View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2815_high_8 (Length: 358)
Name: NF2815_high_8
Description: NF2815
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2815_high_8 |
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Alignment Details
Target: chr6 (Bit Score: 309; Significance: 1e-174; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 1 - 345
Target Start/End: Original strand, 14736228 - 14736572
Alignment:
| Q |
1 |
tattcaagtggtagtgtcctaagacagagttgtacaaataagtggattaaggaacttactaacaaatgccaaatgtattggcgtgtttggttttgttttt |
100 |
Q |
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| T |
14736228 |
tattcaagtgttagtgacctaagacagagttgtacaaataagtggattaaggaacttactaacaaatgtcagatgtattggcgtgtttggttttgttttt |
14736327 |
T |
|
| Q |
101 |
ctccatctccgaggtgtatgagccaccacataaatcataaccaaggaaatgtgttatggaaattattcagcttgaggaattgaagattttctgattttgg |
200 |
Q |
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| T |
14736328 |
ctctatctccgaggtgtatgagccaccacacaaatcataaccaagaaaatgtgttatggaaattattcagcttgaggaattgaagattttctgattttgg |
14736427 |
T |
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| Q |
201 |
aaaagcacccatttatctatcaacccaagttagatatttttgaatgctatgtcgtcaagaccaagattaggaacgtcatttaagaatattcaccgaaatt |
300 |
Q |
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| T |
14736428 |
aaaagcactcatttatctatcaacccaagttagatatttttgaatgatatgtcgtcaagaccaagattaggaacgtcatttaagaatattcaccgaaatt |
14736527 |
T |
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| Q |
301 |
tgaatatctctctaaagacttgaggaaagatatgaatgacacagg |
345 |
Q |
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| T |
14736528 |
tgaatatctctctaaagacttgaggaaagatatgaatgacacagg |
14736572 |
T |
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