View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2815_low_4 (Length: 518)
Name: NF2815_low_4
Description: NF2815
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2815_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 477; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 477; E-Value: 0
Query Start/End: Original strand, 18 - 510
Target Start/End: Original strand, 36536302 - 36536794
Alignment:
| Q |
18 |
ataggaaaactcagctccaatatcatcttcaggaagccaagcaacaactccaccaacactatgtatcattttatctgtagccataagaacttcatttttc |
117 |
Q |
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| T |
36536302 |
ataggaaaactcagctccaacatcatcttcaggaagccaagcaacaactccaccaacactatgtatcattttatctgtagccataagaacttcatttttc |
36536401 |
T |
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| Q |
118 |
cagacaccaacaggacgctctaaactcgtaaacataccaagagtttgcaccttcatccaacactcaacaccttcatattcatcagacaaaatccacaaat |
217 |
Q |
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| T |
36536402 |
cagacaccaacaggacgctctaaactcgtaaacataccaagagtttgcaccttcatccaacactcaacaccttcatattcatcagacaaaatccacaaat |
36536501 |
T |
|
| Q |
218 |
ctaaccattgttccatacttttactttttaaacaagtaatcaatgaaacagaatccttataaattacaagtttcttataaacttcatcacagtctttaaa |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36536502 |
ctaaccattgttccatacttttactttttaaacaagtaatcaatgaaacagaatccttataaattacaagtttcttataaacttcatcacagtctttaaa |
36536601 |
T |
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| Q |
318 |
agaattaatcggcaactcaatcttgctaataacattgtcaattgaattaaaagagataatcacttcatgactaaccttttcagttacctccatagcaatc |
417 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36536602 |
aggattaatcggcaactcaatcttgctaataacattgtcaattgaattaaaagagataatcacttcatgactaaccttttcagttacctccatagcaatc |
36536701 |
T |
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| Q |
418 |
caaaacaaggttccttccattgtcacattgttctcagtccaaaacaaatgtcccttcaaaatcaaattttgatcacaacccttcatctctctc |
510 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |
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| T |
36536702 |
caaaacaaggttccttccattgtcacattgttctcagtccaaaacaaatgtcccttcaaaatcaaattttgatcacaaccctttatttctctc |
36536794 |
T |
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