View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2816_high_8 (Length: 457)

Name: NF2816_high_8
Description: NF2816
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2816_high_8
NF2816_high_8
[»] chr4 (93 HSPs)
chr4 (1-442)||(14983874-14984315)
chr4 (347-442)||(30690176-30690271)
chr4 (346-442)||(20639657-20639754)
chr4 (346-442)||(25629089-25629185)
chr4 (346-441)||(5648299-5648394)
chr4 (346-442)||(23501827-23501925)
chr4 (348-441)||(6430627-6430720)
chr4 (347-440)||(20225024-20225117)
chr4 (363-441)||(7909296-7909375)
chr4 (349-440)||(29207900-29207991)
chr4 (346-441)||(30639420-30639515)
chr4 (344-435)||(16911609-16911702)
chr4 (346-435)||(5306659-5306752)
chr4 (193-253)||(7246316-7246376)
chr4 (346-410)||(30352579-30352643)
chr4 (346-442)||(47443997-47444093)
chr4 (366-442)||(51865057-51865133)
chr4 (363-442)||(37494891-37494970)
chr4 (347-410)||(44363130-44363193)
chr4 (346-440)||(9832312-9832406)
chr4 (363-442)||(20405127-20405208)
chr4 (346-404)||(36816383-36816441)
chr4 (347-409)||(38755908-38755970)
chr4 (363-433)||(40915877-40915947)
chr4 (346-440)||(47528529-47528623)
chr4 (346-440)||(48598824-48598918)
chr4 (363-442)||(54730290-54730371)
chr4 (346-442)||(20908635-20908732)
chr4 (368-433)||(49796846-49796911)
chr4 (370-442)||(7385499-7385571)
chr4 (346-442)||(35567210-35567306)
chr4 (346-418)||(38786673-38786745)
chr4 (347-410)||(11394924-11394987)
chr4 (347-410)||(11404651-11404714)
chr4 (347-435)||(20225121-20225211)
chr4 (367-430)||(25463174-25463237)
chr4 (346-409)||(33836486-33836549)
chr4 (346-397)||(35532077-35532128)
chr4 (342-397)||(40553932-40553987)
chr4 (346-440)||(11054147-11054241)
chr4 (346-404)||(32484311-32484369)
chr4 (207-253)||(41083113-41083159)
chr4 (348-435)||(8473621-8473710)
chr4 (346-441)||(54175104-54175201)
chr4 (366-438)||(9987853-9987925)
chr4 (193-253)||(25056188-25056248)
chr4 (193-253)||(41083346-41083406)
chr4 (363-435)||(55766482-55766554)
chr4 (347-435)||(55830721-55830809)
chr4 (346-442)||(16408600-16408698)
chr4 (363-442)||(19027888-19027967)
chr4 (350-442)||(21647004-21647098)
chr4 (363-434)||(30496338-30496409)
chr4 (367-418)||(32478811-32478862)
chr4 (206-253)||(41083052-41083099)
chr4 (367-410)||(47482870-47482913)
chr4 (367-442)||(54967061-54967135)
chr4 (207-253)||(7246051-7246097)
chr4 (347-409)||(25388249-25388311)
chr4 (346-440)||(39077795-39077889)
chr4 (207-253)||(45038408-45038454)
chr4 (208-253)||(26782353-26782398)
chr4 (193-253)||(17231973-17232033)
chr4 (193-253)||(26782525-26782585)
chr4 (363-442)||(30581481-30581561)
chr4 (193-253)||(45038174-45038234)
chr4 (193-253)||(45787008-45787068)
chr4 (209-253)||(55617583-55617627)
chr4 (209-253)||(55624887-55624931)
chr4 (346-442)||(13256398-13256496)
chr4 (367-410)||(21489160-21489203)
chr4 (206-253)||(24684337-24684384)
chr4 (211-254)||(41083285-41083328)
chr4 (206-253)||(41519445-41519492)
chr4 (365-404)||(44718645-44718684)
chr4 (193-240)||(51950784-51950831)
chr4 (207-253)||(2470140-2470186)
chr4 (211-253)||(9999522-9999564)
chr4 (348-442)||(12711450-12711544)
chr4 (346-404)||(19027989-19028047)
chr4 (207-253)||(21322062-21322108)
chr4 (358-396)||(37038134-37038172)
chr4 (365-442)||(39029078-39029156)
chr4 (207-253)||(40395158-40395204)
chr4 (207-253)||(46196169-46196215)
chr4 (208-253)||(45038468-45038513)
chr4 (193-253)||(2470200-2470260)
chr4 (367-419)||(3580860-3580912)
chr4 (193-253)||(7245977-7246037)
chr4 (207-251)||(12592424-12592468)
chr4 (359-440)||(16494259-16494342)
chr4 (367-435)||(47441550-47441618)
chr4 (193-253)||(53863611-53863671)
[»] scaffold0057 (4 HSPs)
scaffold0057 (346-442)||(46871-46967)
scaffold0057 (346-442)||(24771-24867)
scaffold0057 (344-433)||(43706-43796)
scaffold0057 (366-435)||(46726-46796)
[»] chr8 (58 HSPs)
chr8 (346-442)||(35261719-35261815)
chr8 (343-442)||(36720836-36720935)
chr8 (344-442)||(44530189-44530287)
chr8 (345-442)||(12625930-12626027)
chr8 (349-442)||(29877134-29877227)
chr8 (346-442)||(8897763-8897859)
chr8 (346-442)||(28817625-28817721)
chr8 (363-441)||(13160742-13160820)
chr8 (348-441)||(45071305-45071398)
chr8 (363-442)||(389685-389764)
chr8 (347-442)||(2626562-2626657)
chr8 (346-441)||(18164759-18164854)
chr8 (346-440)||(12670249-12670343)
chr8 (344-442)||(39460991-39461091)
chr8 (367-442)||(5135309-5135384)
chr8 (192-251)||(24827341-24827400)
chr8 (346-421)||(26102578-26102653)
chr8 (363-442)||(29521701-29521780)
chr8 (346-433)||(30454096-30454183)
chr8 (363-442)||(20284085-20284166)
chr8 (363-442)||(21070713-21070794)
chr8 (346-442)||(10857869-10857965)
chr8 (367-435)||(24365079-24365147)
chr8 (193-253)||(41151390-41151450)
chr8 (346-442)||(20869963-20870061)
chr8 (342-440)||(19729382-19729480)
chr8 (346-396)||(27468091-27468141)
chr8 (365-442)||(8483956-8484033)
chr8 (345-442)||(40604904-40605000)
chr8 (363-435)||(5689678-5689750)
chr8 (346-435)||(7136526-7136617)
chr8 (346-442)||(6760862-6760960)
chr8 (346-442)||(25250562-25250660)
chr8 (347-410)||(28407475-28407538)
chr8 (363-404)||(27507988-27508029)
chr8 (344-441)||(31457213-31457310)
chr8 (346-411)||(35107310-35107375)
chr8 (193-253)||(6220168-6220228)
chr8 (206-250)||(9399814-9399858)
chr8 (193-253)||(9400119-9400179)
chr8 (345-442)||(26954173-26954272)
chr8 (205-253)||(27052405-27052453)
chr8 (346-426)||(16013510-16013592)
chr8 (347-418)||(17823640-17823711)
chr8 (363-410)||(18595910-18595957)
chr8 (206-253)||(24909696-24909743)
chr8 (194-249)||(42667432-42667487)
chr8 (363-410)||(44781520-44781567)
chr8 (207-253)||(6220475-6220521)
chr8 (363-442)||(16225059-16225140)
chr8 (366-404)||(24245527-24245565)
chr8 (207-253)||(24827416-24827462)
chr8 (207-253)||(27052626-27052672)
chr8 (204-253)||(27127874-27127922)
chr8 (200-253)||(27128168-27128220)
chr8 (363-438)||(26457773-26457846)
chr8 (402-438)||(28873242-28873278)
chr8 (347-391)||(30962771-30962815)
[»] chr5 (60 HSPs)
chr5 (346-442)||(24448930-24449026)
chr5 (347-441)||(7097760-7097854)
chr5 (345-421)||(16957375-16957451)
chr5 (345-442)||(38879621-38879720)
chr5 (345-440)||(32703464-32703559)
chr5 (345-441)||(41014359-41014455)
chr5 (365-440)||(43574648-43574723)
chr5 (346-440)||(8169983-8170077)
chr5 (348-442)||(12006329-12006425)
chr5 (347-435)||(34154814-34154902)
chr5 (363-442)||(16880663-16880742)
chr5 (346-442)||(43334243-43334340)
chr5 (343-442)||(4619100-4619201)
chr5 (363-441)||(19142959-19143037)
chr5 (346-440)||(35710353-35710447)
chr5 (189-253)||(28559216-28559280)
chr5 (358-442)||(31694119-31694203)
chr5 (370-441)||(2838819-2838890)
chr5 (366-442)||(27328792-27328870)
chr5 (363-441)||(5873338-5873416)
chr5 (350-440)||(7368438-7368528)
chr5 (347-442)||(13801767-13801864)
chr5 (363-409)||(25622533-25622579)
chr5 (366-410)||(10306493-10306537)
chr5 (193-249)||(10827402-10827458)
chr5 (193-253)||(17400839-17400899)
chr5 (367-435)||(22600501-22600569)
chr5 (345-397)||(32354212-32354264)
chr5 (193-253)||(35461421-35461481)
chr5 (364-442)||(1405227-1405305)
chr5 (346-404)||(16028623-16028681)
chr5 (207-253)||(16327157-16327203)
chr5 (207-253)||(25456334-25456380)
chr5 (345-442)||(3771379-3771476)
chr5 (346-442)||(28516432-28516529)
chr5 (342-435)||(30006372-30006464)
chr5 (193-253)||(16327083-16327143)
chr5 (207-251)||(19550312-19550356)
chr5 (350-410)||(21784335-21784395)
chr5 (193-253)||(35461728-35461788)
chr5 (206-253)||(19550359-19550406)
chr5 (345-404)||(39801594-39801653)
chr5 (207-253)||(12713119-12713165)
chr5 (207-253)||(12774383-12774429)
chr5 (363-397)||(13774950-13774984)
chr5 (207-253)||(16327331-16327377)
chr5 (203-245)||(28559536-28559578)
chr5 (345-442)||(29334435-29334533)
chr5 (185-246)||(6588140-6588200)
chr5 (367-427)||(12575680-12575741)
chr5 (348-442)||(20135644-20135740)
chr5 (369-410)||(21542489-21542530)
chr5 (347-404)||(30877564-30877621)
chr5 (363-442)||(42924846-42924929)
chr5 (347-431)||(1565483-1565566)
chr5 (344-420)||(22861666-22861742)
chr5 (209-253)||(23662171-23662215)
chr5 (209-253)||(23796373-23796417)
chr5 (348-404)||(29184062-29184118)
chr5 (193-253)||(32361153-32361213)
[»] chr3 (76 HSPs)
chr3 (346-442)||(40272811-40272907)
chr3 (346-442)||(54484753-54484849)
chr3 (347-440)||(31592911-31593004)
chr3 (347-440)||(39203578-39203671)
chr3 (366-442)||(8247706-8247784)
chr3 (363-442)||(45948854-45948933)
chr3 (363-441)||(6411838-6411916)
chr3 (344-435)||(13628787-13628880)
chr3 (346-432)||(52926218-52926304)
chr3 (348-441)||(22609828-22609921)
chr3 (346-441)||(26869769-26869864)
chr3 (346-440)||(1217152-1217246)
chr3 (346-440)||(15797284-15797378)
chr3 (346-440)||(34771363-34771457)
chr3 (344-441)||(16735503-16735600)
chr3 (349-442)||(26573189-26573282)
chr3 (348-440)||(22122918-22123010)
chr3 (345-421)||(25517168-25517244)
chr3 (345-442)||(29366718-29366817)
chr3 (347-435)||(10795423-10795513)
chr3 (366-442)||(46421054-46421132)
chr3 (364-442)||(54374362-54374441)
chr3 (347-442)||(45786214-45786311)
chr3 (349-442)||(353351-353446)
chr3 (346-442)||(13730601-13730699)
chr3 (346-442)||(49013472-49013570)
chr3 (360-410)||(10300585-10300635)
chr3 (344-402)||(10484613-10484671)
chr3 (346-403)||(516513-516570)
chr3 (346-432)||(5173718-5173806)
chr3 (345-442)||(12914033-12914130)
chr3 (346-395)||(47624208-47624257)
chr3 (346-442)||(53996564-53996661)
chr3 (366-442)||(9276326-9276401)
chr3 (346-410)||(24851300-24851364)
chr3 (344-404)||(30452895-30452955)
chr3 (363-442)||(34420659-34420739)
chr3 (193-253)||(39541461-39541521)
chr3 (193-253)||(47573680-47573740)
chr3 (346-421)||(24578008-24578083)
chr3 (194-253)||(26976528-26976587)
chr3 (194-253)||(28814090-28814149)
chr3 (206-253)||(47069526-47069573)
chr3 (378-441)||(47624104-47624167)
chr3 (363-432)||(829458-829528)
chr3 (363-442)||(14987019-14987100)
chr3 (207-253)||(32186705-32186751)
chr3 (207-253)||(40286479-40286525)
chr3 (207-253)||(50332725-50332771)
chr3 (208-253)||(13903036-13903081)
chr3 (363-423)||(43114884-43114944)
chr3 (345-390)||(54032569-54032614)
chr3 (346-390)||(4495675-4495719)
chr3 (346-410)||(25944564-25944628)
chr3 (193-253)||(32186448-32186507)
chr3 (205-253)||(45131436-45131484)
chr3 (193-253)||(47891412-47891472)
chr3 (194-249)||(3377014-3377069)
chr3 (363-442)||(7943052-7943131)
chr3 (363-441)||(33926145-33926224)
chr3 (211-253)||(7607718-7607759)
chr3 (207-253)||(14964889-14964934)
chr3 (203-253)||(26976371-26976421)
chr3 (348-442)||(33235594-33235687)
chr3 (207-253)||(40286297-40286343)
chr3 (346-388)||(40390357-40390399)
chr3 (206-248)||(47069766-47069808)
chr3 (207-253)||(47891352-47891398)
chr3 (346-440)||(50624952-50625046)
chr3 (364-442)||(9607265-9607345)
chr3 (194-246)||(3382500-3382552)
chr3 (207-239)||(5442124-5442156)
chr3 (193-253)||(21696600-21696659)
chr3 (193-253)||(25848272-25848332)
chr3 (361-405)||(28905042-28905086)
chr3 (348-396)||(45288056-45288104)
[»] chr2 (65 HSPs)
chr2 (346-442)||(10546203-10546299)
chr2 (345-440)||(9671221-9671316)
chr2 (343-440)||(21779257-21779354)
chr2 (344-435)||(8455313-8455404)
chr2 (346-441)||(14444769-14444864)
chr2 (347-442)||(10543738-10543835)
chr2 (346-440)||(36871534-36871627)
chr2 (346-442)||(17896300-17896396)
chr2 (347-442)||(14530358-14530455)
chr2 (346-435)||(25249737-25249826)
chr2 (345-442)||(5841068-5841167)
chr2 (344-432)||(11514486-11514573)
chr2 (358-442)||(19977725-19977809)
chr2 (366-442)||(26684639-26684715)
chr2 (366-442)||(31821362-31821438)
chr2 (193-253)||(33847725-33847785)
chr2 (194-249)||(5009468-5009523)
chr2 (363-442)||(24890451-24890530)
chr2 (347-442)||(25079717-25079812)
chr2 (347-442)||(25632549-25632644)
chr2 (358-441)||(30826077-30826159)
chr2 (348-433)||(13245096-13245181)
chr2 (347-440)||(23397806-23397899)
chr2 (342-410)||(23488555-23488623)
chr2 (359-442)||(4516363-4516446)
chr2 (347-402)||(8575975-8576030)
chr2 (347-402)||(14544146-14544201)
chr2 (344-395)||(22371199-22371250)
chr2 (367-442)||(32781308-32781383)
chr2 (347-434)||(40762234-40762321)
chr2 (346-435)||(17668049-17668138)
chr2 (363-440)||(25641543-25641620)
chr2 (364-442)||(31158456-31158536)
chr2 (363-404)||(34766333-34766374)
chr2 (345-442)||(39914304-39914400)
chr2 (345-442)||(44643563-44643660)
chr2 (367-435)||(17380257-17380325)
chr2 (344-404)||(34080179-34080239)
chr2 (348-404)||(40579750-40579806)
chr2 (350-418)||(45235820-45235888)
chr2 (378-441)||(12023950-12024013)
chr2 (367-442)||(21377093-21377168)
chr2 (378-441)||(22371095-22371158)
chr2 (346-442)||(24200622-24200720)
chr2 (360-430)||(99278-99348)
chr2 (360-418)||(24059009-24059067)
chr2 (363-421)||(24860004-24860062)
chr2 (207-253)||(25895208-25895254)
chr2 (359-417)||(31525771-31525829)
chr2 (346-435)||(17623611-17623700)
chr2 (192-249)||(44556509-44556566)
chr2 (363-395)||(124930-124962)
chr2 (193-253)||(4189045-4189105)
chr2 (193-253)||(9500890-9500950)
chr2 (193-253)||(14166479-14166539)
chr2 (363-410)||(4794874-4794921)
chr2 (210-253)||(5009405-5009448)
chr2 (206-253)||(25894963-25895010)
chr2 (358-441)||(39499241-39499324)
chr2 (349-404)||(41409940-41409995)
chr2 (206-253)||(43699471-43699518)
chr2 (347-397)||(3633708-3633758)
chr2 (364-410)||(19185760-19185806)
chr2 (357-402)||(19615073-19615118)
chr2 (208-253)||(29379925-29379970)
[»] chr1 (69 HSPs)
chr1 (346-442)||(46247952-46248048)
chr1 (347-442)||(4349701-4349796)
chr1 (344-440)||(34725095-34725191)
chr1 (363-442)||(23768336-23768415)
chr1 (343-442)||(10668288-10668389)
chr1 (344-421)||(27474364-27474441)
chr1 (346-442)||(6925163-6925259)
chr1 (345-433)||(14617110-14617198)
chr1 (345-442)||(35005186-35005285)
chr1 (342-442)||(30395721-30395823)
chr1 (346-441)||(31382213-31382308)
chr1 (343-441)||(32632553-32632651)
chr1 (346-440)||(35253186-35253280)
chr1 (346-441)||(42304206-42304303)
chr1 (358-440)||(47214574-47214656)
chr1 (346-442)||(18944706-18944805)
chr1 (350-442)||(46991867-46991959)
chr1 (345-440)||(19414502-19414597)
chr1 (350-421)||(45402180-45402251)
chr1 (367-441)||(11596576-11596650)
chr1 (346-440)||(12126836-12126930)
chr1 (346-440)||(38478281-38478375)
chr1 (363-440)||(10378751-10378828)
chr1 (345-442)||(41319804-41319901)
chr1 (366-435)||(43768209-43768278)
chr1 (367-435)||(15505634-15505702)
chr1 (193-253)||(26879693-26879753)
chr1 (346-410)||(50606498-50606562)
chr1 (343-442)||(6983807-6983906)
chr1 (346-442)||(18741956-18742054)
chr1 (363-441)||(19974090-19974169)
chr1 (370-441)||(21910673-21910743)
chr1 (363-435)||(27201717-27201791)
chr1 (343-442)||(20004086-20004187)
chr1 (346-432)||(23796538-23796624)
chr1 (369-435)||(25468285-25468351)
chr1 (207-253)||(34173317-34173363)
chr1 (346-440)||(45812536-45812630)
chr1 (346-431)||(1517310-1517395)
chr1 (344-442)||(19932750-19932850)
chr1 (345-430)||(20999848-20999933)
chr1 (346-442)||(8197106-8197202)
chr1 (358-410)||(19701666-19701718)
chr1 (370-442)||(20982773-20982845)
chr1 (193-253)||(33650383-33650443)
chr1 (367-442)||(18724565-18724640)
chr1 (344-399)||(19386573-19386628)
chr1 (362-404)||(20169104-20169146)
chr1 (367-433)||(44485129-44485195)
chr1 (363-404)||(33594147-33594188)
chr1 (193-250)||(33650696-33650753)
chr1 (366-442)||(50812003-50812079)
chr1 (345-397)||(9939572-9939624)
chr1 (371-435)||(20036291-20036355)
chr1 (363-411)||(30555209-30555257)
chr1 (367-442)||(31442409-31442485)
chr1 (363-410)||(35117781-35117829)
chr1 (193-253)||(40892591-40892651)
chr1 (363-441)||(2435802-2435881)
chr1 (363-410)||(4587579-4587626)
chr1 (367-410)||(30682907-30682950)
chr1 (194-253)||(52913017-52913076)
chr1 (207-253)||(2633555-2633601)
chr1 (364-442)||(18335305-18335383)
chr1 (370-440)||(34148983-34149053)
chr1 (363-392)||(31272397-31272426)
chr1 (346-402)||(16120819-16120875)
chr1 (349-389)||(22325009-22325049)
chr1 (363-431)||(35019304-35019371)
[»] scaffold1176 (1 HSPs)
scaffold1176 (342-440)||(1583-1680)
[»] chr7 (63 HSPs)
chr7 (346-442)||(7879678-7879774)
chr7 (346-442)||(38262195-38262291)
chr7 (342-441)||(18512448-18512547)
chr7 (345-440)||(21172007-21172102)
chr7 (346-440)||(42391099-42391193)
chr7 (363-442)||(2541035-2541114)
chr7 (342-432)||(31591104-31591194)
chr7 (346-440)||(32758301-32758395)
chr7 (347-433)||(48735122-48735208)
chr7 (363-440)||(10693089-10693166)
chr7 (364-441)||(34626225-34626302)
chr7 (345-434)||(40463924-40464013)
chr7 (346-442)||(27629674-27629770)
chr7 (346-430)||(27889315-27889399)
chr7 (345-433)||(35787267-35787355)
chr7 (366-441)||(38604567-38604642)
chr7 (348-442)||(11617589-11617683)
chr7 (368-442)||(19266490-19266564)
chr7 (351-441)||(33871914-33872004)
chr7 (347-397)||(45018923-45018973)
chr7 (346-442)||(19426889-19426984)
chr7 (193-253)||(42312744-42312804)
chr7 (346-442)||(42798709-42798805)
chr7 (206-253)||(6694762-6694809)
chr7 (363-442)||(8148962-8149040)
chr7 (363-442)||(23231597-23231676)
chr7 (363-442)||(35334832-35334911)
chr7 (346-442)||(42805564-42805662)
chr7 (207-253)||(29710379-29710425)
chr7 (347-442)||(47716499-47716596)
chr7 (345-410)||(39123967-39124032)
chr7 (193-253)||(6694516-6694576)
chr7 (348-440)||(11741835-11741927)
chr7 (363-435)||(18747534-18747606)
chr7 (193-253)||(27280599-27280659)
chr7 (366-442)||(28078151-28078227)
chr7 (210-253)||(3198273-3198316)
chr7 (367-434)||(13805149-13805216)
chr7 (346-441)||(19265855-19265949)
chr7 (350-397)||(42495865-42495912)
chr7 (207-253)||(6222079-6222125)
chr7 (207-253)||(27576623-27576669)
chr7 (207-253)||(29710612-29710658)
chr7 (207-252)||(11975506-11975551)
chr7 (348-433)||(42476920-42477005)
chr7 (363-440)||(47077871-47077948)
chr7 (193-253)||(29710305-29710365)
chr7 (348-442)||(29907459-29907552)
chr7 (193-253)||(31453074-31453134)
chr7 (346-394)||(36602535-36602583)
chr7 (346-442)||(43557512-43557611)
chr7 (369-440)||(2662958-2663028)
chr7 (210-253)||(30869632-30869675)
chr7 (363-410)||(33500587-33500634)
chr7 (376-442)||(1408497-1408563)
chr7 (363-442)||(3469191-3469272)
chr7 (207-253)||(11975673-11975719)
chr7 (204-254)||(41666375-41666425)
chr7 (210-251)||(4048264-4048305)
chr7 (208-253)||(6069293-6069338)
chr7 (193-253)||(27280901-27280961)
chr7 (193-253)||(30869692-30869752)
chr7 (354-410)||(47514793-47514848)
[»] scaffold0018 (3 HSPs)
scaffold0018 (347-442)||(72867-72962)
scaffold0018 (206-253)||(161402-161449)
scaffold0018 (207-253)||(161697-161743)
[»] scaffold0015 (1 HSPs)
scaffold0015 (345-440)||(48632-48727)
[»] chr6 (49 HSPs)
chr6 (345-440)||(1354755-1354850)
chr6 (346-440)||(1347004-1347098)
chr6 (346-440)||(26097200-26097294)
chr6 (346-435)||(29355854-29355945)
chr6 (346-440)||(25557765-25557859)
chr6 (346-442)||(12221913-12222012)
chr6 (193-253)||(21598738-21598798)
chr6 (346-410)||(24097649-24097713)
chr6 (344-427)||(23930124-23930207)
chr6 (346-419)||(13267788-13267861)
chr6 (193-253)||(10356554-10356614)
chr6 (193-253)||(13273053-13273113)
chr6 (346-409)||(6808468-6808531)
chr6 (346-409)||(9161197-9161260)
chr6 (345-410)||(12885985-12886050)
chr6 (364-441)||(32579466-32579543)
chr6 (363-442)||(19340868-19340947)
chr6 (346-409)||(12892082-12892145)
chr6 (206-253)||(35225396-35225443)
chr6 (207-253)||(10356494-10356540)
chr6 (207-253)||(21598504-21598550)
chr6 (207-253)||(21598678-21598724)
chr6 (363-435)||(7947387-7947460)
chr6 (364-397)||(10734922-10734955)
chr6 (346-395)||(32728156-32728205)
chr6 (346-442)||(1941895-1941991)
chr6 (346-431)||(2166409-2166496)
chr6 (346-431)||(2178042-2178129)
chr6 (193-253)||(9982655-9982715)
chr6 (364-404)||(11395839-11395879)
chr6 (193-253)||(17136829-17136889)
chr6 (363-418)||(15866055-15866110)
chr6 (211-254)||(17342672-17342715)
chr6 (210-253)||(17342733-17342776)
chr6 (206-253)||(21598443-21598490)
chr6 (347-421)||(383760-383834)
chr6 (364-410)||(3116146-3116192)
chr6 (207-253)||(10356320-10356366)
chr6 (207-253)||(35050813-35050859)
chr6 (193-250)||(3848533-3848590)
chr6 (363-440)||(23240840-23240917)
chr6 (209-254)||(35050757-35050802)
chr6 (193-253)||(2761634-2761694)
chr6 (193-253)||(9982962-9983022)
chr6 (193-253)||(10356246-10356306)
chr6 (346-402)||(20906785-20906841)
chr6 (193-237)||(24059653-24059696)
chr6 (366-402)||(29016301-29016337)
chr6 (208-252)||(35225458-35225502)
[»] scaffold0223 (1 HSPs)
scaffold0223 (347-432)||(11179-11264)
[»] scaffold0311 (1 HSPs)
scaffold0311 (363-442)||(10850-10929)
[»] scaffold0168 (1 HSPs)
scaffold0168 (346-440)||(30619-30713)
[»] scaffold0180 (1 HSPs)
scaffold0180 (346-434)||(24132-24220)
[»] scaffold0258 (1 HSPs)
scaffold0258 (346-433)||(13023-13110)
[»] scaffold0954 (1 HSPs)
scaffold0954 (363-442)||(3584-3663)
[»] scaffold0279 (1 HSPs)
scaffold0279 (207-253)||(1227-1273)
[»] scaffold0049 (1 HSPs)
scaffold0049 (363-442)||(59017-59098)
[»] scaffold0187 (2 HSPs)
scaffold0187 (369-421)||(10072-10124)
scaffold0187 (369-421)||(20400-20452)


Alignment Details
Target: chr4 (Bit Score: 422; Significance: 0; HSPs: 93)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 422; E-Value: 0
Query Start/End: Original strand, 1 - 442
Target Start/End: Complemental strand, 14984315 - 14983874
Alignment:
Q  1 atataaaggattgattgcagagattcaaattgctgttcacagctgagtcatttctcttttacctagacattggacttttatacgtggtttaagggaaagt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14984315 atataaaggattgattgcagagattcaaattgctgttcacagctgagtcatttctcttttacctagacattggacttttatacgtggtttgagggaaagt 14984216  T
Q  101 ggtccttttgaatttctgataatttaggtctctggatcaaaacacaactcgatggtgcacctggagtctctatagcaaataatattttgggaaaattaca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14984215 ggtccttttgaatttctgataatttaggtctctggatcaaaacacaactcgatggtgcacctggagtctctatagcaaataatattttgggaaaattaca 14984116  T
Q  201 tcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttatttcacaaacttaaaggacttaaagaacccctggtgtaatttaacctaat 300  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14984115 tcagaggtcctttaagtttgatgtttgtaacatattggtcctttaagttatttcacaaacttaaaggacttaaagaacccctggtgtaatttaacctaat 14984016  T
Q  301 attttgtagttatgtagtaaacttctgtaaagcatgatttgaaataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagt 400  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  14984015 attttgtagttatgtagtaaacttctgtaaagcatgatttggaataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggggt 14983916  T
Q  401 cccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  14983915 cccaccatttagtgtattgtaggcaaccttaccctatttttt 14983874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 347 - 442
Target Start/End: Original strand, 30690176 - 30690271
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||| | |||| ||||||||||||||||||||||||||||||||||| |||||| || || |||||||||| ||| ||||||||| ||||||    
T  30690176 aaagggcagcctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccaattggtgtattgtatgcagccttaccctgtttttt 30690271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 20639657 - 20639754
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| || ||| |||||||||| ||| ||||||||| ||||||    
T  20639657 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattttggtgtattgtacgcagccttaccctgtttttt 20639754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 346 - 442
Target Start/End: Complemental strand, 25629185 - 25629089
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||| |||||||||||||||||| | |||||||||||||| |||||| ||||| ||||||||||  || ||||||||||||||||    
T  25629185 aaaagggcaacccggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctatttttt 25629089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 346 - 441
Target Start/End: Complemental strand, 5648394 - 5648299
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    |||||||||||   || |||| |||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| |||||    
T  5648394 aaaagggcaacccagtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 5648299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 346 - 442
Target Start/End: Complemental strand, 23501925 - 23501827
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||| |||||||||||||||||| |||||||||||||||| |||||| |||  || |||||||||| ||||||||||||| ||||||    
T  23501925 aaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccctgtttttt 23501827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 441
Target Start/End: Original strand, 6430627 - 6430720
Alignment:
Q  348 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    |||||||||  ||| | ||||||||||||||||||||||||||||||||  |||||| ||||| |||||||||| ||| ||||||||| |||||    
T  6430627 aagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaagtggtcccaccatttggtgtattgtacgcagccttaccctgttttt 6430720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 347 - 440
Target Start/End: Complemental strand, 20225117 - 20225024
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    ||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  20225117 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 20225024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 363 - 441
Target Start/End: Original strand, 7909296 - 7909375
Alignment:
Q  363 cactaaagctccc-gcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    ||||||||||||| ||||||||||||| |||||||| |||||| ||||| |||||||||| ||||||||||||| |||||    
T  7909296 cactaaagctccccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttt 7909375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 440
Target Start/End: Original strand, 29207900 - 29207991
Alignment:
Q  349 agggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    ||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  29207900 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 29207991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 346 - 441
Target Start/End: Complemental strand, 30639515 - 30639420
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    |||||||||||   || |||||||||||||||||| |||||||||||||||| ||| || ||||| |||||||||| ||| ||||||||| |||||    
T  30639515 aaaagggcaacccagtgcactaaagctcccgcatatgcagggtccgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttt 30639420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 344 - 435
Target Start/End: Complemental strand, 16911702 - 16911609
Alignment:
Q  344 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccct 435  Q
    |||||||||||||  |||| |||||||||||||| ||||||||||||||||||| |||||| |||  || |||||||||| ||| |||||||||    
T  16911702 ataaaagggcaacccggtaaactaaagctcccgcgtacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct 16911609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 435
Target Start/End: Original strand, 5306659 - 5306752
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccg----catacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 435  Q
    |||||||||||  ||| || |||||||||||    ||||||||||||||||||||| |||||| ||||| |||||||||| |||||||||||||    
T  5306659 aaaagggcaacccggtgcattaaagctcccgtccacatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccct 5306752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 7246376 - 7246316
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||  ||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  7246376 aaattacatttgagatcctttaagtttgaggtttgtaacatattggtcttttaagttattt 7246316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 30352579 - 30352643
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 410  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||| ||||| |||||| |||||    
T  30352579 aaaagggcaacacggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccattt 30352643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 442
Target Start/End: Complemental strand, 47444093 - 47443997
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||   || |||| ||||||| ||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||||    
T  47444093 aaaagggcaacccagtgcactgaagctcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttt 47443997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 442
Target Start/End: Original strand, 51865057 - 51865133
Alignment:
Q  366 taaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||||||||||||||||||||||| | |||| ||||| |||||||||| ||| ||||||| | ||||||    
T  51865057 taaagctcccgcatacgcagggtccgggaaggggccccaccatttggtgtattgtacgcagccttaccatgtttttt 51865133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 37494970 - 37494891
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||| ||||||||||||||| | |||| |||||| ||||| || ||||||| ||||||||||||| ||||||    
T  37494970 cactaaagctcctgcatacgcagggtcccgaaaggggtcccaccatttggtatattgtatgcaaccttaccctgtttttt 37494891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 347 - 410
Target Start/End: Original strand, 44363130 - 44363193
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 410  Q
    ||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| |||||    
T  44363130 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 44363193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 346 - 440
Target Start/End: Original strand, 9832312 - 9832406
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    |||||||||||  ||| ||||| || ||| ||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  9832312 aaaagggcaacccggtgcactagagttcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 9832406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 20405208 - 20405127
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||||||||| || ||||||||||||| |||||| |||  ||||||||||||| |||| |||||||| ||||||    
T  20405208 cactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattagtgtattgtacgcaatcttaccctgtttttt 20405127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 346 - 404
Target Start/End: Original strand, 36816383 - 36816441
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtccca 404  Q
    |||||||||||  ||||||||||||||||||||||| |||||||| |||||||||||||    
T  36816383 aaaagggcaacccggtacactaaagctcccgcatacacagggtccaggaaggagtccca 36816441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 347 - 409
Target Start/End: Original strand, 38755908 - 38755970
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatt 409  Q
    ||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  38755908 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 38755970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 363 - 433
Target Start/End: Complemental strand, 40915947 - 40915877
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttacc 433  Q
    |||| ||||||||||||||||||||||||||||||  ||||| ||||| |||||||||| ||| |||||||    
T  40915947 cactgaagctcccgcatacgcagggtccgggaagggctcccaccatttggtgtattgtacgcagccttacc 40915877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 346 - 440
Target Start/End: Original strand, 47528529 - 47528623
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    |||||||||||  ||| ||||| ||||||| ||||  ||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  47528529 aaaagggcaacccggtgcactagagctcccacatattcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 47528623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 346 - 440
Target Start/End: Original strand, 48598824 - 48598918
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    |||||||||||  ||| ||||| |||||| ||||| ||| |||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  48598824 aaaagggcaacccggtgcactagagctccggcatatgcatggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 48598918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 54730371 - 54730290
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||||||||||||||||||||||||| || |||||||  || ||||||| || ||| ||||| ||||||||||    
T  54730371 cactaaagctcccgcatacgcagggtccgggaaggggttccatcattattggtgtattatacgcagccttatcctatttttt 54730290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 20908635 - 20908732
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||| | | || |||||||||||||||||||||||||| |||||||| |||||| || ||| |||||||||| ||| ||||||| | ||||||    
T  20908635 aaaagggcagccttgtgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgcagccttaccttctttttt 20908732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 433
Target Start/End: Complemental strand, 49796911 - 49796846
Alignment:
Q  368 aagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttacc 433  Q
    ||||||||||||||||||||| |||||||| |||||| ||||| |||||||||| ||| |||||||    
T  49796911 aagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttacc 49796846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 370 - 442
Target Start/End: Original strand, 7385499 - 7385571
Alignment:
Q  370 gctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||| ||||||||||||| | |||||| ||||| |||||||| |  |||||||||||||||||||    
T  7385499 gctcccgcatacacagggtccgggaaagggtcccaccatttggtgtattgcacacaaccttaccctatttttt 7385571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 346 - 442
Target Start/End: Complemental strand, 35567306 - 35567210
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||| |  ||| |||||||||||||||| ||||||||| |||||||| |||||| ||||| |||| |||||  || ||||||||| ||||||    
T  35567306 aaaagggcagcccggtgcactaaagctcccgcagacgcagggttcgggaaggggtcccaccatttggtgtgttgtacacagccttaccctgtttttt 35567210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 346 - 418
Target Start/End: Complemental strand, 38786745 - 38786673
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtatt 418  Q
    |||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||    
T  38786745 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatt 38786673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 347 - 410
Target Start/End: Complemental strand, 11394987 - 11394924
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 410  Q
    ||||||||||  ||| |||||||||||||||||||||||||||||| |||| |||||| |||||    
T  11394987 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccattt 11394924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 347 - 410
Target Start/End: Complemental strand, 11404714 - 11404651
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 410  Q
    ||||||||||  ||| |||||||||||||||||||||||||||||| |||| |||||| |||||    
T  11404714 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccattt 11404651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 347 - 435
Target Start/End: Complemental strand, 20225211 - 20225121
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccct 435  Q
    ||||||||||  ||| |||||||||||||||||| || ||||||||||||| |||||| |||  || |||||||||| ||| |||||||||    
T  20225211 aaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct 20225121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 430
Target Start/End: Complemental strand, 25463237 - 25463174
Alignment:
Q  367 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaacctt 430  Q
    |||||||||||||| |||||||||||||||| |||||| ||||| |||| ||||| ||||||||    
T  25463237 aaagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtgttgtacgcaacctt 25463174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 409
Target Start/End: Original strand, 33836486 - 33836549
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatt 409  Q
    |||||||||||  | | ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  33836486 aaaagggcaacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 33836549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 397
Target Start/End: Complemental strand, 35532128 - 35532077
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaagg 397  Q
    |||||||||||  ||| |||||||||||||||||||||||||||||||||||    
T  35532128 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaagg 35532077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 40553932 - 40553987
Alignment:
Q  342 aaataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaagg 397  Q
    |||| ||||||||||  ||| |||||||||||||||||||||||||||||||||||    
T  40553932 aaattaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaagg 40553987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 440
Target Start/End: Original strand, 11054147 - 11054241
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    |||||||||||  ||| ||||| |||||||||||| |||||||||||||||| || ||  ||||| |||||||||| |||  |||||||| ||||    
T  11054147 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccgccatttggtgtattgtacgcagtcttaccctgtttt 11054241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 404
Target Start/End: Complemental strand, 32484369 - 32484311
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtccca 404  Q
    |||||||||||  ||| |||||||||||||||||| |||||||||||||||| ||||||    
T  32484369 aaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtccca 32484311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 41083113 - 41083159
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||    
T  41083113 gtcctttaagtttgaagtttgtaacatattggtcctttaagttattt 41083159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 435
Target Start/End: Original strand, 8473621 - 8473710
Alignment:
Q  348 aagggcaacatggtacactaaagctcccgcatacgca-gggtcc-gggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 435  Q
    |||||||||  ||| |||||||||||||||||| ||| |||||| ||||||| |||||| ||||| |||||||||| ||| |||||||||    
T  8473621 aagggcaacccggtgcactaaagctcccgcatatgcaggggtccggggaaggggtcccaccatttggtgtattgtatgcagccttaccct 8473710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 346 - 441
Target Start/End: Complemental strand, 54175201 - 54175104
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtcc-gggaaggagtcccatca-tttagtgtattgtaggcaaccttaccctattttt 441  Q
    ||||||||| |  ||| |||||||||||||||||| ||||||||| ||||||| |||||| || ||| |||||||||| ||| ||||||||| |||||    
T  54175201 aaaagggcagcccggtgcactaaagctcccgcatatgcagggtccggggaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttt 54175104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 438
Target Start/End: Original strand, 9987853 - 9987925
Alignment:
Q  366 taaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatt 438  Q
    ||||||||||||||| ||| ||||  |||||| |||||| ||||| |||||||||| ||| ||||||||||||    
T  9987853 taaagctcccgcatatgcaaggtcaaggaaggggtcccaccatttggtgtattgtatgcagccttaccctatt 9987925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 25056248 - 25056188
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||| |||  ||| ||||||||||| |||||||||| ||||||||||||||||||||    
T  25056248 aaattacaccaggagtcttttaagtttgaggtttgtaacaaattggtcttttaagttattt 25056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 41083406 - 41083346
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||  || |||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  41083406 aaattacaataggggtcctttaagtttgaggtttgtaacagattggtcctttaagttattt 41083346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 435
Target Start/End: Original strand, 55766482 - 55766554
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 435  Q
    ||||||||||| |||||||||| ||||||||| || || ||| |||| ||||||||||| ||| |||||||||    
T  55766482 cactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgcagccttaccct 55766554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 435
Target Start/End: Original strand, 55830721 - 55830809
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 435  Q
    |||||||| | |||| ||||||||||| |||||||||| ||||||||| || || ||| |||| ||||||||||| ||| | |||||||    
T  55830721 aaagggcatcctggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgcagcattaccct 55830809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 16408600 - 16408698
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||| |||||||||||||||||| || ||||||||||||| || ||| |||  || |||||||||| |||  |||||||| ||||||    
T  16408600 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtttttt 16408698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 19027967 - 19027888
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||| ||||||||| ||| || |||| |||||| || || |||||||||| ||| ||||||||| ||||||    
T  19027967 cactaaagctcccacatacgcagagtctggaaaggggtcccaccaattggtgtattgtacgcagccttaccctgtttttt 19027888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 442
Target Start/End: Complemental strand, 21647098 - 21647004
Alignment:
Q  350 gggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||  ||| |||||||||||||||||| || ||||| ||||||| |||||| |||  || || ||||||| ||| ||||||||||||||||    
T  21647098 gggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatattgtacgcagccttaccctatttttt 21647004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 363 - 434
Target Start/End: Original strand, 30496338 - 30496409
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccc 434  Q
    ||||||||||||  |||| ||| ||||||||||||||||||  ||||| |||||||||| ||| ||||||||    
T  30496338 cactaaagctccatcataagcacggtccgggaaggagtccccccatttggtgtattgtatgcagccttaccc 30496409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 367 - 418
Target Start/End: Original strand, 32478811 - 32478862
Alignment:
Q  367 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtatt 418  Q
    ||||||||||||||||| ||||||||||||| |||||| ||||| |||||||    
T  32478811 aaagctcccgcatacgctgggtccgggaaggggtcccaccatttggtgtatt 32478862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 253
Target Start/End: Original strand, 41083052 - 41083099
Alignment:
Q  206 ggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||||    
T  41083052 ggtcctttaagtttgaggtttgtaacatattgatcatttaagttattt 41083099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 367 - 410
Target Start/End: Original strand, 47482870 - 47482913
Alignment:
Q  367 aaagctcccgcatacgcagggtccgggaaggagtcccatcattt 410  Q
    ||||||||||||||||||||||||||||||| |||||| |||||    
T  47482870 aaagctcccgcatacgcagggtccgggaaggggtcccaccattt 47482913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 367 - 442
Target Start/End: Complemental strand, 54967135 - 54967061
Alignment:
Q  367 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||||| | ||||| |||||||| |||||| ||||| || ||||||| ||||||||||||| ||||||    
T  54967135 aaagctcccgcatatgtagggtacgggaaggggtcccaccatttggtatattgta-gcaaccttaccctgtttttt 54967061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 7246051 - 7246097
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  7246051 gtcctttaagtttgatatttgtaacaaattggtcgtttaagttattt 7246097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 409
Target Start/End: Complemental strand, 25388311 - 25388249
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatt 409  Q
    ||||||||||  ||| |||||||||||  |||||||||||||||||||||| |||||| ||||    
T  25388311 aaagggcaacccggtgcactaaagctcatgcatacgcagggtccgggaaggggtcccaccatt 25388249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 440
Target Start/End: Original strand, 39077795 - 39077889
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    |||| ||||||  ||| ||||| |||||||||||| ||||||||||| |||  ||| || ||||| || ||||||| ||||||||||||| ||||    
T  39077795 aaaaaggcaacccggtgcactagagctcccgcatatgcagggtccggaaagatgtctcaccatttggtatattgtacgcaaccttaccctgtttt 39077889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 45038454 - 45038408
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  45038454 gtcctttaagtttgaggtttgtaacagattggtcctttaagttattt 45038408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 26782353 - 26782398
Alignment:
Q  208 tcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  26782353 tcctttaagtttgatatttgtaacagattggtcctttaagttattt 26782398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 17231973 - 17232033
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||  || |||||||||||| |||||||||| ||  ||||||||||||||||    
T  17231973 aaattacatcagcagttctttaagtttgaggtttgtaacagataagtcttttaagttattt 17232033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 26782585 - 26782525
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||  | |||||||||||||||| |||||||| |||||| | |||||||||||||    
T  26782585 aaattacatttggggtcctttaagtttgaggtttgtaatatattgattttttaagttattt 26782525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 30581481 - 30581561
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||  |||| |||||||||||||||| |||||| || ||| ||||||||||  || ||||||||| ||||||    
T  30581481 cactaaagctcctacatatgcagggtccgggaaggggtcccaccattttggtgtattgtacacacccttaccctgtttttt 30581561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 45038174 - 45038234
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||   ||| |||||||||||| |||||||| |||||| |||||||||||||||    
T  45038174 aaattacatccagggttctttaagtttgaggtttgtaatatattgatcttttaagttattt 45038234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 45787008 - 45787068
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||| | ||||||||||||||||||||  ||||||||||| | | ||||||||||||||    
T  45787008 aaattaaaccagaggtcctttaagtttgagctttgtaacatactaggcttttaagttattt 45787068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 55617627 - 55617583
Alignment:
Q  209 cctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||||    
T  55617627 cctttaagtttgaggtttgcaacatatttgtcttttaagttattt 55617583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 55624931 - 55624887
Alignment:
Q  209 cctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||||    
T  55624931 cctttaagtttgaggtttgcaacatatttgtcttttaagttattt 55624887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 13256398 - 13256496
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||| |||||||||||||||| | || |||| |||||||| ||||||  ||  || |||||||||| ||| ||||||||| ||||||    
T  13256398 aaaagggcaacccggtgcactaaagctcccgcagatgcggggttcgggaaggggtcccactattattggtgtattgtacgcagccttaccctgtttttt 13256496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 410
Target Start/End: Complemental strand, 21489203 - 21489160
Alignment:
Q  367 aaagctcccgcatacgcagggtccgggaaggagtcccatcattt 410  Q
    |||||||||||||||||||||| |||||||| |||||| |||||    
T  21489203 aaagctcccgcatacgcagggttcgggaaggggtcccaccattt 21489160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 24684384 - 24684337
Alignment:
Q  206 ggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||||||| |||| ||| | ||||||||||||||||||||    
T  24684384 ggtcctttaagtttgaggtttataatagattggtcttttaagttattt 24684337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 254
Target Start/End: Complemental strand, 41083328 - 41083285
Alignment:
Q  211 tttaagtttgatgtttgtaacatattggtcttttaagttatttc 254  Q
    ||||||||||| ||| |||||| |||||||||||||||||||||    
T  41083328 tttaagtttgaggttcgtaacagattggtcttttaagttatttc 41083285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 41519492 - 41519445
Alignment:
Q  206 ggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||||||| |||| ||||| ||| ||||||||||||||||    
T  41519492 ggtcctttaagtttgaggtttctaacaaattagtcttttaagttattt 41519445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 404
Target Start/End: Complemental strand, 44718684 - 44718645
Alignment:
Q  365 ctaaagctcccgcatacgcagggtccgggaaggagtccca 404  Q
    ||||||||||||||||||||||||| ||||||| ||||||    
T  44718684 ctaaagctcccgcatacgcagggtctgggaaggggtccca 44718645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 51950831 - 51950784
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtc 240  Q
    ||||||||||||| ||||||||||||||| |||||||| | |||||||    
T  51950831 aaattacatcagaagtcctttaagtttgaagtttgtaatagattggtc 51950784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 2470186 - 2470140
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||| ||||| |||||||| ||||||||| ||||||||||||    
T  2470186 gtcctttaaatttgaggtttgtaatatattggtcctttaagttattt 2470140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 9999564 - 9999522
Alignment:
Q  211 tttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||| |||||||||| ||||||| ||||||||||||    
T  9999564 tttaagtttgaggtttgtaacagattggtcatttaagttattt 9999522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 442
Target Start/End: Original strand, 12711450 - 12711544
Alignment:
Q  348 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||  ||| |||||||| | ||||||||||  |||| | ||||| |||||  ||||| |||||||||| |||  |||||||||||||||    
T  12711450 aagggcaactgggtgcactaaagtttccgcatacgctaggtctgagaaggggtcccgccatttggtgtattgtacgcagtcttaccctatttttt 12711544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 404
Target Start/End: Complemental strand, 19028047 - 19027989
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtccca 404  Q
    ||||||||| |  ||| |||||||||||||||||| |  ||||||||||||||||||||    
T  19028047 aaaagggcagcccggtgcactaaagctcccgcataagtggggtccgggaaggagtccca 19027989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 21322108 - 21322062
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||||| |||||||||| |||  |||||||||||||||    
T  21322108 gtcctttaagtttgaggtttgtaacacatttttcttttaagttattt 21322062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 396
Target Start/End: Original strand, 37038134 - 37038172
Alignment:
Q  358 tggtacactaaagctcccgcatacgcagggtccgggaag 396  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  37038134 tggtgcactaaagctcccgcatacgcagggtacgggaag 37038172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 442
Target Start/End: Original strand, 39029078 - 39029156
Alignment:
Q  365 ctaaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||||||| ||||||||||| |||  |||||| || ||| ||||||||||  || ||||||||| ||||||    
T  39029078 ctaaagctcccgcatatgcagggtccggaaagtggtcccaccattttcgtgtattgtacacagccttaccctgtttttt 39029156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 40395158 - 40395204
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||||| |||||||||||||| ||  ||||||||||||    
T  40395158 gtcctttaagtttgaggtttgtaacatattagttctttaagttattt 40395204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 46196169 - 46196215
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||||| |||||||||| ||||||| |||||| |||||    
T  46196169 gtcctttaagtttgacgtttgtaacaaattggtcctttaagatattt 46196215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 45038513 - 45038468
Alignment:
Q  208 tcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||||| |||||||| | ||||||| ||||||||||||    
T  45038513 tcctttaagtttgaggtttgtaatagattggtcatttaagttattt 45038468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 2470260 - 2470200
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||| ||| |||||||| ||||| | |||||||| | ||||||| ||||||||||||    
T  2470260 aaattacaccaggggtcctttcagtttaaggtttgtaatagattggtcctttaagttattt 2470200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 419
Target Start/End: Original strand, 3580860 - 3580912
Alignment:
Q  367 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattg 419  Q
    ||||||||| |||| |||||||||||||||| |||| | ||||| ||||||||    
T  3580860 aaagctcccacatatgcagggtccgggaaggggtcctagcatttggtgtattg 3580912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 7245977 - 7246037
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||| | | |||||||||||||||| ||||||||||  ||| || ||||||||||||    
T  7245977 aaattacacctggggtcctttaagtttgacgtttgtaacaggttgatcctttaagttattt 7246037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 12592468 - 12592424
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttat 251  Q
    ||||||||||||||| |||||||| | |||| |||||||||||||    
T  12592468 gtcctttaagtttgaagtttgtaatagattgatcttttaagttat 12592424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 440
Target Start/End: Complemental strand, 16494342 - 16494259
Alignment:
Q  359 ggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttaccctatttt 440  Q
    |||||||||||||| |||||||| ||||||| ||||| | |||||| ||  ||| |||||||||| ||| | ||||||| ||||    
T  16494342 ggtacactaaagcttccgcatacacagggtctgggaaagggtcccaccatttttggtgtattgtatgcagctttaccctgtttt 16494259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 435
Target Start/End: Original strand, 47441550 - 47441618
Alignment:
Q  367 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 435  Q
    |||||||| || ||| ||||||||||||||| |||| | ||||| ||||||||||  || |||||||||    
T  47441550 aaagctcctgcttactcagggtccgggaaggggtccaaccatttggtgtattgtacacagccttaccct 47441618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 53863671 - 53863611
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||   ||||||||||||| | |||||||| | ||||||| ||||||||||||    
T  53863671 aaattacatcatgagtcctttaagtttcaagtttgtaatagattggtcgtttaagttattt 53863611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 69; Significance: 9e-31; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 346 - 442
Target Start/End: Complemental strand, 46967 - 46871
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||||||||||||||||||||    
T  46967 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctatttttt 46871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 24771 - 24867
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  | | |||||||||||||||||||||||||| |||||||| |||||| ||||| |||| ||||| ||| ||||||||| ||||||    
T  24771 aaaagggcaaccggctgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtgttgtacgcagccttaccctgtttttt 24867  T

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Target: scaffold0057; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 433
Target Start/End: Complemental strand, 43796 - 43706
Alignment:
Q  344 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccg-ggaaggagtcccatcatttagtgtattgtaggcaaccttacc 433  Q
    |||||||||||||   || ||||| |||||||||||| |||||||||| | |||| |||||| ||||| |||||||||| ||| |||||||    
T  43796 ataaaagggcaactcagtgcactagagctcccgcatatgcagggtccgagaaaggggtcccaccatttggtgtattgtacgcagccttacc 43706  T

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Target: scaffold0057; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 435
Target Start/End: Original strand, 46726 - 46796
Alignment:
Q  366 taaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccct 435  Q
    |||||||||||||||||||||||| ||||||| |||||| || ||| || ||||||| ||| |||||||||    
T  46726 taaagctcccgcatacgcagggtctgggaaggggtcccaccattttggtatattgtatgcatccttaccct 46796  T

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Target: chr8 (Bit Score: 61; Significance: 5e-26; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 346 - 442
Target Start/End: Complemental strand, 35261815 - 35261719
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||| |||||||||||||||||||||||||||| |||||| |||||| ||||| |||||||||| ||||||||||||| ||||||    
T  35261815 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgtttttt 35261719  T

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Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 343 - 442
Target Start/End: Complemental strand, 36720935 - 36720836
Alignment:
Q  343 aataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||||  ||| |||||||||| |||||||||||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||||    
T  36720935 aataaaagggcaaccgggtgcactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttt 36720836  T

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Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 344 - 442
Target Start/End: Complemental strand, 44530287 - 44530189
Alignment:
Q  344 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||| ||||  ||| |||||||||||||||||||||||||||| |||||| |||||| ||||| |||||||||| ||| ||||||||| ||||||    
T  44530287 ataaaaggtcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttt 44530189  T

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Target: chr8; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 345 - 442
Target Start/End: Complemental strand, 12626027 - 12625930
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||  ||| |||||||||||||||||||||||||||||||| || |||||| ||||| |||||||||| |||  |||||||| ||||||    
T  12626027 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggagggggtcccaccatttggtgtattgtatgcagtcttaccctgtttttt 12625930  T

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Target: chr8; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 349 - 442
Target Start/End: Complemental strand, 29877227 - 29877134
Alignment:
Q  349 agggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||| | |||| |||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||||    
T  29877227 agggcagcctggtgcactaacgctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttt 29877134  T

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Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 8897763 - 8897859
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||| || ||||||||||||||| |||||||||||||||| |||||| ||||| |||||||||| | | ||||||||||||||||    
T  8897763 aaaagggcaaccgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgtagccttaccctatttttt 8897859  T

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Target: chr8; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 28817625 - 28817721
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  | | ||||||||||||||||||||||||||||||||||| |||||| ||||  |||||||||| ||| ||||||||| ||||||    
T  28817625 aaaagggcaacccgatgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattgggtgtattgtacgcagccttaccctgtttttt 28817721  T

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Target: chr8; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 363 - 441
Target Start/End: Complemental strand, 13160820 - 13160742
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    |||| |||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| |||||    
T  13160820 cactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 13160742  T

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Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 441
Target Start/End: Complemental strand, 45071398 - 45071305
Alignment:
Q  348 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    |||||||||  ||| |||| ||||||||||||||||| |||||||||||| |||||| ||||| |||||||||| ||| ||||||||| |||||    
T  45071398 aagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 45071305  T

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Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 389764 - 389685
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||| ||||||||||||||| || ||||  ||||||||||| |||||||||| ||||||||||||| ||||||    
T  389764 cactaaagctctcgcatacgcagggtcaggaaagggatcccatcatttggtgtattgtacgcaaccttaccctgtttttt 389685  T

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Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 347 - 442
Target Start/End: Complemental strand, 2626657 - 2626562
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||  |||| |||| ||||||||||||| |||||||| ||||||| |||||||||||| |||||||||| |||  |||||||| ||||||    
T  2626657 aaagggcaatctggtgcactgaagctcccgcatatgcagggtctgggaaggggtcccatcatttggtgtattgtacgcagtcttaccctgtttttt 2626562  T

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Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 346 - 441
Target Start/End: Original strand, 18164759 - 18164854
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    |||| ||||||  ||| |||||||||||||||||||||||||||||||||   ||| |||| ||| |||||||||| ||||||||||||| |||||    
T  18164759 aaaatggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaatggtcacatcctttggtgtattgtacgcaaccttaccctgttttt 18164854  T

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Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 346 - 440
Target Start/End: Original strand, 12670249 - 12670343
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    ||||||| |||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  12670249 aaaagggtaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 12670343  T

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Target: chr8; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 344 - 442
Target Start/End: Original strand, 39460991 - 39461091
Alignment:
Q  344 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctattttt 441  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||||||| ||| || |||  || |||||||||| ||| |||||| || |||||    
T  39460991 ataaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgcagccttactctgttttt 39461090  T
Q  442 t 442  Q
    |    
T  39461091 t 39461091  T

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Target: chr8; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 367 - 442
Target Start/End: Original strand, 5135309 - 5135384
Alignment:
Q  367 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||| |||||||||||||||||||||| |||||| ||||| ||||||||||  || ||||||||| ||||||    
T  5135309 aaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctctttttt 5135384  T

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Target: chr8; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 192 - 251
Target Start/End: Original strand, 24827341 - 24827400
Alignment:
Q  192 aaaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttat 251  Q
    |||||||||||| ||||||||||||||||| |||||||||| ||||||| ||||||||||    
T  24827341 aaaattacatcataggtcctttaagtttgaggtttgtaacagattggtcatttaagttat 24827400  T

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Target: chr8; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 346 - 421
Target Start/End: Complemental strand, 26102653 - 26102578
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgta 421  Q
    |||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| ||||||||||    
T  26102653 aaaagggcaacccggtgcactagagctcccgcataagcagggtccgggaaggggtcccaccatttggtgtattgta 26102578  T

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Target: chr8; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 29521701 - 29521780
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||||||||||||||||| |||| ||  ||||| ||||| |||||||||| ||| ||||||||| ||||||    
T  29521701 cactaaagctcccgcatacgcagggtctgggatgggttcccaccatttggtgtattgtacgcagccttaccctgtttttt 29521780  T

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Target: chr8; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 346 - 433
Target Start/End: Original strand, 30454096 - 30454183
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttacc 433  Q
    |||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||| ||| ||| |||||||    
T  30454096 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatcgtacgcagccttacc 30454183  T

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Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 20284085 - 20284166
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||| ||||||||||||||||||||||||||| |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  20284085 cactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctttttttt 20284166  T

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Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 21070713 - 21070794
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||| ||||||||||||||||||||||||||| |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  21070713 cactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctttttttt 21070794  T

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Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 346 - 442
Target Start/End: Complemental strand, 10857965 - 10857869
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||| |||||||||||||||||||||| ||||| |||||  |||||| || || |||||||||  ||| ||||||||| ||||||    
T  10857965 aaaagggcaacccggtgcactaaagctcccgcatacgcaaggtccaggaagtggtcccaccaattggtgtattgtgcgcagccttaccctgtttttt 10857869  T

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Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 367 - 435
Target Start/End: Original strand, 24365079 - 24365147
Alignment:
Q  367 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 435  Q
    ||||||||| ||||||||||||||||||||| |||||| ||||| |||||||||  ||| |||||||||    
T  24365079 aaagctcccacatacgcagggtccgggaaggggtcccaccatttggtgtattgttcgcagccttaccct 24365147  T

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Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 41151390 - 41151450
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||| || |||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  41151390 aaattacaccataggtcctttaagtttgagttttgtaacatattggtcctttaagttattt 41151450  T

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Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 442
Target Start/End: Complemental strand, 20870061 - 20869963
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||| |||||||||||||||||| || |||||| |||||| |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  20870061 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtcctggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 20869963  T

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Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 342 - 440
Target Start/End: Complemental strand, 19729480 - 19729382
Alignment:
Q  342 aaataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    ||||||||||||||    || ||||| |||||||| ||| |||||||||||||||| |||||| ||||| ||||||||||  || ||||||||| ||||    
T  19729480 aaataaaagggcaatccagtgcactagagctcccgtatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctgtttt 19729382  T

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Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 396
Target Start/End: Original strand, 27468091 - 27468141
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaag 396  Q
    |||||||||||  ||| ||||||||||||||||||||||||||||||||||    
T  27468091 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaag 27468141  T

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Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 365 - 442
Target Start/End: Original strand, 8483956 - 8484033
Alignment:
Q  365 ctaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||||||||||||||| |||| || |||||| || || |||||||||| ||| |||| |||| ||||||    
T  8483956 ctaaagctcccgcatacgcagggtctgggatggggtcccaccaattggtgtattgtacgcagccttgccctgtttttt 8484033  T

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Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 442
Target Start/End: Original strand, 40604904 - 40605000
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||   ||| |||||||||||||||||||| |||||   ||||||  ||| |||||||||||||||||| ||||||||| || |||||||    
T  40604904 taaaagggcaattcggtgcactaaagctcccgcatacgtagggtttcggaagggatcc-atcatttagtgtattgtacgcaaccttatccaatttttt 40605000  T

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Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 435
Target Start/End: Complemental strand, 5689750 - 5689678
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 435  Q
    ||||||||||||| |||||||| ||| |||||||| || ||| ||||| |||||||||| ||| |||||||||    
T  5689750 cactaaagctcccacatacgcatggttcgggaaggggttccaccatttggtgtattgtacgcagccttaccct 5689678  T

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Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 435
Target Start/End: Original strand, 7136526 - 7136617
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccct 435  Q
    ||||||| |||  ||| |||||||||||||||||| || ||||||||||||| |||||| |||  || |||||||||| ||| |||||||||    
T  7136526 aaaagggtaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct 7136617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 442
Target Start/End: Complemental strand, 6760960 - 6760862
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||| |||||||||||||||||| || ||||||| ||||| |||||| |||  || |||||||||| | | ||||||||| ||||||    
T  6760960 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgagaaggggtcccaccattattggtgtattgtacgaagccttaccctgtttttt 6760862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 442
Target Start/End: Complemental strand, 25250660 - 25250562
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||| ||||||| |||||||||| || |||| |||||||| |||||| |||  || |||||||||| ||| || |||||||||||||    
T  25250660 aaaagggcaacccggtgcactaaatctcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattgtacgcagccataccctatttttt 25250562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 347 - 410
Target Start/End: Complemental strand, 28407538 - 28407475
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 410  Q
    ||||||||||  ||| || ||||||||||||||||| |||||||||||||| |||||| |||||    
T  28407538 aaagggcaacccggtgcagtaaagctcccgcatacgtagggtccgggaaggggtcccaccattt 28407475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 404
Target Start/End: Complemental strand, 27508029 - 27507988
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtccca 404  Q
    |||||||||||||||||||||||||| |||||||| ||||||    
T  27508029 cactaaagctcccgcatacgcagggttcgggaaggggtccca 27507988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 344 - 441
Target Start/End: Complemental strand, 31457310 - 31457213
Alignment:
Q  344 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    ||||||||||||   ||| ||||| ||||||||||||||||||||  ||||||| |||| | |||||  ||||||||| ||| ||||  |||||||||    
T  31457310 ataaaagggcaatccggtgcactagagctcccgcatacgcagggtttgggaaggggtcctaccatttgatgtattgtacgcagccttttcctattttt 31457213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 411
Target Start/End: Original strand, 35107310 - 35107375
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattta 411  Q
    |||||||||||  ||| |||||||||| |||||||| ||| ||||||||||| |||||| ||||||    
T  35107310 aaaagggcaacccggtgcactaaagcttccgcatacacagcgtccgggaaggggtcccaccattta 35107375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 6220168 - 6220228
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||| |  |||||||||||||||| ||||| |||| ||||||| ||||||||||||    
T  6220168 aaattacattaagggtcctttaagtttgaggtttgaaacaaattggtcctttaagttattt 6220228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 250
Target Start/End: Original strand, 9399814 - 9399858
Alignment:
Q  206 ggtcctttaagtttgatgtttgtaacatattggtcttttaagtta 250  Q
    |||||||||||||||| |||||||||||||||||  |||||||||    
T  9399814 ggtcctttaagtttgaggtttgtaacatattggttctttaagtta 9399858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 9400179 - 9400119
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||| ||||| ||| || ||||||||||| ||||||||||||||| || ||||||||||||    
T  9400179 aaatcacatcggagatcttttaagtttgaggtttgtaacatattgatcgtttaagttattt 9400119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 442
Target Start/End: Complemental strand, 26954272 - 26954173
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||   || |||||||||||||||||| ||  |||| ||||||| |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  26954272 taaaagggcaacccagtgcactaaagctcccgcatatgcgaggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 26954173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 205 - 253
Target Start/End: Original strand, 27052405 - 27052453
Alignment:
Q  205 aggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||||||||||||||||| | |||||||  |||||||||||    
T  27052405 aggtcctttaagtttgatgtttgtaatagattggtcccttaagttattt 27052453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 426
Target Start/End: Complemental strand, 16013592 - 16013510
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaa 426  Q
    |||||| ||||  ||| |||||||||||||||||| |||||||| ||||||| ||| || ||  |||||||||||||| ||||    
T  16013592 aaaaggacaacccggtgcactaaagctcccgcataggcagggtctgggaaggggtcgcaccatttttagtgtattgtacgcaa 16013510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 418
Target Start/End: Complemental strand, 17823711 - 17823640
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtatt 418  Q
    ||||||||||  ||| |||||||||||| ||||| ||||||| |||||||| || ||| ||||| |||||||    
T  17823711 aaagggcaacccggtgcactaaagctcctgcatatgcagggttcgggaaggggttccaccatttggtgtatt 17823640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 410
Target Start/End: Complemental strand, 18595957 - 18595910
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 410  Q
    ||||||| ||||||||||| ||||||||||||||| |||| |||||||    
T  18595957 cactaaaactcccgcatacacagggtccgggaaggggtcctatcattt 18595910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 24909743 - 24909696
Alignment:
Q  206 ggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||||||  ||||||||| ||||||| ||||||||||||    
T  24909743 ggtcctttaagtttgagatttgtaacaaattggtcctttaagttattt 24909696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 42667432 - 42667487
Alignment:
Q  194 aattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagtt 249  Q
    |||||||||| | ||||||||||||||| |||||||||| || |||| ||||||||    
T  42667432 aattacatcacatgtcctttaagtttgacgtttgtaacagataggtcctttaagtt 42667487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 410
Target Start/End: Original strand, 44781520 - 44781567
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 410  Q
    ||||||||||||||||||||||||||| |||| || |||||| |||||    
T  44781520 cactaaagctcccgcatacgcagggtctgggacggggtcccaacattt 44781567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 6220521 - 6220475
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||||| |||||||||| ||||||  ||||||||||||    
T  6220521 gtcctttaagtttgaggtttgtaacaaattggttctttaagttattt 6220475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 16225140 - 16225059
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||||||||| || |||||||||||||  ||||| |||  || |||||||||| |||  |||||||| ||||||    
T  16225140 cactaaagctcccgcatatgcggggtccgggaagggatcccaccattattggtgtattgtacgcagtcttaccctgtttttt 16225059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 366 - 404
Target Start/End: Complemental strand, 24245565 - 24245527
Alignment:
Q  366 taaagctcccgcatacgcagggtccgggaaggagtccca 404  Q
    ||||||||||||||||||||||||| |||||| ||||||    
T  24245565 taaagctcccgcatacgcagggtccaggaaggggtccca 24245527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 24827416 - 24827462
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||||||||||||||| | ||| ||| ||||||||||||    
T  24827416 gtcctttaagtttgatgtttgtaatagatttgtcatttaagttattt 24827462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 27052672 - 27052626
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||||| |||| ||||| ||||||| ||||||||||||    
T  27052672 gtcctttaagtttgaggtttataacagattggtcctttaagttattt 27052626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 27127874 - 27127922
Alignment:
Q  204 gaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||||||||| |||||||||| ||||||  ||||||||||||    
T  27127874 gaggtcctttaagtttga-gtttgtaacagattggttatttaagttattt 27127922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 27128220 - 27128168
Alignment:
Q  200 atcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||||||||||||| |||||||| | |||||| ||||| |||||||    
T  27128220 atcagaggtcctttaagtttgaggtttgtaatagattggt-ttttaggttattt 27128168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 438
Target Start/End: Complemental strand, 26457846 - 26457773
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatt 438  Q
    ||||||||||||| |||||||| |||| ||  ||| |||||| || || |||||||||| ||| ||||||||||||    
T  26457846 cactaaagctccctcatacgcaaggtcagg--aggggtcccaccaattggtgtattgtacgcagccttaccctatt 26457773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 402 - 438
Target Start/End: Complemental strand, 28873278 - 28873242
Alignment:
Q  402 ccatcatttagtgtattgtaggcaaccttaccctatt 438  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  28873278 ccatcatttggtgtattgtacgcaaccttaccctatt 28873242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 391
Target Start/End: Original strand, 30962771 - 30962815
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccg 391  Q
    ||||||||||  ||| ||||||| |||||||||||||||||||||    
T  30962771 aaagggcaacccggttcactaaatctcccgcatacgcagggtccg 30962815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 5e-26; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 346 - 442
Target Start/End: Complemental strand, 24449026 - 24448930
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||| |||||||||||| |||||||||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||||||||||    
T  24449026 aaaagggcaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctatttttt 24448930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 347 - 441
Target Start/End: Original strand, 7097760 - 7097854
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    |||||||| |||||| |||||||||||||||||||||||||| |||||||| ||| || ||||| |||||||||| ||||||||||||| |||||    
T  7097760 aaagggcagcatggtgcactaaagctcccgcatacgcagggttcgggaaggggtctcaccatttggtgtattgtacgcaaccttaccctgttttt 7097854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 345 - 421
Target Start/End: Complemental strand, 16957451 - 16957375
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgta 421  Q
    ||||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||    
T  16957451 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgta 16957375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 345 - 442
Target Start/End: Complemental strand, 38879720 - 38879621
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  38879720 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 38879621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 345 - 440
Target Start/End: Complemental strand, 32703559 - 32703464
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    ||||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  32703559 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 32703464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 345 - 441
Target Start/End: Complemental strand, 41014455 - 41014359
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    ||||||||||||  ||| |||||||||||||||||| || |||||| |||||| |||||| ||||| |||||||||| ||| ||||||||| |||||    
T  41014455 taaaagggcaacccggtgcactaaagctcccgcatatgcggggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 41014359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 365 - 440
Target Start/End: Complemental strand, 43574723 - 43574648
Alignment:
Q  365 ctaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||| || ||||||| ||| ||||||||| ||||    
T  43574723 ctaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtatattgtacgcagccttaccctgtttt 43574648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 346 - 440
Target Start/End: Original strand, 8169983 - 8170077
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    |||||||||||  ||| |||| || |||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  8169983 aaaagggcaacccggtgcactgaaactcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 8170077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 348 - 442
Target Start/End: Original strand, 12006329 - 12006425
Alignment:
Q  348 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||| ||| |||||||||||||||||| |||||||| ||||||| |||||| |||  || |||||||||| | | ||||||||||||||||    
T  12006329 aagggcaacacggtgcactaaagctcccgcataggcagggtctgggaaggggtcccaccattattggtgtattgtatggagccttaccctatttttt 12006425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 347 - 435
Target Start/End: Original strand, 34154814 - 34154902
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 435  Q
    ||||||||||  ||| ||||| |||| ||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| |||||||||    
T  34154814 aaagggcaacccggtgcactagagctaccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct 34154902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 16880663 - 16880742
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||||||||||||| |||||||||||  ||| || ||||| |||||||||| ||| ||||||||| ||||||    
T  16880663 cactaaagctcccgcatacgcatggtccgggaagtggtcacaccatttggtgtattgtacgcagccttaccctgtttttt 16880742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 346 - 442
Target Start/End: Complemental strand, 43334340 - 43334243
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||| ||||||||||||||||| ||||||||||||||||| |||||| ||  ||| |||||||||| ||| ||||||||| ||||||    
T  43334340 aaaagggcaacccggtgcactaaagctcccgcat-cgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttt 43334243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 343 - 442
Target Start/End: Original strand, 4619100 - 4619201
Alignment:
Q  343 aataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttt 440  Q
    ||||||||||||||  ||| ||||||||||| |||||| || ||||||||||||| |||||| |||  || |||||||||| ||| ||||||||| ||||    
T  4619100 aataaaagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttt 4619199  T
Q  441 tt 442  Q
    ||    
T  4619200 tt 4619201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 363 - 441
Target Start/End: Original strand, 19142959 - 19143037
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    ||||||| |||||||||||||| |||||||||||| |||||| ||||| ||||| |||| ||| ||||||||| |||||    
T  19142959 cactaaatctcccgcatacgcatggtccgggaaggggtcccaccatttggtgtactgtacgcagccttaccctgttttt 19143037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 346 - 440
Target Start/End: Complemental strand, 35710447 - 35710353
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    |||||||||||  ||| ||||| |||||||||||| ||| | |||||||||| |||||| ||||| |||||||| | ||| ||||||||||||||    
T  35710447 aaaagggcaacccggtgcactagagctcccgcatatgcatgttccgggaaggggtcccaccatttggtgtattgaacgcagccttaccctatttt 35710353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 28559216 - 28559280
Alignment:
Q  189 gggaaaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||| ||||  |||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  28559216 gggaaaattatatcacgggtcctttaagtttgacgtttgtaacagattggtcctttaagttattt 28559280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 358 - 442
Target Start/End: Original strand, 31694119 - 31694203
Alignment:
Q  358 tggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||| ||||||| |||||||||||||| |||| ||||||||||||||||| |  |||||||||| ||| | ||| ||||||||||    
T  31694119 tggtgcactaaatctcccgcatacgcaaggtctgggaaggagtcccatcaataggtgtattgtatgcagctttagcctatttttt 31694203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 441
Target Start/End: Complemental strand, 2838890 - 2838819
Alignment:
Q  370 gctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    |||||||||||||||||||||| |||||  ||||| ||||| |||||||||| ||| ||||||||| |||||    
T  2838890 gctcccgcatacgcagggtccgagaagggatcccaccatttggtgtattgtacgcagccttaccctgttttt 2838819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 442
Target Start/End: Complemental strand, 27328870 - 27328792
Alignment:
Q  366 taaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||||||||||||| |||||||| |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  27328870 taaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 27328792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 363 - 441
Target Start/End: Original strand, 5873338 - 5873416
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    ||||||||||||||||||||||| ||||||| |||||||||| || || ||||| ||||   | |||||||||||||||    
T  5873338 cactaaagctcccgcatacgcagtgtccggggaggagtcccaccaattggtgtagtgtacttagccttaccctattttt 5873416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 440
Target Start/End: Complemental strand, 7368528 - 7368438
Alignment:
Q  350 gggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    |||||||  ||| ||||| ||||||| |||| |||||||||||||||| |||||| || || |||||||||| ||| ||||||||| ||||    
T  7368528 gggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagccttaccctgtttt 7368438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 347 - 442
Target Start/End: Original strand, 13801767 - 13801864
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||  ||| ||||||||||| |||||| || ||||||||||||| |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  13801767 aaagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 13801864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 25622579 - 25622533
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatt 409  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  25622579 cactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 25622533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 410
Target Start/End: Original strand, 10306493 - 10306537
Alignment:
Q  366 taaagctcccgcatacgcagggtccgggaaggagtcccatcattt 410  Q
    |||||||||||||||||||||||||||||||| |||||| |||||    
T  10306493 taaagctcccgcatacgcagggtccgggaaggggtcccaccattt 10306537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 249
Target Start/End: Complemental strand, 10827458 - 10827402
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagtt 249  Q
    ||||||||||||||||| ||||||||||| |||||||| | ||||||| ||||||||    
T  10827458 aaattacatcagaggtcatttaagtttgaggtttgtaataaattggtcctttaagtt 10827402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 17400899 - 17400839
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||| || | |||||||||||||||  ||||||||||||||||| ||||||||||||    
T  17400899 aaattacaccataagtcctttaagtttgagatttgtaacatattggtcatttaagttattt 17400839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 435
Target Start/End: Complemental strand, 22600569 - 22600501
Alignment:
Q  367 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 435  Q
    |||||||||||||||||||| ||||||||||  ||||| ||||| ||||||||||  || |||||||||    
T  22600569 aaagctcccgcatacgcaggatccgggaagggatcccaccatttggtgtattgtacacagccttaccct 22600501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 345 - 397
Target Start/End: Complemental strand, 32354264 - 32354212
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaagg 397  Q
    ||||||||||||  ||| ||||||||||||||||||| |||||||||||||||    
T  32354264 taaaagggcaacccggtgcactaaagctcccgcatacacagggtccgggaagg 32354212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 35461421 - 35461481
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||| ||  |||||||||||||||| |||||||| ||||||||| ||||||||||||    
T  35461421 aaattacaccacgggtcctttaagtttgaggtttgtaatatattggtcctttaagttattt 35461481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 442
Target Start/End: Complemental strand, 1405305 - 1405227
Alignment:
Q  364 actaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||| |||||||||||| ||||||| | |||| | |||||| ||||| |||||||||| |||| ||||| |||||||||    
T  1405305 actagagctcccgcatatgcagggttcaggaaagggtcccaccatttggtgtattgtacgcaaacttactctatttttt 1405227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 404
Target Start/End: Original strand, 16028623 - 16028681
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtccca 404  Q
    |||||||||||  ||| ||||| |||||||||||| |||||||||||||||| ||||||    
T  16028623 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtccca 16028681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 16327157 - 16327203
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  16327157 gtcctttaagtttgaggtttgtaacagattggtcgtttaagttattt 16327203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 25456334 - 25456380
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  25456334 gtcctttaagtttgaggtttgtaacagattggtcctttaagttattt 25456380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 442
Target Start/End: Complemental strand, 3771476 - 3771379
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||| |  ||| ||||||||||||| ||||| ||| ||||||||||| |||||| || || |||||||||   || ||||||||| ||||||    
T  3771476 taaaagggcagcccggtgcactaaagctcccacatacacagagtccgggaaggggtcccaccaattggtgtattgttcacagccttaccctgtttttt 3771379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 28516432 - 28516529
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttag-tgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||| |||| |||||||||||| |||| ||||||||| ||||| | |||||| ||||| | ||||||||| ||| || || ||| ||||||    
T  28516432 aaaagggcaacctggtccactaaagctcctgcatgcgcagggtctgggaatgggtcccaccattttgatgtattgtacgcagccctagcctgtttttt 28516529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 30006464 - 30006372
Alignment:
Q  342 aaataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 435  Q
    |||||||||| ||||  ||| |||||||||||||||||||  |||  ||||||||| |||||| ||||||||||| ||||  || |||||||||    
T  30006464 aaataaaagg-caacccggtgcactaaagctcccgcatacataggccccgggaaggggtcccaccatttagtgtaatgtacacagccttaccct 30006372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 16327083 - 16327143
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||| ||||||||||||||||| || |||||||| | |||| || ||||||||||||    
T  16327083 aaattacaccagaggtcctttaagttagaggtttgtaatagattgatcgtttaagttattt 16327143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 19550356 - 19550312
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttat 251  Q
    |||||| ||||||||||||||||||| |||| |||||||||||||    
T  19550356 gtccttcaagtttgatgtttgtaacagattgatcttttaagttat 19550312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 410
Target Start/End: Original strand, 21784335 - 21784395
Alignment:
Q  350 gggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 410  Q
    |||||||  ||| ||||||| |||||||||||||||||||||| |||| |||||| |||||    
T  21784335 gggcaactcggtgcactaaacctcccgcatacgcagggtccggaaaggggtcccaccattt 21784395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 35461788 - 35461728
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||| ||||||  ||||||||||||||| |||||||| | ||||||| ||||||||||||    
T  35461788 aaattgcatcaggtgtcctttaagtttgaggtttgtaatagattggtcctttaagttattt 35461728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 19550406 - 19550359
Alignment:
Q  206 ggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||||||| |||||||||| |||| || ||||||||||||    
T  19550406 ggtcctttaagtttgaggtttgtaacagattgttcctttaagttattt 19550359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 404
Target Start/End: Complemental strand, 39801653 - 39801594
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtccca 404  Q
    ||||| ||||||  ||| |||||||||||||||||||| |||||| ||||||| ||||||    
T  39801653 taaaatggcaacccggtgcactaaagctcccgcatacgtagggtctgggaaggggtccca 39801594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 12713165 - 12713119
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||||||  ||| |||||||||| |||||||||||||||    
T  12713165 gtcctttaagtttgagatttctaacatattgatcttttaagttattt 12713119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 12774429 - 12774383
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||||||  ||| |||||||||| |||||||||||||||    
T  12774429 gtcctttaagtttgagatttctaacatattgatcttttaagttattt 12774383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 397
Target Start/End: Complemental strand, 13774984 - 13774950
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaagg 397  Q
    |||||||||||||||||||||||||||||| ||||    
T  13774984 cactaaagctcccgcatacgcagggtccggaaagg 13774950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 16327377 - 16327331
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||||| |||||||||| |||| || ||||||||||||    
T  16327377 gtcctttaagtttgaggtttgtaacagattgatcctttaagttattt 16327331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 245
Target Start/End: Complemental strand, 28559578 - 28559536
Alignment:
Q  203 agaggtcctttaagtttgatgtttgtaacatattggtctttta 245  Q
    |||||||||||||||||||||||||||||| ||| ||| ||||    
T  28559578 agaggtcctttaagtttgatgtttgtaacaaattagtccttta 28559536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 442
Target Start/End: Complemental strand, 29334533 - 29334435
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatt-tagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||| |  ||| || ||||| |||| ||||||||||||||||||| | |||||| |||| | |||||||||| ||| ||||||| | ||||||    
T  29334533 taaaagggcagcccggtgcattaaagatcccacatacgcagggtccgggaatgggtcccaccattctggtgtattgtacgcagccttaccttgtttttt 29334435  T

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Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 246
Target Start/End: Complemental strand, 6588200 - 6588140
Alignment:
Q  185 ttttgggaaaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaa 246  Q
    |||||||||||||||| ||| ||||||| | |||||| |||||||| ||||||||| |||||    
T  6588200 ttttgggaaaattacaccag-ggtccttaacgtttgaggtttgtaatatattggtcctttaa 6588140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 427
Target Start/End: Original strand, 12575680 - 12575741
Alignment:
Q  367 aaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaac 427  Q
    |||||||| ||||||||||||||| |||||| |||||| || ||| |||||||||| |||||    
T  12575680 aaagctcctgcatacgcagggtccaggaaggggtcccaccattttggtgtattgtacgcaac 12575741  T

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Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 442
Target Start/End: Complemental strand, 20135740 - 20135644
Alignment:
Q  348 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||  ||| |||| ||||||| ||||| || ||||||||||||| |||||| |||  || |||||||||| ||| ||||||| | ||||||    
T  20135740 aagggcaacccggtgcactgaagctcctgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgtttttt 20135644  T

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Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 410
Target Start/End: Original strand, 21542489 - 21542530
Alignment:
Q  369 agctcccgcatacgcagggtccgggaaggagtcccatcattt 410  Q
    ||||||||||||||||| ||||||||||| |||||| |||||    
T  21542489 agctcccgcatacgcagagtccgggaaggggtcccaccattt 21542530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 404
Target Start/End: Original strand, 30877564 - 30877621
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtccca 404  Q
    ||||||||||  ||| ||||| ||||||| |||| |||||||||||||||| ||||||    
T  30877564 aaagggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtccca 30877621  T

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Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 42924846 - 42924929
Alignment:
Q  363 cactaaagctcccgcatacgcagggt--ccgggaaggagtcccatcattta--gtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||| |||||||||||||||  | |||||||  | |||||||||   |||||||||| ||||||||||||| ||||||    
T  42924846 cactaaagcttccgcatacgcagggtgtctgggaagggattccatcatttttggtgtattgtacgcaaccttaccctgtttttt 42924929  T

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Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 431
Target Start/End: Complemental strand, 1565566 - 1565483
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaacctta 431  Q
    ||||||||||  ||| |||||| |||||| |||| |||||||||||||||| |||||  ||||| ||| |||||| ||| |||||    
T  1565566 aaagggcaacccggtgcactaa-gctcccacatatgcagggtccgggaaggggtcccgccatttggtgcattgtacgcagcctta 1565483  T

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Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 420
Target Start/End: Original strand, 22861666 - 22861742
Alignment:
Q  344 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgt 420  Q
    ||||||||||||   ||| ||||| |||||||||||| ||||||| || ||||| |||||| |||||  ||||||||    
T  22861666 ataaaagggcaattcggtgcactagagctcccgcatatgcagggttcgagaaggggtcccaccatttgatgtattgt 22861742  T

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Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 23662215 - 23662171
Alignment:
Q  209 cctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||| |||||||| | ||||||| ||||||||||||    
T  23662215 cctttaagtttgaggtttgtaataaattggtcctttaagttattt 23662171  T

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Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 23796373 - 23796417
Alignment:
Q  209 cctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||| |||||||| | ||||||| ||||||||||||    
T  23796373 cctttaagtttgaggtttgtaataaattggtcctttaagttattt 23796417  T

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Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 404
Target Start/End: Original strand, 29184062 - 29184118
Alignment:
Q  348 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtccca 404  Q
    |||||||||  ||| |||||||||||||||||||||| |||| |  |||||||||||    
T  29184062 aagggcaacccggtgcactaaagctcccgcatacgcatggtctgacaaggagtccca 29184118  T

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Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 32361153 - 32361213
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||| |||| ||||||||| ||||| |||||||| | |||| || ||||||||||||    
T  32361153 aaattacaccagaagtcctttaaatttgaagtttgtaatagattgatcatttaagttattt 32361213  T

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Target: chr3 (Bit Score: 61; Significance: 5e-26; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 40272811 - 40272907
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||||    
T  40272811 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttt 40272907  T

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Target: chr3; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 346 - 442
Target Start/End: Complemental strand, 54484849 - 54484753
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||| ||||||| | ||||||    
T  54484849 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtttttt 54484753  T

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Target: chr3; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 347 - 440
Target Start/End: Complemental strand, 31593004 - 31592911
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    ||||||||||  ||| ||||| |||||||||||| ||||||||||||||||||||||| ||||| |||||||||| ||| ||||||||| ||||    
T  31593004 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggagtcccaccatttggtgtattgtacgcagccttaccctgtttt 31592911  T

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Target: chr3; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 347 - 440
Target Start/End: Complemental strand, 39203671 - 39203578
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    ||||||||||  ||| |||||||||||||||||| ||| |||||||||||| |||||| ||||| |||||||||| ||||||||||||| ||||    
T  39203671 aaagggcaacccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgtttt 39203578  T

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Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 366 - 442
Target Start/End: Original strand, 8247706 - 8247784
Alignment:
Q  366 taaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||||||||||||||||||||||||||||| |||  || |||||||||| ||||||||||||| ||||||    
T  8247706 taaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtacgcaaccttaccctgtttttt 8247784  T

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Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 45948854 - 45948933
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||||||||||||||||||| ||||| |||||| || || |||||||||| ||| ||||||||||||||||    
T  45948854 cactaaagctcccgcatacgcagggtccgagaaggggtcccaccaattggtgtattgtatgcagccttaccctatttttt 45948933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 363 - 441
Target Start/End: Original strand, 6411838 - 6411916
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    |||||||||||||||||||||| |||| ||||||| |||||||||||| |||||||||| ||| ||||||||| |||||    
T  6411838 cactaaagctcccgcatacgcaaggtctgggaaggggtcccatcatttggtgtattgtacgcagccttaccctgttttt 6411916  T

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Target: chr3; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 344 - 435
Target Start/End: Original strand, 13628787 - 13628880
Alignment:
Q  344 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccct 435  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| |||  || |||||||||| ||| |||||||||    
T  13628787 ataaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct 13628880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 346 - 432
Target Start/End: Original strand, 52926218 - 52926304
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttac 432  Q
    |||||||||||  ||| | ||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||| ||||||    
T  52926218 aaaagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaaggtgtcccaccatttggtgtattgtacgcagccttac 52926304  T

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Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 441
Target Start/End: Complemental strand, 22609921 - 22609828
Alignment:
Q  348 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    |||||||||  ||| |||| ||||||||||||||||| |||||||||||| |||||| ||||| |||||||||| ||| ||||||||| |||||    
T  22609921 aagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 22609828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 346 - 441
Target Start/End: Complemental strand, 26869864 - 26869769
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    |||||||||||  ||| ||| |||||||||||||||||| ||||||| |||| |||||| ||||| |||||||||| ||| ||||||||| |||||    
T  26869864 aaaagggcaacccggtgcaccaaagctcccgcatacgcatggtccggcaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 26869769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 346 - 440
Target Start/End: Complemental strand, 1217246 - 1217152
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    |||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||  ||||| |||||||||| ||| ||||||||| ||||    
T  1217246 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccgccatttggtgtattgtacgcagccttaccctgtttt 1217152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 346 - 440
Target Start/End: Complemental strand, 15797378 - 15797284
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    |||||||||||  ||| ||||| ||||||| |||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  15797378 aaaagggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 15797284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 346 - 440
Target Start/End: Original strand, 34771363 - 34771457
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    ||||||||| |  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  34771363 aaaagggcagcccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 34771457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 344 - 441
Target Start/End: Complemental strand, 16735600 - 16735503
Alignment:
Q  344 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    |||||||||||||   || |||| ||||| |||||||||||| ||||||||||| |||||| ||||| |||||||||| ||| ||||||||| |||||    
T  16735600 ataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 16735503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 349 - 442
Target Start/End: Complemental strand, 26573282 - 26573189
Alignment:
Q  349 agggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||| | |||| ||||||||||| |||||||||||||||||||| || |||||| || || |||||||||| ||| ||||||||| ||||||    
T  26573282 agggcagcctggtgcactaaagctcacgcatacgcagggtccgggatggggtcccaccaattggtgtattgtacgcagccttaccctgtttttt 26573189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 440
Target Start/End: Original strand, 22122918 - 22123010
Alignment:
Q  348 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    |||||||||  ||| ||||| ||||| |||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  22122918 aagggcaacccggtgcactagagctctcgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 22123010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 345 - 421
Target Start/End: Original strand, 25517168 - 25517244
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgta 421  Q
    ||||||||||||  ||| |||||||||||| ||||||||||| |||||||||| |||||| ||||| ||||||||||    
T  25517168 taaaagggcaacccggtgcactaaagctccagcatacgcaggatccgggaaggggtcccaccattttgtgtattgta 25517244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 345 - 442
Target Start/End: Original strand, 29366718 - 29366817
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||   || ||||||||||||| ||||||||||||||||||||| |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  29366718 taaaagggcaacccagtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 29366817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 347 - 435
Target Start/End: Original strand, 10795423 - 10795513
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttaccct 435  Q
    |||||||||| |||| |||| ||||||||||||||||||||||| |||||| |||||| ||  ||| |||||||||| ||| |||||||||    
T  10795423 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccct 10795513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 366 - 442
Target Start/End: Original strand, 46421054 - 46421132
Alignment:
Q  366 taaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||||||||||||||||||||||| |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  46421054 taaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 46421132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 364 - 442
Target Start/End: Original strand, 54374362 - 54374441
Alignment:
Q  364 actaaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||||||| |||||||||||||||| |||||| || ||| ||| |||||| ||| ||||||||||||||||    
T  54374362 actaaagctcccgcatatgcagggtccgggaaggggtcccaccattttggtggattgtacgcagccttaccctatttttt 54374441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 347 - 442
Target Start/End: Original strand, 45786214 - 45786311
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||  ||| |||||||||||| |||| ||||||||||||||||| |||||| ||  ||| |||||||||| ||| ||||||||| ||||||    
T  45786214 aaagggcaacccggtgcactaaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttt 45786311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 349 - 442
Target Start/End: Original strand, 353351 - 353446
Alignment:
Q  349 agggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||  ||| |||||||||||||||||| || ||||||||||||| |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  353351 agggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 353446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 13730601 - 13730699
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||| |||||||||||||||||| || ||||||||||||| |||||| |||  || ||||||||||  || ||||||||| ||||||    
T  13730601 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgtttttt 13730699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 49013472 - 49013570
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||| ||||||||||||||| || || ||||||||||||| |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  49013472 aaaagggcaacccggtgcactaaagctcccgcgtatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 49013570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 360 - 410
Target Start/End: Complemental strand, 10300635 - 10300585
Alignment:
Q  360 gtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 410  Q
    ||||| ||||||||||||||||| |||||| ||||||||||||||||||||    
T  10300635 gtacattaaagctcccgcatacgtagggtctgggaaggagtcccatcattt 10300585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 344 - 402
Target Start/End: Original strand, 10484613 - 10484671
Alignment:
Q  344 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcc 402  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||| |||||| ||||    
T  10484613 ataaaagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcc 10484671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 346 - 403
Target Start/End: Complemental strand, 516570 - 516513
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtccc 403  Q
    |||||||||||  ||| ||||||||||||||||||||||||||| ||||||| |||||    
T  516570 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtcggggaaggggtccc 516513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 346 - 432
Target Start/End: Original strand, 5173718 - 5173806
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttac 432  Q
    |||||||||||  ||| |||||||||||||||||||||| |||||||||||| | |||| ||  ||| |||||||| | ||||||||||    
T  5173718 aaaagggcaacccggtgcactaaagctcccgcatacgcaaggtccgggaaggggccccaccatttttggtgtattgcatgcaaccttac 5173806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 442
Target Start/End: Original strand, 12914033 - 12914130
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||  ||| || | ||||||||||||| |||||||| ||||||| ||| || ||||| |||||||||| ||  ||||||||| ||||||    
T  12914033 taaaagggcaacccggtgcattgaagctcccgcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgccgccttaccctgtttttt 12914130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 346 - 395
Target Start/End: Complemental strand, 47624257 - 47624208
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaa 395  Q
    |||||||||||  ||| |||||||||||||||||||||||||||||||||    
T  47624257 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 47624208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 53996564 - 53996661
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||| |  ||| ||||||||||||| ||||||||| ||| ||||||| |||||| || ||| |||||||||| ||| ||||||||| ||||||    
T  53996564 aaaagggcagcccggtgcactaaagctcccacatacgcagtgtcagggaaggggtcccaccattttggtgtattgtaagcagccttaccctgtttttt 53996661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 442
Target Start/End: Complemental strand, 9276401 - 9276326
Alignment:
Q  366 taaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||| |||||||||||||||||||||||| | || ||| ||||| |||||||||| ||| ||||||||| ||||||    
T  9276401 taaagttcccgcatacgcagggtccgggaaagggt-ccaccatttggtgtattgtacgcagccttaccctgtttttt 9276326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 24851300 - 24851364
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 410  Q
    |||||||||||  ||| |||||||||||||||||| ||||| |||||||||| |||||| |||||    
T  24851300 aaaagggcaacccggtgcactaaagctcccgcatatgcaggatccgggaaggggtcccaccattt 24851364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 404
Target Start/End: Complemental strand, 30452955 - 30452895
Alignment:
Q  344 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtccca 404  Q
    |||||||||||||  ||| ||||| |||||||||||| |||||||||||||||| ||||||    
T  30452955 ataaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtccca 30452895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 34420659 - 34420739
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||| |||||||| |||||||||||| |||||| || ||| |||||| ||| ||| ||||||||| ||||||    
T  34420659 cactaaagctcccacatacgcaaggtccgggaaggggtcccaccattttggtgtatggtacgcagccttaccctgtttttt 34420739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 39541521 - 39541461
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||| |||||||||||||||| |||||||||  |||| || ||||||||||||    
T  39541521 aaattacatcaggggtcctttaagtttgaggtttgtaacggattgatcctttaagttattt 39541461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 47573680 - 47573740
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||  |||||||||||||||| |||||||||||||| ||| ||||| ||||||    
T  47573680 aaattacatcatgggtcctttaagtttgaggtttgtaacatattagtcctttaaattattt 47573740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 421
Target Start/End: Complemental strand, 24578083 - 24578008
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgta 421  Q
    |||||||||||  ||| ||||| || ||||||||| | |||||| ||||| |||||||| ||||||||||||||||    
T  24578083 aaaagggcaacccggtgcactagagttcccgcatatgtagggtctgggaaagagtcccaccatttagtgtattgta 24578008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 194 - 253
Target Start/End: Complemental strand, 26976587 - 26976528
Alignment:
Q  194 aattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||| ||||||||||||||||  ||||||||||||  ||| ||||||||||||    
T  26976587 aattacatcaggggtcctttaagtttgagctttgtaacatataagtcctttaagttattt 26976528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 194 - 253
Target Start/End: Complemental strand, 28814149 - 28814090
Alignment:
Q  194 aattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||| |||||||||| ||||| |||||||| | ||| ||||||||||||||||    
T  28814149 aattacatcaggggtcctttaaatttgaggtttgtaatagattagtcttttaagttattt 28814090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 253
Target Start/End: Original strand, 47069526 - 47069573
Alignment:
Q  206 ggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||| ||||| |||||||||||||||||| ||||||||||||    
T  47069526 ggtcctttaaatttgaggtttgtaacatattggtcctttaagttattt 47069573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 441
Target Start/End: Complemental strand, 47624167 - 47624104
Alignment:
Q  378 atacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    |||| ||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| |||||    
T  47624167 atacacagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 47624104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 432
Target Start/End: Original strand, 829458 - 829528
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttac 432  Q
    |||||||||||| ||||||||||||| |||||||| |||||| || ||| |||||||||| ||||| ||||    
T  829458 cactaaagctcctgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgcaactttac 829528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 14987100 - 14987019
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||||||||| ||| |||||||||| | |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  14987100 cactaaagctcccgcatatgcaaggtccgggaatgggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 14987019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 32186751 - 32186705
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||||| ||||||||||||||| | |||||||||||||    
T  32186751 gtcctttaagtttgaggtttgtaacatattgatgttttaagttattt 32186705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 40286525 - 40286479
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||||| |||||||||| ||||||||||| ||||||||    
T  40286525 gtcctttaagtttgaggtttgtaacagattggtcttttgagttattt 40286479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 50332771 - 50332725
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||||||||||||||| | |||| |||||||||||||||    
T  50332771 gtcctttaagtttgatgtttgtaataaattgatcttttaagttattt 50332725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 13903081 - 13903036
Alignment:
Q  208 tcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||| ||| |||||||||||||| ||||||||||||||||    
T  13903081 tcctttaagtctgaggtttgtaacatattagtcttttaagttattt 13903036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 423
Target Start/End: Original strand, 43114884 - 43114944
Alignment:
Q  363 cactaaagctcccgcatacgca-gggtccgggaaggagtcccatcatttagtgtattgtagg 423  Q
    |||||||||||||||||||||| |||||| |||||| |||||| ||||| ||||||||||||    
T  43114884 cactaaagctcccgcatacgcaggggtccaggaagg-gtcccaccatttggtgtattgtagg 43114944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 54032569 - 54032614
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtcc 390  Q
    ||||||||||||  ||| ||||||||||||||||||||||||||||    
T  54032569 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtcc 54032614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 390
Target Start/End: Original strand, 4495675 - 4495719
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtcc 390  Q
    |||||||||||  ||| ||||||||||||||||||||||||||||    
T  4495675 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtcc 4495719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 25944628 - 25944564
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 410  Q
    ||||||||| | |||| | ||||||||||| ||||||||||||| ||||||| |||||| |||||    
T  25944628 aaaagggcagcctggtgcgctaaagctcccacatacgcagggtcagggaaggggtcccaccattt 25944564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 32186448 - 32186507
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||| ||||||| |||||||||||||||| |||||||| ||||||||| |||||| |||||    
T  32186448 aaataacatcag-ggtcctttaagtttgaggtttgtaatatattggtcctttaagctattt 32186507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 205 - 253
Target Start/End: Original strand, 45131436 - 45131484
Alignment:
Q  205 aggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||||||| |||||||||| |||| || ||||||||||||    
T  45131436 aggtcctttaagtttgaggtttgtaacagattgatcatttaagttattt 45131484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 47891472 - 47891412
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||  ||||||||||||||||  ||||||||| |||| || ||||||||||||    
T  47891472 aaattacatcaagggtcctttaagtttgaaatttgtaacaaattgatcctttaagttattt 47891412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 3377014 - 3377069
Alignment:
Q  194 aattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagtt 249  Q
    ||||||| || ||||||||||||||||| |||||||||| || |||| ||||||||    
T  3377014 aattacaccacaggtcctttaagtttgacgtttgtaacagataggtcctttaagtt 3377069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 7943131 - 7943052
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||||||||||||| |||| || ||||  ||||| |||||  ||||||||| |||  |||||||| ||||||    
T  7943131 cactaaagctcccgcatacgcatggtctggaaagggatcccaccatttgatgtattgtacgcagtcttaccctgtttttt 7943052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 441
Target Start/End: Complemental strand, 33926224 - 33926145
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatt-tagtgtattgtaggcaaccttaccctattttt 441  Q
    ||||||||||| |||||| ||||||||| |||||| |||||| |||| | ||||||||||  || ||||||||| |||||    
T  33926224 cactaaagctctcgcatatgcagggtccaggaaggggtcccaccattatggtgtattgtacacagccttaccctgttttt 33926145  T

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Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 7607759 - 7607718
Alignment:
Q  211 tttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||||||||||||||||| | |||||||||||||    
T  7607759 tttaagtttgatgtttgtaacatattgat-ttttaagttattt 7607718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 14964889 - 14964934
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  14964889 gtcctttaagtttga-gtttgtaacagattggtcatttaagttattt 14964934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 26976371 - 26976421
Alignment:
Q  203 agaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||||||||| |||||||||| || |||| | ||||||||||    
T  26976371 agaggtcctttaagtttgaggtttgtaacagataggtcctctaagttattt 26976421  T

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Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 442
Target Start/End: Complemental strand, 33235687 - 33235594
Alignment:
Q  348 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||| |||| |||||||||| ||||||||| | |||| | || || |||||| ||||||||||||||||  ||  |||||||| ||||||    
T  33235687 aagggcaacctggtgcactaaagcttccgcatacgtaaggtctgcgaggg-gtcccaccatttagtgtattgtacacagtcttaccctgtttttt 33235594  T

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Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 40286297 - 40286343
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||||| |||| |||||||||| || ||||||||||||    
T  40286297 gtcctttaagtttgaggtttataacatattgttcctttaagttattt 40286343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 388
Target Start/End: Complemental strand, 40390399 - 40390357
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggt 388  Q
    |||||||||||  ||| ||||||||||||||||||||||||||    
T  40390399 aaaagggcaacccggtgcactaaagctcccgcatacgcagggt 40390357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 47069808 - 47069766
Alignment:
Q  206 ggtcctttaagtttgatgtttgtaacatattggtcttttaagt 248  Q
    |||||||||||||||| |||||||||| ||||||| |||||||    
T  47069808 ggtcctttaagtttgaggtttgtaacagattggtcatttaagt 47069766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 47891398 - 47891352
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||| ||||||| ||||| |||||||||||| ||||||||||||    
T  47891398 gtcctttgagtttgaggtttgcaacatattggtcctttaagttattt 47891352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 440
Target Start/End: Original strand, 50624952 - 50625046
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    ||||||||| |  ||| ||||||||||||| | ||||||||| || |||||| |||||| ||  | |||||||||| || |||||||||| ||||    
T  50624952 aaaagggcagcccggtgcactaaagctcccacttacgcagggcccaggaaggcgtcccaccaaatggtgtattgtacgctaccttaccctttttt 50625046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 442
Target Start/End: Complemental strand, 9607345 - 9607265
Alignment:
Q  364 actaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||||||| || ||||| ||||||| |||||| |||  || ||||||| || ||| ||||||||| ||||||    
T  9607345 actaaagctcccgcatatgcggggtctgggaaggggtcccaacattattggtgtattctacgcagccttaccctgtttttt 9607265  T

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Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 3382552 - 3382500
Alignment:
Q  194 aattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaa 246  Q
    |||||||||| |||| |||||||||||| |||||||||| || |||| |||||    
T  3382552 aattacatcacaggttctttaagtttgacgtttgtaacagataggtcctttaa 3382500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 239
Target Start/End: Original strand, 5442124 - 5442156
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggt 239  Q
    |||||||||||||||||||| ||||||||||||    
T  5442124 gtcctttaagtttgatgtttataacatattggt 5442156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 21696659 - 21696600
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||| |||||||||||||| | |||||| ||| ||||||  ||||||||||||    
T  21696659 aaattacatcag-ggtcctttaagtttcacgtttgtgacaaattggtactttaagttattt 21696600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 25848272 - 25848332
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||| ||||| ||||||||||||||  ||||||| | |||| || ||||||||||||    
T  25848272 aaattacaccagagatcctttaagtttgagatttgtaataaattgatcctttaagttattt 25848332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 28905086 - 28905042
Alignment:
Q  361 tacactaaagctcccgcatacgcagggtccgggaaggagtcccat 405  Q
    |||||||||| |||||| ||||||||||||||||| | |||||||    
T  28905086 tacactaaagttcccgcttacgcagggtccgggaaagggtcccat 28905042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 396
Target Start/End: Original strand, 45288056 - 45288104
Alignment:
Q  348 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaag 396  Q
    ||||||| | |||| |||||||||||  |||||||||||||||||||||    
T  45288056 aagggcagcctggtgcactaaagctcttgcatacgcagggtccgggaag 45288104  T

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Target: chr2 (Bit Score: 61; Significance: 5e-26; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 346 - 442
Target Start/End: Complemental strand, 10546299 - 10546203
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||||    
T  10546299 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttt 10546203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 345 - 440
Target Start/End: Complemental strand, 9671316 - 9671221
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    ||||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  9671316 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 9671221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 343 - 440
Target Start/End: Original strand, 21779257 - 21779354
Alignment:
Q  343 aataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    ||||||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||||||||||||| ||||    
T  21779257 aataaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgtttt 21779354  T

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Target: chr2; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 344 - 435
Target Start/End: Original strand, 8455313 - 8455404
Alignment:
Q  344 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 435  Q
    |||||||||||||  ||| |||||||||||| |||||||||||||||||||||| |||||| ||||| |||||||||| ||| |||||||||    
T  8455313 ataaaagggcaacccggtgcactaaagctccggcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct 8455404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 346 - 441
Target Start/End: Complemental strand, 14444864 - 14444769
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||| |||  || ||||||||| |||||    
T  14444864 aaaagggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtatcgtacacagccttaccctgttttt 14444769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 347 - 442
Target Start/End: Complemental strand, 10543835 - 10543738
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| ||  ||| |||||||||| ||| ||||||||| ||||||    
T  10543835 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttt 10543738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 346 - 440
Target Start/End: Complemental strand, 36871627 - 36871534
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    |||||||||||  ||| |||||||||||||||||||||||| |||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  36871627 aaaagggcaacccggtgcactaaagctcccgcatacgcagg-tccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 36871534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 346 - 442
Target Start/End: Complemental strand, 17896396 - 17896300
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  | | ||||||||||||| ||||||||||||||| ||||| |||||| ||||| || ||||||| ||| ||||||||||||||||    
T  17896396 aaaagggcaactcgatgcactaaagctcccacatacgcagggtccgagaaggggtcccaccatttggtatattgtacgcagccttaccctatttttt 17896300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 347 - 442
Target Start/End: Complemental strand, 14530455 - 14530358
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| |||  || |||||||||| | | ||||||||| ||||||    
T  14530455 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgtagccttaccctgtttttt 14530358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 346 - 435
Target Start/End: Original strand, 25249737 - 25249826
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 435  Q
    |||||||||||  ||| ||||||||||| |||||||||||||| ||||||||  ||||| ||||| |||||||||| ||| |||||||||    
T  25249737 aaaagggcaacccggtgcactaaagctcacgcatacgcagggttcgggaagggatcccaccatttggtgtattgtacgcagccttaccct 25249826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 345 - 442
Target Start/End: Complemental strand, 5841167 - 5841068
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||  ||| |||||||||||||||||| || ||||||||||||| |||||| |||  ||  ||||||||| ||| ||||||||||||||||    
T  5841167 taaaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattgatgtattgtacgcatccttaccctatttttt 5841068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 432
Target Start/End: Complemental strand, 11514573 - 11514486
Alignment:
Q  344 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttac 432  Q
    ||||||||||||   ||| ||||||||||||||||||||||||||| ||||||| |||||| ||||| |||||||||| ||| ||||||    
T  11514573 ataaaagggcaatccggtgcactaaagctcccgcatacgcagggtctgggaagg-gtcccaccatttggtgtattgtacgcagccttac 11514486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 358 - 442
Target Start/End: Original strand, 19977725 - 19977809
Alignment:
Q  358 tggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||| ||||||||||||||||||| || ||| ||||||||  ||||| ||||| |||||||||| ||||||||| ||||||||||    
T  19977725 tggtgcactaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgcaaccttatcctatttttt 19977809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 442
Target Start/End: Original strand, 26684639 - 26684715
Alignment:
Q  366 taaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||||||||||||| |||||||  |||||| |||||||| ||||||| ||| ||||||| ||||||||    
T  26684639 taaagctcccgcatacgcagggttcgggaagaggtcccaccatttagtatattgtacgcagccttaccatatttttt 26684715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 442
Target Start/End: Original strand, 31821362 - 31821438
Alignment:
Q  366 taaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||||||| |||| | ||| |||| |||||||||||| ||||||||||  |||||||||||||||||||    
T  31821362 taaagctcccgcatacacaggtttcggaaaggggtcccatcatttggtgtattgtacacaaccttaccctatttttt 31821438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 33847785 - 33847725
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||  ||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  33847785 aaattacactagaggtcctttaagtttgatgtttgtaacatattgttcctttaagttattt 33847725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 5009523 - 5009468
Alignment:
Q  194 aattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagtt 249  Q
    ||||||||||  |||||||||||||||| |||||||||||||||||||||||||||    
T  5009523 aattacatcatgggtcctttaagtttgaggtttgtaacatattggtcttttaagtt 5009468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 24890530 - 24890451
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||| |||||||||||||||||||||| |||||| || || |||||||||| ||| ||||||| | ||||||    
T  24890530 cactaaagctcctgcatacgcagggtccgggaaggggtcccaccaattggtgtattgtatgcagccttaccttgtttttt 24890451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 347 - 442
Target Start/End: Original strand, 25079717 - 25079812
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||  ||| |||||||||||  |||||||||||||||||||||| |||||| ||||  |||||||||| ||| ||||||| | ||||||    
T  25079717 aaagggcaacccggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcatccttaccttgtttttt 25079812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 347 - 442
Target Start/End: Complemental strand, 25632644 - 25632549
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||  ||| |||||||||||||||||||| | ||| ||||||||| ||||| ||||| |||||||||| ||| ||||| ||| ||||||    
T  25632644 aaagggcaacccggtgcactaaagctcccgcatacgtaaggttcgggaaggaatcccaccatttggtgtattgtacgcagccttatcctgtttttt 25632549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 358 - 441
Target Start/End: Complemental strand, 30826159 - 30826077
Alignment:
Q  358 tggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    |||| |||||||||||||||||| | |||||| ||||||| || ||| ||||| |||||||||| |||||||||||||||||||    
T  30826159 tggtgcactaaagctcccgcatatgtagggtctgggaagg-gttccaccatttggtgtattgtacgcaaccttaccctattttt 30826077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 433
Target Start/End: Original strand, 13245096 - 13245181
Alignment:
Q  348 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttacc 433  Q
    |||||||||  | |||||||||||||||| ||| ||| |||||||||||| |||||| ||||||||||| |||| ||| |||||||    
T  13245096 aagggcaacccgatacactaaagctcccgtatatgcatggtccgggaaggggtcccaccatttagtgtaatgtacgcagccttacc 13245181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 347 - 440
Target Start/End: Complemental strand, 23397899 - 23397806
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    ||||||||||  ||| ||||| |||||||||||| | |||||||| ||||| |||||| ||||| |||||||||| | | ||||||||||||||    
T  23397899 aaagggcaacccggtgcactagagctcccgcatatgtagggtccgagaaggggtcccaccatttggtgtattgtacgtagccttaccctatttt 23397806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 23488623 - 23488555
Alignment:
Q  342 aaataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 410  Q
    ||||||||| |||||  ||| ||||||||||| ||||||||||||||||||||||| |||||| |||||    
T  23488623 aaataaaagagcaacccggtgcactaaagctctcgcatacgcagggtccgggaaggggtcccaccattt 23488555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 442
Target Start/End: Original strand, 4516363 - 4516446
Alignment:
Q  359 ggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||||| || ||||||||||||||||||||| |||||| || || |||||||||| ||| | || |||| ||||||    
T  4516363 ggtacactaaagcttccacatacgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagcgttgccctgtttttt 4516446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 347 - 402
Target Start/End: Complemental strand, 8576030 - 8575975
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcc 402  Q
    |||||||||| |||| ||||||||||||| ||||||||||||||||||||| ||||    
T  8576030 aaagggcaacctggtgcactaaagctcccacatacgcagggtccgggaaggggtcc 8575975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 347 - 402
Target Start/End: Complemental strand, 14544201 - 14544146
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcc 402  Q
    |||||||||| |||| |||||||||||||||||||||||||||| |||||| ||||    
T  14544201 aaagggcaacttggtgcactaaagctcccgcatacgcagggtcccggaaggggtcc 14544146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 344 - 395
Target Start/End: Complemental strand, 22371250 - 22371199
Alignment:
Q  344 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaa 395  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||    
T  22371250 ataaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 22371199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 442
Target Start/End: Original strand, 32781308 - 32781383
Alignment:
Q  367 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||||| ||||||| ||||||| |||||| ||||| |||||||||| |||  |||||||| ||||||    
T  32781308 aaagctcccgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgtttttt 32781383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 347 - 434
Target Start/End: Original strand, 40762234 - 40762321
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccc 434  Q
    ||||||||||  ||| ||||||||||||| |||||||||||||| |||| | |||||| ||||| |||||||||| | | ||||||||    
T  40762234 aaagggcaacccggtgcactaaagctcccacatacgcagggtccaggaaagggtcccaccatttggtgtattgtacgtagccttaccc 40762321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 346 - 435
Target Start/End: Complemental strand, 17668138 - 17668049
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 435  Q
    |||||||||||  ||| |||||||||||||  ||||||||||| || ||||| || ||| ||||| |||||||||| ||| |||||||||    
T  17668138 aaaagggcaacccggtgcactaaagctcccatatacgcagggttcgagaaggggttccaccatttggtgtattgtacgcagccttaccct 17668049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 440
Target Start/End: Complemental strand, 25641620 - 25641543
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    ||||||||||| |||||||||||| | |||||||| ||||||  |||| |||||||||| ||||| ||||||| ||||    
T  25641620 cactaaagctctcgcatacgcaggattcgggaaggggtcccacaatttggtgtattgtacgcaactttaccctgtttt 25641543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 364 - 442
Target Start/End: Original strand, 31158456 - 31158536
Alignment:
Q  364 actaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||||||||||||||||| ||||||| |||||| ||  ||| || ||||||| |||| |||||||| ||||||    
T  31158456 actaaagctcccgcatacgcagggtctgggaaggggtcccaccatttttggtttattgtatgcaatcttaccctgtttttt 31158536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 404
Target Start/End: Complemental strand, 34766374 - 34766333
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtccca 404  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  34766374 cactaaagctcccgcatacgcagggtccgggaaggggtccca 34766333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 442
Target Start/End: Original strand, 39914304 - 39914400
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||  | | |||||||||||||||||||||||||| | |||||| |||||| ||||  ||||||||||  || ||||||||| ||||||    
T  39914304 taaaagggcaacccgatgcactaaagctcccgcatacgcagggt-caggaaggggtcccaccattcggtgtattgtacacatccttaccctgtttttt 39914400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 442
Target Start/End: Complemental strand, 44643660 - 44643563
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||| |  ||| |||||| |||||||||||||||||||| ||||||| |||||| ||||| ||  |||||| ||| |||||| || ||||||    
T  44643660 taaaagggcagcccggtgcactaaggctcccgcatacgcagggtctgggaaggggtcccaccatttggtacattgtacgcagccttactctgtttttt 44643563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 435
Target Start/End: Original strand, 17380257 - 17380325
Alignment:
Q  367 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 435  Q
    ||||||||||||| |||||||||| |||||| || ||||||||| |||||||| |  ||||||||||||    
T  17380257 aaagctcccgcatccgcagggtccaggaaggggttccatcatttggtgtattgcacacaaccttaccct 17380325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 404
Target Start/End: Complemental strand, 34080239 - 34080179
Alignment:
Q  344 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtccca 404  Q
    |||||||||||||  ||| ||||||| |||||||||| |||||||||||||||| ||||||    
T  34080239 ataaaagggcaacccggtgcactaaaactcccgcatatgcagggtccgggaaggggtccca 34080179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 404
Target Start/End: Original strand, 40579750 - 40579806
Alignment:
Q  348 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtccca 404  Q
    |||||||||  ||| ||||||||||||||||||| ||||||||||||||| ||||||    
T  40579750 aagggcaacccggtgcactaaagctcccgcatactcagggtccgggaaggggtccca 40579806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 418
Target Start/End: Original strand, 45235820 - 45235888
Alignment:
Q  350 gggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtatt 418  Q
    ||||||| ||||||||||||||||| ||||||| |||||| || |||| |||||| ||||| |||||||    
T  45235820 gggcaacttggtacactaaagctcctgcatacgtagggtctggtaaggggtcccaccattttgtgtatt 45235888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 441
Target Start/End: Original strand, 12023950 - 12024013
Alignment:
Q  378 atacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    ||||||||||||||||| || |||||| ||||| |||||||||| ||| ||||||||| |||||    
T  12023950 atacgcagggtccgggagggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 12024013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 367 - 442
Target Start/End: Original strand, 21377093 - 21377168
Alignment:
Q  367 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||| |||||||||||| |||||||| |||||| ||||| ||| ||||||  || ||||||||| ||||||    
T  21377093 aaagctcccacatacgcagggttcgggaaggggtcccaccatttggtgcattgtacccagccttaccctgtttttt 21377168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 441
Target Start/End: Complemental strand, 22371158 - 22371095
Alignment:
Q  378 atacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    |||| ||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| |||||    
T  22371158 atacacagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 22371095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 24200622 - 24200720
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||| ||||||||||| | ||||| |||||||||||||||  ||||| ||  ||| |||||||||| ||| ||||||||| ||||||    
T  24200622 aaaagggcaacccggtgcactaaagctctcacatactcagggtccgggaagggttcccaccatttttggtgtattgtacgcagccttaccctgtttttt 24200720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 430
Target Start/End: Original strand, 99278 - 99348
Alignment:
Q  360 gtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaacctt 430  Q
    |||||||||||||||||||||| ||||||| | ||||| || ||| ||||| |||||||||| ||| ||||    
T  99278 gtacactaaagctcccgcatacacagggtctgagaaggggttccaccatttggtgtattgtacgcagcctt 99348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 418
Target Start/End: Original strand, 24059009 - 24059067
Alignment:
Q  360 gtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtatt 418  Q
    |||||||||||||||| |||||||||||||||| |||| |||||| ||| | |||||||    
T  24059009 gtacactaaagctcccacatacgcagggtccggaaaggggtcccaccatatggtgtatt 24059067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 421
Target Start/End: Original strand, 24860004 - 24860062
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgta 421  Q
    ||||||||||||||||||||||||||||| ||||| || | | ||||| ||||||||||    
T  24860004 cactaaagctcccgcatacgcagggtccgagaaggggttctaccatttggtgtattgta 24860062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 25895254 - 25895208
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  25895254 gtcctttaagtttgaggtttgtaacagattggtcctttaagttattt 25895208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 417
Target Start/End: Complemental strand, 31525829 - 31525771
Alignment:
Q  359 ggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtat 417  Q
    |||||||||||||||||||||| |||||||| || || | |||||||||||| ||||||    
T  31525829 ggtacactaaagctcccgcatatgcagggtctggcaaagggtcccatcatttggtgtat 31525771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 435
Target Start/End: Complemental strand, 17623700 - 17623611
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 435  Q
    |||||||||||   || |||||||||| || |||||||||| | |||||||| || ||| ||||| |||||||||| ||| |||||||||    
T  17623700 aaaagggcaacccagtgcactaaagcttccacatacgcaggattcgggaaggggttccaccatttggtgtattgtacgcagccttaccct 17623611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 192 - 249
Target Start/End: Original strand, 44556509 - 44556566
Alignment:
Q  192 aaaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagtt 249  Q
    ||||||| |||||||||||||||||||| | |||||||| | ||||||| ||||||||    
T  44556509 aaaattatatcagaggtcctttaagtttaaggtttgtaatagattggtcatttaagtt 44556566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 124930 - 124962
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaa 395  Q
    |||||||||||||||||||||||||||||||||    
T  124930 cactaaagctcccgcatacgcagggtccgggaa 124962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 4189105 - 4189045
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||| | ||| ||||||||||| |||||||| |||| |||| ||||||||||||    
T  4189105 aaattacatcaaacgtcttttaagtttgaggtttgtaatatataggtcctttaagttattt 4189045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 9500890 - 9500950
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||| ||| |||||||||||||| | || ||||||| ||||||| ||||||||||||    
T  9500890 aaattacaccaggggtcctttaagttttaggtctgtaacagattggtcctttaagttattt 9500950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 14166539 - 14166479
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||  ||| |||||||||||||||||||| | || |||| ||||||||||||    
T  14166539 aaattacatcaggtgtcatttaagtttgatgtttgtaatagataggtcctttaagttattt 14166479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 410
Target Start/End: Complemental strand, 4794921 - 4794874
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 410  Q
    ||||| |||||||||||| ||||| |||||||||| ||||||||||||    
T  4794921 cactagagctcccgcatatgcaggatccgggaaggggtcccatcattt 4794874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 5009448 - 5009405
Alignment:
Q  210 ctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||| ||||||||||||||| || ||||||||||||    
T  5009448 ctttaagtttgaggtttgtaacatattgatcctttaagttattt 5009405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 253
Target Start/End: Original strand, 25894963 - 25895010
Alignment:
Q  206 ggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||||||  ||||||||| ||||||| ||||||||||||    
T  25894963 ggtcctttaagtttgagatttgtaacaaattggtcctttaagttattt 25895010  T

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Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 441
Target Start/End: Original strand, 39499241 - 39499324
Alignment:
Q  358 tggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    |||| |||||||||||||||||||||||| | ||  ||||  ||||| |||||  ||||||||| ||| | |||||||||||||    
T  39499241 tggtgcactaaagctcccgcatacgcaggattcgaaaagggatcccaccatttgatgtattgtacgcagctttaccctattttt 39499324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 404
Target Start/End: Complemental strand, 41409995 - 41409940
Alignment:
Q  349 agggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtccca 404  Q
    ||||||||  ||| |||| ||||||||||||| |||||||||||||||| ||||||    
T  41409995 agggcaacccggtgcactgaagctcccgcatatgcagggtccgggaaggggtccca 41409940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 43699518 - 43699471
Alignment:
Q  206 ggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||||||| ||||||||||||||| || ||||| ||||||    
T  43699518 ggtcctttaagtttgaggtttgtaacatattgatcctttaatttattt 43699471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 397
Target Start/End: Original strand, 3633708 - 3633758
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaagg 397  Q
    ||||||||||  ||| |||||||||||||||||| || |||||||||||||    
T  3633708 aaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaagg 3633758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 410
Target Start/End: Original strand, 19185760 - 19185806
Alignment:
Q  364 actaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 410  Q
    ||||||||||||||||||||||||||| |||||| || ||| |||||    
T  19185760 actaaagctcccgcatacgcagggtccaggaaggggttccaccattt 19185806  T

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Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 402
Target Start/End: Complemental strand, 19615118 - 19615073
Alignment:
Q  357 atggtacactaaagctcccgcatacgcagggtccgggaaggagtcc 402  Q
    ||||| |||||||||||| ||||||||||||| |||||||| ||||    
T  19615118 atggtgcactaaagctcctgcatacgcagggttcgggaaggggtcc 19615073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 29379970 - 29379925
Alignment:
Q  208 tcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||||| |||||||||||||| ||| ||||| ||||||    
T  29379970 tcctttaagtttgacgtttgtaacatattagtcctttaaattattt 29379925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 5e-26; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 46247952 - 46248048
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| |||  |||||||| ||||||    
T  46247952 aaaagggcaacccggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgtttttt 46248048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 347 - 442
Target Start/End: Complemental strand, 4349796 - 4349701
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||||    
T  4349796 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttt 4349701  T

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Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 344 - 440
Target Start/End: Original strand, 34725095 - 34725191
Alignment:
Q  344 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    |||||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| |||||||||||||||| ||| ||||||||| ||||    
T  34725095 ataaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttagtgtattgtacgcagccttaccctgtttt 34725191  T

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Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 23768336 - 23768415
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||||||||||||||||| ||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||||    
T  23768336 cactaaagctcccgcatacgcagggtctgggaaggtgtcccaccatttggtgtattgtacgcagccttaccctgtttttt 23768415  T

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Target: chr1; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 343 - 442
Target Start/End: Complemental strand, 10668389 - 10668288
Alignment:
Q  343 aataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttt 440  Q
    ||||||||||||||  ||| ||||||||||||||||||||||||| ||||||||| |||||| |||  || |||||||||| ||||||||||| | ||||    
T  10668389 aataaaagggcaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccttgtttt 10668290  T
Q  441 tt 442  Q
    ||    
T  10668289 tt 10668288  T

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Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 344 - 421
Target Start/End: Complemental strand, 27474441 - 27474364
Alignment:
Q  344 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgta 421  Q
    ||||||||||||   ||| ||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||    
T  27474441 ataaaagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattcagtgtattgta 27474364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 346 - 442
Target Start/End: Complemental strand, 6925259 - 6925163
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||| ||||||  ||| ||||||||||||||||||||||||| ||||||||| |||||| ||||  |||||||||  ||| ||||||||||||||||    
T  6925259 aaaaaggcaactcggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattcggtgtattgtccgcagccttaccctatttttt 6925163  T

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Target: chr1; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 345 - 433
Target Start/End: Complemental strand, 14617198 - 14617110
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttacc 433  Q
    |||||||| |||  ||| |||||||||||||||||| ||||||||||||||||  ||||| ||||| |||||||||| |||||||||||    
T  14617198 taaaagggtaacccggtgcactaaagctcccgcatatgcagggtccgggaagggatcccaccatttggtgtattgtacgcaaccttacc 14617110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 345 - 442
Target Start/End: Complemental strand, 35005285 - 35005186
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||  ||| ||||||||| ||||||||||||||||||||||||| |||||| ||  ||| |||||||||| ||| ||||||||| ||||||    
T  35005285 taaaagggcaacccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtttttt 35005186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 342 - 442
Target Start/End: Original strand, 30395721 - 30395823
Alignment:
Q  342 aaataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctattt 439  Q
    |||||||||||||||  ||| |||||||||||||||||| || ||||||||||||| |||||| |||  || |||||||||| ||| ||||||||| |||    
T  30395721 aaataaaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttt 30395820  T
Q  440 ttt 442  Q
    |||    
T  30395821 ttt 30395823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 346 - 441
Target Start/End: Original strand, 31382213 - 31382308
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    |||||||||||  |||||| ||||||||||||||| ||||||||| |||||| |||||| ||||| |||||||||| ||| ||||| ||| |||||    
T  31382213 aaaagggcaacccggtacagtaaagctcccgcatatgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttatcctgttttt 31382308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 343 - 441
Target Start/End: Original strand, 32632553 - 32632651
Alignment:
Q  343 aataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    |||||||||| ||| |||| |||| ||||||||||||| |||||||  ||||||| |||||| ||||| |||||||||| ||| ||||||||| |||||    
T  32632553 aataaaagggaaacctggtgcactcaagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 32632651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 346 - 440
Target Start/End: Original strand, 35253186 - 35253280
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    ||||||||||   ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  35253186 aaaagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 35253280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 346 - 441
Target Start/End: Original strand, 42304206 - 42304303
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttaccctattttt 441  Q
    ||||||||||   ||| ||||||||||||| ||||||||||||||||||||| |||||| ||  ||| |||||||||| ||||||||||||| |||||    
T  42304206 aaaagggcaatccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattttttgtgtattgtacgcaaccttaccctgttttt 42304303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 358 - 440
Target Start/End: Complemental strand, 47214656 - 47214574
Alignment:
Q  358 tggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    |||| ||||| |||||||||||| |||||||| ||||||| |||||| ||||| |||||||||| ||||||||||||| ||||    
T  47214656 tggtgcactagagctcccgcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgtttt 47214574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 442
Target Start/End: Complemental strand, 18944805 - 18944706
Alignment:
Q  346 aaaagggcaacatggtacactaaa-gctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||| ||||||| |||||||||||||||||||||||||||| |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  18944805 aaaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtacgcagccttaccctgtttttt 18944706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 442
Target Start/End: Complemental strand, 46991959 - 46991867
Alignment:
Q  350 gggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||  ||| ||||||||||||| ||||||||||||||||||||| |||||| ||||  ||||||||||  || ||||||||| ||||||    
T  46991959 gggcaacccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagccttaccctgtttttt 46991867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 345 - 440
Target Start/End: Complemental strand, 19414597 - 19414502
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    ||||||||||||  ||| ||||| |||||||||||| ||||||| |||||||| |||||| ||||| |||||||||| ||| ||||| ||| ||||    
T  19414597 taaaagggcaacccggtgcactagagctcccgcatatgcagggtacgggaaggggtcccaccatttggtgtattgtacgcagccttaacctgtttt 19414502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 350 - 421
Target Start/End: Complemental strand, 45402251 - 45402180
Alignment:
Q  350 gggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgta 421  Q
    |||||||  ||| ||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||||    
T  45402251 gggcaacccggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttggtgtattgta 45402180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 367 - 441
Target Start/End: Complemental strand, 11596650 - 11596576
Alignment:
Q  367 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    |||||||||||||||||||||||| |||||| |||||| ||||| ||||||| || ||| ||||||||| |||||    
T  11596650 aaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattatacgcagccttaccctgttttt 11596576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 346 - 440
Target Start/End: Original strand, 12126836 - 12126930
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    |||||||||||   || ||||| |||||||||||| |||||||||||||||| ||||||  |||| |||||||||| ||| ||||||||| ||||    
T  12126836 aaaagggcaacgcagtgcactacagctcccgcatatgcagggtccgggaaggggtcccacaatttggtgtattgtacgcagccttaccctgtttt 12126930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 346 - 440
Target Start/End: Original strand, 38478281 - 38478375
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    |||||||||||  ||| ||||| |||||||||||| |||||||||| ||||| || ||| ||||| |||||||||| ||| ||||||||| ||||    
T  38478281 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgagaaggggttccaccatttggtgtattgtacgcagccttaccctgtttt 38478375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 440
Target Start/End: Original strand, 10378751 - 10378828
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    |||||||||||||||||| |||||||||  ||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  10378751 cactaaagctcccgcatatgcagggtccaagaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 10378828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 442
Target Start/End: Original strand, 41319804 - 41319901
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||   || |||| || |||||||||| | ||||| |||||||| |||||||||||| |||||||||| ||| ||||||||| ||||||    
T  41319804 taaaagggcaacccagtgcactgaaactcccgcatatgaagggttcgggaaggggtcccatcatttggtgtattgtacgcagccttaccctgtttttt 41319901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 435
Target Start/End: Complemental strand, 43768278 - 43768209
Alignment:
Q  366 taaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 435  Q
    ||||||||||| |||||||||||| ||||||| |||||| || || |||||||||||||| |||||||||    
T  43768278 taaagctcccgtatacgcagggtctgggaaggggtcccaccaattggtgtattgtaggcagccttaccct 43768209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 367 - 435
Target Start/End: Complemental strand, 15505702 - 15505634
Alignment:
Q  367 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 435  Q
    |||||||||||||||||||||| |||||||| |||||| ||||| |||||||||| |||  ||||||||    
T  15505702 aaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaccct 15505634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 26879753 - 26879693
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||| | |||||||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  26879753 aaattataccagaggtcctttaagtttgaggtttgtaacagattggtcatttaagttattt 26879693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 50606562 - 50606498
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 410  Q
    |||||||||||  ||| |||||||||||||||||| |||||||||||||||| |||||| |||||    
T  50606562 aaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattt 50606498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 442
Target Start/End: Original strand, 6983807 - 6983906
Alignment:
Q  343 aataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||| |  ||| ||| |||||||| || |||||||||||||| |||| |||||| ||||| |||||||||| |||  |||||||| ||||||    
T  6983807 aataaaagggcagcccggtgcaccaaagctcctgcctacgcagggtccggaaaggggtcccaccatttggtgtattgtacgcatacttaccctgtttttt 6983906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 18741956 - 18742054
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||| |||  ||| ||||||||||| ||||||||||||||| ||||||| |||||| ||  ||| |||||||||| ||| ||||||||| ||||||    
T  18741956 aaaagggaaacccggtgcactaaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttt 18742054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 363 - 441
Target Start/End: Original strand, 19974090 - 19974169
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccctattttt 441  Q
    |||||||||||||||||||  || ||||||||| | ||||||||| ||| |||||||||| |||||||| ||||||||||    
T  19974090 cactaaagctcccgcatacatagagtccgggaatgggtcccatcattttggtgtattgtacgcaaccttgccctattttt 19974169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 441
Target Start/End: Original strand, 21910673 - 21910743
Alignment:
Q  370 gctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    ||||||||| ||| ||||| |||||||| |||||| ||||| |||||||||| |||||||||||||||||||    
T  21910673 gctcccgca-acgtagggttcgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttt 21910743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 363 - 435
Target Start/End: Complemental strand, 27201791 - 27201717
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttaccct 435  Q
    |||||||||||||||||||||| |||||||||||| |||||| ||  ||| |||||||||| ||| |||||||||    
T  27201791 cactaaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccct 27201717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 343 - 442
Target Start/End: Original strand, 20004086 - 20004187
Alignment:
Q  343 aataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttt 440  Q
    ||||||||||||||  ||| |||||||||||||||||| || ||||| ||||||| |||||| |||  || |||||||||| ||| ||||||| | ||||    
T  20004086 aataaaagggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgtttt 20004185  T
Q  441 tt 442  Q
    ||    
T  20004186 tt 20004187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 432
Target Start/End: Complemental strand, 23796624 - 23796538
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttac 432  Q
    ||||||||| |  ||| |||||||||||| ||||| |||||||| ||||||| ||| || ||||| |||||||||| ||||||||||    
T  23796624 aaaagggcagcccggtgcactaaagctccagcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgcaaccttac 23796538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 369 - 435
Target Start/End: Original strand, 25468285 - 25468351
Alignment:
Q  369 agctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 435  Q
    ||||||||||||||||||||| ||||||  |||| | ||||| |||||||||| |||||||||||||    
T  25468285 agctcccgcatacgcagggtctgggaagaggtccaaccatttggtgtattgtacgcaaccttaccct 25468351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 34173317 - 34173363
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||    
T  34173317 gtcctttaagtttgatgtttgtaacagattggtcctttaagttattt 34173363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 440
Target Start/End: Original strand, 45812536 - 45812630
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    |||| ||||||  ||| ||||| |||||||||||| |||||||  ||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  45812536 aaaaaggcaacccggtgcactagagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtatgcagccttaccctctttt 45812630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 346 - 431
Target Start/End: Original strand, 1517310 - 1517395
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaacctta 431  Q
    |||||||||||  ||| |||||||||||| |||||||||||||| | ||||| |||||| || || |||||||||| ||| |||||    
T  1517310 aaaagggcaacccggtgcactaaagctcctgcatacgcagggtctgagaaggggtcccaccaattggtgtattgtacgcagcctta 1517395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 344 - 442
Target Start/End: Original strand, 19932750 - 19932850
Alignment:
Q  344 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttaccctattttt 441  Q
    |||| |||||||| |||| |||||| | ||  |||||||||||||||||||||| |||||| ||  ||| |||||||||| ||| ||||||||| |||||    
T  19932750 ataatagggcaacctggtgcactaatgatcttgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttt 19932849  T
Q  442 t 442  Q
    |    
T  19932850 t 19932850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 430
Target Start/End: Original strand, 20999848 - 20999933
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaacctt 430  Q
    |||||||||| |  ||| ||||||||||||||| |||||||||| | |||||| | |||||||||| |||||||||| ||| ||||    
T  20999848 taaaagggcagcccggtgcactaaagctcccgcgtacgcagggtgccggaaggggccccatcatttggtgtattgtacgcagcctt 20999933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 442
Target Start/End: Complemental strand, 8197202 - 8197106
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||| ||||| |||| | ||||| ||||| |||| | | ||||||| | ||||||    
T  8197202 aaaagggcaacccggtacactaaagctccaacatacgcagggtccgagaaggggtcctaccatttggtgtactgtacgtagccttaccatgtttttt 8197106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 410
Target Start/End: Complemental strand, 19701718 - 19701666
Alignment:
Q  358 tggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 410  Q
    |||| ||||||||||||||||||||||||||||||||||| | |||| |||||    
T  19701718 tggtgcactaaagctcccgcatacgcagggtccgggaaggggccccaccattt 19701666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 442
Target Start/End: Original strand, 20982773 - 20982845
Alignment:
Q  370 gctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||||||||||||| ||||   ||||| ||||  ||||||||| |||| ||||||||||||||||    
T  20982773 gctcccgcatacgcagggtccgagaagagatcccaccattaggtgtattgttggcagccttaccctatttttt 20982845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 33650383 - 33650443
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||| ||| |||||||||||||||| |||| ||||| ||||||| ||||||||||||    
T  33650383 aaattacaccaggggtcctttaagtttgaggtttataacagattggtcctttaagttattt 33650443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 367 - 442
Target Start/End: Original strand, 18724565 - 18724640
Alignment:
Q  367 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||||| | |||||||||||||| ||||||  |||| ||||||||||  || ||||||||| ||||||    
T  18724565 aaagctcccgcatatgtagggtccgggaaggggtcccaagatttggtgtattgtacacagccttaccctgtttttt 18724640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 344 - 399
Target Start/End: Original strand, 19386573 - 19386628
Alignment:
Q  344 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggag 399  Q
    ||||||| ||||| |||| ||||| |||||||||||| ||||||||||||||||||    
T  19386573 ataaaagagcaacctggttcactagagctcccgcatatgcagggtccgggaaggag 19386628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 404
Target Start/End: Original strand, 20169104 - 20169146
Alignment:
Q  362 acactaaagctcccgcatacgcagggtccgggaaggagtccca 404  Q
    |||| |||||||||||||| |||||||||||||||||||||||    
T  20169104 acacaaaagctcccgcatatgcagggtccgggaaggagtccca 20169146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 44485129 - 44485195
Alignment:
Q  367 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttacc 433  Q
    |||||||||||||||| ||| |||||||||| |||| | ||||| |||||||||| ||| |||||||    
T  44485129 aaagctcccgcatacgtaggatccgggaaggggtccaaccatttggtgtattgtacgcagccttacc 44485195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 404
Target Start/End: Original strand, 33594147 - 33594188
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtccca 404  Q
    ||||||||||||||||||||||||||| ||||||| ||||||    
T  33594147 cactaaagctcccgcatacgcagggtctgggaaggggtccca 33594188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 193 - 250
Target Start/End: Complemental strand, 33650753 - 33650696
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagtta 250  Q
    |||||||||| |||||||||||||||||| ||| |||||| |||| || |||||||||    
T  33650753 aaattacatccgaggtcctttaagtttgaggttcgtaacagattgatcctttaagtta 33650696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 366 - 442
Target Start/End: Complemental strand, 50812079 - 50812003
Alignment:
Q  366 taaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||||||||||||  |||||||| || ||| || ||| |||||||||| ||||||||||||| ||||||    
T  50812079 taaagctcccgcatacgcagggcgcgggaaggggt-ccaccattttggtgtattgtacgcaaccttaccctgtttttt 50812003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 397
Target Start/End: Complemental strand, 9939624 - 9939572
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaagg 397  Q
    |||||||| |||  ||| ||||||||||||||||||||||||||||| |||||    
T  9939624 taaaagggtaacccggtgcactaaagctcccgcatacgcagggtccgagaagg 9939572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 435
Target Start/End: Complemental strand, 20036355 - 20036291
Alignment:
Q  371 ctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 435  Q
    |||| |||||||||||||||||||||| || ||| ||||| |||||||| | |||| ||||||||    
T  20036355 ctcctgcatacgcagggtccgggaaggggttccaccatttggtgtattgaacgcaatcttaccct 20036291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 411
Target Start/End: Complemental strand, 30555257 - 30555209
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcattta 411  Q
    ||||||||||| ||||||||||||||||| ||||| |||||| ||||||    
T  30555257 cactaaagctctcgcatacgcagggtccgtgaaggggtcccaccattta 30555209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 442
Target Start/End: Original strand, 31442409 - 31442485
Alignment:
Q  367 aaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||| ||||| ||| ||||||||||| |||||| || ||| |||||||||| ||| ||||||||| ||||||    
T  31442409 aaagctcccacatacacagtgtccgggaaggggtcccaccattttggtgtattgtacgcatccttaccctgtttttt 31442485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 410
Target Start/End: Original strand, 35117781 - 35117829
Alignment:
Q  363 cactaaagctcccgcat-acgcagggtccgggaaggagtcccatcattt 410  Q
    |||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  35117781 cactaaagctcctgcattacgcagggtccgggaaggggtcccatcattt 35117829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 40892651 - 40892591
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||  | |||||||| ||||||| ||||||||||||||| || ||||||||||||    
T  40892651 aaattacatttgtggtcctttgagtttgaggtttgtaacatattgatcatttaagttattt 40892591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 441
Target Start/End: Original strand, 2435802 - 2435881
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccctattttt 441  Q
    ||||||||||||||||| || ||||| ||| |||| |||||| || ||| |||||||||| |||  ||||||||||||||    
T  2435802 cactaaagctcccgcatgcggagggtacggaaaggggtcccaccattttggtgtattgtacgcaggcttaccctattttt 2435881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 410
Target Start/End: Original strand, 4587579 - 4587626
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 410  Q
    |||| ||||||||||||| |||||||||||||||| |||||| |||||    
T  4587579 cactgaagctcccgcataggcagggtccgggaaggggtcccaccattt 4587626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 410
Target Start/End: Complemental strand, 30682950 - 30682907
Alignment:
Q  367 aaagctcccgcatacgcagggtccgggaaggagtcccatcattt 410  Q
    |||||||||||||||||| |||||||||||| |||||| |||||    
T  30682950 aaagctcccgcatacgcacggtccgggaaggggtcccaccattt 30682907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 52913017 - 52913076
Alignment:
Q  194 aattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||| ||| |||| ||||||||||| |||||||||| ||| ||| ||||||||||||    
T  52913017 aattacaccaggggtcttttaagtttgaagtttgtaacagattagtcctttaagttattt 52913076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 2633601 - 2633555
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||||| |||||| ||| ||||||| ||||||||||||    
T  2633601 gtcctttaagtttgaggtttgtgacagattggtcatttaagttattt 2633555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 442
Target Start/End: Original strand, 18335305 - 18335383
Alignment:
Q  364 actaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||| |||| || ||||  |||| | ||||||||||||  ||||||||| ||||| |||||||| |||||    
T  18335305 actaaagctcccgtatacacatggtctaggaaagggtcccatcatttgatgtattgtacgcaactttaccctaattttt 18335383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 440
Target Start/End: Original strand, 34148983 - 34149053
Alignment:
Q  370 gctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    ||||| ||||| ||||||||| |||||| ||| || ||||| || | ||||| ||||||||||||||||||    
T  34148983 gctcctgcatatgcagggtccaggaaggggtctcaccatttggtcttttgtacgcaaccttaccctatttt 34149053  T

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Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 392
Target Start/End: Original strand, 31272397 - 31272426
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgg 392  Q
    ||||||||||||||||||||||||||||||    
T  31272397 cactaaagctcccgcatacgcagggtccgg 31272426  T

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Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 402
Target Start/End: Complemental strand, 16120875 - 16120819
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcc 402  Q
    ||||||||| | |||| || ||||||||||||||| |||||| ||||||||| ||||    
T  16120875 aaaagggcagcctggtgcattaaagctcccgcatatgcaggggccgggaaggggtcc 16120819  T

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Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 22325049 - 22325009
Alignment:
Q  349 agggcaacatggtacactaaagctcccgcatacgcagggtc 389  Q
    |||||| | |||| |||||||||||||||||||||||||||    
T  22325049 agggcagcctggtgcactaaagctcccgcatacgcagggtc 22325009  T

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Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 431
Target Start/End: Complemental strand, 35019371 - 35019304
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaacctta 431  Q
    ||||||||||| ||||||||||||||| ||| ||| |||||| || || |||||||||| ||| |||||    
T  35019371 cactaaagctctcgcatacgcagggtctggg-aggggtcccaccaattggtgtattgtatgcagcctta 35019304  T

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Target: scaffold1176 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 342 - 440
Target Start/End: Original strand, 1583 - 1680
Alignment:
Q  342 aaataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    |||||||||| |||| |||| ||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||| ||| ||||| ||| ||||    
T  1583 aaataaaagg-caacctggtgcactaaagctcccgcatacgccgggtccgggaaggggtcccatcatttggtgtattgtatgcagccttatcctgtttt 1680  T

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Target: chr7 (Bit Score: 53; Significance: 3e-21; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 346 - 442
Target Start/End: Complemental strand, 7879774 - 7879678
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||| |||| |||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||| ||||||| | ||||||    
T  7879774 aaaagggcaacccggtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtttttt 7879678  T

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Target: chr7; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 38262195 - 38262291
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||   ||| ||||||||||||||||||||||| || |||||||| |||||||||||| |||||||||| ||||| ||||| ||||||||    
T  38262195 aaaagggcaatccggtgcactaaagctcccgcatacgcagtgttcgggaaggggtcccatcatttggtgtattgtatgcaacattaccatatttttt 38262291  T

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Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 342 - 441
Target Start/End: Original strand, 18512448 - 18512547
Alignment:
Q  342 aaataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    |||||| ||||||||   || ||| ||||||||||||||||||||||||||||||| |||||| ||||  |||||||||| ||| |||||||||||||||    
T  18512448 aaataacagggcaacccagtgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcagccttaccctattttt 18512547  T

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Target: chr7; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 345 - 440
Target Start/End: Original strand, 21172007 - 21172102
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    ||||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  21172007 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 21172102  T

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Target: chr7; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 346 - 440
Target Start/End: Original strand, 42391099 - 42391193
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    |||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  42391099 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 42391193  T

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Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 2541035 - 2541114
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||||||||||||||| ||||||||| |||||| ||||| |||||| ||| ||| ||||||||| ||||||    
T  2541035 cactaaagctcccgcatacgcagggaccgggaaggggtcccaccatttggtgtatagtacgcagccttaccctgtttttt 2541114  T

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Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 342 - 432
Target Start/End: Original strand, 31591104 - 31591194
Alignment:
Q  342 aaataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttac 432  Q
    |||||||||||||||  ||| ||||| |||||||||||| ||| |||||||||||| |||||| |||||| ||||||||| ||| ||||||    
T  31591104 aaataaaagggcaacccggtgcactagagctcccgcatatgcaaggtccgggaaggggtcccaccatttattgtattgtacgcagccttac 31591194  T

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Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 346 - 440
Target Start/End: Complemental strand, 32758395 - 32758301
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    |||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| ||||||||||  || ||||||||| ||||    
T  32758395 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctgtttt 32758301  T

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Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 347 - 433
Target Start/End: Original strand, 48735122 - 48735208
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttacc 433  Q
    ||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| |||||||    
T  48735122 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttacc 48735208  T

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Target: chr7; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 363 - 440
Target Start/End: Original strand, 10693089 - 10693166
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  10693089 cactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctctttt 10693166  T

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Target: chr7; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 364 - 441
Target Start/End: Original strand, 34626225 - 34626302
Alignment:
Q  364 actaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||||| |||||||| | ||| ||||||||| |||||    
T  34626225 actaaagctcccgcatacgcagggtccgggaagggatcccaccatttggtgtattgaacgcagccttaccctgttttt 34626302  T

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Target: chr7; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 345 - 434
Target Start/End: Complemental strand, 40464013 - 40463924
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccc 434  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||| ||||| |||||| ||||| ||||||| || ||| ||||||||    
T  40464013 taaaagggcaactcggtgcactgaagctcccgcatacgcagggtccgagaaggggtcccaccatttggtgtattatacgcagccttaccc 40463924  T

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Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 442
Target Start/End: Complemental strand, 27629770 - 27629674
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||| |||| ||||| ||||||| |||||| ||||||||| |||||| ||||| ||||||| || ||||||||||||| ||||||    
T  27629770 aaaagggcaacccggtgcactgaagctaccgcatatgcagggcccgggaaggggtcccaccatttggtgtattttacgcaaccttaccctgtttttt 27629674  T

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Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 430
Target Start/End: Original strand, 27889315 - 27889399
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaacctt 430  Q
    |||||||||||  |||  || ||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| ||| ||||    
T  27889315 aaaagggcaacccggtgtaccaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagcctt 27889399  T

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Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 345 - 433
Target Start/End: Original strand, 35787267 - 35787355
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttacc 433  Q
    ||||||||||||  ||| || | ||||||||||||||||| |||||||||||| |||||  ||||| |||||||||| |||||||||||    
T  35787267 taaaagggcaacccggtgcattgaagctcccgcatacgcaaggtccgggaaggggtcccgccatttggtgtattgtacgcaaccttacc 35787355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 366 - 441
Target Start/End: Complemental strand, 38604642 - 38604567
Alignment:
Q  366 taaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    ||||||||||||||||||||||||||| |||| ||| || ||||| |||||||||| ||| ||||||||| |||||    
T  38604642 taaagctcccgcatacgcagggtccggaaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttt 38604567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 442
Target Start/End: Original strand, 11617589 - 11617683
Alignment:
Q  348 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||  ||| |||||||| ||| ||||||||||||||| |||||| |||||| ||||| |||||||||| |||  |||||||| ||||||    
T  11617589 aagggcaacccggtgcactaaaggtcctgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgtttttt 11617683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 368 - 442
Target Start/End: Complemental strand, 19266564 - 19266490
Alignment:
Q  368 aagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||||||||||||||||||||  |||||  |||| |||||||||| ||| ||||||||| ||||||    
T  19266564 aagctcccgcatacgcagggtccgggaagggatcccacaatttggtgtattgtacgcagccttaccctgtttttt 19266490  T

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Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 351 - 441
Target Start/End: Original strand, 33871914 - 33872004
Alignment:
Q  351 ggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    |||||| |||| ||||||||||| ||||||| ||||||| ||||||| |||||| ||||| |||||||||| ||| ||||| ||| |||||    
T  33871914 ggcaacctggtgcactaaagctctcgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttatcctgttttt 33872004  T

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Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 347 - 397
Target Start/End: Original strand, 45018923 - 45018973
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaagg 397  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  45018923 aaagggcaacctggtgcactaaagctcccgcatacgcagggtccgggaagg 45018973  T

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Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 19426889 - 19426984
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||| |||| |||||| |||||| |||||||||| ||||| |||||| ||||| |||||||||| |||  |||||||||||||||    
T  19426889 aaaagggcaacccggtgcactgaagctctcgcatatgcagggtccgagaagg-gtcccaccatttggtgtattgtacgcagtcttaccctatttttt 19426984  T

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Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 42312744 - 42312804
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||| | |||||||||||||||||| |||||||| ||||||||| ||||||||||||    
T  42312744 aaattacacctgaggtcctttaagtttgaggtttgtaatatattggtcatttaagttattt 42312804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 346 - 442
Target Start/End: Complemental strand, 42798805 - 42798709
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  | | ||||| |||||||||||| |||||||||||||| | |||||| ||||| |||||||||| ||| ||||||| | ||||||    
T  42798805 aaaagggcaacccgatgcactatagctcccgcatatgcagggtccgggaaagggtcccaccatttggtgtattgtacgcagccttaccttgtttttt 42798709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 6694809 - 6694762
Alignment:
Q  206 ggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||    
T  6694809 ggtcctttaagtttgaggtttgtaacatattggtcctttaagttattt 6694762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 8148962 - 8149040
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||| ||| |||||||||| | || ||||||| |||||| ||||| |||||||||| ||||||||||||||||||||    
T  8148962 cactaaaactctcgcatacgcaag-tctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctatttttt 8149040  T

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Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 23231676 - 23231597
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||| ||||||||||||||| |||||||| |||||||||||  ||||||| || ||| ||||||| ||| ||||    
T  23231676 cactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagccttaccttatatttt 23231597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 35334832 - 35334911
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||||  ||||||||||  ||  |||||||| ||||||    
T  35334832 cactaaagctcctgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagtcttaccctgtttttt 35334911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 442
Target Start/End: Complemental strand, 42805662 - 42805564
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||| |||||||||||||||||| || ||||||||||||| |||||| |||  || ||||||||||  || ||||||||| ||||||    
T  42805662 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgtttttt 42805564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 29710379 - 29710425
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  29710379 gtcctttaagtttgatatttgtaacatattggtcctttaagttattt 29710425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 347 - 442
Target Start/End: Complemental strand, 47716596 - 47716499
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||  ||| ||| |||||||||||||| || ||||||||||||| |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  47716596 aaagggcaacccggtgcaccaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 47716499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 39124032 - 39123967
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 410  Q
    |||||||||| | |||| ||| ||||||||| ||||||||||||||||||||| |||||| |||||    
T  39124032 taaaagggcagcttggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 39123967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 6694516 - 6694576
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||  || |||||||||||| |||||||| | ||||||||||||||||||||    
T  6694516 aaattacatcaggcgttctttaagtttgaggtttgtaataaattggtcttttaagttattt 6694576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 440
Target Start/End: Complemental strand, 11741927 - 11741835
Alignment:
Q  348 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    |||||||||  ||| ||||| |||||||||||  ||||  ||||||||||  ||||| ||||| |||||||||| ||| ||||||||||||||    
T  11741927 aagggcaacccggtgcactagagctcccgcatgtgcagaatccgggaagggatcccaccatttggtgtattgtacgcagccttaccctatttt 11741835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 435
Target Start/End: Complemental strand, 18747606 - 18747534
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccct 435  Q
    |||||||||||||||||||||||||| | |||||| |||||| || || ||||||| || ||| |||||||||    
T  18747606 cactaaagctcccgcatacgcagggttcaggaaggggtcccaccaattggtgtattatacgcagccttaccct 18747534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 27280599 - 27280659
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||| ||| |||||||||||||||| |||||| ||| ||||||| ||||||||||||    
T  27280599 aaattacaccaggggtcctttaagtttgaagtttgttacaaattggtcctttaagttattt 27280659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 442
Target Start/End: Original strand, 28078151 - 28078227
Alignment:
Q  366 taaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||| |||||| ||||| | |||||||| |||||| ||||| |||||||| | ||||||||||||| ||||||    
T  28078151 taaagctctcgcatatgcaggattcgggaaggggtcccaccatttggtgtattgcatgcaaccttaccctgtttttt 28078227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 3198273 - 3198316
Alignment:
Q  210 ctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||| |||||||||| ||||||||||||||||||||    
T  3198273 ctttaagtttgaggtttgtaacaaattggtcttttaagttattt 3198316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 367 - 434
Target Start/End: Complemental strand, 13805216 - 13805149
Alignment:
Q  367 aaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccc 434  Q
    |||||||||||||||||||||||| |||||  |||||| ||||| ||||||||||  || ||||||||    
T  13805216 aaagctcccgcatacgcagggtccaggaagtggtcccaccatttggtgtattgtacacagccttaccc 13805149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 441
Target Start/End: Complemental strand, 19265949 - 19265855
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    ||||||||| |  ||| ||||||||||||| |||| | ||| |||||||||| |||||| ||||| |||||||||| ||| ||||||||| |||||    
T  19265949 aaaagggcagcccggtgcactaaagctcccacatatgtagg-tccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctcttttt 19265855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 397
Target Start/End: Original strand, 42495865 - 42495912
Alignment:
Q  350 gggcaacatggtacactaaagctcccgcatacgcagggtccgggaagg 397  Q
    |||||||  ||| |||||||||||||||||||||||||||||||||||    
T  42495865 gggcaacggggtgcactaaagctcccgcatacgcagggtccgggaagg 42495912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 6222079 - 6222125
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||||    
T  6222079 gtcctttaagtttaaggtttgtaatatattggtcttttaagttattt 6222125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 27576669 - 27576623
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  27576669 gtcctttaagtttgacgtttgtaacagattggtcctttaagttattt 27576623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 29710658 - 29710612
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||||| |||||||||| |||||||||||| |||||||    
T  29710658 gtcctttaagtttgacgtttgtaacagattggtcttttaggttattt 29710612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 11975506 - 11975551
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttatt 252  Q
    ||||||||||||||| ||||||||||||||| || |||||||||||    
T  11975506 gtcctttaagtttgaggtttgtaacatattgatcctttaagttatt 11975551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 348 - 433
Target Start/End: Complemental strand, 42477005 - 42476920
Alignment:
Q  348 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttacc 433  Q
    ||||||||| |||| ||||| |||||||||||| |||| | |  |||||| |||||| ||||| |||||||||| ||| |||||||    
T  42477005 aagggcaacctggtgcactagagctcccgcatatgcagagcctaggaaggggtcccaccatttggtgtattgtacgcagccttacc 42476920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 440
Target Start/End: Original strand, 47077871 - 47077948
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    ||||| |||||||||||| | |||||  ||||||| |||||| ||||| |||||||||| ||||| |||| |||||||    
T  47077871 cactagagctcccgcatatgtagggtttgggaaggggtcccaccattttgtgtattgtacgcaactttactctatttt 47077948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 29710305 - 29710365
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||| | |||||||||||||||| |||||||||| |||  || ||||||||||||    
T  29710305 aaattacatctggggtcctttaagtttgacgtttgtaacagattaatcctttaagttattt 29710365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 442
Target Start/End: Complemental strand, 29907552 - 29907459
Alignment:
Q  348 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||  ||| ||||||||||||||||||  |||||||||||| || |||||| || ||| |||||||| | ||| |||||| |||||||||    
T  29907552 aagggcaacccggtgcactaaagctcccgcata--cagggtccgggatggggtcccaccattttggtgtattgaacgcagccttacactatttttt 29907459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 31453134 - 31453074
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||| ||| |||||||||||||||||| |||||||||| ||| ||  ||||||||||||    
T  31453134 aaattatatcggaggtcctttaagtttgaggtttgtaacagattagttatttaagttattt 31453074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 394
Target Start/End: Complemental strand, 36602583 - 36602535
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccggga 394  Q
    |||||||||||  ||| ||||||||||||||||||||||||||| ||||    
T  36602583 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtctggga 36602535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 442
Target Start/End: Complemental strand, 43557611 - 43557512
Alignment:
Q  346 aaaagggcaacatggtacactaaa-gctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||| ||||||| |||||||||||||||| |||||||| || |||||| |||  || |||||||||| ||| |||||| || ||||||    
T  43557611 aaaagggcaacccggtgcactaaaagctcccgcatacgcagagtccgggagggggtcccaccattattggtgtattgtacgcagccttactctgtttttt 43557512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 440
Target Start/End: Original strand, 2662958 - 2663028
Alignment:
Q  369 agctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    |||||||||||| |||||||| |  |||| |||||| ||||| |||||||||| ||| ||||||||||||||    
T  2662958 agctcccgcatatgcagggtctgaaaagg-gtcccaccatttggtgtattgtacgcagccttaccctatttt 2663028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 30869675 - 30869632
Alignment:
Q  210 ctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||| |||||||||| ||||||| ||||||||||||    
T  30869675 ctttaagtttgaggtttgtaacagattggtcctttaagttattt 30869632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 410
Target Start/End: Complemental strand, 33500634 - 33500587
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 410  Q
    |||| ||| |||||||||||||||||||||||||| |||||| |||||    
T  33500634 cactgaagatcccgcatacgcagggtccgggaaggggtcccaccattt 33500587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 376 - 442
Target Start/End: Complemental strand, 1408563 - 1408497
Alignment:
Q  376 gcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||||||||||||| |||||| |||||  |||||||||  || ||||||| | ||||||    
T  1408563 gcatacgcagggtccgggaaggggtcccaccatttgctgtattgtacacagccttaccttgtttttt 1408497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 3469191 - 3469272
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||||||||| |||||||  |||||| |||||  ||  ||| |||||||||| |||||| |||||| ||||||    
T  3469191 cactaaagctcccgcatacacagggtctaggaaggggtcccgccatttttggtgtattgtacgcaaccgtaccctgtttttt 3469272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 11975719 - 11975673
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||||| |||||||||  ||||||| ||||||||||||    
T  11975719 gtcctttaagtttgaggtttgtaactgattggtcctttaagttattt 11975673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 41666425 - 41666375
Alignment:
Q  204 gaggtcctttaagtttgatgtttgtaacatattggtcttttaagttatttc 254  Q
    |||||||||||||||||| |||||||||| ||| |||  ||||||||||||    
T  41666425 gaggtcctttaagtttgaggtttgtaacagatttgtcccttaagttatttc 41666375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 4048264 - 4048305
Alignment:
Q  210 ctttaagtttgatgtttgtaacatattggtcttttaagttat 251  Q
    |||||||| ||| |||||||||||||||||| ||||||||||    
T  4048264 ctttaagtctgaggtttgtaacatattggtcctttaagttat 4048305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 6069338 - 6069293
Alignment:
Q  208 tcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||||| |||||||||||||  ||| ||||||||||||    
T  6069338 tcctttaagtttgaggtttgtaacatatatgtcatttaagttattt 6069293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 27280961 - 27280901
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||  ||||||||||||||||||| ||||||||||  |||  | ||||||||||||    
T  27280961 aaattacactagaggtcctttaagtttgaggtttgtaacagcttgaccctttaagttattt 27280901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 30869752 - 30869692
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||| ||| ||| |||||||||||||| ||||||||   ||||||| ||||||||||||    
T  30869752 aaattatatctgagttcctttaagtttgaggtttgtaattgattggtcctttaagttattt 30869692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 47514848 - 47514793
Alignment:
Q  354 aacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 410  Q
    |||||||| |||||||||| ||| ||||||||||| |||||| |||||||| |||||    
T  47514848 aacatggtgcactaaagcttccg-atacgcagggttcgggaatgagtcccaccattt 47514793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 52; Significance: 1e-20; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 347 - 442
Target Start/End: Original strand, 72867 - 72962
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||| |||| |||||||||||||||||||||||| |||||||||| || | | ||||| |||||||||||||| ||||||| | ||||||    
T  72867 aaagggcaacctggtgcactaaagctcccgcatacgcaggttccgggaaggggtactaccatttggtgtattgtaggcagccttaccgtgtttttt 72962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 253
Target Start/End: Original strand, 161402 - 161449
Alignment:
Q  206 ggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||||||| |||||||||| ||||||| ||||| ||||||    
T  161402 ggtcctttaagtttgaggtttgtaacagattggtcctttaacttattt 161449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 161743 - 161697
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||||||||||||||| | |||| || ||||||||||||    
T  161743 gtcctttaagtttgatgtttgtaatagattgatcctttaagttattt 161697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 345 - 440
Target Start/End: Original strand, 48632 - 48727
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    ||||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  48632 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 48727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 345 - 440
Target Start/End: Original strand, 1354755 - 1354850
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    ||||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  1354755 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 1354850  T

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Target: chr6; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 346 - 440
Target Start/End: Complemental strand, 1347098 - 1347004
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    |||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||| ||||    
T  1347098 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 1347004  T

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Target: chr6; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 346 - 440
Target Start/End: Complemental strand, 26097294 - 26097200
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    |||||||||||  ||| ||||| |||||||||||| |||||||||||||||| ||||| |||||| |||||||||| ||| ||||||||| ||||    
T  26097294 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccttcatttggtgtattgtacgcagccttaccctgtttt 26097200  T

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Target: chr6; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 346 - 435
Target Start/End: Original strand, 29355854 - 29355945
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccct 435  Q
    |||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||| |||  || |||||||||| ||| |||||||||    
T  29355854 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct 29355945  T

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Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 346 - 440
Target Start/End: Complemental strand, 25557859 - 25557765
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    |||||||||||  ||| ||||| |||||||||||| |||||||||||||||| || || |||||| |||||||||| ||| ||||||||| ||||    
T  25557859 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccttcatttggtgtattgtacgcagccttaccctgtttt 25557765  T

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Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 12221913 - 12222012
Alignment:
Q  346 aaaagggcaacatggtacactaaa-gctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||  ||| ||||||| |||||||||||||||||||||||||||| |||||| |||  || |||||||||| ||| ||||||||| ||||||    
T  12221913 aaaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 12222012  T

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Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 21598798 - 21598738
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||| |||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  21598798 aaattacatcaggggtcctttaagtttgaggtttgtaacagattggtcctttaagttattt 21598738  T

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Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 24097713 - 24097649
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 410  Q
    ||||||||||| ||| ||||||||||| |||||||||||||||||||||||| |||||| |||||    
T  24097713 aaaagggcaacctgggacactaaagcttccgcatacgcagggtccgggaaggggtcccaccattt 24097649  T

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Target: chr6; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 344 - 427
Target Start/End: Original strand, 23930124 - 23930207
Alignment:
Q  344 ataaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaac 427  Q
    |||||||||||||  ||| |||||||||||||||||| |||||||||| ||||| |||||| ||| | |||||||||| |||||    
T  23930124 ataaaagggcaactcggtgcactaaagctcccgcataagcagggtccgtgaaggggtcccaccatctggtgtattgtacgcaac 23930207  T

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Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 346 - 419
Target Start/End: Complemental strand, 13267861 - 13267788
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattg 419  Q
    |||||||||||  ||| |||| ||||||||||||||||||||||| |||||| |||||| ||||| ||||||||    
T  13267861 aaaagggcaacccggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattg 13267788  T

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Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 10356614 - 10356554
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||| |||||||||||||||||| |||||||||| ||||||| |||| |||||||    
T  10356614 aaattacatctgaggtcctttaagtttgacgtttgtaacagattggtcctttaggttattt 10356554  T

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Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 13273053 - 13273113
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||| | ||||||    
T  13273053 aaattacaccagaggtcctttaagtttgatgtttgtaatagattggtcttttgaattattt 13273113  T

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Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 409
Target Start/End: Complemental strand, 6808531 - 6808468
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatt 409  Q
    |||||||||||  ||| ||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  6808531 aaaagggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggggtcccaccatt 6808468  T

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Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 409
Target Start/End: Complemental strand, 9161260 - 9161197
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatt 409  Q
    ||||||||||| |||| |||||||||| |||||||||||||||||| ||||| |||||| ||||    
T  9161260 aaaagggcaacctggtgcactaaagcttccgcatacgcagggtccgagaaggggtcccaccatt 9161197  T

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Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 12886050 - 12885985
Alignment:
Q  345 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 410  Q
    ||||||||||||  ||| ||||||||||||| ||||||||||||| ||||||| |||||| |||||    
T  12886050 taaaagggcaacccggtgcactaaagctcccacatacgcagggtctgggaaggggtcccaccattt 12885985  T

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Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 364 - 441
Target Start/End: Complemental strand, 32579543 - 32579466
Alignment:
Q  364 actaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctattttt 441  Q
    ||||||||||||||||| |||||||| ||||||| |||||| ||||| | |||||||| |||  |||||| |||||||    
T  32579543 actaaagctcccgcatatgcagggtctgggaaggggtcccaccatttggggtattgtacgcaggcttaccgtattttt 32579466  T

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Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 19340947 - 19340868
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||| |||||||||| |||||| |||||| ||||||||| ||| |||||||||  ||||||||||||| ||||||    
T  19340947 cactaaagcttccgcatacgccgggtccaggaaggggtcccatcattttggtgtattgt-tgcaaccttaccctgtttttt 19340868  T

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Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 409
Target Start/End: Complemental strand, 12892145 - 12892082
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatt 409  Q
    |||||||||||  ||| |||||||||||||||||| || ||||||||||||| |||||| ||||    
T  12892145 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 12892082  T

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Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 253
Target Start/End: Original strand, 35225396 - 35225443
Alignment:
Q  206 ggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  35225396 ggtcctttaagtttgaggtttgtaacaaattggtcctttaagttattt 35225443  T

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Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 10356540 - 10356494
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||||||  ||||||||| ||||||||||||||||||||    
T  10356540 gtcctttaagtttgagatttgtaacagattggtcttttaagttattt 10356494  T

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Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 21598504 - 21598550
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  21598504 gtcctttaagtttgaggtttgtaacagattggtcctttaagttattt 21598550  T

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Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 21598724 - 21598678
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||||  |||||||||||||||||| ||||||||||||    
T  21598724 gtcctttaagtttgtggtttgtaacatattggtcctttaagttattt 21598678  T

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Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 435
Target Start/End: Original strand, 7947387 - 7947460
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatca-tttagtgtattgtaggcaaccttaccct 435  Q
    ||||||||||||| |||||||| |||||||||||| | |||| || ||| |||||||||| ||| |||||||||    
T  7947387 cactaaagctcccacatacgcaaggtccgggaagggggcccaccattttggtgtattgtacgcagccttaccct 7947460  T

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Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 364 - 397
Target Start/End: Original strand, 10734922 - 10734955
Alignment:
Q  364 actaaagctcccgcatacgcagggtccgggaagg 397  Q
    ||||||||||||||||||||||||||||||||||    
T  10734922 actaaagctcccgcatacgcagggtccgggaagg 10734955  T

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Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 395
Target Start/End: Original strand, 32728156 - 32728205
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaa 395  Q
    |||||||||||||||| |||||||| ||||||||||| |||||| |||||    
T  32728156 aaaagggcaacatggtgcactaaagttcccgcatacgtagggtctgggaa 32728205  T

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Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 442
Target Start/End: Complemental strand, 1941991 - 1941895
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||||| ||| ||| ||| ||||||||||| || | ||| ||| || |||||| ||||  |||||||||| ||| ||||||||| ||||||    
T  1941991 aaaagggcaacacggtgcacaaaaactcccgcatacacaagatccaggatggggtcccaccattcggtgtattgtacgcagccttaccctgtttttt 1941895  T

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Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 431
Target Start/End: Original strand, 2166409 - 2166496
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaacctta 431  Q
    |||||||||||  ||| |||||||||||||| |||   |||||||||||||| |||||| |||  || |||||||||| |||||||||    
T  2166409 aaaagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaacctta 2166496  T

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Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 431
Target Start/End: Original strand, 2178042 - 2178129
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcat--ttagtgtattgtaggcaacctta 431  Q
    |||||||||||  ||| |||||||||||||| |||   |||||||||||||| |||||| |||  || |||||||||| |||||||||    
T  2178042 aaaagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaacctta 2178129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 9982655 - 9982715
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||||  || ||||| ||||||    
T  9982655 aaattacatcataggtcttttaagtttgaggtttgtaacatattcatcctttaaattattt 9982715  T

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Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 11395879 - 11395839
Alignment:
Q  364 actaaagctcccgcatacgcagggtccgggaaggagtccca 404  Q
    ||||||||||||||||||||||| |||||||||| ||||||    
T  11395879 actaaagctcccgcatacgcaggatccgggaaggggtccca 11395839  T

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Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 17136829 - 17136889
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||| |||||||||||||| ||||| |||||||| | ||| ||| ||||||||||||    
T  17136829 aaattacaccagaggtcctttaaatttgaggtttgtaatagattagtcctttaagttattt 17136889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 418
Target Start/End: Original strand, 15866055 - 15866110
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtatt 418  Q
    ||||| || ||||||| |||||||||||||||||| |||||| ||||| |||||||    
T  15866055 cactatagatcccgcaaacgcagggtccgggaaggggtcccaccatttggtgtatt 15866110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 254
Target Start/End: Complemental strand, 17342715 - 17342672
Alignment:
Q  211 tttaagtttgatgtttgtaacatattggtcttttaagttatttc 254  Q
    ||||||||||| ||||||||||| |||||| |||||||||||||    
T  17342715 tttaagtttgaggtttgtaacatgttggtcctttaagttatttc 17342672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 17342776 - 17342733
Alignment:
Q  210 ctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||| ||||||||||| |||||| ||||||||||||    
T  17342776 ctttaagtttgaggtttgtaacatgttggtcctttaagttattt 17342733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 253
Target Start/End: Original strand, 21598443 - 21598490
Alignment:
Q  206 ggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||||||| |||| ||||| ||||||| ||||||||||||    
T  21598443 ggtcctttaagtttgaggtttataacagattggtcctttaagttattt 21598490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 421
Target Start/End: Original strand, 383760 - 383834
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgta 421  Q
    ||||||||||  |||  ||| |||||||||||||||||||||| | ||||| ||||||  |||| ||||||||||    
T  383760 aaagggcaacccggtggactgaagctcccgcatacgcagggtctgagaaggggtcccacaatttggtgtattgta 383834  T

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Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 410
Target Start/End: Original strand, 3116146 - 3116192
Alignment:
Q  364 actaaagctcccgcatacgcagggtccgggaaggagtcccatcattt 410  Q
    ||||||||||||||||||||| |||||| ||||| |||||| |||||    
T  3116146 actaaagctcccgcatacgcaaggtccgagaaggggtcccaccattt 3116192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 10356320 - 10356366
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    |||||||||||||||| ||||||||| ||||||  ||||||||||||    
T  10356320 gtcctttaagtttgatatttgtaacagattggttctttaagttattt 10356366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 35050859 - 35050813
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||| | |||||||||| ||||||| ||||||||||||    
T  35050859 gtcctttaagtttaaagtttgtaacagattggtcctttaagttattt 35050813  T

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Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 250
Target Start/End: Original strand, 3848533 - 3848590
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagtta 250  Q
    |||||||||||  |||||||||||||||| |||||||| | || |||| |||||||||    
T  3848533 aaattacatcattggtcctttaagtttgaggtttgtaaaaaataggtcatttaagtta 3848590  T

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Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 440
Target Start/End: Original strand, 23240840 - 23240917
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    ||||||||||||||||||||||  ||||  ||||| |||||| || || || ||||||| |||| |||||||| ||||    
T  23240840 cactaaagctcccgcatacgcattgtcctagaaggggtcccaccaattggtatattgtacgcaaacttaccctgtttt 23240917  T

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Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 35050802 - 35050757
Alignment:
Q  209 cctttaagtttgatgtttgtaacatattggtcttttaagttatttc 254  Q
    ||||||||||| | |||||||||| ||||||| |||||||||||||    
T  35050802 cctttaagtttaaggtttgtaacagattggtcctttaagttatttc 35050757  T

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Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 2761694 - 2761634
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||| ||||||||||| |||||  ||| ||| | |||||||||||| |||||||    
T  2761694 aaattacatcataggtcctttaaatttgaaatttataataaattggtcttttaggttattt 2761634  T

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Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 9983022 - 9982962
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||| |  |||||||||||||||| | |||||||| |||| || ||||||||||||    
T  9983022 aaattacattaagggtcctttaagtttgaggattgtaacaaattgatcctttaagttattt 9982962  T

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Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 10356246 - 10356306
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||  || |||||||||||||||| |||||||||| ||| ||| ||||| ||||||    
T  10356246 aaattacactaggggtcctttaagtttgaggtttgtaacaaattagtcctttaaattattt 10356306  T

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Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 402
Target Start/End: Original strand, 20906785 - 20906841
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcc 402  Q
    ||||| ||||| |||| |||||||||||||||||| || ||||| ||||||| ||||    
T  20906785 aaaagagcaacttggttcactaaagctcccgcatatgcggggtctgggaaggggtcc 20906841  T

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Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 24059653 - 24059696
Alignment:
Q  193 aaattacatcagaggtcctttaagtttgatgtttgtaacatattg 237  Q
    |||||||| ||| |||||||||||||||| |||||||||||||||    
T  24059653 aaattacaccag-ggtcctttaagtttgaggtttgtaacatattg 24059696  T

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Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 402
Target Start/End: Original strand, 29016301 - 29016337
Alignment:
Q  366 taaagctcccgcatacgcagggtccgggaaggagtcc 402  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  29016301 taaagctcccgcatacgcagggtctgggaaggggtcc 29016337  T

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Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 208 - 252
Target Start/End: Original strand, 35225458 - 35225502
Alignment:
Q  208 tcctttaagtttgatgtttgtaacatattggtcttttaagttatt 252  Q
    |||||||||||| | |||||||||| ||||||| |||||||||||    
T  35225458 tcctttaagtttaaggtttgtaacagattggtcctttaagttatt 35225502  T

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Target: scaffold0223 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 347 - 432
Target Start/End: Complemental strand, 11264 - 11179
Alignment:
Q  347 aaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttac 432  Q
    |||||||||| |||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||    
T  11264 aaagggcaacctggtgcactagagctcccgcatatgcagggtccgggaaggtgtcccaccatttggtgtattgtaagcagccttac 11179  T

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Target: scaffold0311 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 10929 - 10850
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||| | ||| || |||||| ||||||    
T  10929 cactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattggacgcagccctaccctgtttttt 10850  T

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Target: scaffold0168 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 346 - 440
Target Start/End: Complemental strand, 30713 - 30619
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttt 440  Q
    |||||||||||  ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| || |||||| ||||    
T  30713 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccctaccctgtttt 30619  T

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Target: scaffold0180 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 434
Target Start/End: Original strand, 24132 - 24220
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccc 434  Q
    ||||||||||   ||| ||||| |||||||||||| |||||||||||||||| |||||| ||||| |||||||||| ||| ||||||||    
T  24132 aaaagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccc 24220  T

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Target: scaffold0258 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 346 - 433
Target Start/End: Original strand, 13023 - 13110
Alignment:
Q  346 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttacc 433  Q
    |||||||||||  ||| ||||||||| ||||||||||||||||| ||||||| |||||| ||||  |||||||||| ||| |||||||    
T  13023 aaaagggcaacccggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccaccattcggtgtattgtacgcagccttacc 13110  T

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Target: scaffold0954 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 3663 - 3584
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgtaggcaaccttaccctatttttt 442  Q
    |||||||||| ||||||||||||||| |||||||| |||||||||||  ||||||| || ||| ||||||| ||| ||||    
T  3663 cactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagccttaccttatatttt 3584  T

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Target: scaffold0279 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 1273 - 1227
Alignment:
Q  207 gtcctttaagtttgatgtttgtaacatattggtcttttaagttattt 253  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  1273 gtcctttaagtttgacgtttgtaacagattggtcctttaagttattt 1227  T

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Target: scaffold0049 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 59098 - 59017
Alignment:
Q  363 cactaaagctcccgcatacgcagggtccgggaaggagtcccatca--tttagtgtattgtaggcaaccttaccctatttttt 442  Q
    ||||||||||||||||||||||| ||| ||||||| |||||| ||  ||| |||||||||| |||  |||||||| ||||||    
T  59098 cactaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtacgcagtcttaccctgtttttt 59017  T

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Target: scaffold0187 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 421
Target Start/End: Original strand, 10072 - 10124
Alignment:
Q  369 agctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgta 421  Q
    |||||| ||||| |||||||||||||||| ||||||  |||| ||||||||||    
T  10072 agctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgta 10124  T

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Target: scaffold0187; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 421
Target Start/End: Original strand, 20400 - 20452
Alignment:
Q  369 agctcccgcatacgcagggtccgggaaggagtcccatcatttagtgtattgta 421  Q
    |||||| ||||| |||||||||||||||| ||||||  |||| ||||||||||    
T  20400 agctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgta 20452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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