagagcgatctgatcgtgactca 19422973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 26650492 - 26650618
Alignment:
Q  1 gtgagtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||  || |||||||||||||||||||||||||| ||||||||||||||    
T  26650492 gtgagtgtgtgacttaaaaatgtcccacattggtgagccacatcaactagaaagtgtt-atataagggtagagtgacctccaaggatgtgcccttggggt 26650590  T
Q  101 acccacttttgtgaacgggtgaacgctt 128  Q
    ||||||||||||||||||||||||||||    
T  26650591 acccacttttgtgaacgggtgaacgctt 26650618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 31289484 - 31289367
Alignment:
Q  1 gtgagtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||    
T  31289484 gtgagtgtgtgacttaaaaatgtcccacattggtgagccacaccaactagaaagtgtttatataagggtagagtgacctccaagggtgtgcccttagggt 31289385  T
Q  101 acccacttttgtgaacgg 118  Q
    |||||||||||| |||||    
T  31289384 acccacttttgtaaacgg 31289367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 4 - 128
Target Start/End: Complemental strand, 13891531 - 13891407
Alignment:
Q  4 agtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggtacc 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||| |||||||||| ||||||    
T  13891531 agtgtgtgacttaaaaatgtcccacattggtgagccacaccaactagaaagtgtttatataagggaagagtgacctccaaggatgtgcccttgaggtacc 13891432  T
Q  104 cacttttgtgaacgggtgaacgctt 128  Q
    |||||||||||||||||||| ||||    
T  13891431 cacttttgtgaacgggtgaatgctt 13891407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 38734855 - 38734728
Alignment:
Q  1 gtgagtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggt 100  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||  ||||||||||||||||||||||| ||| ||||||||||| || |    
T  38734855 gtgagtgtgtgacttaaaaatgtcccatattggtgagccacaccaactagaaagtgtttatataagggtagagtgaccttcaaaggtgtgcccttaggat 38734756  T
Q  101 acccacttttgtgaacgggtgaacgctt 128  Q
    ||||||||||||||||||||||||||||    
T  38734755 acccacttttgtgaacgggtgaacgctt 38734728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 39746738 - 39746865
Alignment:
Q  1 gtgagtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggt 100  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||  |||||||||||||||||| |||||||||| |||||||||  |||    
T  39746738 gtgagtgtgtgacttaaaaatgtttcatattggtgagccacaccaactagaaagtgtttatataagggtagagtaacctccaaggatgtgcccttaaggt 39746837  T
Q  101 acccacttttgtgaacgggtgaacgctt 128  Q
    ||||||||||||||||| ||||||||||    
T  39746838 acccacttttgtgaacgagtgaacgctt 39746865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 10106765 - 10106643
Alignment:
Q  6 tgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggtaccca 105  Q
    ||||||||||||||||||| ||||||||| || ||| |||||||| |||  |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10106765 tgtgtgacttaaaaatgtcccacattggttagtcaccccaactagtaagtgtttatataaggggagagtgacctccaagggtgtgcccttggggtaccca 10106666  T
Q  106 cttttgtgaacgggtgaacgctt 128  Q
    |||||||||||||||||||||||    
T  10106665 cttttgtgaacgggtgaacgctt 10106643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 185 - 292
Target Start/End: Original strand, 39747153 - 39747260
Alignment:
Q  185 agtggtctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtc 284  Q
    |||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  39747153 agtgatctgggctgttttatcctggagacgacgtggttgctagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcaacctggtc 39747252  T
Q  285 gtgactca 292  Q
    ||||||||    
T  39747253 gtgactca 39747260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 11251106 - 11251208
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  11251106 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 11251205  T
Q  290 tca 292  Q
    |||    
T  11251206 tca 11251208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 37404409 - 37404511
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  37404409 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 37404508  T
Q  290 tca 292  Q
    |||    
T  37404509 tca 37404511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 36684708 - 36684810
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  |||||||| |||||||||||||||||||||||||||||||||||    
T  36684708 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 36684807  T
Q  290 tca 292  Q
    |||    
T  36684808 tca 36684810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 37409530 - 37409632
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    ||||||||||||||||||||| |||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  37409530 tctgggctgttttatcctggaaacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 37409629  T
Q  290 tca 292  Q
    |||    
T  37409630 tca 37409632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 3584703 - 3584601
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||| | ||||||||||||||||| |||||||||||||||||    
T  3584703 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagttccgcgaaacgtcttaaagaaagcgacctggtcgtgac 3584604  T
Q  290 tca 292  Q
    |||    
T  3584603 tca 3584601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 5725081 - 5724979
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||| ||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||||| ||||||||||||||||| |||||||||||||||||    
T  5725081 tctgtgctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 5724982  T
Q  290 tca 292  Q
    |||    
T  5724981 tca 5724979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 27716545 - 27716443
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    ||||||||||||||||||||||||| ||  |||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  27716545 tctgggctgttttatcctggagacgacgctgttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 27716446  T
Q  290 tca 292  Q
    |||    
T  27716445 tca 27716443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 192 - 292
Target Start/End: Original strand, 34318219 - 34318319
Alignment:
Q  192 tgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactc 291  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||| |  |||||||| |||||||||||||||||||||||| ||||||||||||    
T  34318219 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacttggtcgtgactc 34318318  T
Q  292 a 292  Q
    |    
T  34318319 a 34318319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 5730207 - 5730105
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||| ||||||||||||||||||||| | ||||| ||||||||||||||||| || |||||| | ||||||||||||||||| |||||||||||||||||    
T  5730207 tctgtgctgttttatcctggagacggtgcggttgctagtctaccttgcacaatttaggtagttccgcgaaacgtcttaaagaaagcgacctggtcgtgac 5730108  T
Q  290 tca 292  Q
    |||    
T  5730107 tca 5730105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 19406284 - 19406372
Alignment:
Q  40 acaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggtacccacttttgtgaacgggtgaacgctt 128  Q
    |||||||||||||||  |||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||| |||||||||    
T  19406284 acaccaactagaaagtgtttatataagggtagagtgacccccaagggtgtgcctttggggtacccactttcgtgaacggatgaacgctt 19406372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 48246676 - 48246756
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaag 270  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  48246676 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaag 48246756  T

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Target: chr1; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 208 - 292
Target Start/End: Original strand, 11387841 - 11387925
Alignment:
Q  208 ggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||| | ||||||||||||||||||||    
T  11387841 ggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactca 11387925  T

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Target: chr1; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 14582477 - 14582397
Alignment:
Q  1 gtgagtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctcc 81  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||   |||||||||||||||||||||||||    
T  14582477 gtgagtgtgtgacttaaaaatgtcccacattggtgaaccacaccaactagaaattttttatataagggtagagtgacctcc 14582397  T

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Target: chr1; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 51041463 - 51041557
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||| ||||| ||||||||||| |||||| |||||||||| ||||| |||||  |||||||||||||| ||||||||||||||||||||||    
T  51041463 tgttttatcttggaggcggcgtggttgatagtctgccttgcacaatttgggcagtgccacgaaacgtcttaaa-agagcgacctggtcgtgactca 51041557  T

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Target: chr1; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 10135551 - 10135455
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-ggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||| ||| ||||||||||| | |||| |||||||||| ||  ||||||||  |||||||||||||||||||||||||||||||||||||    
T  10135551 tgttttatcctagaggcggcgtggttgattgtctgccttgcacaattttaggtagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 10135455  T

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Target: chr1; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 23192817 - 23192913
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||||||  |||||||||| |||||| ||||| |||| || ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  23192817 tgttttatcctggaggaggcgtggttgatagtctgccttgtacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 23192913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 40166075 - 40165979
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||| ||| |||||| ||||||||||| |||||||||| || ||| |||||  ||||||||||||||||||||||| |||||||||||||    
T  40166075 tgttttatcctagaggcggcgttgttgttagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatggtcgtgactca 40165979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 208 - 277
Target Start/End: Complemental strand, 27711388 - 27711319
Alignment:
Q  208 ggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcga 277  Q
    |||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  27711388 ggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcga 27711319  T

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Target: chr1; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 19799013 - 19799109
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggg-tagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || || ||||||  |||||||||||||||||||||| ||| ||||||||||    
T  19799013 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttggatagtgccacgaaacgtcttaaagagagcgatctgatcgtgactca 19799109  T

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Target: chr1; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 288
Target Start/End: Original strand, 33301180 - 33301272
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtga 288  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || ||| |||||  |||||||||||||||||| ||||||||||||||    
T  33301180 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagaacgacctggtcgtga 33301272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 12179431 - 12179309
Alignment:
Q  5 gtgtgtgacttaaaaatgtctcacattggtgagccac----accaactagaaagcatttatataagggtagag-tgacctccaagggtgtgcccttgggg 99  Q
    ||||||||||||||||| ||  |||||||||||||||    ||||||||| |||  ||||||||||||| | | |||||| |||| |||||||||||||     
T  12179431 gtgtgtgacttaaaaatatcctacattggtgagccacgtacaccaactagcaagtgtttatataagggtggggatgacctgcaagtgtgtgcccttggga 12179332  T
Q  100 tacccacttttgtgaacgggtga 122  Q
    |||||||| ||||||||| ||||    
T  12179331 tacccactgttgtgaacgagtga 12179309  T

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Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 16035703 - 16035607
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| || |||  |||||||||||| ||  |||||  |||||||| |||||||| |||||||||||||||||||    
T  16035703 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaactttggacagtgccacgaaacgtgttaaagagggcgacctggtcgtgactca 16035607  T

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Target: chr1; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 16649613 - 16649708
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||| |||| ||||||||||| ||||||| ||||||||| || ||  |||||  | |||||||||||||||||||||||||||||||||||    
T  16649613 tgttttatcccggaggcggcgtggttgatagtctatcttgcacaattttggacagtgccac-aaacgtcttaaagagagcgacctggtcgtgactca 16649708  T

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Target: chr1; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 47451225 - 47451321
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-ggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||| ||||| ||||||||||| ||||||  ||||||||| ||  || |||||   ||||||||||||||||||||||||||||||||||||    
T  47451225 tgttttatcttggaggcggcgtggttgatagtctgtcttgcacaatttttggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactca 47451321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 47455386 - 47455482
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||  | |||  |||||||||||||||||||||||||||||||||||||    
T  47455386 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttggacattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 47455482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 191 - 292
Target Start/End: Original strand, 41097946 - 41098047
Alignment:
Q  191 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    ||||||||||||||||||||| |  |  ||||||||||||||||||||||| || ||||||||| | ||   |||||||||| |||||||||||||||||    
T  41097946 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgac 41098044  T
Q  290 tca 292  Q
    |||    
T  41098045 tca 41098047  T

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Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 10140184 - 10140088
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgg-gtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||| |||  |||||||||| | |||| |||||||||| || | |||||||  |||||||| ||||||||||||||||| ||||||||||    
T  10140184 tgttttatcctagaggtggcgtggttgattgtctgccttgcacaattttgagtagtgccacgaaacgtgttaaagagagcgacctgatcgtgactca 10140088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 12260091 - 12259995
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||  |||||||||||||| ||||||  ||||||||| || ||| ||||   ||||||||||||||||||||||| |||||||| ||||    
T  12260091 tgttttatcctaaagacggcgtggttgatagtctgtcttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacatggtcgtgtctca 12259995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 48246144 - 48246183
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  48246144 tccaagggtgtgcccttggggtacccacttttgtgaacgg 48246183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 219 - 292
Target Start/End: Complemental strand, 3094187 - 3094113
Alignment:
Q  219 ggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||| |||||| |||||||||| || ||| |||||   ||||||||||||||||||||||||||||||||||||    
T  3094187 ggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactca 3094113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 292
Target Start/End: Original strand, 8267853 - 8267926
Alignment:
Q  221 ttgttagtctaccttgcacaa-cttgggtagtg-ctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||||||||| || || ||||| | | ||||||||||||||| ||||||||||||||||||||    
T  8267853 ttgttagtctaccttgcacaaactcggatagtgtcggtgaaacgtcttaaagaaagcgacctggtcgtgactca 8267926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 292
Target Start/End: Complemental strand, 25855219 - 25855170
Alignment:
Q  243 ttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||| |||||  |||||||||||||||||||||||||||||||||||||    
T  25855219 ttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 25855170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 18784549 - 18784644
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||| |||||| ||||||||||| |||||| ||||||||||  || || |||||  ||||| |||||||| ||||||||||| ||||||||||    
T  18784549 tgttttattctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaaatgtcttaaa-agagcgacctgatcgtgactca 18784644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 292
Target Start/End: Original strand, 26927738 - 26927818
Alignment:
Q  213 cggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||| |||||| |||||||||| || ||| | |||  ||||||||||||||||||||||| | |||||||||||    
T  26927738 cggcgtggttgatagtctgccttgcacaattttgggcaatgccacgaaacgtcttaaagagagcgacttagtcgtgactca 26927818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 200 - 290
Target Start/End: Original strand, 39588370 - 39588461
Alignment:
Q  200 tttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgctgcgaaacgtcttaaagagagcgacctggtcgtgact 290  Q
    ||||||||||||  |||||||| | ||||||  ||||||||| || ||  |||||  |||||||||||||||||||||||||| ||||||||    
T  39588370 tttatcctggagtaggcgtggtagatagtctgtcttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctgatcgtgact 39588461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 118
Target Start/End: Complemental strand, 5730745 - 5730707
Alignment:
Q  80 ccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  5730745 ccaagggtgtgcccttggggtacacacttttgtgaacgg 5730707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 292
Target Start/End: Complemental strand, 33055139 - 33055038
Alignment:
Q  191 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    ||||||||||||||||||||| | ||  ||||| ||||||||||||||| |||| ||||||||| | ||   |||||||||| |||||| |||| |||||    
T  33055139 ctgggctgttttatcctggaggc-gcacggttgatagtctaccttgcacaaactcgggtagtgccgtgattagtcttaaagaaagcgacatggttgtgac 33055041  T
Q  290 tca 292  Q
    |||    
T  33055040 tca 33055038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 259 - 292
Target Start/End: Complemental strand, 16832133 - 16832100
Alignment:
Q  259 aacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||||||||||||||||||||||    
T  16832133 aacgtcttaaagagagcgacctggtcgtgactca 16832100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 292
Target Start/End: Original strand, 4632958 - 4633022
Alignment:
Q  229 ctaccttgcacaacttggg-tagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||| || || |||||| || ||||||||||||||||||||| | |||||||||||    
T  4632958 ctaccttgcacaaattcggatagtgccgcaaaacgtcttaaagagagcgacatagtcgtgactca 4633022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 25188272 - 25188368
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||| |||||||| |  ||||||||||||||||||||| ||||   ||||||| ||||||| |||| |||| ||| ||||| | ||||||||    
T  25188272 tgttttatcttggagacgacacggttgttagtctaccttgcacaaactcaagtagtgccgcgaaacttcttcaagaaagcaacctgatagtgactca 25188368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 118
Target Start/End: Complemental strand, 3585272 - 3585237
Alignment:
Q  83 agggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    |||||||||||||||||||| |||||||||||||||    
T  3585272 agggtgtgcccttggggtacacacttttgtgaacgg 3585237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 194 - 280
Target Start/End: Complemental strand, 12906251 - 12906166
Alignment:
Q  194 ggctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacct 280  Q
    |||||||||||||||| | || |||||||| |||||| | |||||||| || ||| |||||  |||||||||||||||||||||||||    
T  12906251 ggctgttttatcctgggg-cgtcgtggttgatagtctgc-ttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacct 12906166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 14724964 - 14724909
Alignment:
Q  73 gtgacctccaagggtgtgcccttggggtacccacttttgtgaacgggtgaacgctt 128  Q
    ||||||| ||| | |||||| |||||||||||||||||| |||||||||| |||||    
T  14724964 gtgacctacaaagatgtgccattggggtacccacttttgggaacgggtgagcgctt 14724909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 280
Target Start/End: Original strand, 24159797 - 24159882
Alignment:
Q  195 gctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacct 280  Q
    ||||||||||||||| |||| ||| |||| |||||| | |||||||| || ||| |||  | |||||||||||||||||||||||||    
T  24159797 gctgttttatcctggggacgtcgtcgttgatagtctgc-ttgcacaattttgggcagtattacgaaacgtcttaaagagagcgacct 24159882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 29825877 - 29825915
Alignment:
Q  80 ccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  29825877 ccaagggtctacccttggggtacccacttttgtgaacgg 29825915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 280
Target Start/End: Original strand, 2493818 - 2493901
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacct 280  Q
    ||||||||||||| | || |||||||| |||| | | |||||||| || ||| |||||  |||||||||||||||||||||||||    
T  2493818 tgttttatcctgggggcgccgtggttgatagtttgc-ttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacct 2493901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 135; Significance: 3e-70; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 130 - 332
Target Start/End: Complemental strand, 24528517 - 24528310
Alignment:
Q  130 tatttagaggtgtatatct-caagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagt 228  Q
    ||||| ||||||||||||| | ||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  24528517 tatttcgaggtgtatatctacgagcgattgtatattgtgcagtatataatcgtaacagtgatctgagctgttttatcctggagacggcgtggttgttagt 24528418  T
Q  229 ctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca----gtaatttcttttggcagtactaatttcaaaaa 324  Q
    ||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||    |  | ||| |||||||||||||||||||||||    
T  24528417 ctaccttgcacaacttgggtaatgccgcaaaacgtcttaaagagagcgacctggtcgtgactcaacccgataattcctttggcagtactaatttcaaaaa 24528318  T
Q  325 caacaata 332  Q
    ||||||||    
T  24528317 caacaata 24528310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 130 - 292
Target Start/End: Complemental strand, 9973624 - 9973462
Alignment:
Q  130 tatttagaggtgtatatctcaagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtc 229  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||    
T  9973624 tatttagaggtgtatatctcgagcgattgtatactgtgcagtgtataatcgtaacagtgatctgggttgttttatcctggagacggcgtggttgttcgtc 9973525  T
Q  230 taccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||    
T  9973524 taccttgcacaacttggatagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 9973462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 136 - 329
Target Start/End: Complemental strand, 33226571 - 33226373
Alignment:
Q  136 gaggtgtatatct-caagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtctacct 234  Q
    ||||||||||||| | |||||||||||| |||||||| |||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||    
T  33226571 gaggtgtatatctacgagcgattgtatactgtgcagtatataatcgtaacagtgatctgagctgttttatcctggtgacggcgtggttgttagtctacct 33226472  T
Q  235 tgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca----gtaatttcttttggcagtactaatttcaaaaacaaca 329  Q
    |||| ||||| |||||||| |||||||||||||||||||||||||||||||||||| |    |  | ||| |||||||| |||||||||||||||||||    
T  33226471 tgcataacttaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgacttaacgcgataattcctttggcagcactaatttcaaaaacaaca 33226373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 130 - 329
Target Start/End: Original strand, 28292436 - 28292638
Alignment:
Q  130 tatttagaggtgtatatct-caagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagt 228  Q
    ||||| ||||||||||||| | || ||||||||| |||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  28292436 tatttcgaggtgtatatctacgagtgattgtatactgtgcagtatataatcgtaacagtgatctgggctgttt-atcctggagacggcgtggttgttagt 28292534  T
Q  229 ctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgact-----cagtaatttcttttggcagtactaatttcaaaa 323  Q
    |||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||     | |||| ||| ||||||||||||||||||||||    
T  28292535 ctaccttgcacaacttggatagtgccgcgaaacgtcttaaa-agagcgacctggtcgtgacttaacccggtaa-ttcctttggcagtactaatttcaaaa 28292632  T
Q  324 acaaca 329  Q
     |||||    
T  28292633 ccaaca 28292638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 28291906 - 28292033
Alignment:
Q  1 gtgagtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggt 100  Q
    ||||| |||||||||||||||||| || |||||||||| |||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||    
T  28291906 gtgagcgtgtgacttaaaaatgtcccatattggtgagctacaccaactagaaagtgtttatataagggtatagtgacctccaagggtgtgcccttggggt 28292005  T
Q  101 acccacttttgtgaacgggtgaacgctt 128  Q
    ||||||||||||||||||||||||||||    
T  28292006 acccacttttgtgaacgggtgaacgctt 28292033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 24529119 - 24528991
Alignment:
Q  1 gtgagtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggt 100  Q
    ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||    
T  24529119 gtgagtgtgtgacttaaaaatatcctacattggtgagccacaccaactagaaagtgtttatataagggtagagtgacctccaagggtgtgcctttggggt 24529020  T
Q  101 acccacttttgtgaacgggtgaacgcttg 129  Q
    |||||||||| ||||||| ||||||||||    
T  24529019 acccacttttatgaacggatgaacgcttg 24528991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 7358063 - 7357936
Alignment:
Q  1 gtgagtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggt 100  Q
    ||||| |||||||||||||||||| || |||||||||||||||||| |||||||  ||||||||||||||||||||||||||||| |||||||||| |||    
T  7358063 gtgagcgtgtgacttaaaaatgtcccatattggtgagccacaccaattagaaagtgtttatataagggtagagtgacctccaaggatgtgcccttgaggt 7357964  T
Q  101 acccacttttgtgaacgggtgaacgctt 128  Q
    ||||||||||||||||||||||||||||    
T  7357963 acccacttttgtgaacgggtgaacgctt 7357936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 16539405 - 16539507
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  16539405 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 16539504  T
Q  290 tca 292  Q
    |||    
T  16539505 tca 16539507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 16626257 - 16626155
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  16626257 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 16626158  T
Q  290 tca 292  Q
    |||    
T  16626157 tca 16626155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 42572047 - 42571945
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  42572047 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 42571948  T
Q  290 tca 292  Q
    |||    
T  42571947 tca 42571945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 33238104 - 33238002
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  |||||||| |||||||||||||||||||||||||||||||||||    
T  33238104 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 33238005  T
Q  290 tca 292  Q
    |||    
T  33238004 tca 33238002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 47999077 - 47998975
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  |||||||| |||||||||||||||||||||||||||||||||||    
T  47999077 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 47998978  T
Q  290 tca 292  Q
    |||    
T  47998977 tca 47998975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 33227048 - 33226928
Alignment:
Q  1 gtgagtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggt 100  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||         
T  33227048 gtgagtgtgtgacttaaaaatgttccacattggtgagtcacaccaactagaaagtgtttatataagggtagagtgacctccaagagtgtgccctt----- 33226954  T
Q  101 acccacttttgtgaacgggtgaacgctt 128  Q
      ||||||||||||||||||||||||||    
T  33226953 --ccacttttgtgaacgggtgaacgctt 33226928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 2234623 - 2234725
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||||| ||||||||||||||||| ||| |||||||||||||    
T  2234623 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcaacctggtcgtgac 2234722  T
Q  290 tca 292  Q
    |||    
T  2234723 tca 2234725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 12934499 - 12934397
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||  |||||||| |||||| |||||||||| |||||||||||||||||    
T  12934499 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaactcaggtagtgccgcgaaatgtcttaaagaaagcgacctggtcgtgac 12934400  T
Q  290 tca 292  Q
    |||    
T  12934399 tca 12934397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 17495505 - 17495403
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||| ||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||| | |||||||||||||||||    
T  17495505 tctgggctgttttatcttggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgac 17495406  T
Q  290 tca 292  Q
    |||    
T  17495405 tca 17495403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 17557709 - 17557811
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||| ||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||| | |||||||||||||||||    
T  17557709 tctgggctgttttatcttggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgac 17557808  T
Q  290 tca 292  Q
    |||    
T  17557809 tca 17557811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 32212647 - 32212749
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||| ||| ||||| ||||||||||||||||| || |||||||| ||||||||||||||||| |||||||||||||||||    
T  32212647 tctgggctgttttatcctggagacagcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 32212746  T
Q  290 tca 292  Q
    |||    
T  32212747 tca 32212749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 33243281 - 33243179
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  |||||||| |||||||||||||||||||| ||||||||||||||    
T  33243281 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagtgacctggtcgtgac 33243182  T
Q  290 tca 292  Q
    |||    
T  33243181 tca 33243179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 47177112 - 47177214
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||| |||||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  47177112 tctgagctgttttatcctgaagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 47177211  T
Q  290 tca 292  Q
    |||    
T  47177212 tca 47177214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 47993902 - 47993800
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  |||||||| ||||||||||||||||||||||||||||| |||||    
T  47993902 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggttgtgac 47993803  T
Q  290 tca 292  Q
    |||    
T  47993802 tca 47993800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 43892960 - 43892858
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||| |||||||| | ||||||||||||||| |||||||||||||||||    
T  43892960 tctgagctgttttatcctggagacggcgcggttgctagtttaccttgcacaacttaggtagtgccgtgaaacgtcttaaagaaagcgacctggtcgtgac 43892861  T
Q  290 tca 292  Q
    |||    
T  43892860 tca 43892858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 190 - 283
Target Start/End: Original strand, 19309604 - 19309697
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggt 283  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||| |||| ||||||||||||||||| |||||||||||    
T  19309604 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtggtgccgcgaaacgtcttaaagacagcgacctggt 19309697  T

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Target: chr7; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 21081032 - 21081136
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcaca--acttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtg 287  Q
    |||||||||||||||||||||||||| | ||||| ||||||||||||||||  | || |||||||| ||||||||||||||||| |||||||||||||||    
T  21081032 tctgggctgttttatcctggagacggtgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 21081131  T
Q  288 actca 292  Q
    |||||    
T  21081132 actca 21081136  T

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Target: chr7; HSP #25
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 9973998 - 9973915
Alignment:
Q  1 gtgagtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaag 84  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||   || |||||||||||||||||||||||||    
T  9973998 gtgagtgtgtgacttaaaaatgtcccacattggtgagccacaccaactagaaattgttaatataagggtagagtgacctccaag 9973915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 4579603 - 4579507
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  4579603 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 4579507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 199 - 292
Target Start/End: Original strand, 3357634 - 3357728
Alignment:
Q  199 ttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||| ||||||||||||||||| |||||| ||||||||||||| |||  || | ||||||||||||||||||||||||||||||||||||||    
T  3357634 ttttatcatggagacggcgtggttgatagtctgccttgcacaactttgggctgtaccgcgaaacgtcttaaagagagcgacctggtcgtgactca 3357728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 9650967 - 9651063
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  9650967 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 9651063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 23246933 - 23247029
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||| |||||  |||||| ||||||||||||||||||||||||||||||    
T  23246933 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacctggtcgtgactca 23247029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 23866163 - 23866067
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  23866163 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 23866067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 26341294 - 26341198
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||| |||||  ||||| |||||||||||||||||||||||||||||||    
T  26341294 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcgtgactca 26341198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 4930328 - 4930232
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||| |  ||| ||||| || ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  4930328 tgttttatcctggaggcggcgtggttgatagtatgacttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 4930232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 8076145 - 8076049
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-ggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| | ||||||||| ||||||  ||||||||| ||  || |||||  |||||||||||||||||||||||||||||||||||||    
T  8076145 tgttttatcctggaggcagcgtggttgatagtctgtcttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 8076049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 13314236 - 13314332
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| || ||||| || ||||||||||||||||| || ||| ||| |  |||||||||||||||||||||| ||||||||||||||    
T  13314236 tgttttatcctggaggcgacgtggctgatagtctaccttgcacaattttgggcagtaccacgaaacgtcttaaagagagcgatctggtcgtgactca 13314332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 10388367 - 10388461
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| |||||| |||| | ||||| | ||||||||||||| | |||  | |||||||||||||||||||||||||||||||||||    
T  10388367 tgttttatcctggaggcggcgttgttgat-gtctatcatgcacaacttgggcaatgccacaaaacgtcttaaagagagcgacctggtcgtgactca 10388461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 225 - 292
Target Start/End: Original strand, 22857715 - 22857782
Alignment:
Q  225 tagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||||||||||| | |||||| ||||||||||||||||| ||||||||| ||||||||||    
T  22857715 tagtctaccttgcacaacttagatagtgccgcgaaacgtcttaaagaaagcgacctgatcgtgactca 22857782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 44423137 - 44423233
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| |||||| |||| |||||| ||||| |||| || ||| |||||  |||||||||||||||||||||| ||| ||||||||||    
T  44423137 tgttttatcctggaggcggcgtagttgatagtctgccttgaacaattttggtcagtgccacgaaacgtcttaaagagagcgatctgatcgtgactca 44423233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 47762438 - 47762348
Alignment:
Q  4 agtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgccctt 95  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||| ||   ||||||||| ||| | ||||||||||||| |||||||||    
T  47762438 agtgtgtgacttaaaaatgttccacattagtgagccacaccaactagtaaatgtttatataaaggt-gggtgacctccaaggatgtgccctt 47762348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 191 - 292
Target Start/End: Complemental strand, 27256343 - 27256242
Alignment:
Q  191 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    ||||||||||||||||||||| |  |  ||||||||||||||||||||||| || ||||||||| | ||   |||||||||| |||||||||||||||||    
T  27256343 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgac 27256245  T
Q  290 tca 292  Q
    |||    
T  27256244 tca 27256242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 8268388 - 8268292
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||| |||||  |||||||||| ||||||  ||||||||| || ||  |||||  | |||||||||||||||||||||||||||||||||||    
T  8268388 tgttttatcatggaggtggcgtggttgatagtctgtcttgcacaattttggacagtgccacaaaacgtcttaaagagagcgacctggtcgtgactca 8268292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 12254174 - 12254078
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaac-ttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||| || ||||||| ||| |||||| ||||||||||| || || |||||  | |||| ||||||||||||||||||||||| ||||||    
T  12254174 tgttttatcctgtaggcggcgtgattgatagtctgccttgcacaactttaggcagtgccacaaaacatcttaaagagagcgacctggtcgcgactca 12254078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 44510677 - 44510773
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| ||||||  |||||||||  ||||  |||||  | |||||||||||||||||| | ||||||||||||||    
T  44510677 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttggacagtgccacaaaacgtcttaaagagagcaatctggtcgtgactca 44510773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 16538845 - 16538884
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  16538845 tccaagggtgtgcccttggggtacccacttttgtgaacgg 16538884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 118
Target Start/End: Complemental strand, 16626817 - 16626778
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  16626817 tccaagggtgtgcccttggggtacccacttttgtgaacgg 16626778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 118
Target Start/End: Complemental strand, 17496075 - 17496036
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17496075 tccaagggtgtgcccttggggtacccacttttgtgaacgg 17496036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 17557139 - 17557178
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17557139 tccaagggtgtgcccttggggtacccacttttgtgaacgg 17557178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 42627214 - 42627289
Alignment:
Q  214 ggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtga 288  Q
    |||||||||| |||||| | |||||||| || |||| ||||  |||||||||||||||||||||||||||||||||    
T  42627214 ggcgtggttgatagtctgctttgcacaattttgggttgtgccacgaaacgtcttaaagagagcgacctggtcgtga 42627289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 118
Target Start/End: Complemental strand, 43893517 - 43893478
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  43893517 tccaagggtgtgcccttggggtacccacttttgtgaacgg 43893478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 213 - 292
Target Start/End: Complemental strand, 47761069 - 47760985
Alignment:
Q  213 cggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgt----cttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||||||||||| || ||||| ||||||||||||||||| ||||    ||||||||||||| |||| ||||||||||    
T  47761069 cggcgtggttgttagtctacattacacaaacttgggtagtgctgcgagacgtacatcttaaagagagcggcctgatcgtgactca 47760985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 27238337 - 27238241
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgg-gtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||| || || ||||||| ||| |||||| |||| ||||| || | | |||||  | |||||||||||||||||||||||||||||||||||    
T  27238337 tgttttatcttgcaggcggcgtgattgatagtctgccttacacaattttgagcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactca 27238241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 118
Target Start/End: Complemental strand, 12935059 - 12935020
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  12935059 tccaatggtgtgcccttggggtacccacttttgtgaacgg 12935020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 115
Target Start/End: Original strand, 21080493 - 21080529
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaa 115  Q
    |||||||||||||||||||||||| ||||||||||||    
T  21080493 tccaagggtgtgcccttggggtacacacttttgtgaa 21080529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 111
Target Start/End: Complemental strand, 42572575 - 42572543
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttg 111  Q
    |||||||||||||||||||||||||||||||||    
T  42572575 tccaagggtgtgcccttggggtacccacttttg 42572543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 2234124 - 2234163
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||||||||| |||||||||||| |||||||||||||||    
T  2234124 tccaagggtgttcccttggggtacacacttttgtgaacgg 2234163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 19309048 - 19309087
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  19309048 tccaaggatgtgcccttggggtacctacttttgtgaacgg 19309087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 32212137 - 32212176
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  32212137 tccaagggtgtgtgcttggggtacccacttttgtgaacgg 32212176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 16372443 - 16372397
Alignment:
Q  246 ggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||  |||||| |||||||||||||||| |||||||||||||    
T  16372443 ggtagtgccacgaaacatcttaaagagagcgacttggtcgtgactca 16372397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 292
Target Start/End: Complemental strand, 19640395 - 19640298
Alignment:
Q  195 gctgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||||| || |  |||| |||||||||||||||||| || ||||| ||  | ||||||||||||||| || ||| || ||||||||||    
T  19640395 gctgttttatcctggaggcg-cacggttcttagtctaccttgcacaaactcgggtaatgtcgtgaaacgtcttaaagaaagagacatgatcgtgactca 19640298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 292
Target Start/End: Complemental strand, 29151027 - 29150933
Alignment:
Q  199 ttttatcctggagacggcgtggttgttagtctaccttgcacaacttgg-gtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||| ||||| || |||||||| |||| | |||||||||| || | | ||||   |||||||||||||| ||||||| ||||||||||||||    
T  29151027 ttttatcttggaggcgacgtggttgatagtttgccttgcacaattttgagcagtgtcacgaaacgtcttaaaaagagcgatctggtcgtgactca 29150933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 6590983 - 6591027
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa 241  Q
    |||||||||||| || ||||||||||| |||||| ||||||||||    
T  6590983 tgttttatcctgaaggcggcgtggttgatagtctgccttgcacaa 6591027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 135; Significance: 3e-70; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 130 - 292
Target Start/End: Complemental strand, 20810534 - 20810372
Alignment:
Q  130 tatttagaggtgtatatctcaagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtc 229  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||    
T  20810534 tatttagaggtgtatatctcgagcgattgtatactgtgcagtgtataatcgtaacaatgatctgagctgttttatcctggagacggcgtggttgttagtc 20810435  T
Q  230 taccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20810434 taccttgcacaactagggtagtgctgcgaaacgtcttaaagagaacgacctggtcgtgactca 20810372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 130 - 292
Target Start/End: Original strand, 33089276 - 33089438
Alignment:
Q  130 tatttagaggtgtatatctcaagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtc 229  Q
    |||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  33089276 tatttagaggtgtatatctcgagcgattgtatactgtgcaatgtataatcgtaacagtgatctgagctgttttatcctagagacggcgtggttgttagtc 33089375  T
Q  230 taccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33089376 taccttgcacaactagggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 33089438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 136 - 329
Target Start/End: Complemental strand, 13022184 - 13021985
Alignment:
Q  136 gaggtgtatatct-caagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtctacct 234  Q
    ||||||||||||| | ||||||||| || |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13022184 gaggtgtatatctacgagcgattgtgtactgtgcagtatataatcgtaacagtgatctgggctgttttatcctggagacggcgtggttgttagtctacct 13022085  T
Q  235 tgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca-----gtaatttcttttggcagtactaatttcaaaaacaaca 329  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||      ||||| |||||||||||| | |||||||||||||||    
T  13022084 tgcacaacttgggtagtgccgcgaaacgttttaaaaagagcgacctggtcgtgactcaacccgataattccttttggcagtattgatttcaaaaacaaca 13021985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 131 - 292
Target Start/End: Complemental strand, 26962220 - 26962059
Alignment:
Q  131 atttagaggtgtatatctcaagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtct 230  Q
    |||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||    
T  26962220 attttgaggtgtatatctcgagcgattatatattgtgcagtgtataatcgtaacagtgatctgtgctgttttatcctggagacggcgtgtttgttagtct 26962121  T
Q  231 accttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| |||||||  |||||||||||||||||||||| ||||||||||||||    
T  26962120 accttgcacaacttgtgtagtgccacgaaacgtcttaaagagagcgatctggtcgtgactca 26962059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 130 - 329
Target Start/End: Complemental strand, 53119690 - 53119486
Alignment:
Q  130 tatttagaggtgtatatct-caagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagt 228  Q
    ||||| |||||| |||||| | |||||||||||| |||||||| |||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  53119690 tatttcgaggtgcatatctacgagcgattgtatactgtgcagtatataatcgtaacagtgatctggcctgttttatcctagagacggcgtggttgttagt 53119591  T
Q  229 ctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca-----gtaatttcttttggcagtactaatttcaaaa 323  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||     |||| ||| ||||||||||||||||||||||    
T  53119590 ctaccttgcacaacttgagtagtgccgcgaaacgtcttaaagagagcgacctgatcgtgactcaacccggtaa-ttcctttggcagtactaatttcaaaa 53119492  T
Q  324 acaaca 329  Q
    | ||||    
T  53119491 ataaca 53119486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 53120250 - 53120123
Alignment:
Q  1 gtgagtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||    
T  53120250 gtgagtgtgtgacttaaaaatgtcccacattggtgagccacaccaactagaaagtgtttatataagggtacagtgacctccaagggtgtgcccttggggt 53120151  T
Q  101 acccacttttgtgaacgggtgaacgctt 128  Q
    |||||||||||||||| |||||||||||    
T  53120150 acccacttttgtgaacaggtgaacgctt 53120123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 13022778 - 13022651
Alignment:
Q  1 gtgagtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||| ||||||||||||||||||||| |||||||||    
T  13022778 gtgagtgtgtgacttaaaaatgtcccacattggtgagccacaccaattagaaagtgtttatataagggaagagtgacctccaagggtgtgaccttggggt 13022679  T
Q  101 acccacttttgtgaacgggtgaacgctt 128  Q
    ||||||||||||||||||||||||||||    
T  13022678 acccacttttgtgaacgggtgaacgctt 13022651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 33088680 - 33088807
Alignment:
Q  1 gtgagtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggt 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  33088680 gtgagtgtgtgacttaaaaatgtcccacattggtgagccaaaccaactagaaagtgtttatataagggtagagtgacctccaagggtgtgcccttggggt 33088779  T
Q  101 acccacttttgtgaacgggtgaacgctt 128  Q
    |||||||||| | |||||||||||||||    
T  33088780 acccacttttataaacgggtgaacgctt 33088807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 153 - 292
Target Start/End: Original strand, 38436947 - 38437086
Alignment:
Q  153 cgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtg 252  Q
    |||||||||| |||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  38436947 cgattgtatactgtgcagtatataatcgtaacaatgatctgggctgttttatcctggagacggcgtggttgttagtctacctttcacaacttggatagtg 38437046  T
Q  253 ctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |  |||||||||||||||| || |||||| ||||||||||    
T  38437047 ccacgaaacgtcttaaagaaagtgacctgatcgtgactca 38437086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 26962749 - 26962640
Alignment:
Q  5 gtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggtaccc 104  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26962749 gtgtgtgacttaaaaaagtctcacattggtgagccacaccaactagaaagtgtttatataagggtagagtgaccttcaagggtgtgcccttggggtaccc 26962650  T
Q  105 acttttgtga 114  Q
    ||||||||||    
T  26962649 acttttgtga 26962640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 38436334 - 38436461
Alignment:
Q  1 gtgagtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggt 100  Q
    ||||| |||||||||||||||||| ||||||||||||||||| |||||| ||||  |||||||||||||||||||||| |||| ||||||| ||| ||||    
T  38436334 gtgagcgtgtgacttaaaaatgtcccacattggtgagccacatcaactaaaaagtgtttatataagggtagagtgaccaccaaaggtgtgctcttagggt 38436433  T
Q  101 acccacttttgtgaacgggtgaacgctt 128  Q
    ||||||||||||||||||||||||||||    
T  38436434 acccacttttgtgaacgggtgaacgctt 38436461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 3476939 - 3477041
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  3476939 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 3477038  T
Q  290 tca 292  Q
    |||    
T  3477039 tca 3477041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 17368821 - 17368719
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  17368821 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 17368722  T
Q  290 tca 292  Q
    |||    
T  17368721 tca 17368719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 190 - 293
Target Start/End: Original strand, 34129162 - 34129265
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||||| ||||||||||||||||| |||||||||||||||||    
T  34129162 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 34129261  T
Q  290 tcag 293  Q
    ||||    
T  34129262 tcag 34129265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 20090655 - 20090757
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  |||||||| |||||||||||||||||||||||||||||||||||    
T  20090655 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 20090754  T
Q  290 tca 292  Q
    |||    
T  20090755 tca 20090757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 20095780 - 20095882
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  |||||||| |||||||||||||||||||||||||||||||||||    
T  20095780 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 20095879  T
Q  290 tca 292  Q
    |||    
T  20095880 tca 20095882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 4 - 120
Target Start/End: Complemental strand, 26929438 - 26929322
Alignment:
Q  4 agtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggtacc 103  Q
    |||||||||||||||||||| |||||||||||||  ||||||||||| |||  ||||||||||||| | |||||||||||| ||||||||||||||||||    
T  26929438 agtgtgtgacttaaaaatgtttcacattggtgagttacaccaactagcaagtgtttatataagggtggggtgacctccaagtgtgtgcccttggggtacc 26929339  T
Q  104 cacttttgtgaacgggt 120  Q
    |||||||| ||||||||    
T  26929338 cacttttgcgaacgggt 26929322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 15763023 - 15763125
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||  |  |||||||| |||||||||||||||||||||||||||||||||||    
T  15763023 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacagttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 15763122  T
Q  290 tca 292  Q
    |||    
T  15763123 tca 15763125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 15768184 - 15768286
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||  |  |||||||| |||||||||||||||||||||||||||||||||||    
T  15768184 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacagttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 15768283  T
Q  290 tca 292  Q
    |||    
T  15768284 tca 15768286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 55128892 - 55128790
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| ||||||||||||||||| | |||||||||||||||    
T  55128892 tctgggctgttttatcctggagacggcgcggttgctagtctaccttacacaacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtcgtgac 55128793  T
Q  290 tca 292  Q
    |||    
T  55128792 tca 55128790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 196 - 292
Target Start/End: Complemental strand, 54270740 - 54270644
Alignment:
Q  196 ctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| |||||| |||||||||| ||||||||||||||||||||    
T  54270740 ctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaatgtcttaaagaaagcgacctggtcgtgactca 54270644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 3482416 - 3482518
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||| ||| |||||| |||||||||| |||||||||||||||||    
T  3482416 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaaattaggtaatgccgcgaaaagtcttaaagaaagcgacctggtcgtgac 3482515  T
Q  290 tca 292  Q
    |||    
T  3482516 tca 3482518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 4117593 - 4117695
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||| ||| ||||| |||||||||||||||||||| |||||||| |||||| ||||||| || |||||||||||||||||    
T  4117593 tctgggctgttttatcctggagacagcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaatgtcttaacgaaagcgacctggtcgtgac 4117692  T
Q  290 tca 292  Q
    |||    
T  4117693 tca 4117695  T

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Target: chr3; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 17364167 - 17364063
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttg--cacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtg 287  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||  ||||| || |||||||| ||||||||||||||||| |||||||||||||||    
T  17364167 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 17364068  T
Q  288 actca 292  Q
    |||||    
T  17364067 actca 17364063  T

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Target: chr3; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 17357940 - 17357836
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttg--cacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtg 287  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||  ||||| || |||||||| ||||||||||||||||| | |||||||||||||    
T  17357940 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaatcgacctggtcgtg 17357841  T
Q  288 actca 292  Q
    |||||    
T  17357840 actca 17357836  T

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Target: chr3; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 195 - 292
Target Start/End: Original strand, 27605133 - 27605231
Alignment:
Q  195 gctgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||| ||| ||| || |||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||| |||||||||||||    
T  27605133 gctgttttatcctagaggcggtgtagttgttagtctaccttgcacaaactcgggtagtgctgcgaaatgtcttaaagagagcgacttggtcgtgactca 27605231  T

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Target: chr3; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 30341837 - 30341939
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    ||||||||||||||||||||||| || | ||||| ||||||||||| ||||| || |||||||| ||||||||||||||||| || ||||||||||||||    
T  30341837 tctgggctgttttatcctggagatggtgcggttgctagtctaccttacacaatttaggtagtgccgcgaaacgtcttaaagaaagtgacctggtcgtgac 30341936  T
Q  290 tca 292  Q
    |||    
T  30341937 tca 30341939  T

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Target: chr3; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 758368 - 758464
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || |||||||||  |||||||||||||||||||||| ||||||||||||||    
T  758368 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagagcgatctggtcgtgactca 758464  T

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Target: chr3; HSP #29
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 20811141 - 20811014
Alignment:
Q  1 gtgagtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaag-ggtgtgcccttgggg 99  Q
    |||||||||||||||||||||||| ||||||||| | ||||| |||||| ||||  ||||||||| ||||||||||| ||||||  |||| |||||||||    
T  20811141 gtgagtgtgtgacttaaaaatgtcccacattggtaaaccacatcaactaaaaagtgtttatataaaggtagagtgacttccaagatgtgt-cccttgggg 20811043  T
Q  100 tacccacttttgtgaacgggtgaacgctt 128  Q
    |||||||| || || ||||||||||||||    
T  20811042 tacccactcttttgcacgggtgaacgctt 20811014  T

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Target: chr3; HSP #30
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 23666123 - 23666219
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  23666123 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 23666219  T

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Target: chr3; HSP #31
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 24038371 - 24038467
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  24038371 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 24038467  T

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Target: chr3; HSP #32
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 39775728 - 39775824
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  39775728 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 39775824  T

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Target: chr3; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 8069772 - 8069677
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| ||||  |||||  |||||||||||||||||||||||||||||||||||||    
T  8069772 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaatttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 8069677  T

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Target: chr3; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 182 - 292
Target Start/End: Original strand, 21494287 - 21494398
Alignment:
Q  182 aacagtggtctgggctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgctgcgaaacgtcttaaagagagcgacct 280  Q
    |||||||  ||| |||||||||||| |||||||||| ||||||||||||||||||||| |||||||||| ||  | || || ||||||||||||||||||    
T  21494287 aacagtgaactgagctgttttatcccggagacggcgcggttgttagtctaccttgcacaaacttgggtactgtcgtgatacatcttaaagagagcgacct 21494386  T
Q  281 ggtcgtgactca 292  Q
    ||||||||||||    
T  21494387 ggtcgtgactca 21494398  T

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Target: chr3; HSP #35
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 196 - 292
Target Start/End: Original strand, 2617255 - 2617352
Alignment:
Q  196 ctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||||||| ||||| ||||||||||||||||||||| |||| | ||||||| ||||||||||||||||| |||||| |||| ||||||||    
T  2617255 ctgttttatcctggaggcggcgcggttgttagtctaccttgcacaaactcgagtagtgccgcgaaacgtcttaaagaaagcgacatggttgtgactca 2617352  T

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Target: chr3; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 3672679 - 3672583
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||| |||||   ||||||||||||||||||||||||||||||||||||    
T  3672679 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactca 3672583  T

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Target: chr3; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 3692711 - 3692615
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||| |||||   ||||||||||||||||||||||||||||||||||||    
T  3692711 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactca 3692615  T

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Target: chr3; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 11777299 - 11777219
Alignment:
Q  5 gtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagg 85  Q
    |||||||||||||||||||| |||||||||||||||||| |||||| |||  ||||||||||||||| |||||||||||||    
T  11777299 gtgtgtgacttaaaaatgtcccacattggtgagccacactaactagcaagtgtttatataagggtagggtgacctccaagg 11777219  T

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Target: chr3; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 14438695 - 14438791
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| | |||| |||||||||| || |||||||||  ||||||||||||||||| |||||||||||||||||||    
T  14438695 tgttttatcctggaggcggcgtggttgattgtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagggcgacctggtcgtgactca 14438791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 18467318 - 18467222
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||  |||||| |||||||||| || ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  18467318 tgttttatcctggaggcggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 18467222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 20520147 - 20520051
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||| ||||| ||||||||||| |||||| |||||||||| |||||| |||||  ||||||||||||||||||| |||||||||||||||||    
T  20520147 tgttttatcttggaggcggcgtggttgatagtctcccttgcacaatcttgggcagtgccacgaaacgtcttaaagagagtgacctggtcgtgactca 20520051  T

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Target: chr3; HSP #42
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 6025802 - 6025709
Alignment:
Q  5 gtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggg 98  Q
    |||||||| |||||||||||||||||||||||| ||||| |||||| |||  ||||||||||| | | ||||||||||||| ||||||||||||    
T  6025802 gtgtgtgatttaaaaatgtctcacattggtgagtcacactaactagcaagtgtttatataaggatggggtgacctccaaggatgtgcccttggg 6025709  T

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Target: chr3; HSP #43
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 190 - 290
Target Start/End: Complemental strand, 10321545 - 10321444
Alignment:
Q  190 tctgggctgtttt-atcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtga 288  Q
    ||||||||||||| || ||||||||  || ||||| ||||||||||||||||| ||  ||||||| ||||||||||||||||| ||||||||||||||||    
T  10321545 tctgggctgtttttattctggagacaacgcggttgctagtctaccttgcacaatttaagtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 10321446  T
Q  289 ct 290  Q
    ||    
T  10321445 ct 10321444  T

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Target: chr3; HSP #44
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 7571218 - 7571314
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||| ||| ||||||  ||||||||| || ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  7571218 tgttttatcctggaggcggcgtgattgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 7571314  T

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Target: chr3; HSP #45
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 49971424 - 49971520
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggg-tagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||| ||| |||||| |||||||||| || || ||||||  |||||||||||||||||| ||||||||||||||||||    
T  49971424 tgttttatcctggaggcggcgtgattgatagtctgccttgcacaattttggatagtgccacgaaacgtcttaaagagatcgacctggtcgtgactca 49971520  T

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Target: chr3; HSP #46
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 197 - 291
Target Start/End: Complemental strand, 8883263 - 8883168
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactc 291  Q
    ||||||||||||||| | ||||||||| ||||||  ||||||||| || ||| |||||  ||||||||||||||||||||||||||||||||||||    
T  8883263 tgttttatcctggaggcagcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactc 8883168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 3033737 - 3033641
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||| ||| ||| ||||||| |||||| |||||||||| || ||| |||||   ||||||||||||||||||||||||||||||||||||    
T  3033737 tgttttatccttgaggcggtgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactca 3033641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 3419088 - 3418992
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||| ||  |||||||||| |||||| |||||||||| || ||| |||||  ||||||||||||||||||||||| |||||||||||||    
T  3419088 tgttttatcctgaaggtggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacttggtcgtgactca 3418992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 199 - 272
Target Start/End: Complemental strand, 26706877 - 26706803
Alignment:
Q  199 ttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgctgcgaaacgtcttaaagag 272  Q
    ||||||||||||| |||||  |||||||||||||||||||| ||||||| |||||||||||||||||||| ||||    
T  26706877 ttttatcctggaggcggcgcagttgttagtctaccttgcacaaacttggatagtgctgcgaaacgtcttagagag 26706803  T

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Target: chr3; HSP #50
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 32474680 - 32474774
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||||||||||||||| ||||||  |||||||||  ||||| |||||  |||||||||||  ||||||||||||||||||| ||||    
T  32474680 tgttttatcctggagacggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctt--agagagcgacctggtcgtggctca 32474774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 8888023 - 8887927
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||  |||||  | |||||||||||||||||||||||||||||||||||    
T  8888023 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttggacagtgcaacaaaacgtcttaaagagagcgacctggtcgtgactca 8887927  T

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Target: chr3; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 288
Target Start/End: Original strand, 12112641 - 12112733
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgctgcgaaacgtcttaaagagagcgacctggtcgtga 288  Q
    ||||||||||||||| ||| ||||||| ||||||  |||||||||||| ||  |||||  ||||||||||||||||||||||||| |||||||    
T  12112641 tgttttatcctggaggcggtgtggttgatagtctgtcttgcacaactttggacagtgccacgaaacgtcttaaagagagcgacctagtcgtga 12112733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 12965873 - 12965969
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || ||| |||||    |||||||||||||||||||||||||| ||||||||    
T  12965873 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccataaaacgtcttaaagagagcgacctggttgtgactca 12965969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 25726841 - 25726889
Alignment:
Q  244 tgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25726841 tgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 25726889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 1688910 - 1688980
Alignment:
Q  221 ttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgact 290  Q
    |||||| |||||||||||||| || ||||||||| || |||||||||||||| ||||||||||||||||||    
T  1688910 ttgttaatctaccttgcacaaactcgggtagtgccgcaaaacgtcttaaagaaagcgacctggtcgtgact 1688980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 191 - 292
Target Start/End: Original strand, 10586177 - 10586278
Alignment:
Q  191 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    ||||||||||||||||||||| |  |  ||||||||||||||||||||||| || ||||||||| | ||   |||||||||| |||||||||||||||||    
T  10586177 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgac 10586275  T
Q  290 tca 292  Q
    |||    
T  10586276 tca 10586278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 18472100 - 18472005
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||||  || || |||||  || ||| || |||||||||||||||||||||||||||    
T  18472100 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacg-aacatcgtaaagagagcgacctggtcgtgactca 18472005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 29350333 - 29350237
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| |||| |||| | | |||| |||||||||| || ||| |||||  |||||||||||||||| |||||| |||||||||||||    
T  29350333 tgttttatcctggaggcggcatggtagatggtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagaaagcgacatggtcgtgactca 29350237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 55431408 - 55431312
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| ||||||| || ||  |  ||||   |||||||||||||||||||||||||| ||||||||||    
T  55431408 tgttttatcctggaggcggcgtggttgatagtctgccttgcataatttttgacagtgtcacgaaacgtcttaaagagagcgacctgatcgtgactca 55431312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 3476364 - 3476403
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  3476364 tccaagggtgtgcccttggggtacccacttttgtgaacgg 3476403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 4117122 - 4117161
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4117122 tccaagggtgtgcccttggggtacccacttttgtgaacgg 4117161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 118
Target Start/End: Complemental strand, 54271294 - 54271255
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  54271294 tccaagggtgtgcccttggggtacccacttttgtgaacgg 54271255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 122
Target Start/End: Original strand, 2616931 - 2616996
Alignment:
Q  57 tttatataagggtagagtgacctccaagggtgtgcccttggggtacccacttttgtgaacgggtga 122  Q
    |||||||||| |  ||||| ||| ||| ||||||||||||||||||||||||||| ||||||||||    
T  2616931 tttatataagtgaggagtggcctacaacggtgtgcccttggggtacccacttttgcgaacgggtga 2616996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 21493714 - 21493795
Alignment:
Q  4 agtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagca-tttatataagggtagagtgacctccaag 84  Q
    ||||| |||||||||||||||||||||| |||||||| || |||||| ||  | ||||||||||||| | ||||||||||||    
T  21493714 agtgtttgacttaaaaatgtctcacatttgtgagccaaacaaactagcaactattttatataagggtggggtgacctccaag 21493795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 29715737 - 29715641
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||| ||| ||||||||||| |||||| ||| |||||| || ||  ||||   |||||||||||||| ||||||| ||||||||||||||    
T  29715737 tgttttatcctagaggcggcgtggttgatagtcttcctagcacaattttggacagtgtcacgaaacgtcttaaaaagagcgatctggtcgtgactca 29715641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 795399 - 795446
Alignment:
Q  191 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgca 238  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  795399 ctgggctgttttatcctggaggcggcacggttgttagtctaccttgca 795446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 30338272 - 30338311
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  30338272 tccaagggtgtgcccttggggtacacacttttgtgaacgg 30338311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 30341376 - 30341415
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  30341376 tccaagggtgtgcccttggggtacacacttttgtgaacgg 30341415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 45904442 - 45904544
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtga 288  Q
    ||||||||||||||||||| || |  |  ||||||||||||||||||||||| || ||||||||||| ||   |||||||||| | |||| |||||||||    
T  45904442 tctgggctgttttatcctgaaggca-cacggttgttagtctaccttgcacaatttcgggtagtgctgtgatttgtcttaaagaaaacgacatggtcgtga 45904540  T
Q  289 ctca 292  Q
    ||||    
T  45904541 ctca 45904544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 289
Target Start/End: Original strand, 23074433 - 23074502
Alignment:
Q  221 ttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||| |||||| ||||| |||||||| |||||| |||||||||||||| |||||| ||||| ||||    
T  23074433 ttgttagtataccttacacaaacttgggtattgctgcaaaacgtcttaaagaaagcgacttggtcatgac 23074502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 292
Target Start/End: Complemental strand, 27708924 - 27708875
Alignment:
Q  243 ttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||| |||||  |||||||||||||||||| ||||||||||||||||||    
T  27708924 ttgggcagtgccacgaaacgtcttaaagagaacgacctggtcgtgactca 27708875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 197 - 238
Target Start/End: Complemental strand, 27709029 - 27708988
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgca 238  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
T  27709029 tgttttatcctggaggcggcgtggttgatagtctaccttgca 27708988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 288
Target Start/End: Original strand, 12971633 - 12971725
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtga 288  Q
    ||||||||||| ||| ||||||| ||| || |||  ||||||||| || ||| | |||  ||||||||||||||||||| |||||||||||||    
T  12971633 tgttttatcctagaggcggcgtgattgataatctgtcttgcacaattttgggcaatgccacgaaacgtcttaaagagagagacctggtcgtga 12971725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 23661464 - 23661508
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa 241  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||||    
T  23661464 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaa 23661508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 3481821 - 3481860
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||||||||||||||||||||| |||||| |||||||||    
T  3481821 tccaagggtgtgcccttggggtatccacttctgtgaacgg 3481860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 79 - 118
Target Start/End: Complemental strand, 17358541 - 17358502
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||||||||| |||||||||||| |||||||||||||||    
T  17358541 tccaagggtgtccccttggggtacacacttttgtgaacgg 17358502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 122
Target Start/End: Original strand, 25023431 - 25023470
Alignment:
Q  83 agggtgtgcccttggggtacccacttttgtgaacgggtga 122  Q
    |||||||||||||||| |||||||||||| ||||||||||    
T  25023431 agggtgtgcccttgggatacccacttttgcgaacgggtga 25023470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 45904898 - 45905000
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtga 288  Q
    |||||| ||||||||||||||| |  |  ||||||||||||||| ||||||| || ||||||||||| ||   |||||||||| |||||| ||||||| |    
T  45904898 tctgggttgttttatcctggaggca-cacggttgttagtctaccctgcacaatttcgggtagtgctgtgatttgtcttaaagaaagcgacatggtcgtaa 45904996  T
Q  289 ctca 292  Q
    ||||    
T  45904997 ctca 45905000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 292
Target Start/End: Original strand, 2207769 - 2207803
Alignment:
Q  258 aaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||| ||||||||||||||||||||||    
T  2207769 aaacgtcttaaaaagagcgacctggtcgtgactca 2207803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 292
Target Start/End: Complemental strand, 31002770 - 31002697
Alignment:
Q  219 ggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||||||||||| || ||||||||| | ||   |||||||||| |||||||| |||||||||||    
T  31002770 ggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacct-gtcgtgactca 31002697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 27604588 - 27604633
Alignment:
Q  73 gtgacctccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||||||||||||||| |||||| || |||||||||||| |||||    
T  27604588 gtgacctccaagggtgttcccttgtggcacccacttttgtaaacgg 27604633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 6024171 - 6024127
Alignment:
Q  240 aacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtc 284  Q
    ||||| |||||||| ||||||||||||||| |||| |||||||||    
T  6024171 aacttaggtagtgccgcgaaacgtcttaaaaagagagacctggtc 6024127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 288
Target Start/End: Original strand, 13474707 - 13474771
Alignment:
Q  225 tagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtga 288  Q
    ||||||||||||||||| || |||||||| || | ||||||||||||| | |||| |||||||||    
T  13474707 tagtctaccttgcacaattttgggtagtgttgagtaacgtcttaaagaaaacgacttggtcgtga 13474771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 8e-68; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 130 - 292
Target Start/End: Complemental strand, 5089440 - 5089278
Alignment:
Q  130 tatttagaggtgtatatctcaagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtc 229  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||    
T  5089440 tatttagaggtgtatatctcgagcgattgtatactgtgcagtgtataatcgtaacagtgatttaggctgttttatcctggagacggcgtggttgttagtc 5089341  T
Q  230 taccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||    
T  5089340 taccttgcacaacttggatagtgccgcgaaacgtcttaaagagagcgacctggtcatgactca 5089278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 130 - 292
Target Start/End: Complemental strand, 42914804 - 42914642
Alignment:
Q  130 tatttagaggtgtatatctcaagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtc 229  Q
    |||| ||||||||||||||| |||||||||||| | ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  42914804 tattcagaggtgtatatctcgagcgattgtatactatgcagtgtataatcgtaacagtgatttgggctgttttatcctggagacggcgtggttgttagtc 42914705  T
Q  230 taccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  42914704 taccttgcacaacttaggtagtgccgcgaaacgtcttaaagagaacgacctggtcgtgactca 42914642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 42915292 - 42915164
Alignment:
Q  1 gtgagtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  42915292 gtgagtgtgtgacttaaaaatgtcccacattggtgagccacaccaactagaaagtgtttatataagggtagagtgacctccaagggtgtgcccttggggt 42915193  T
Q  101 acccacttttgtgaacgggtgaacgcttg 129  Q
    |||||||||||||||||||||||||||||    
T  42915192 acccacttttgtgaacgggtgaacgcttg 42915164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 5089792 - 5089680
Alignment:
Q  16 aaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggtacccacttttgtgaa 115  Q
    ||||||||| ||||||||||||||||||||| |||||||  ||||||||||| |||||||||||| |||||||||||||||  |||||||||||||||||    
T  5089792 aaaaatgtcccacattggtgagccacaccaattagaaagtgtttatataaggatagagtgacctctaagggtgtgcccttgatgtacccacttttgtgaa 5089693  T
Q  116 cgggtgaacgctt 128  Q
    |||||||||||||    
T  5089692 cgggtgaacgctt 5089680  T

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Target: chr2; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 42723444 - 42723546
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  |||||||| |||||||||||||||||||||||||||||||||||    
T  42723444 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 42723543  T
Q  290 tca 292  Q
    |||    
T  42723544 tca 42723546  T

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Target: chr2; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 42728613 - 42728715
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  |||||||| |||||||||||||||||||||||||||||||||||    
T  42728613 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 42728712  T
Q  290 tca 292  Q
    |||    
T  42728713 tca 42728715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 44096404 - 44096302
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  |||||||| |||||||||||||||||||||||||||||||||||    
T  44096404 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 44096305  T
Q  290 tca 292  Q
    |||    
T  44096304 tca 44096302  T

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Target: chr2; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 44754589 - 44754691
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  |||||||| |||||||||||||||||||||||||||||||||||    
T  44754589 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 44754688  T
Q  290 tca 292  Q
    |||    
T  44754689 tca 44754691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 44759755 - 44759857
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  |||||||| |||||||||||||||||||||||||||||||||||    
T  44759755 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 44759854  T
Q  290 tca 292  Q
    |||    
T  44759855 tca 44759857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 40518465 - 40518567
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||| | || |||||||| ||||||||||||||||| |||||||||||||||||    
T  40518465 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcactatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 40518564  T
Q  290 tca 292  Q
    |||    
T  40518565 tca 40518567  T

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Target: chr2; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 28751722 - 28751824
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||| | ||||| | |||||||||||||||||| |||||||| ||||||||||| ||||| |||||||||||||||||    
T  28751722 tctgggctgttttatcctggagacggtgcggttgcttgtctaccttgcacaacttaggtagtgccgcgaaacgtctaaaagaaagcgacctggtcgtgac 28751821  T
Q  290 tca 292  Q
    |||    
T  28751822 tca 28751824  T

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Target: chr2; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 192 - 292
Target Start/End: Complemental strand, 40392419 - 40392319
Alignment:
Q  192 tgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactc 291  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| | |   |||||||||||||    
T  40392419 tgggctgttttatcctggagacggcgtggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaaacagtctggtcgtgactc 40392320  T
Q  292 a 292  Q
    |    
T  40392319 a 40392319  T

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Target: chr2; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 10160724 - 10160820
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  10160724 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 10160820  T

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Target: chr2; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 30658358 - 30658262
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgg-gtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || | |||||||  |||||||||||||||||||||||||||||||||||||    
T  30658358 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 30658262  T

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Target: chr2; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 1934993 - 1935089
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  1934993 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 1935089  T

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Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 9180724 - 9180820
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||  |||||  |||||||||||||||||||||||||||||||||||||    
T  9180724 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 9180820  T

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Target: chr2; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 18344526 - 18344430
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||  |||||| |||||||||| || ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  18344526 tgttttatcctggagccggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 18344430  T

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Target: chr2; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 25497325 - 25497421
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||| || ||| |||| | |||||||||||||||||||||||||||||||||||||    
T  25497325 tgttttatcctggaggcggcgtggttgatagtctgacttgcacaaatttgggcagtgttacgaaacgtcttaaagagagcgacctggtcgtgactca 25497421  T

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Target: chr2; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 9189803 - 9189899
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||||  ||||  |||||  |||||||||||||||||||| ||||||||||||||||    
T  9189803 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcaacctggtcgtgactca 9189899  T

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Target: chr2; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 30651024 - 30650928
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||| ||||| ||||||||||| |||||| |||||||||| || ||| |||||  |||||||||||||||||||||| ||||||||||||||    
T  30651024 tgttttatcttggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgatctggtcgtgactca 30650928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 57 - 128
Target Start/End: Complemental strand, 39959846 - 39959775
Alignment:
Q  57 tttatataagggtagagtgacctccaagggtgtgcccttggggtacccacttttgtgaacgggtgaacgctt 128  Q
    ||||||||||||| | |||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||    
T  39959846 tttatataagggtggggtgacctccaagggtgtgtccttggggtacccgcttttgcgaacgggtgaacgctt 39959775  T

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Target: chr2; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 7 - 101
Target Start/End: Original strand, 43111535 - 43111629
Alignment:
Q  7 gtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggta 101  Q
    |||||||||||||||||| || ||| |||||||||||||||||| |||  ||||||||||||| | ||||||| |||||||||| | ||||||||    
T  43111535 gtgtgacttaaaaatgtcccatattagtgagccacaccaactagcaagtgtttatataagggtggggtgacctacaagggtgtgtcattggggta 43111629  T

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Target: chr2; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 12797020 - 12796924
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||||||||||||||| ||||||  |||| |||| || ||| |||||  | |||||||||||||||||||| ||||||||||||||    
T  12797020 tgttttatcctggagacggcgtggttgatagtctgtcttgaacaattttgggcagtgccacaaaacgtcttaaagagagcgatctggtcgtgactca 12796924  T

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Target: chr2; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 25478297 - 25478393
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||| |||||| ||||||||||| |||||| |||||||||| || ||| ||||   |||||||||||||||||||||||||||| ||||||||    
T  25478297 tgttttattctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacctggttgtgactca 25478393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 31326834 - 31326738
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||||||  |||||||||| |||||| |||||||||| || ||| ||||    ||||||||||||||||||||||||||||||||||||    
T  31326834 tgttttatcctggaggtggcgtggttgatagtctgccttgcacaattttgggcagtggcatgaaacgtcttaaagagagcgacctggtcgtgactca 31326738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 199 - 292
Target Start/End: Complemental strand, 29677474 - 29677380
Alignment:
Q  199 ttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||| ||||||||||| |||||| | |||||||| || ||| |||||  ||||||||||||||||||||||| || ||||||||||    
T  29677474 ttttatcctggaggcggcgtggttgatagtctgctttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatgatcgtgactca 29677380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 7737851 - 7737947
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| ||||||  |||||||||  ||||| |||||  | |||| |||||||||||||||| |||||||||||||    
T  7737851 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacaaaacttcttaaagagagcgacatggtcgtgactca 7737947  T

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Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 19892466 - 19892562
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| ||||||   |||||||| || ||  |||||   ||||||||||||||||||||||||||||||||||||    
T  19892466 tgttttatcctggaggcggcgtggttgatagtctgtgttgcacaattttggacagtgccaggaaacgtcttaaagagagcgacctggtcgtgactca 19892562  T

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Target: chr2; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 201 - 292
Target Start/End: Original strand, 42926763 - 42926857
Alignment:
Q  201 ttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaac--gtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||| ||||||||||| |||||||||||||||||  ||||| |||||  ||||||  ||||||||||||||| |||| ||||||||||    
T  42926763 ttatcctggaggcggcgtggttgatagtctaccttgcacaattttgggcagtgccacgaaacgtgtcttaaagagagcggcctgatcgtgactca 42926857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 292
Target Start/End: Complemental strand, 19538458 - 19538385
Alignment:
Q  220 gttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||||||||||||| || || |||||| | |||| |||||||||| ||||||||||||||||||||    
T  19538458 gttgttagtctaccttgcacaaactcggatagtgccgtgaaatgtcttaaagaaagcgacctggtcgtgactca 19538385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 19578414 - 19578510
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-ggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||| ||||||| | || |||||| |||||| |||||||||| ||  ||||||||  | |||||||||||||||||||| ||||||||||||||    
T  19578414 tgttttaccctggaggcagcatggttgatagtcttccttgcacaattttaggtagtgccacaaaacgtcttaaagagagcgatctggtcgtgactca 19578510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 288
Target Start/End: Complemental strand, 35602017 - 35601925
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgctgcgaaacgtcttaaagagagcgacctggtcgtga 288  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||  |||||  |||||||||||||| ||||||||||||||||||    
T  35602017 tgttttatcctggaggcggcgtggttgatactctgtcttgcacaattttggacagtgccacgaaacgtcttaaaaagagcgacctggtcgtga 35601925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 219 - 292
Target Start/End: Original strand, 6297907 - 6297981
Alignment:
Q  219 ggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||||||||||| || ||||||||| | ||   |||||||||| ||||||||||||||||||||    
T  6297907 ggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactca 6297981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 191 - 292
Target Start/End: Original strand, 11658882 - 11658984
Alignment:
Q  191 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||| |||||||||| ||||| ||| |  |||||||||||||||||||||| || | ||||||| | |||| |||||||||| |||||| ||||| ||||    
T  11658882 ctggactgttttatcatggaggcggtgcagttgttagtctaccttgcacaaattcgagtagtgccgtgaaatgtcttaaagaaagcgacttggtcatgac 11658981  T
Q  290 tca 292  Q
    |||    
T  11658982 tca 11658984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 292
Target Start/End: Complemental strand, 160137 - 160040
Alignment:
Q  196 ctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||  |||| || || ||||| ||| ||||||||||||| || ||||||||  | ||||||| ||||||||||||||||||||||| ||||    
T  160137 ctgttttatctcggaggcgacgcggttgatagcctaccttgcacaattttgggtagtgtcgtgaaacgtattaaagagagcgacctggtcgtgtctca 160040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 292
Target Start/End: Complemental strand, 28855077 - 28855004
Alignment:
Q  220 gttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||||| |||| ||||| |||||| | ||||||||||||||| ||||||| ||| ||||||||    
T  28855077 gttgttagtctaccttgtacaaacttggatagtgccgtgaaacgtcttaaagaaagcgaccgggttgtgactca 28855004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 288
Target Start/End: Original strand, 35638997 - 35639089
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtga 288  Q
    ||||||||||||||| ||||||||||| ||  ||  ||||||||| || ||| |||||  |||||||||||||| ||||||||||| ||||||    
T  35638997 tgttttatcctggaggcggcgtggttgatacgctgtcttgcacaattttgggcagtgccacgaaacgtcttaaaaagagcgacctgatcgtga 35639089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 28945266 - 28945191
Alignment:
Q  195 gctgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgctgcgaaacgtcttaaa 269  Q
    ||||||||||||||||| |  || |||||||||| |||||||||| |||| | ||||||| |||||||||||||||    
T  28945266 gctgttttatcctggaggcaacgcggttgttagtataccttgcacaaactcgtgtagtgccgcgaaacgtcttaaa 28945191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 191 - 292
Target Start/End: Complemental strand, 39543004 - 39542901
Alignment:
Q  191 ctgggctgttttatcctggagacggcgtggttgttagtct-accttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtga 288  Q
    ||||||| ||||||||||||| |   | |||||||||||| ||||| ||||| ||   ||||||| | ||||||||||||||||||||||||| ||||||    
T  39543004 ctgggctattttatcctggaggcaatgcggttgttagtcttaccttacacaaactcatgtagtgccgtgaaacgtcttaaagagagcgacctgatcgtga 39542905  T
Q  289 ctca 292  Q
    ||||    
T  39542904 ctca 39542901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 292
Target Start/End: Original strand, 21523736 - 21523815
Alignment:
Q  213 cggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||| |||||| ||||||||||  ||||| |||||  |||||||| ||||||| ||| ||||||||||||||||    
T  21523736 cggcgtggttgatagtctcccttgcacaattttgggcagtgccacgaaacgt-ttaaagatagcaacctggtcgtgactca 21523815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 28603333 - 28603297
Alignment:
Q  256 cgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||| ||||||||||||||||||||||||||||    
T  28603333 cgaaacgttttaaagagagcgacctggtcgtgactca 28603297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 292
Target Start/End: Original strand, 39542509 - 39542601
Alignment:
Q  201 ttatcctggagacggcgtggttgttagtctaccttgcacaacttgg-gtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||| | |||  |||||||||||||||| ||||| ||   |||||| || |||||||||||||||||| ||| | |||||||||||    
T  39542509 ttatcctggaggcagcgcagttgttagtctaccttacacaaattcaagtagtgttgtgaaacgtcttaaagagagtgacttagtcgtgactca 39542601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 290
Target Start/End: Original strand, 29907368 - 29907458
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgact 290  Q
    ||||||||||||||| |||||| |||| |||   ||||| ||||| ||   |||||  ||||||||||||||| ||| ||||||||||||||||    
T  29907368 tgttttatcctggaggcggcgtagttgatag---accttacacaattttaatagtgtcgcgaaacgtcttaaaaagatcgacctggtcgtgact 29907458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 292
Target Start/End: Complemental strand, 29677860 - 29677766
Alignment:
Q  199 ttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-ggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||| || |||| |||||| |||| | |||||||||| ||  || |||||  | ||| ||||||| |||||||||||||||||||||||    
T  29677860 ttttatcctgtaggcggcttggttgatagtttgccttgcacaatttttggcagtgccactaaatgtcttaatgagagcgacctggtcgtgactca 29677766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 40033794 - 40033860
Alignment:
Q  225 tagtctaccttgcacaac-ttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgact 290  Q
    |||||||||||||||||| |||| |||||||| ||||| ||||||||||| |||  | |||||||||    
T  40033794 tagtctaccttgcacaactttggatagtgctgtgaaacatcttaaagagaacgatttagtcgtgact 40033860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 122; Significance: 2e-62; HSPs: 5)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 130 - 290
Target Start/End: Complemental strand, 1728 - 1567
Alignment:
Q  130 tatttagaggtgtatatctca-agcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagt 228  Q
    ||||| |||||||||||||   |||||||||||| |||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  1728 tatttcgaggtgtatatctatgagcgattgtatactgtgaagtatataatcgtaacagtgatctgggctgttttatcctggagacggcgtggttgttagt 1629  T
Q  229 ctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgact 290  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1628 ctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgact 1567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 130 - 292
Target Start/End: Complemental strand, 7209 - 7046
Alignment:
Q  130 tatttagaggtgtatatct-caagcgattgtatattgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagt 228  Q
    ||||| ||||||||||||| | | |||||||||| |||| ||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  7209 tatttcgaggtgtatatctacgaacgattgtatactgtgtagtatataatcgtaacagtgatctgagctgttttatcctggagacggcgtggttgttagt 7110  T
Q  229 ctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||    
T  7109 ctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagaacgacctggtcgtaactca 7046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 2356 - 2228
Alignment:
Q  1 gtgagtgtgtgacttaaaaa-tgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttgggg 99  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||  ||||||||||||||  |||||||||||||||||||||||||||    
T  2356 gtgagtgtgtgacttaaaaaatgtcccacattggtgagccacaccaactagaaagtgtttatataagggtattgtgacctccaagggtgtgcccttgggg 2257  T
Q  100 tacccacttttgtgaacgggtgaacgctt 128  Q
    ||||||||||||||||||| |||||||||    
T  2256 tacccacttttgtgaacggatgaacgctt 2228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 7610 - 7501
Alignment:
Q  1 gtgagtgtgtgacttaaaaa-tgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttgggg 99  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||    
T  7610 gtgagtgtgtgacttaaaaaatgtcccacattggtgagccacaccaactagaaagtgtttatataagggtagtgtgacctccaagggtgtgcccttgggg 7511  T
Q  100 tacccacttt 109  Q
    ||||||||||    
T  7510 tacccacttt 7501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 155555 - 155587
Alignment:
Q  256 cgaaacgtcttaaagagagcgacctggtcgtga 288  Q
    |||||||||||||||||| ||||||||||||||    
T  155555 cgaaacgtcttaaagagaacgacctggtcgtga 155587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 83; Significance: 3e-39; HSPs: 4)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 13733 - 13835
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  13733 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 13832  T
Q  290 tca 292  Q
    |||    
T  13833 tca 13835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 19188 - 19293
Alignment:
Q  190 tctgggctgttttatcctggagacggcgt---ggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgt 286  Q
    ||||||||||||||||||||||||||||    ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||| |||||||    
T  19188 tctgggctgttttatcctggagacggcgccgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacatggtcgt 19287  T
Q  287 gactca 292  Q
    ||||||    
T  19288 gactca 19293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 13158 - 13197
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13158 tccaagggtgtgcccttggggtacccacttttgtgaacgg 13197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 18615 - 18654
Alignment:
Q  79 tccaagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  18615 tccaagggtgtgcccttggggtacccacttttgttaacgg 18654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 31647 - 31545
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  31647 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 31548  T
Q  290 tca 292  Q
    |||    
T  31547 tca 31545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 192 - 292
Target Start/End: Complemental strand, 26473 - 26373
Alignment:
Q  192 tgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactc 291  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||| |  |||||||| |||||||||||||||||||||||| || |||| ||||    
T  26473 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacttgatcgtaactc 26374  T
Q  292 a 292  Q
    |    
T  26373 a 26373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 79; Significance: 8e-37; HSPs: 2)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 9201 - 9303
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| |||||| ||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  9201 tctgggctgttttatcctggagacggcgcggttgctagtcttccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 9300  T
Q  290 tca 292  Q
    |||    
T  9301 tca 9303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 118
Target Start/End: Original strand, 8708 - 8745
Alignment:
Q  81 caagggtgtgcccttggggtacccacttttgtgaacgg 118  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8708 caagggtgtgcccttggggtacccacttttgtgaacgg 8745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 3665 - 3563
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    ||||||||||||||||||||| |||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  3665 tctgggctgttttatcctggaaacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 3566  T
Q  290 tca 292  Q
    |||    
T  3565 tca 3563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 79; Significance: 8e-37; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 37112 - 37010
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||||| ||||||||||||||||| |||||||||||||||||    
T  37112 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 37013  T
Q  290 tca 292  Q
    |||    
T  37012 tca 37010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 118
Target Start/End: Complemental strand, 37623 - 37591
Alignment:
Q  86 gtgtgcccttggggtacccacttttgtgaacgg 118  Q
    |||||||||||||||||||||||||||||||||    
T  37623 gtgtgcccttggggtacccacttttgtgaacgg 37591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 3160 - 3058
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  |||||||| |||||||||||||||||||||||||||||||||||    
T  3160 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 3061  T
Q  290 tca 292  Q
    |||    
T  3060 tca 3058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 81375 - 81477
Alignment:
Q  190 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |  |||||||| |||||||||||||||||||||||||||||||||||    
T  81375 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgac 81474  T
Q  290 tca 292  Q
    |||    
T  81475 tca 81477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 76; Significance: 5e-35; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 33367 - 33490
Alignment:
Q  5 gtgtgtgacttaaaaatgtctcacattggtgagccacaccaactagaaagcatttatataagggtagagtgacctccaagggtgtgcccttggggtaccc 104  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||| |||  |||||||||| || | |||| ||||||||||||||| ||||| |||||    
T  33367 gtgtgtgacttaaaaatgtcccacattgatgagccacaccaactagcaagtgtttatataagagtggggtgagctccaagggtgtgccattgggataccc 33466  T
Q  105 acttttgtgaacgggtgaacgctt 128  Q
    |||||||||||||||||| |||||    
T  33467 acttttgtgaacgggtgagcgctt 33490  T

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Target: scaffold0067; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 33968 - 34064
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||| ||  || | |||||||| ||||||||| |||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  33968 tgttttatcctgaaggaggagcggttgttattctaccttgtacaaactttggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 34064  T

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Target: scaffold0352 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 7199 - 7103
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  7199 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 7103  T

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Target: scaffold0182 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 9887 - 9983
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  9887 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 9983  T

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Target: scaffold0002 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 4169 - 4073
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| || ||| |||||  ||||| |||||||||||||||||||||||||||||||    
T  4169 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcgtgactca 4073  T

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Target: scaffold0002; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 264
Target Start/End: Original strand, 443945 - 444011
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtc 264  Q
    |||||||||||| |||||||||||||| |||||| |||||||||| || || |||||  |||||||||    
T  443945 tgttttatcctg-agacggcgtggttgatagtctgccttgcacaattttggcagtgccacgaaacgtc 444011  T

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Target: scaffold0045 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 83161 - 83065
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| |||| |||||| |||||| ||||||| || || |||| |||   |||||||||||||||||||||||||||||||||||||    
T  83161 tgttttatcctggaggcggcatggttgatagtctgccttgcataattttgggtggtgtcacgaaacgtcttaaagagagcgacctggtcgtgactca 83065  T

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Target: scaffold0012 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 166086 - 166182
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-ggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||| ||||||||||| |||| |  ||||||||| ||  || |||||  |||||||||||||||||||||||||||| ||||||||    
T  166086 tgttttatcctggaggcggcgtggttgatagtatgtcttgcacaatttttggcagtgccacgaaacgtcttaaagagagcgacctggttgtgactca 166182  T

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Target: scaffold0057 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 197 - 286
Target Start/End: Complemental strand, 35729 - 35639
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaa-cttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgt 286  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||||  ||||  ||||   ||||||||||||||||||||| | |||||||    
T  35729 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggccagtgtcacgaaacgtcttaaagagagcggcatggtcgt 35639  T

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Target: scaffold0020 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 219 - 292
Target Start/End: Original strand, 1247 - 1321
Alignment:
Q  219 ggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    ||||||||||||||||||||||| || ||||||||| | ||   |||||||||| ||||||||||||||||||||    
T  1247 ggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactca 1321  T

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Target: scaffold0008 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 197 - 287
Target Start/End: Complemental strand, 255912 - 255821
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtg 287  Q
    ||||||||||||||| |||| | |||| |||| |  ||||||||| || |||||||||  |||||| |||||||||||| ||||||||||||    
T  255912 tgttttatcctggaggcggcatagttgatagtatgtcttgcacaattttgggtagtgccacgaaacctcttaaagagagtgacctggtcgtg 255821  T

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Target: scaffold0061 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 292
Target Start/End: Complemental strand, 45885 - 45784
Alignment:
Q  191 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    ||||||||||||||||||||| |  |  ||||||||||||||||||||||| || ||||||||| | ||   || ||||||| ||||||||||| |||||    
T  45885 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgttttaaagaaagcgacctggttgtgac 45787  T
Q  290 tca 292  Q
    |||    
T  45786 tca 45784  T

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Target: scaffold0017 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 292
Target Start/End: Original strand, 152902 - 153003
Alignment:
Q  191 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgac 289  Q
    ||||||||||||||||||||| |  |  ||||||||||||||||||||||| || ||||||||| | ||   || ||||||| ||||||||||| |||||    
T  152902 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgttttaaagaaagcgacctggttgtgac 153000  T
Q  290 tca 292  Q
    |||    
T  153001 tca 153003  T

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Target: scaffold0027 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 43199 - 43124
Alignment:
Q  197 tgttttatcctggagacggcgtggttgttagtctaccttgcac-aacttgggtagtgctgcgaaacgtcttaaaga 271  Q
    ||||||||||| ||||||||  |||||||| | ||| |||||| ||||||||||||||| |||||  |||||||||    
T  43199 tgttttatcctagagacggcacggttgttaatttacattgcacaaacttgggtagtgctacgaaaattcttaaaga 43124  T

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Target: scaffold0041 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 292
Target Start/End: Original strand, 35676 - 35750
Alignment:
Q  218 tggttgttagtctaccttgcacaacttgggtagtgctgcgaaacgtcttaaagagagcgacctggtcgtgactca 292  Q
    |||||||||||||||||||||||| || | ||||||||  |   |||||||||| |||| |||| ||||||||||    
T  35676 tggttgttagtctaccttgcacaatttcgatagtgctgtcatttgtcttaaagaaagcgccctgatcgtgactca 35750  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 280
Target Start/End: Original strand, 171711 - 171798
Alignment:
Q  192 tgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttg-ggtagtgctgcgaaacgtcttaaagagagcgacct 280  Q
    |||||||||||||||| | |||| |||||||| |||||| | |||||||| ||  || |||||  |||||||||||||||||||||||||    
T  171711 tgggctgttttatcctag-gacgtcgtggttgatagtctgc-ttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacct 171798  T

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