View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2815_low_23 (Length: 237)
Name: NF2815_low_23
Description: NF2815
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2815_low_23 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 16 - 237
Target Start/End: Complemental strand, 6583740 - 6583519
Alignment:
| Q |
16 |
cacaatttaaatttgaaacaattttccaataatccattttcataagacacgtaaatccttgactctagtttcttgaacaaaattgacataaatattctga |
115 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6583740 |
cacaatttaaatttgaaacaattttccaataatccattttcataagacacattaatccttgactctagtttcttgaacaaaattgacataaatattctgg |
6583641 |
T |
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| Q |
116 |
atccggctaccatgcactaccatggagggatttccgacatttacaagtcgccacatcgtgaccattcaatgatcaagatcgaccagtttatattcaaact |
215 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||| |
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| T |
6583640 |
atccggctaccatgcactaccatgcagggatttccgacatttacaagtcgccacatcgtgaccattcgatgatcaagattgaccggtttatattcaaact |
6583541 |
T |
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| Q |
216 |
tggtattttgaattataaaact |
237 |
Q |
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|||||||||||| ||||||||| |
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| T |
6583540 |
tggtattttgaaatataaaact |
6583519 |
T |
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