View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2816_low_21 (Length: 380)

Name: NF2816_low_21
Description: NF2816
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2816_low_21
NF2816_low_21
[»] chr6 (14 HSPs)
chr6 (193-380)||(28996708-28996895)
chr6 (215-380)||(18339106-18339271)
chr6 (198-380)||(29743266-29743448)
chr6 (195-379)||(34948761-34948945)
chr6 (195-379)||(13837801-13837985)
chr6 (193-380)||(398595-398782)
chr6 (231-380)||(33229338-33229487)
chr6 (199-300)||(24697899-24698000)
chr6 (201-310)||(31028436-31028545)
chr6 (193-251)||(13646995-13647053)
chr6 (198-251)||(34385519-34385572)
chr6 (201-252)||(2753336-2753387)
chr6 (198-252)||(21149331-21149385)
chr6 (199-300)||(24695472-24695572)
[»] chr3 (21 HSPs)
chr3 (198-380)||(45182964-45183146)
chr3 (195-380)||(11018214-11018399)
chr3 (198-380)||(6930896-6931078)
chr3 (198-380)||(33040936-33041118)
chr3 (195-380)||(6503571-6503756)
chr3 (195-380)||(27935158-27935343)
chr3 (198-366)||(19565517-19565685)
chr3 (198-380)||(45335858-45336039)
chr3 (215-380)||(19390146-19390311)
chr3 (215-380)||(34084124-34084289)
chr3 (195-380)||(6269428-6269613)
chr3 (195-380)||(22968446-22968631)
chr3 (195-380)||(39771770-39771955)
chr3 (198-380)||(35514249-35514427)
chr3 (228-380)||(40081743-40081893)
chr3 (237-341)||(5135291-5135397)
chr3 (198-252)||(6890981-6891035)
chr3 (198-264)||(5354692-5354758)
chr3 (199-263)||(22922141-22922205)
chr3 (334-380)||(22922214-22922260)
chr3 (348-380)||(5135421-5135453)
[»] chr5 (27 HSPs)
chr5 (195-380)||(37254621-37254806)
chr5 (198-380)||(31680350-31680532)
chr5 (198-380)||(12278862-12279044)
chr5 (198-380)||(17332553-17332735)
chr5 (198-380)||(31501718-31501900)
chr5 (229-380)||(33430335-33430486)
chr5 (198-379)||(10033910-10034091)
chr5 (198-380)||(13817960-13818142)
chr5 (193-380)||(26283320-26283507)
chr5 (215-379)||(39657509-39657673)
chr5 (217-380)||(1776378-1776541)
chr5 (195-368)||(36293635-36293808)
chr5 (195-380)||(39434676-39434861)
chr5 (198-380)||(36291354-36291536)
chr5 (233-380)||(16155015-16155162)
chr5 (234-380)||(43068896-43069042)
chr5 (217-380)||(19985941-19986104)
chr5 (245-379)||(16333879-16334013)
chr5 (194-366)||(3155647-3155819)
chr5 (21-109)||(41369689-41369777)
chr5 (228-341)||(28801300-28801415)
chr5 (198-300)||(202622-202724)
chr5 (198-271)||(26543876-26543949)
chr5 (24-64)||(41286280-41286320)
chr5 (22-134)||(41366334-41366446)
chr5 (22-64)||(31178560-31178602)
chr5 (21-67)||(41337150-41337196)
[»] chr4 (44 HSPs)
chr4 (195-380)||(43143586-43143771)
chr4 (198-380)||(30216744-30216926)
chr4 (198-377)||(6690240-6690419)
chr4 (198-380)||(3292898-3293080)
chr4 (198-380)||(50205079-50205261)
chr4 (198-380)||(48989311-48989493)
chr4 (195-370)||(42333788-42333963)
chr4 (198-364)||(10352902-10353068)
chr4 (195-380)||(25930688-25930873)
chr4 (195-380)||(20129290-20129475)
chr4 (232-380)||(44156668-44156816)
chr4 (215-380)||(36382348-36382512)
chr4 (195-379)||(29319708-29319892)
chr4 (198-380)||(28877252-28877434)
chr4 (198-380)||(29995985-29996167)
chr4 (195-380)||(26439281-26439466)
chr4 (195-380)||(34407286-34407471)
chr4 (198-369)||(26448036-26448206)
chr4 (193-380)||(47500751-47500938)
chr4 (195-380)||(13012168-13012353)
chr4 (239-380)||(35545977-35546118)
chr4 (195-380)||(43355884-43356069)
chr4 (193-380)||(30077633-30077819)
chr4 (225-380)||(17511235-17511391)
chr4 (198-379)||(40528996-40529179)
chr4 (273-380)||(6235578-6235685)
chr4 (204-341)||(30109945-30110084)
chr4 (250-380)||(1817752-1817882)
chr4 (195-341)||(48129950-48130087)
chr4 (198-370)||(13392893-13393054)
chr4 (198-370)||(13396032-13396193)
chr4 (195-256)||(7769308-7769369)
chr4 (198-305)||(45194159-45194266)
chr4 (198-300)||(27363344-27363446)
chr4 (198-252)||(49908782-49908836)
chr4 (240-308)||(6254569-6254637)
chr4 (198-252)||(5517494-5517548)
chr4 (198-251)||(6212029-6212082)
chr4 (198-251)||(17554979-17555032)
chr4 (199-252)||(50720476-50720529)
chr4 (193-251)||(12680193-12680251)
chr4 (21-99)||(17249292-17249370)
chr4 (348-380)||(30110108-30110140)
chr4 (348-380)||(48130111-48130143)
[»] chr2 (23 HSPs)
chr2 (198-380)||(8147334-8147517)
chr2 (198-380)||(45418566-45418748)
chr2 (198-380)||(44084605-44084787)
chr2 (198-380)||(770977-771164)
chr2 (233-380)||(12756839-12756986)
chr2 (194-379)||(42439965-42440150)
chr2 (218-380)||(41251636-41251798)
chr2 (198-379)||(8059336-8059517)
chr2 (195-379)||(35962695-35962879)
chr2 (195-380)||(6403806-6403991)
chr2 (215-380)||(31581624-31581789)
chr2 (193-380)||(17445043-17445228)
chr2 (195-379)||(18981597-18981780)
chr2 (195-379)||(32127144-32127328)
chr2 (218-379)||(16405603-16405764)
chr2 (193-352)||(2958131-2958289)
chr2 (240-379)||(2285887-2286026)
chr2 (213-329)||(26237955-26238071)
chr2 (234-380)||(26162704-26162847)
chr2 (202-341)||(4555250-4555390)
chr2 (224-341)||(7072589-7072710)
chr2 (198-271)||(34523223-34523296)
chr2 (235-294)||(34905969-34906028)
[»] chr7 (22 HSPs)
chr7 (195-380)||(34389058-34389243)
chr7 (198-380)||(37002146-37002328)
chr7 (198-380)||(26624728-26624911)
chr7 (198-380)||(8867733-8867915)
chr7 (224-380)||(35090177-35090333)
chr7 (195-379)||(5555467-5555651)
chr7 (192-380)||(43184470-43184658)
chr7 (198-376)||(33685547-33685725)
chr7 (238-380)||(38638238-38638380)
chr7 (195-379)||(3114099-3114283)
chr7 (198-380)||(7002708-7002890)
chr7 (198-380)||(7048579-7048761)
chr7 (215-380)||(36630816-36630981)
chr7 (215-376)||(8394125-8394286)
chr7 (194-380)||(14777109-14777295)
chr7 (233-380)||(36658199-36658346)
chr7 (234-380)||(40920005-40920151)
chr7 (282-341)||(10868514-10868575)
chr7 (213-260)||(10876829-10876876)
chr7 (202-305)||(26502797-26502899)
chr7 (202-305)||(26589815-26589917)
chr7 (199-251)||(37966614-37966666)
[»] chr8 (16 HSPs)
chr8 (195-380)||(34136827-34137012)
chr8 (198-380)||(23402091-23402273)
chr8 (195-380)||(4403988-4404173)
chr8 (213-380)||(16788027-16788194)
chr8 (202-380)||(36408538-36408716)
chr8 (215-379)||(15838286-15838449)
chr8 (198-380)||(29728388-29728570)
chr8 (237-369)||(9877242-9877374)
chr8 (229-380)||(3648796-3648947)
chr8 (198-380)||(2729198-2729380)
chr8 (195-380)||(39914495-39914679)
chr8 (247-380)||(42230971-42231102)
chr8 (231-341)||(3435285-3435397)
chr8 (238-308)||(40470567-40470637)
chr8 (202-300)||(10397122-10397220)
chr8 (290-349)||(376459-376519)
[»] chr1 (17 HSPs)
chr1 (195-380)||(35907532-35907717)
chr1 (198-380)||(17445296-17445478)
chr1 (198-380)||(3828967-3829148)
chr1 (198-380)||(321379-321561)
chr1 (194-379)||(7433424-7433609)
chr1 (195-380)||(26144235-26144420)
chr1 (198-380)||(42310943-42311125)
chr1 (215-380)||(32982058-32982223)
chr1 (198-341)||(41972314-41972458)
chr1 (198-341)||(33489670-33489815)
chr1 (194-321)||(23313217-23313345)
chr1 (193-251)||(44352614-44352672)
chr1 (198-252)||(31866960-31867014)
chr1 (198-278)||(48901209-48901288)
chr1 (234-300)||(35951427-35951493)
chr1 (348-380)||(33489839-33489871)
chr1 (348-380)||(41972258-41972290)
[»] scaffold0502 (1 HSPs)
scaffold0502 (215-380)||(5230-5395)
[»] scaffold0154 (1 HSPs)
scaffold0154 (198-380)||(31463-31645)
[»] scaffold0041 (1 HSPs)
scaffold0041 (234-380)||(52944-53090)
[»] scaffold0069 (1 HSPs)
scaffold0069 (195-380)||(17822-18007)
[»] scaffold0002 (1 HSPs)
scaffold0002 (195-380)||(480459-480644)
[»] scaffold2142 (1 HSPs)
scaffold2142 (195-380)||(502-687)
[»] scaffold0769 (1 HSPs)
scaffold0769 (198-271)||(1260-1333)
[»] scaffold0012 (1 HSPs)
scaffold0012 (208-271)||(194021-194084)


Alignment Details
Target: chr6 (Bit Score: 156; Significance: 9e-83; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 193 - 380
Target Start/End: Original strand, 28996708 - 28996895
Alignment:
Q  193 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacact 292  Q
    |||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||  |||||||||||||||||||    
T  28996708 aacaggggcggtttcaccgcccggcgaccccgggcggtcgcccgagctcgatcgataatttttgcgcattagacccaacctaaaagtcaattaacacact 28996807  T
Q  293 tacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28996808 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatc 28996895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 215 - 380
Target Start/End: Original strand, 18339106 - 18339271
Alignment:
Q  215 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 314  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||   ||||| |||||||||||||||||||||||||| |||| |||    
T  18339106 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 18339205  T
Q  315 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18339206 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatc 18339271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 198 - 380
Target Start/End: Original strand, 29743266 - 29743448
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||||||| ||| |||||||||| |||||||||| |||||||||||||||||||||||||||||  ||||||  ||||||||| |||||     
T  29743266 gggcggtttcaccgtccgacgatcccgggcggttgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagttcattaacacatttacag 29743365  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||| || ||| ||||||    
T  29743366 aaagaaaaatttgggcaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacactagtgccggattcatc 29743448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 195 - 379
Target Start/End: Complemental strand, 34948945 - 34948761
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    |||||||||||  |||||  ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||| |||||| | ||||||||| |||    
T  34948945 catgggcggttctaccgtatggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 34948846  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcat 379  Q
    |||||||||||||||| |||||||||||||| |||||| ||||||| ||| | |||||||| |||||||||||||||||||||||    
T  34948845 caaaaagaaaaatttgggcaatctgaaaattgtcacacacaaatagatcttgaaattttatttagcacactattgacgggttcat 34948761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 195 - 379
Target Start/End: Original strand, 13837801 - 13837985
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    |||||||||||  |||||  |||||||||||||| |||| |||| ||||||||||||||||| ||||||||| |||| ||||||   || |||||| |||    
T  13837801 catgggcggttctaccgtatggcgaccccgggcgatcgctcgggttcgatcgataatttttgtacattagactcaacccaaaagcacatcaacacattta 13837900  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcat 379  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  13837901 caaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 13837985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 193 - 380
Target Start/End: Original strand, 398595 - 398782
Alignment:
Q  193 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacact 292  Q
    ||||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||   ||||||||| |    
T  398595 aacatgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatt 398694  T
Q  293 tacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    || ||||||||||||||| ||||| |||||||| ||||||| |||||||||| |||||||||| | ||||||||||||| | ||||||    
T  398695 tataaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatc 398782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 231 - 380
Target Start/End: Complemental strand, 33229487 - 33229338
Alignment:
Q  231 cgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcac 330  Q
    |||||||||||||||||| ||||||| |||||||||||||| |||||||| ||||||||| || |||||||||||||||| |||||||||||||||| ||    
T  33229487 cgcccgggctcgatcgatcatttttgtacattagacccaacccaaaagtccattaacacatttccaaaaagaaaaatttgggcaatctgaaaattcttac 33229388  T
Q  331 acgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||| ||||| ||||||| ||||||| ||||||||||||| ||| ||||||    
T  33229387 acgtaaataagtctcgggattttatttagcacactattgccggattcatc 33229338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 199 - 300
Target Start/End: Complemental strand, 24698000 - 24697899
Alignment:
Q  199 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaa 298  Q
    ||||||||||||| ||||||||||||| |  |||||||||||| ||||||||||||| |||||||| |||||| |||||| | |||||||||||||||||    
T  24698000 ggcggtttcaccgcccggcgaccccggacactcgcccgggctcaatcgataattttttcacattaggcccaacccaaaagcccattaacacacttacaaa 24697901  T
Q  299 aa 300  Q
    ||    
T  24697900 aa 24697899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 201 - 310
Target Start/End: Complemental strand, 31028545 - 31028436
Alignment:
Q  201 cggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaa 300  Q
    ||||||||||| |||||||||||| ||||| |||||| ||||||||||||||||||||||||||| |||||  |||||   ||||||||| |||||||||    
T  31028545 cggtttcaccgcccggcgaccccgagcggttgcccggactcgatcgataatttttgcacattagatccaacctaaaagctcattaacacatttacaaaaa 31028446  T
Q  301 gaaaaatttg 310  Q
    | ||| ||||    
T  31028445 ggaaattttg 31028436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 13646995 - 13647053
Alignment:
Q  193 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataat 251  Q
    |||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  13646995 aacaggggcggtttcaccacccggcgaccccgggcggtcgcccgggctcgatcgataat 13647053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 34385572 - 34385519
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataat 251  Q
    |||||||||||||| |||||||||||||||||| |||| |||||||||||||||    
T  34385572 gggcggtttcaccgcccggcgaccccgggcggttgccctggctcgatcgataat 34385519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 2753336 - 2753387
Alignment:
Q  201 cggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatt 252  Q
    ||||||||||||||||||||||  |||||||||||| |||| ||||||||||    
T  2753336 cggtttcaccgtccggcgaccctaggcggtcgcccgagctcaatcgataatt 2753387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 252
Target Start/End: Complemental strand, 21149385 - 21149331
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatt 252  Q
    |||| ||||||||| |||| |||| ||||||||||| |||||| |||||||||||    
T  21149385 gggcagtttcaccgcccggtgacctcgggcggtcgctcgggcttgatcgataatt 21149331  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 300
Target Start/End: Original strand, 24695472 - 24695572
Alignment:
Q  199 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaa 298  Q
    |||||||||||||||||  |||| ||| |  |||||| ||||  |||||| ||||||  ||||||| | |||| |||||| | |||||||||||||||||    
T  24695472 ggcggtttcaccgtccga-gacctcggacactcgcccaggctaaatcgatcattttttaacattaggctcaacccaaaagcccattaacacacttacaaa 24695570  T
Q  299 aa 300  Q
    ||    
T  24695571 aa 24695572  T

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Target: chr3 (Bit Score: 155; Significance: 3e-82; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 198 - 380
Target Start/End: Original strand, 45182964 - 45183146
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  45182964 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaa 45183063  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  45183064 aaagaaaaatttgggcaatctgaaaattctcacacacaaataggtctcggaattttatttagcacactattgacgggttcatc 45183146  T

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Target: chr3; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 195 - 380
Target Start/End: Complemental strand, 11018399 - 11018214
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||    
T  11018399 catgggcggtttcaccgtccggcgactccgggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 11018300  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  11018299 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcagaattttatttagcacacaattgacgggttcatc 11018214  T

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Target: chr3; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 198 - 380
Target Start/End: Complemental strand, 6931078 - 6930896
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||| |||||| ||||||||||| ||||||    
T  6931078 gggcggtttcaccgcccggcgaccccggacggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacatttacaa 6930979  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  6930978 aaagaaaaatttaggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatc 6930896  T

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Target: chr3; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 198 - 380
Target Start/End: Original strand, 33040936 - 33041118
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||| ||||||  |||||||||||||||||    
T  33040936 gggcggtttcaccgcccggcgaccccgggcggtcgctcgggctcgattgataatttttgcatattagacccaacccaaaagctaattaacacacttacaa 33041035  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33041036 aaagaaaaatttgaacaatttgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatc 33041118  T

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Target: chr3; HSP #5
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 195 - 380
Target Start/End: Complemental strand, 6503756 - 6503571
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||| |||||| |||||| ||||||||    
T  6503756 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgattatttttgcaaattagactcaacccaaaagccaattagcacactta 6503657  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||| |||||||| ||||| |||||||||    
T  6503656 caaaaagaaaaatttaagcaatctgaaaattctcacaggcaaataggtctcggatttttatttagcacacaattgatgggttcatc 6503571  T

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Target: chr3; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 195 - 380
Target Start/End: Original strand, 27935158 - 27935343
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    |||||| |||||||||| | ||| |||| |||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||   |||||||||||||    
T  27935158 catgggtggtttcaccgcctggcaaccctgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaacccaaaagctcattaacacactta 27935257  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| ||||| ||||||||||||||||||    
T  27935258 caaaaagaaaaatttgggcaatctgaaaattctcatacgaaaataggtctcggaattttatttagcatactattgacgggttcatc 27935343  T

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Target: chr3; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 198 - 366
Target Start/End: Complemental strand, 19565685 - 19565517
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||| ||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||  |||| || ||||||||| ||||||    
T  19565685 gggcggtttcaccgcccggcgatcccgggcggtcgcccgggttcaatcgataatttttgcacattagacccaaccaaaaaatccattaacacatttacaa 19565586  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacacta 366  Q
    |||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  19565585 aaagaaaaatttggacaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacacta 19565517  T

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Target: chr3; HSP #8
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 198 - 380
Target Start/End: Original strand, 45335858 - 45336039
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||| ||||||||| ||||||||||||||| ||| ||||||||||||| |||||||||||||||  |||||||| |||||||| ||||||    
T  45335858 gggcggtttcaccgcccggcgacctcgggcggtcgcccggactcaatcgataatttttacacattagacccaaccaaaaagtca-ttaacacatttacaa 45335956  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||||| || |||||||||||||||| |||||||||||||||| |||||||||| |||||||||| || ||| ||||||    
T  45335957 aaagaaaaatctgggcaatctgaaaattcttacacgcaaataggtcttggaattttatttagcacactagtgccggattcatc 45336039  T

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Target: chr3; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 215 - 380
Target Start/End: Original strand, 19390146 - 19390311
Alignment:
Q  215 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 314  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||  ||||||| ||||||||| ||||||||||||||||||| |||    
T  19390146 ggcgaccccgggcggtcgtccgggttcgatcgataatttttgcacattagactcaacctaaaagtctattaacacatttacaaaaagaaaaatttgggca 19390245  T
Q  315 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||| ||||||| |||||||||| |||||||||| ||||||||||||||| | ||||||    
T  19390246 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatc 19390311  T

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Target: chr3; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 215 - 380
Target Start/End: Complemental strand, 34084289 - 34084124
Alignment:
Q  215 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 314  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |  ||||  ||||||| ||||||||| ||||||||||||||||||| |||    
T  34084289 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattaaattcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggca 34084190  T
Q  315 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    || |||||||| |||||||||||||||||| |||||||||| |||||||||||||| |||||||||    
T  34084189 atatgaaaattatcacacgcaaataggtcttggaattttatttagcacactattgatgggttcatc 34084124  T

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Target: chr3; HSP #11
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 195 - 380
Target Start/End: Complemental strand, 6269613 - 6269428
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    |||||||||||  |||||   |||| |||||||||||| |||| |||||||||||||||||||||||||||| |||| |||||| | ||||||||| |||    
T  6269613 catgggcggttctaccgtgtagcgatcccgggcggtcgtccggactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 6269514  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||||||||||| |||||||||||||| ||||||| |||||||||| |||||||||| ||||||||||||||| | ||||||    
T  6269513 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatc 6269428  T

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Target: chr3; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 195 - 380
Target Start/End: Complemental strand, 22968631 - 22968446
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    |||||||||||  |||||   ||||||||||||||||| |||||||||||||||||||||||||||||||||  ||| |||||| | ||||||||| |||    
T  22968631 catgggcggttctaccgtgtagcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagacttaacccaaaagcccattaacacattta 22968532  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||||||||||| ||||||| |||||| ||||||| |||||||||| | |||||||| ||||||||||||||| | ||||||    
T  22968531 caaaaagaaaaatttgggcaatctaaaaattgtcacacgtaaataggtcttgaaattttatttagcacactattgacagtttcatc 22968446  T

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Target: chr3; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 195 - 380
Target Start/End: Original strand, 39771770 - 39771955
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    ||||||||||| ||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||| | ||||||||| |||    
T  39771770 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta 39771869  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
     ||||||||||||||| |||||||||||||| ||||||| |||||||||| | |||||||| |  |||||||||||| | ||||||    
T  39771870 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatc 39771955  T

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Target: chr3; HSP #14
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 198 - 380
Target Start/End: Original strand, 35514249 - 35514427
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||| ||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||| | |||| ||||| |||||||| ||||||||||    ||    
T  35514249 gggcagtttcaccgcccggcgaccccggacggtcgtccgggctcgatcgataattttcgcatactagatccaacccaaaagtccattaacacac----aa 35514344  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||||||||  |||| ||||||||||||| ||||||||||||| |||||||||| | ||||||||||||||||||||||    
T  35514345 aaagaaaaatttggacaatatgaaaattctcactcgcaaataggtctaggaattttattttgcacactattgacgggttcatc 35514427  T

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Target: chr3; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 228 - 380
Target Start/End: Complemental strand, 40081893 - 40081743
Alignment:
Q  228 ggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattct 327  Q
    ||||||||||||||||||||||||||||| ||||||||| |||| ||||||   ||||||||| ||||||||||||||||||| ||||| |||||||| |    
T  40081893 ggtcgcccgggctcgatcgataatttttgaacattagactcaac-caaaagctcattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgt 40081795  T
Q  328 cacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||| ||| || ||||| | ||||||||||||||||||||||||    
T  40081794 cacacgcaaatagatcttgg-attttttttagcacactattgacgggttcatc 40081743  T

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Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 237 - 341
Target Start/End: Original strand, 5135291 - 5135397
Alignment:
Q  237 ggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc--aatctgaaaattctcacacgc 334  Q
    |||||||||||| ||||||| ||||||||||||||  |||||   |||||||||||||||||||||||||||||  |  |||| |||||||||||||| |    
T  5135291 ggctcgatcgattatttttgtacattagacccaacctaaaagctcattaacacacttacaaaaagaaaaatttggacaaaatccgaaaattctcacacac 5135390  T
Q  335 aaatagg 341  Q
    |||||||    
T  5135391 aaatagg 5135397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 198 - 252
Target Start/End: Original strand, 6890981 - 6891035
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatt 252  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  6890981 gggcggtttcaccgcccggcgacaccgggcggtcgcccgggctcgatcgataatt 6891035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 5354692 - 5354758
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattag 264  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||  |||||||  ||||||||    
T  5354692 gggcagtttcaccgcccggcgaccccgggcggtcgcccgggctcgatccttaattttctcacattag 5354758  T

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Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 22922141 - 22922205
Alignment:
Q  199 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacatta 263  Q
    ||||||| ||||||  ||||| ||||||||||||| |||||||||||||| ||||||||||||||    
T  22922141 ggcggttccaccgtatggcgatcccgggcggtcgctcgggctcgatcgatcatttttgcacatta 22922205  T

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Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 334 - 380
Target Start/End: Original strand, 22922214 - 22922260
Alignment:
Q  334 caaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||| ||| |||||||||| || |||||||||||||||||||||    
T  22922214 caaatagatcttggaattttatttaacacactattgacgggttcatc 22922260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 348 - 380
Target Start/End: Original strand, 5135421 - 5135453
Alignment:
Q  348 aattttatatagcacactattgacgggttcatc 380  Q
    |||||||| ||||||||||||||||||||||||    
T  5135421 aattttatttagcacactattgacgggttcatc 5135453  T

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Target: chr5 (Bit Score: 154; Significance: 1e-81; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 195 - 380
Target Start/End: Original strand, 37254621 - 37254806
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    |||||||||||||||||  |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37254621 catgggcggtttcaccgctcggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagacccaacccaaaagtcaattaacacactta 37254720  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  37254721 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatc 37254806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 198 - 380
Target Start/End: Original strand, 31680350 - 31680532
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||||||    
T  31680350 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttccgcattagacccaacccaaaagccaattaacacacttacaa 31680449  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31680450 aaagaaaaatttgggcaatctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatc 31680532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 198 - 380
Target Start/End: Complemental strand, 12279044 - 12278862
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||    
T  12279044 gggcggtttcaccgcccggcgatcccgggcggtcgcccggactcgatcgataatttttgcacattagacccaacccaaaggccaattaacacacttacaa 12278945  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  12278944 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacaggttcatc 12278862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 198 - 380
Target Start/End: Complemental strand, 17332735 - 17332553
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||    
T  17332735 gggcggtttcaccgcccggcgaccccgggcgttcgcccgggctcgatcgataatttttgcatattagacccaacccaaaagccaattaacacacttacaa 17332636  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  17332635 aaagaaaaatttgggcaatctgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatc 17332553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 198 - 380
Target Start/End: Complemental strand, 31501900 - 31501718
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  31501900 gggcggtttcaccgcccggcgaccccgggcgattgcccgggctcgatcgataatttttgcacattagacccaacccaaaagccaattaacacacttacaa 31501801  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| | |||||||    
T  31501800 aaagaaaaatttgggcaatctgaaaattctcgcacgcaaataggtctcgaaattttatttagcacactattgatgagttcatc 31501718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 229 - 380
Target Start/End: Original strand, 33430335 - 33430486
Alignment:
Q  229 gtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctc 328  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33430335 gtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctc 33430434  T
Q  329 acacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33430435 acacgcaaataggtctcggaattttatttagcacactattgacgggttcatc 33430486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 198 - 379
Target Start/End: Original strand, 10033910 - 10034091
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    ||||||||  |||||  ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||| |||||| | ||||||||| ||||||    
T  10033910 gggcggttctaccgtatggcgaccccggacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 10034009  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcat 379  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  10034010 aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 10034091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 198 - 380
Target Start/End: Original strand, 13817960 - 13818142
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    ||||||||  |||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||| | ||||||||| ||||||    
T  13817960 gggcggttctaccgtatggcgaccccgggcggtcgctcgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 13818059  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||| |||| ||||| |||||||||||||||||| |||||    
T  13818060 aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaaatttatttagcacactattgacgggctcatc 13818142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 193 - 380
Target Start/End: Complemental strand, 26283507 - 26283320
Alignment:
Q  193 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacact 292  Q
    ||||||||||||| ||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||  ||||||||| |    
T  26283507 aacatgggcggttccaccgtgtagcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacatt 26283408  T
Q  293 tacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    || ||||||||||||||| |||||||||||||| ||||||| |||||||||| |||||||||| | ||||||||||||| | ||||||    
T  26283407 tataaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatc 26283320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 215 - 379
Target Start/End: Complemental strand, 39657673 - 39657509
Alignment:
Q  215 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 314  Q
    ||||||||| | ||||||  |||||||||| ||||||||||||||||||||| |||| ||||||   ||||||||| ||||||||||||||||||| |||    
T  39657673 ggcgaccccagacggtcgttcgggctcgattgataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggca 39657574  T
Q  315 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcat 379  Q
    ||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  39657573 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 39657509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 217 - 380
Target Start/End: Complemental strand, 1776541 - 1776378
Alignment:
Q  217 cgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaat 316  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |  ||||  ||||||| ||||||||| ||||||||||||||||||| |||||    
T  1776541 cgaccccgggcggtcgcccgggctcgatcgataatttttgtacattaaagtcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggcaat 1776442  T
Q  317 ctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
     |||||||| |||||||||||||||||| |||||||||| ||||||||||| ||| ||||||||    
T  1776441 ttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactatcgacaggttcatc 1776378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 195 - 368
Target Start/End: Complemental strand, 36293808 - 36293635
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    |||||||||||  |||||  |||||||||| ||||||| |||| |||||||||||||||||| ||||||||| |||| |||||| | ||||||||| |||    
T  36293808 catgggcggttctaccgtgtggcgaccccgagcggtcgtccggactcgatcgataatttttgtacattagactcaacccaaaagcccattaacacattta 36293709  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactatt 368  Q
    |||||||||||||||| |||||||||||||| ||||||| |||||||||| |||||||||| ||||||||||||    
T  36293708 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactatt 36293635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 195 - 380
Target Start/End: Original strand, 39434676 - 39434861
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    |||||||||||  |||||  |||||||| |||||||||||||||||||||||||||||||| |||||||||| |||| |||||| | ||||||||| |||    
T  39434676 catgggcggttctaccgtgtggcgaccctgggcggtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacattta 39434775  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||| |||||||||| |||||||||||||| ||||| | ||||||||||  ||||||||| ||||||||||||||| | ||||||    
T  39434776 caaaatgaaaaatttgggcaatctgaaaattgtcacatgtaaataggtctttgaattttatttagcacactattgacagtttcatc 39434861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 198 - 380
Target Start/End: Original strand, 36291354 - 36291536
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||| ||| |||| ||||||||||| ||||| |||||| ||||||||||||||||||| | |||  ||||||  ||||||||| ||||||    
T  36291354 gggcggtttcaccgcccgccgactccgggcggtcgtccgggttcgatcaataatttttgcacattagatctaacctaaaagttcattaacacatttacaa 36291453  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||| ||||||| |||||| | |||| |||||||||||| ||||||||| || |||||||||||||||||||||    
T  36291454 aaagaaaaatttgggcaatctcaaaattattacacacaaataggtctcagaattttatttaacacactattgacgggttcatc 36291536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 233 - 380
Target Start/End: Original strand, 16155015 - 16155162
Alignment:
Q  233 cccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacac 332  Q
    |||||||||||||||||||||||||||||||||| |||| |||||| | ||||||||| ||| ||||||||||||||  |||||||||||||| ||||||    
T  16155015 cccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttaggcaatctgaaaattgtcacac 16155114  T
Q  333 gcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||||||| |||||||||| ||||||||||||||| | ||||||    
T  16155115 gcaaataggtcttggaattttatttagcacactattgacagattcatc 16155162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 234 - 380
Target Start/End: Original strand, 43068896 - 43069042
Alignment:
Q  234 ccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacg 333  Q
    |||||||||||| ||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||||||||||| |||||||||||||||| ||| |    
T  43068896 ccgggctcgatcaataattttttcacattagacccaacccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattcttacatg 43068995  T
Q  334 caaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
     ||||| ||||||||||||||| ||||||||||||| ||| ||||||    
T  43068996 taaataagtctcggaattttatttagcacactattgccggattcatc 43069042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 217 - 380
Target Start/End: Original strand, 19985941 - 19986104
Alignment:
Q  217 cgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaat 316  Q
    ||||| |||||||||| ||| ||||||||||||||||||||||||||||  |||| |||||||| |||| |||| ||||||||||||||||||| | |||    
T  19985941 cgacctcgggcggtcgtccgagctcgatcgataatttttgcacattagattcaacccaaaagtccattagcacatttacaaaaagaaaaatttgggtaat 19986040  T
Q  317 ctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    || |||||| |||||||||||||||||| | |||||||| || |||||||||||| ||||||||    
T  19986041 ctaaaaattatcacacgcaaataggtcttgaaattttatttaacacactattgacaggttcatc 19986104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 245 - 379
Target Start/End: Complemental strand, 16334013 - 16333879
Alignment:
Q  245 cgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtct 344  Q
    |||||||||||||||||||||  |||| |||||| | ||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  16334013 cgataatttttgcacattagattcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtct 16333914  T
Q  345 cggaattttatatagcacactattgacgggttcat 379  Q
     |||||||||| ||||||||||||||||| |||||    
T  16333913 tggaattttatttagcacactattgacggattcat 16333879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 194 - 366
Target Start/End: Complemental strand, 3155819 - 3155647
Alignment:
Q  194 acatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactt 293  Q
    ||||||||||||  | |||  ||||| ||||||||||||| ||||||||||| |||||||||||||||| ||| ||||  ||||||| ||||||||| ||    
T  3155819 acatgggcggttctatcgtatggcgatcccgggcggtcgctcgggctcgatcaataatttttgcacattcgactcaacctaaaagtccattaacacattt 3155720  T
Q  294 acaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacacta 366  Q
    | |||||||||||||||  ||||||||||||| |||||||||||||| ||| |||||||||| ||||||||||    
T  3155719 ataaaaagaaaaatttggacaatctgaaaattgtcacacgcaaatagatcttggaattttatttagcacacta 3155647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 41369777 - 41369689
Alignment:
Q  21 tattttaatagaaggatacaaatcagcaatgcaaaatcctcccaataactttattgattcctccattgctgatttgaactctaatatgt 109  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41369777 tattttaatagaaggatacaaatcagcaatgcaaaatccttccaataactttattgattcctccattgctgatttgaactctaatatgt 41369689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 228 - 341
Target Start/End: Original strand, 28801300 - 28801415
Alignment:
Q  228 ggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaattt--gagcaatctgaaaatt 325  Q
    |||||||| ||||||||||||||||||||||||||||| ||||  |||||| | ||||||||||||||||||||||||||||  ||  ||| ||||||||    
T  28801300 ggtcgccctggctcgatcgataatttttgcacattagatccaaaccaaaagcccattaacacacttacaaaaagaaaaatttgggaaaaatatgaaaatt 28801399  T
Q  326 ctcacacgcaaatagg 341  Q
    ||||||||||||||||    
T  28801400 ctcacacgcaaatagg 28801415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 300
Target Start/End: Original strand, 202622 - 202724
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||| ||| ||||||  || |||||||||||||||||||||||||| || |||||||  | ||| |||||| | ||||| ||||| ||||    
T  202622 gggcggtttcaccgcccgacgaccctaggtggtcgcccgggctcgatcgataatttgtgtacattaggtcgaacccaaaagcccattaagacactaacaa 202721  T
Q  298 aaa 300  Q
    |||    
T  202722 aaa 202724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 198 - 271
Target Start/End: Complemental strand, 26543949 - 26543876
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaac 271  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||  ||||||   |||||||| ||||||    
T  26543949 gggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgatccgtaatttcctcacattaggcccaac 26543876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 41286320 - 41286280
Alignment:
Q  24 tttaatagaaggatacaaatcagcaatgcaaaatcctccca 64  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  41286320 tttaatagaaggatacaaatcaacaatgcaaaatcctccca 41286280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 41366446 - 41366334
Alignment:
Q  22 attttaatagaaggatacaaatcagcaatgcaaaatcctcccaataactttattgattcctccattgctgatttgaactctaatatgtgtctactctttt 121  Q
    ||||||||||||||||||||||| ||||   ||||||||||||||| ||| | |  ||||| |||||||||||| ||| ||  |  |||| || ||||||    
T  41366446 attttaatagaaggatacaaatctgcaaaagaaaatcctcccaatagcttaaatatttccttcattgctgatttaaacacttcttggtgtttattctttt 41366347  T
Q  122 ttccaaaagctgc 134  Q
    ||||||| |||||    
T  41366346 ttccaaatgctgc 41366334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 31178560 - 31178602
Alignment:
Q  22 attttaatagaaggatacaaatcagcaatgcaaaatcctccca 64  Q
    ||||||||||||||||||| ||||||||| |||||||||||||    
T  31178560 attttaatagaaggatacacatcagcaatacaaaatcctccca 31178602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 41337196 - 41337150
Alignment:
Q  21 tattttaatagaaggatacaaatcagcaatgcaaaatcctcccaata 67  Q
    ||||||||||||||||||||| |||||||| |||||| |||||||||    
T  41337196 tattttaatagaaggatacaagtcagcaatacaaaattctcccaata 41337150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 154; Significance: 1e-81; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 195 - 380
Target Start/End: Complemental strand, 43143771 - 43143586
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||    
T  43143771 catgggcggtttcaccgtccgacgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 43143672  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||    
T  43143671 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatc 43143586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 198 - 380
Target Start/End: Complemental strand, 30216926 - 30216744
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  30216926 gggcggattcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaa 30216827  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  30216826 aaagaaaaatttgggcaatctgaaaattctcacatgcaaatagatctcggaattttatttagcacactattgacgggttcatc 30216744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 198 - 377
Target Start/End: Complemental strand, 6690419 - 6690240
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  6690419 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaa 6690320  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttc 377  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  6690319 aaagaaaaatttgggcaaactgaaaattctcacacgcaaataggtctcgaaattttatttagcacactattgacgggttc 6690240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 198 - 380
Target Start/End: Complemental strand, 3293080 - 3292898
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||| || | |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  3293080 gggcggtttcaccgcccagtgaccccgggcggtcgcccgggctcgatcgataatttttgcccattagacccaacccaaaagccaattaacacacttacaa 3292981  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  3292980 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatc 3292898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 198 - 380
Target Start/End: Complemental strand, 50205261 - 50205079
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||    
T  50205261 gggcggtttcaccgtccggcgatcccgggcggtcgcccgagctcgatcgataatttttgcacattagatccaacccaaaagccaattaacacacttacaa 50205162  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  50205161 aaagaaaaaattggacaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatc 50205079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 198 - 380
Target Start/End: Original strand, 48989311 - 48989493
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||| ||||||||| ||| |||| ||||||||||  ||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  48989311 gggcagtttcaccgcccgacgactccgggcggtcaaccgggttcgatcgataatttttgcacattaaacccaactcaaaagtccattaacacacttacaa 48989410  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  48989411 aaagaaaaatttgggcaatctgaaaattctcatacgcaaataggtctcggaattttatttagcacactattgacgggttcatc 48989493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 195 - 370
Target Start/End: Complemental strand, 42333963 - 42333788
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    ||||| |||||||||||||| |||| |||||||||||| |||||||| |||||||||||||||||||||||| |||| |||||| |||||||||||||||    
T  42333963 catggacggtttcaccgtccagcgatcccgggcggtcgtccgggctcaatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 42333864  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattga 370  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  42333863 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 42333788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 198 - 364
Target Start/End: Complemental strand, 10353068 - 10352902
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||| ||||||||| ||||||    
T  10353068 gggcggtttcaccgtccggcgacccctggcggtcgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagtccattaacacatttacaa 10352969  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacac 364  Q
    || |||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  10352968 aaggaaaaatttgggcaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacac 10352902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 195 - 380
Target Start/End: Original strand, 25930688 - 25930873
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    |||||||||||  |||||  |||||||| |||||||||||||||||||||| ||||||||||||||||| || |||| |||||| | ||||||||| |||    
T  25930688 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatctataatttttgcacattaaactcaacccaaaagcccattaacacattta 25930787  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||||||||||| ||||| |||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  25930788 caaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatc 25930873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 195 - 380
Target Start/End: Original strand, 20129290 - 20129475
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    ||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| | ||||||||| |||    
T  20129290 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 20129389  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||||||||||| |||||||||||||| ||||||| ||||||||||  ||||||||| | ||||||||||||| | ||||||    
T  20129390 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttagaattttatttggcacactattgacagtttcatc 20129475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 232 - 380
Target Start/End: Original strand, 44156668 - 44156816
Alignment:
Q  232 gcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcaca 331  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||  |||||||||||||||| ||    
T  44156668 gcccgggctcaaccgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaattttggacaatctgaaaattctctca 44156767  T
Q  332 cgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44156768 cgcaaataggtctcggaattttatttagcacactattgacgggttcatc 44156816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 215 - 380
Target Start/End: Complemental strand, 36382512 - 36382348
Alignment:
Q  215 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 314  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||  ||||||| ||||||||| |||||||| ||||||||||  ||    
T  36382512 ggcgaccccgggcggtcgcccgggctcgatccataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaa-gaaaaatttggaca 36382414  T
Q  315 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  36382413 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatc 36382348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 195 - 379
Target Start/End: Complemental strand, 29319892 - 29319708
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    |||||||||||  |||||  || |||||| |||||||| || |||||||||||||||||||||||||||||| |||| |||||  | ||||||||| |||    
T  29319892 catgggcggttctaccgtatggtgacccctggcggtcgtccaggctcgatcgataatttttgcacattagactcaacccaaaatcccattaacacattta 29319793  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcat 379  Q
    ||||||||||||||||||||||||||||||| |||||| |||||| |||| |||||||||| |||||||||||||||||||||||    
T  29319792 caaaaagaaaaatttgagcaatctgaaaattgtcacacacaaataagtcttggaattttatttagcacactattgacgggttcat 29319708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 198 - 380
Target Start/End: Complemental strand, 28877434 - 28877252
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    ||||||||||||||||||  ||||||| ||||||||  ||||| ||||||||||||||||||||||||  ||||  |||||  ||||||||| |||| ||    
T  28877434 gggcggtttcaccgtccgatgaccccgtgcggtcgcttgggctagatcgataatttttgcacattagattcaacctaaaagctaattaacacgcttataa 28877335  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  28877334 aaagaaaaatttgggaaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgatgggttcatc 28877252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 198 - 380
Target Start/End: Complemental strand, 29996167 - 29995985
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||| ||| ||| ||||| |||||| |||| |||||||||||||||||| ||||||||| ||||  ||||||| ||||||||| |||| |    
T  29996167 gggcggtttcaccgcccgacgatcccggacggtcgtccggactcgatcgataatttttgtacattagactcaaccaaaaagtccattaacacatttacga 29996068  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||| ||||||||||||||||  ||||||||||| ||||||||||||||  |||||||||||||||| ||||||    
T  29996067 aaagaaaaatttgggcaatctgaaaattcttgcacgcaaatagttctcggaattttattaagcacactattgacggattcatc 29995985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 195 - 380
Target Start/End: Complemental strand, 26439466 - 26439281
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    ||||||||||| ||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||| | ||||||||| |||    
T  26439466 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta 26439367  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
     ||||||||||||||| |||||||||||||| ||||||| |||||||||| | |||||||| |  |||||||||||| | ||||||    
T  26439366 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatc 26439281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 195 - 380
Target Start/End: Complemental strand, 34407471 - 34407286
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    ||||||||||| ||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||| | ||||||||| |||    
T  34407471 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta 34407372  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
     ||||||||||||||| |||||||||||||| ||||||| |||||||||| | |||||||| |  |||||||||||| | ||||||    
T  34407371 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatc 34407286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 198 - 369
Target Start/End: Original strand, 26448036 - 26448206
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||| |||||||| ||| ||| ||| |||| ||||||||||||||||||||||||| | | ||| |||||||| ||||||||||||||||    
T  26448036 gggcggtttcaccgcccggcgactccgtgcgatcgtccggactcgatcgataatttttgcacattaaatctaacccaaaagtccattaacacacttacaa 26448135  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattg 369  Q
    ||| ||||||||| |||||||||||||||||| || ||||||||| |||||||||||| |||||||||||||    
T  26448136 aaa-aaaaatttgggcaatctgaaaattctcatacacaaataggtttcggaattttatttagcacactattg 26448206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 193 - 380
Target Start/End: Original strand, 47500751 - 47500938
Alignment:
Q  193 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacact 292  Q
    ||||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||   ||||||||| |    
T  47500751 aacatgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatt 47500850  T
Q  293 tacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||  |||||||||||||| ||||| |||||||| ||||||| |||||||||| |||||||||| | ||||||||||||| | ||||||    
T  47500851 tatgaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatc 47500938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 195 - 380
Target Start/End: Original strand, 13012168 - 13012353
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    ||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||  |||||   ||||||||| |||    
T  13012168 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagattcaaccaaaaagctcattaacacattta 13012267  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
     ||||||||||||||| ||||| |||||||| ||||||| |||||||||| |||||||||| | ||||||||||||| | ||||||    
T  13012268 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatc 13012353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 239 - 380
Target Start/End: Original strand, 35545977 - 35546118
Alignment:
Q  239 ctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaat 338  Q
    ||||||||| ||||||||| ||| ||||||||| |||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  35545977 ctcgatcgacaatttttgcgcatcagacccaacccaaaagccaattaacacacttacaaaaagaaaattttgggcaatctgaaaattctcacacgcaaat 35546076  T
Q  339 aggtctcggaattttatatagcacactattgacgggttcatc 380  Q
     |||||| ||||||||| |||||||||||||| |||||||||    
T  35546077 gggtctctgaattttatttagcacactattgatgggttcatc 35546118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 195 - 380
Target Start/End: Original strand, 43355884 - 43356069
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    ||||||||||| ||||||   |||||||| ||| |||||||||||||| ||||||||||||||||||||||| |||| |||||| | ||||||||| |||    
T  43355884 catgggcggttccaccgtgtagcgaccccaggcagtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta 43355983  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
     ||||||||||||||| |||||||||||||| ||||||| |||||||||| | |||||||| |  |||||||||||| | ||||||    
T  43355984 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatc 43356069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 193 - 380
Target Start/End: Complemental strand, 30077819 - 30077633
Alignment:
Q  193 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacact 292  Q
    |||| |||||||||||||| ||| ||||| ||||||||||||| ||||| |||||||| ||||||||||||||||||||  ||||||  ||||||||| |    
T  30077819 aacaggggcggtttcaccgcccg-cgacctcgggcggtcgcccaggctcaatcgataaattttgcacattagacccaaccaaaaagttcattaacacatt 30077721  T
Q  293 tacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||||||||  ||||||||||||| | |||| ||||||||||| | |||||||| |||||||||| || ||| ||||||    
T  30077720 tacaaaaagaaaaatttggacaatctgaaaatttttacacacaaataggtcttgaaattttatttagcacactagtgccggattcatc 30077633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 225 - 380
Target Start/End: Complemental strand, 17511391 - 17511235
Alignment:
Q  225 ggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaat 324  Q
    ||||||||||| | |||||||||||||||||||||||||||| |||| |||||| | ||||||||| ||||||||||||||||||| ||||| |||||||    
T  17511391 ggcggtcgcccagactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatttgaaaat 17511292  T
Q  325 tctcacacgcaaataggtctcgg-aattttatatagcacactattgacgggttcatc 380  Q
    | | |||||||||||||||| || |||||||| ||||||| ||||||  ||||||||    
T  17511291 tgttacacgcaaataggtcttggaaattttatttagcacattattgatcggttcatc 17511235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 198 - 379
Target Start/End: Original strand, 40528996 - 40529179
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcg--gtcgcccgggctcgatcgataatttttgcacattagacccaac-tcaaaagtcaattaacacactta 294  Q
    ||||||||  |||||  |||||||| |||||  |||| |||| ||||||||||||||||||||||||| || |||| | |||| ||| |||||||| |||    
T  40528996 gggcggttctaccgtatggcgaccctgggcgaggtcgtccggactcgatcgataatttttgcacattaaactcaacctaaaaactca-ttaacacattta 40529094  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcat 379  Q
    ||||||||||||||||  |||| |||||||| ||||| |||||||||||| |||||||||| |||||||||||||||||||||||    
T  40529095 caaaaagaaaaatttggacaatttgaaaattgtcacatgcaaataggtcttggaattttatttagcacactattgacgggttcat 40529179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 273 - 380
Target Start/End: Original strand, 6235578 - 6235685
Alignment:
Q  273 caaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacg 372  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||| |||||||| |||||||||||||||||| |||||||||| ||||||||||||||||    
T  6235578 caaaagtccattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacg 6235677  T
Q  373 ggttcatc 380  Q
    ||||||||    
T  6235678 ggttcatc 6235685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 204 - 341
Target Start/End: Original strand, 30109945 - 30110084
Alignment:
Q  204 tttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaa 303  Q
    |||||||| ||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||  | |||| | ||||||||||||||||||||||    
T  30109945 tttcaccgcccgacgaccccggacggtcgcccggactcgatcgataatttttgcacattagacccaaacccaaagaccattaacacacttacaaaaagaa 30110044  T
Q  304 aaatttgagc--aatctgaaaattctcacacgcaaatagg 341  Q
    |||||||  |  ||| |||||| |||||||||||||||||    
T  30110045 aaatttggacaaaatatgaaaaatctcacacgcaaatagg 30110084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 250 - 380
Target Start/End: Original strand, 1817752 - 1817882
Alignment:
Q  250 atttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaa 349  Q
    |||||||||||||||| ||||  |||||||| ||||| ||| ||| ||||||||||||||| ||||||| |||||||| |||||||||||||||||||||    
T  1817752 atttttgcacattagatccaatccaaaagtccattaatacatttataaaaagaaaaatttgggcaatctaaaaattcttacacgcaaataggtctcggaa 1817851  T
Q  350 ttttatatagcacactattgacgggttcatc 380  Q
    |||||| || |||||||||| ||| ||||||    
T  1817852 ttttatttaacacactattgtcggattcatc 1817882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 195 - 341
Target Start/End: Original strand, 48129950 - 48130087
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    |||||||||||| |||| |||||||||     |||||| ||||||||||||||||||||||||| |||||||||||| ||||||   |||||||||||||    
T  48129950 catgggcggtttaaccgcccggcgacc----tcggtcgaccgggctcgatcgataatttttgcatattagacccaacccaaaagctcattaacacactta 48130045  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaatagg 341  Q
    |||||||||||||||| |     |||||| |||||||||||||||||    
T  48130046 caaaaagaaaaatttggg-----tgaaaactctcacacgcaaatagg 48130087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 198 - 370
Target Start/End: Complemental strand, 13393054 - 13392893
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||| || |||||||||| ||||||||||||||| |||||| | ||||||| |||| | ||||| | ||| |  |          |||||    
T  13393054 gggcggtttcaccgcccagcgaccccggacggtcgcccgggctcaatcgatgacttttgcatattacatccaac-ctaaattgta----------tacaa 13392966  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattga 370  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  13392965 aaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13392893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 198 - 370
Target Start/End: Complemental strand, 13396193 - 13396032
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||| || |||||||||| ||||||||||||||| |||||| | ||||||| |||| | ||||| | ||| |  |          |||||    
T  13396193 gggcggtttcaccgcccagcgaccccggacggtcgcccgggctcaatcgatgacttttgcatattacatccaac-ctaaattgta----------tacaa 13396105  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattga 370  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  13396104 aaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13396032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 7769308 - 7769369
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttg 256  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7769308 catgggcggtttcaccgtccggcgaccccaggcggtcgcccgggctcgatcgataatttttg 7769369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 198 - 305
Target Start/End: Original strand, 45194159 - 45194266
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||| ||||||||| ||| ||||||| |||| | |||||| ||||||| ||||||||||||||||| || |||| |||||||| ||||||||||||||||    
T  45194159 gggcagtttcaccgcccgacgaccccaggcgattgcccggactcgatcaataatttttgcacattaaactcaacccaaaagtccattaacacacttacaa 45194258  T
Q  298 aaagaaaa 305  Q
    ||| ||||    
T  45194259 aaaaaaaa 45194266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 198 - 300
Target Start/End: Original strand, 27363344 - 27363446
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    ||||||||| |||||  ||||||| |||||||||||||||||||||||||   |||||||| ||||| |||||| |||||| | ||||||||||||||||    
T  27363344 gggcggttttaccgtatggcgacctcgggcggtcgcccgggctcgatcgaatttttttgcatattaggcccaacccaaaagcccattaacacacttacaa 27363443  T
Q  298 aaa 300  Q
    |||    
T  27363444 aaa 27363446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 198 - 252
Target Start/End: Complemental strand, 49908836 - 49908782
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatt 252  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  49908836 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatt 49908782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 6254569 - 6254637
Alignment:
Q  240 tcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatt 308  Q
    |||||||||||||||||||||||| ||||||| |||||| |||||||||||||| |||||| |||||||    
T  6254569 tcgatcgataatttttgcacattaaacccaacccaaaagacaattaacacacttgcaaaaaaaaaaatt 6254637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 198 - 252
Target Start/End: Complemental strand, 5517548 - 5517494
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatt 252  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  5517548 gggcggtttcaccgcccggcgaccccgggcggtcgcctgggctcgatcgataatt 5517494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 6212082 - 6212029
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataat 251  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  6212082 gggcggtttcaccgtccggcgacctcgggcggtcgcccgagctcgatcgataat 6212029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 198 - 251
Target Start/End: Original strand, 17554979 - 17555032
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataat 251  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  17554979 gggcggtttcaccgtccgacgaccccgggtggtcgcccgggctcgatcgataat 17555032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 252
Target Start/End: Complemental strand, 50720529 - 50720476
Alignment:
Q  199 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatt 252  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| ||| ||||||    
T  50720529 ggcggtttcaccgcccggcgacctcgggcggtcgcccgggctcaatcaataatt 50720476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 251
Target Start/End: Complemental strand, 12680251 - 12680193
Alignment:
Q  193 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataat 251  Q
    |||| |||||||||||||| || || ||||| |||||| ||||||||||||||||||||    
T  12680251 aacaggggcggtttcaccgcccagcaaccccaggcggtggcccgggctcgatcgataat 12680193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 17249292 - 17249370
Alignment:
Q  21 tattttaatagaaggatacaaatcagcaatgcaaaatcctcccaataactttattgattcctccattgctgatttgaac 99  Q
    |||||| |||||||||||||||||| |||| |||||||||||||| ||  | | |  |||||| |||||||||||||||    
T  17249292 tattttgatagaaggatacaaatcaacaatacaaaatcctcccaacaaactcactatttcctctattgctgatttgaac 17249370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 348 - 380
Target Start/End: Original strand, 30110108 - 30110140
Alignment:
Q  348 aattttatatagcacactattgacgggttcatc 380  Q
    |||||||| ||||||||||||||||||||||||    
T  30110108 aattttatttagcacactattgacgggttcatc 30110140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 348 - 380
Target Start/End: Original strand, 48130111 - 48130143
Alignment:
Q  348 aattttatatagcacactattgacgggttcatc 380  Q
    |||||||| ||||||||||||||||||||||||    
T  48130111 aattttatttagcacactattgacgggttcatc 48130143  T

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Target: chr2 (Bit Score: 152; Significance: 2e-80; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 198 - 380
Target Start/End: Original strand, 8147334 - 8147517
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8147334 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatctttgcacattagacccaactcaaaagtcaattaacacacttacaa 8147433  T
Q  298 aaagaaaaatttgagcaatctg-aaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||    
T  8147434 aaagaaaaatttgggcaatctgaaaaattctcacacgcaaatagatctcggaattttatttaacacactattgacgggttcatc 8147517  T

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Target: chr2; HSP #2
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 198 - 380
Target Start/End: Original strand, 45418566 - 45418748
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||| ||||||||||||||||||    
T  45418566 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacacttacaa 45418665  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  45418666 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatc 45418748  T

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Target: chr2; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 198 - 380
Target Start/End: Complemental strand, 44084787 - 44084605
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||  |||||||  ||||||||||||||||    
T  44084787 gggcggtttcaccgcccggcgaccccgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaatccaaaagttcattaacacacttacaa 44084688  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  44084687 aaagaaaaatttgggcaatctgaaaattctcatacgcaaataggtctcagaattttatttagcacactattgacgggttcatc 44084605  T

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Target: chr2; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 198 - 380
Target Start/End: Original strand, 770977 - 771164
Alignment:
Q  198 gggcggtttcaccgtccggcgacc-----ccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacact 292  Q
    |||||||||||||| |||||||||     ||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| | |||||||||||    
T  770977 gggcggtttcaccgcccggcgaccggatcccgggcggtcgcccgggctcgatcgataacttttgcacattagacccaaccaaaaagcccattaacacact 771076  T
Q  293 tacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  771077 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaactttatttagcacattattgacgggttcatc 771164  T

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Target: chr2; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 233 - 380
Target Start/End: Complemental strand, 12756986 - 12756839
Alignment:
Q  233 cccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacac 332  Q
    |||||| |||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12756986 cccgggttcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacac 12756887  T
Q  333 gcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  12756886 gcaaataagtctcggaattttatttagcacactattgacgggttcatc 12756839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 194 - 379
Target Start/End: Original strand, 42439965 - 42440150
Alignment:
Q  194 acatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactt 293  Q
    ||||||||||||  |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| | ||||||||| ||    
T  42439965 acatgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactaaacccaaaagcccattaacacattt 42440064  T
Q  294 acaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcat 379  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||| | |||||||| ||||||||||||||||| |||||    
T  42440065 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttgcaattttatttagcacactattgacggattcat 42440150  T

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Target: chr2; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 218 - 380
Target Start/End: Complemental strand, 41251798 - 41251636
Alignment:
Q  218 gaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatc 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| | ||||||||| ||||||||||||||||||| ||||||    
T  41251798 gaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatc 41251699  T
Q  318 tgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||| ||||||| |||||||||| |||||||||| ||||||||||||||| | ||||||    
T  41251698 tgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatc 41251636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 198 - 379
Target Start/End: Complemental strand, 8059517 - 8059336
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||| ||| ||||||||| || |||||| ||||| |||||||||||||||||||||||  |||| |||||| ||||||||||||||||||    
T  8059517 gggcggtttcaccgcccgacgaccccggccgatcgcccaggctcaatcgataatttttgcacattagagtcaacccaaaagccaattaacacacttacaa 8059418  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcat 379  Q
    |||||||||||||  |||| ||||||||||||||| ||||| |||||||||||||||| |||||||| ||||||||||||||    
T  8059417 aaagaaaaatttggccaatttgaaaattctcacacacaaatcggtctcggaattttatttagcacacaattgacgggttcat 8059336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 195 - 379
Target Start/End: Original strand, 35962695 - 35962879
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    |||||||||||  |||||  ||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||| ||||||   ||||||||| |||    
T  35962695 catgggcggttctaccgtatggcgaccccaggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcttattaacacattta 35962794  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcat 379  Q
    ||||||||||| |||| |||||||||||||| |||||| ||||||||||| |||||||||| |||||||||||||||||||||||    
T  35962795 caaaaagaaaattttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 35962879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 195 - 380
Target Start/End: Complemental strand, 6403991 - 6403806
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    ||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||  ||||||||| |||    
T  6403991 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacattta 6403892  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
     ||||||||||||||| |||||||||||||| ||||||| |||||||||| |||||||||| | ||||||||||||| | ||||||    
T  6403891 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatc 6403806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 215 - 380
Target Start/End: Complemental strand, 31581789 - 31581624
Alignment:
Q  215 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 314  Q
    ||||||| ||||||||||||| ||||||| ||||| |||||||| ||||||| || | |||||| | ||||||||| ||||||||||||||||||| |||    
T  31581789 ggcgaccacgggcggtcgcccaggctcgagcgatactttttgcatattagactcatcccaaaagcccattaacacatttacaaaaagaaaaatttgggca 31581690  T
Q  315 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  31581689 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatc 31581624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 193 - 380
Target Start/End: Complemental strand, 17445228 - 17445043
Alignment:
Q  193 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacact 292  Q
    |||||||||||||  |||||  ||||||| |||||||||||||| ||||||||||||||||||||||  ||||| |||| |||||| | ||||||||| |    
T  17445228 aacatgggcggttctaccgtgtggcgacctcgggcggtcgcccgagctcgatcgataatttttgcac--tagactcaacccaaaagcccattaacacatt 17445131  T
Q  293 tacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||||||||||||| |||||||||||||| ||||||| |||||||||| |||||||||| ||||||||||||||| | ||||||    
T  17445130 tacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatc 17445043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 195 - 379
Target Start/End: Original strand, 18981597 - 18981780
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    |||||||||||  |||||  |||||||| ||||||||| ||||||||||| ||||||||||||||||||||| |||| |||||||| ||||| ||| |||    
T  18981597 catgggcggttctaccgtatggcgaccc-gggcggtcgtccgggctcgattgataatttttgcacattagactcaacccaaaagtccattaaaacattta 18981695  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcat 379  Q
    |||||||||||||||| ||||| | |||||| |||||||||||||||||| |||||||||| ||||||||| |||||||||||||    
T  18981696 caaaaagaaaaatttgggcaatttaaaaattgtcacacgcaaataggtcttggaattttatttagcacactgttgacgggttcat 18981780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 195 - 379
Target Start/End: Complemental strand, 32127328 - 32127144
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    |||||||||||  | |||  ||||||||||||||||||||||||||||||| ||||||||||||||||| || | || ||||||   ||||||||| |||    
T  32127328 catgggcggttctagcgtatggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattaaactcgacccaaaagctcattaacacattta 32127229  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcat 379  Q
    |||||||||||||||  |||||||||||||| |||||||||||||| ||| |||||||||| |||||||||||||||||||||||    
T  32127228 caaaaagaaaaatttaggcaatctgaaaattgtcacacgcaaatagatcttggaattttatttagcacactattgacgggttcat 32127144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 218 - 379
Target Start/End: Original strand, 16405603 - 16405764
Alignment:
Q  218 gaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatc 317  Q
    ||||| |||||||||||||||||| ||||||||||||||||| |||||| |||| ||||||   ||||||||| ||| |||||||||||||||  |||||    
T  16405603 gaccctgggcggtcgcccgggctcaatcgataatttttgcacgttagactcaacccaaaagctcattaacacatttataaaaagaaaaatttggacaatc 16405702  T
Q  318 tgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcat 379  Q
    |||||||| ||||||||||||| |||| |||||||||| |||||||||||||||||||||||    
T  16405703 tgaaaattgtcacacgcaaataagtcttggaattttatttagcacactattgacgggttcat 16405764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 193 - 352
Target Start/End: Complemental strand, 2958289 - 2958131
Alignment:
Q  193 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacact 292  Q
    |||||||||||||  |||||  |||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||| |||||| | ||||||||| |    
T  2958289 aacatgggcggttctaccgtatggcgaccccgggcggtcgtccgggctcgatcgataatttt-gcacattagactcaacccaaaagcccattaacacatt 2958191  T
Q  293 tacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattt 352  Q
    |||||| ||||||||||| | |||||||||||| |||||||||||||||||| |||||||    
T  2958190 tacaaagagaaaaatttgggtaatctgaaaattgtcacacgcaaataggtcttggaattt 2958131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 240 - 379
Target Start/End: Original strand, 2285887 - 2286026
Alignment:
Q  240 tcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaata 339  Q
    |||||||||||||||||||||||| | |||||  ||||||| ||||||||| |||| ||| ||||||||||||||||||||||||| |||||||||||||    
T  2285887 tcgatcgataatttttgcacattaaatccaaccaaaaagtctattaacacatttacgaaaggaaaaatttgagcaatctgaaaattgtcacacgcaaata 2285986  T
Q  340 ggtctcggaattttatatagcacactattgacgggttcat 379  Q
    ||| | |||||||||| |||||||||||||||| ||||||    
T  2285987 ggttttggaattttatttagcacactattgacgtgttcat 2286026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 213 - 329
Target Start/End: Original strand, 26237955 - 26238071
Alignment:
Q  213 ccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgag 312  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||  |||  |||||||| ||||||||||||||||||||||||||||| |    
T  26237955 ccggcgaccccgggcggtcgcccgggctcgatcgat-atttttgcaaattagatgcaaaccaaaagtccattaacacacttacaaaaagaaaaatttggg 26238053  T
Q  313 c-aatctgaaaattctca 329  Q
    | |||||||||| |||||    
T  26238054 caaatctgaaaactctca 26238071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 234 - 380
Target Start/End: Complemental strand, 26162847 - 26162704
Alignment:
Q  234 ccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacg 333  Q
    ||||||||  |||||||||||| ||||||| |  |||| |||||  | ||||||||||||||||||||||||||||| ||||||| |||||||||| ||     
T  26162847 ccgggctccttcgataatttttacacattaaattcaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcaaaca 26162748  T
Q  334 caaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||||||||||   |||| ||||||| ||||||||||||||||    
T  26162747 caaataggtctcgga---ttatttagcacattattgacgggttcatc 26162704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 202 - 341
Target Start/End: Complemental strand, 4555390 - 4555250
Alignment:
Q  202 ggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaag 301  Q
    |||| ||||| ||||||| | |||||||||||  || ||||||||||||||||||||||| | ||||||| ||||||    |||||||||||||||||||    
T  4555390 ggttccaccgcccggcgatctcgggcggtcgct-ggactcgatcgataatttttgcacatcaaacccaacccaaaagctcgttaacacacttacaaaaag 4555292  T
Q  302 aaaaatttgagc--aatctgaaaattctcacacgcaaatagg 341  Q
    |||| |||| ||  |||||||||||||||||||| |||||||    
T  4555291 aaaattttgggcaaaatctgaaaattctcacacgtaaatagg 4555250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 224 - 341
Target Start/End: Complemental strand, 7072710 - 7072589
Alignment:
Q  224 gggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaatta--acacacttacaaaaagaaaaatttgagcaa--tctg 319  Q
    ||||||||||||||||||||||||||||||||  |||||| || |||| |||||| | ||||  ||||||||| ||||||||||  |||  |||  ||||    
T  7072710 gggcggtcgcccgggctcgatcgataatttttttacattaaactcaacccaaaagcccattaacacacacttataaaaagaaaatattggacaaattctg 7072611  T
Q  320 aaaattctcacacgcaaatagg 341  Q
    ||||||||| |||| |||||||    
T  7072610 aaaattctcgcacgtaaatagg 7072589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 34523223 - 34523296
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaac 271  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||  ||||||   |||||||| ||||||    
T  34523223 gggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgatccgtaatttcctcacattaggcccaac 34523296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 34905969 - 34906028
Alignment:
Q  235 cgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    |||||||||||||||||||||||||||||  || ||| |||||| | |||||||||||||    
T  34905969 cgggctcgatcgataatttttgcacattaagcctaacccaaaagcccattaacacactta 34906028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 150; Significance: 3e-79; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 195 - 380
Target Start/End: Complemental strand, 34389243 - 34389058
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||    
T  34389243 catgggcgatttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacactta 34389144  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  34389143 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattatcgacgggttcatc 34389058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 198 - 380
Target Start/End: Complemental strand, 37002328 - 37002146
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||| ||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  37002328 gggcggtttcaccgcccggcgaccccgggcggtcgttcggtctcgatcgataatttttgcacattagacccaatccaaaagtcaattaacacacttacaa 37002229  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  37002228 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatc 37002146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 198 - 380
Target Start/End: Original strand, 26624728 - 26624911
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat-cgataatttttgcacattagacccaactcaaaagtcaattaacacacttaca 296  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||| |||||||||||||| |||||||||||  ||||||| ||||||||||||||||    
T  26624728 gggcggtttcaccgcccggcaaccccgggcggtcgcctgggctcgattcgataatttttgcatattagacccaatccaaaagttaattaacacacttaca 26624827  T
Q  297 aaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26624828 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatc 26624911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 198 - 380
Target Start/End: Complemental strand, 8867915 - 8867733
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||| ||||||| ||| ||||||    
T  8867915 gggcagtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcatattagacccaatccaaaagccaattaatacatttacaa 8867816  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  8867815 aaagaaaaatttgggcaatcggaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatc 8867733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 224 - 380
Target Start/End: Original strand, 35090177 - 35090333
Alignment:
Q  224 gggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaa 323  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| | ||||||||||    
T  35090177 gggcggtcgcccgggctcgatcaataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggtaatctgaaaa 35090276  T
Q  324 ttctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  35090277 ttctcacacgcaaataggtctcggaattttatttagcacactattgacggattcatc 35090333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 195 - 379
Target Start/End: Original strand, 5555467 - 5555651
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    |||||||||||  |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| | |||||| || |||    
T  5555467 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacgcattta 5555566  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcat 379  Q
    |||||||||||||||| |||||||||||||| |||||| ||||||||||| |||||||||| |||||||||||||||||||||||    
T  5555567 caaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 5555651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 192 - 380
Target Start/End: Complemental strand, 43184658 - 43184470
Alignment:
Q  192 gaacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacac 291  Q
    ||||| |||||||||||||| |||||||  |||||||||||| ||||||||||||||||||||| | ||| ||||  ||| |||||| ||||||||| ||    
T  43184658 gaacaggggcggtttcaccgcccggcgattccgggcggtcgctcgggctcgatcgataatttttacgcatcagacttaacccaaaagccaattaacatac 43184559  T
Q  292 ttacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  43184558 ttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatc 43184470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 198 - 376
Target Start/End: Original strand, 33685547 - 33685725
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||||||||||| ||||||| |||||| | ||||||||||||||||    
T  33685547 gggcggtttcaccgcccggcgaccccaggcagtcgctcgggctcgatcgataatttttgcacattaaacccaacccaaaagcccattaacacacttacaa 33685646  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggtt 376  Q
    ||||||||||||| |||||||||||||||||| ||||||||| |||||  |||||||| ||||||||||||||||||||    
T  33685647 aaagaaaaatttgggcaatctgaaaattctcatacgcaaatatgtctcataattttatttagcacactattgacgggtt 33685725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 238 - 380
Target Start/End: Complemental strand, 38638380 - 38638238
Alignment:
Q  238 gctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaa 337  Q
    ||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  38638380 gctcgattgataatttttgcacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaa 38638281  T
Q  338 taggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  38638280 taggtctcggaattttatttagcacactattgacgggttcatc 38638238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 195 - 379
Target Start/End: Complemental strand, 3114283 - 3114099
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    |||||||||||  |||||  || |||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||| | ||||||||| |||    
T  3114283 catgggcggttctaccgtatggtgaccccggacggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 3114184  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcat 379  Q
    |||||||||||||||| |||||||||||||| |||||| ||||||||||| |||||||||| |||||||||||||||||||||||    
T  3114183 caaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 3114099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 198 - 380
Target Start/End: Original strand, 7002708 - 7002890
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||  ||||||  |||||| ||||||| |||||| |||||||||||| |||||    
T  7002708 gggcggtttcaccgcccggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaa 7002807  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||| |||||||||  |||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  7002808 aaataaaaatttggacaatctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatc 7002890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 198 - 380
Target Start/End: Original strand, 7048579 - 7048761
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||  ||||||  |||||| ||||||| |||||| |||||||||||| |||||    
T  7048579 gggcggtttcaccgcccggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaa 7048678  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||| |||||||||  |||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  7048679 aaataaaaatttggacaatctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatc 7048761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 215 - 380
Target Start/End: Original strand, 36630816 - 36630981
Alignment:
Q  215 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 314  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||  ||||||| ||||||||| ||||||||||||||||||| |||    
T  36630816 ggcgaccccggacggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggca 36630915  T
Q  315 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||| |||||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  36630916 atctgaaaattgtcacacgcaaataggtcttggaattttagttagcacactattgacgggttcatc 36630981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 215 - 376
Target Start/End: Original strand, 8394125 - 8394286
Alignment:
Q  215 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||  ||||||| ||||||||| |||||||| |||||||||| |||    
T  8394125 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaggaaaaatttgggca 8394224  T
Q  315 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggtt 376  Q
    ||||||||||| ||||||| |||||||||| |||||||||| ||||||||||||||||||||    
T  8394225 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacgggtt 8394286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 194 - 380
Target Start/End: Complemental strand, 14777295 - 14777109
Alignment:
Q  194 acatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactt 293  Q
    ||||||||||||  |||||   |||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||   ||||||||| ||    
T  14777295 acatgggcggttctaccgtgtagcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagctcattaacacattt 14777196  T
Q  294 acaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||||||| |||||||||||||| ||||||| |||||||||| |||||||||| ||||||||||||||| | ||||||    
T  14777195 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatc 14777109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 233 - 380
Target Start/End: Original strand, 36658199 - 36658346
Alignment:
Q  233 cccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacac 332  Q
    ||||| |||||||||||||||||||||||| ||||||||  ||||| ||||||||| ||| ||||||| ||||||||| |||||||||||||||||||||    
T  36658199 cccggactcgatcgataatttttgcacattggacccaaccgaaaagccaattaacatactaacaaaaataaaaatttgggcaatctgaaaattctcacac 36658298  T
Q  333 gcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36658299 gcaaataggtctcggaattttatttagcacactattgacgggttcatc 36658346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 234 - 380
Target Start/End: Complemental strand, 40920151 - 40920005
Alignment:
Q  234 ccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacg 333  Q
    ||||||||||||||||||||||||||||||||   ||| |||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||| |    
T  40920151 ccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatg 40920052  T
Q  334 caaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  40920051 caaataggtctcggaattttatttagcacactattgacgggttcatc 40920005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 341
Target Start/End: Complemental strand, 10868575 - 10868514
Alignment:
Q  282 attaacacacttacaaaaagaaaaatttgagc--aatctgaaaattctcacacgcaaatagg 341  Q
    ||||||||| ||||||||||||||||||| ||  ||||||||||||||||| ||||||||||    
T  10868575 attaacacatttacaaaaagaaaaatttgggcaaaatctgaaaattctcacgcgcaaatagg 10868514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 10876876 - 10876829
Alignment:
Q  213 ccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcaca 260  Q
    ||||||| |||| | |||||||||||||||||||||||||||||||||    
T  10876876 ccggcgaacccgtgtggtcgcccgggctcgatcgataatttttgcaca 10876829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 305
Target Start/End: Original strand, 26502797 - 26502899
Alignment:
Q  202 ggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaag 301  Q
    |||| ||||||  ||||||||| ||| |||||||||||||||||||   |||||||| ||||  |||||| |||||| | |||||||||| ||||||||     
T  26502797 ggttccaccgtgtggcgaccccaggcagtcgcccgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacacac-tacaaaaaa 26502895  T
Q  302 aaaa 305  Q
    ||||    
T  26502896 aaaa 26502899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 305
Target Start/End: Complemental strand, 26589917 - 26589815
Alignment:
Q  202 ggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaag 301  Q
    |||| ||||||  ||||||||| ||| |||||||||||||||||||   |||||||| ||||  |||||| |||||| | |||||||||| ||||||||     
T  26589917 ggttccaccgtgtggcgaccccaggcagtcgcccgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacacac-tacaaaaaa 26589819  T
Q  302 aaaa 305  Q
    ||||    
T  26589818 aaaa 26589815  T

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Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 37966666 - 37966614
Alignment:
Q  199 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataat 251  Q
    ||||||||||||| ||||||||| | |||||||| ||| ||||||||||||||    
T  37966666 ggcggtttcaccgcccggcgacctcaggcggtcgtccgagctcgatcgataat 37966614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 146; Significance: 8e-77; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 195 - 380
Target Start/End: Complemental strand, 34137012 - 34136827
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  34137012 catgggtggtttcaccgtctggcgaccccgagcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagtcaattaacacactta 34136913  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||| |||||||||    
T  34136912 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcgaaattttatttagcacacaattgatgggttcatc 34136827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 198 - 380
Target Start/End: Original strand, 23402091 - 23402273
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||| ||||||||||||||||||    
T  23402091 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacacacttacaa 23402190  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||| ||||||||    
T  23402191 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcgaaattttatttaacacactattgactggttcatc 23402273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 195 - 380
Target Start/End: Original strand, 4403988 - 4404173
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    ||||| ||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||| |||||    
T  4403988 catggacggtttcactggccggcgaccccaggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacatactta 4404087  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||    
T  4404088 caaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatc 4404173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 213 - 380
Target Start/End: Complemental strand, 16788194 - 16788027
Alignment:
Q  213 ccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgag 312  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||| |    
T  16788194 ccggcaaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttggg 16788095  T
Q  313 caatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||| |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  16788094 caatcttaaaactctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatc 16788027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 202 - 380
Target Start/End: Original strand, 36408538 - 36408716
Alignment:
Q  202 ggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaag 301  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||| ||||||||||    
T  36408538 ggtttcaccgcccggcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagatccaacccaaaagtccattaacacatttacaaaaag 36408637  T
Q  302 aaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||| |||  ||||| |||||||||| |||||| |||||||||| ||||||||| || |||||||||| ||| ||||||    
T  36408638 aaaatttttggcaatttgaaaattcttacacgctaataggtctcagaattttatttaacacactattgccggattcatc 36408716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 215 - 379
Target Start/End: Original strand, 15838286 - 15838449
Alignment:
Q  215 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 314  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||| || ||||  ||||||| ||||||||| |||||||| |||||||||| |||    
T  15838286 ggcgaccccgggcggtcacccgggctcgattgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaa-gaaaaatttgggca 15838384  T
Q  315 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcat 379  Q
    ||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  15838385 atctgaaaattttcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 15838449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 198 - 380
Target Start/End: Complemental strand, 29728570 - 29728388
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    ||||||||  |||||  ||||||||||| |||||||||| ||||||||||||| ||||||||||||||| |||| ||||||   ||||||||| ||||||    
T  29728570 gggcggttctaccgtatggcgaccccggacggtcgcccgtgctcgatcgataaattttgcacattagactcaacccaaaagctcattaacacatttacaa 29728471  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||| |||||||||||||| | ||||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  29728470 aaagaaaaatttgggcaatctgaaaattgtgacacgcaaataggtcttcgaattttatttagcacactattgacgggttcatc 29728388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 237 - 369
Target Start/End: Original strand, 9877242 - 9877374
Alignment:
Q  237 ggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaa 336  Q
    |||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  9877242 ggctcgattgataatttttgcacattagacctaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacatgcaa 9877341  T
Q  337 ataggtctcggaattttatatagcacactattg 369  Q
    |||||||||| |||||||| |||||||||||||    
T  9877342 ataggtctcgaaattttatttagcacactattg 9877374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 229 - 380
Target Start/End: Complemental strand, 3648947 - 3648796
Alignment:
Q  229 gtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctc 328  Q
    ||||||||||||||||||||||||||| |||||||||| |||| |||||| | ||||||||| |||||||||||||| |||| |||||||||||||| ||    
T  3648947 gtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaattttgggcaatctgaaaattgtc 3648848  T
Q  329 acacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||| ||||| | |||||||||| ||||||||||||||||||||||||    
T  3648847 acacgcaagtaggttttggaattttatttagcacactattgacgggttcatc 3648796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 198 - 380
Target Start/End: Complemental strand, 2729380 - 2729198
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||| | ||||  |||||| | ||||||||||||| ||    
T  2729380 gggcggtttcaccgcccggcgaccccgggcggacgcccgggctcgatcgataatttttacacattaaatccaatccaaaagcccattaacacacttataa 2729281  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||  |||  ||||| |||||| ||||| |||||||||||||||  |||||||| |||||||||||||| || ||||||    
T  2729280 aaagaaattttttggcaatttgaaaactctcatacgcaaataggtctcaaaattttatttagcacactattgatggattcatc 2729198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 195 - 380
Target Start/End: Original strand, 39914495 - 39914679
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    ||||| ||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||   ||||||||| |||    
T  39914495 catggacggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 39914594  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
     ||||| ||||||||| ||||| |||||||| ||||| | |||||||||| |||||||||| | ||||||||||||| | ||||||    
T  39914595 taaaaa-aaaaatttgggcaatttgaaaattgtcacaagtaaataggtcttggaattttatttggcacactattgacagtttcatc 39914679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 247 - 380
Target Start/End: Original strand, 42230971 - 42231102
Alignment:
Q  247 ataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcg 346  Q
    ||||||||||||||||| | |||||||||||||| ||||||||  ||||||||||||||||||| ||||| |||||||||||| | |||||||||||||     
T  42230971 ataatttttgcacattaaatccaactcaaaagtccattaacac--ttacaaaaagaaaaatttgggcaatttgaaaattctcatatgcaaataggtctca 42231068  T
Q  347 gaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||| ||||||||||||||||| ||||||    
T  42231069 gaattttatttagcacactattgacggattcatc 42231102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 231 - 341
Target Start/End: Original strand, 3435285 - 3435397
Alignment:
Q  231 cgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc--aatctgaaaattctc 328  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||  | ||||||||||||||||||||||||||||| ||  |||||||||||||||    
T  3435285 cgcccgggcttgatcgataatttttgcacattagacccaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaaaatctgaaaattctc 3435384  T
Q  329 acacgcaaatagg 341  Q
    | |||||||||||    
T  3435385 aaacgcaaatagg 3435397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 238 - 308
Target Start/End: Complemental strand, 40470637 - 40470567
Alignment:
Q  238 gctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatt 308  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||| |||||||    
T  40470637 gctcgatcgataatttttgcacattagacccaaatcaaaagtccattaacacacttataaaaaaaaaaatt 40470567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 300
Target Start/End: Complemental strand, 10397220 - 10397122
Alignment:
Q  202 ggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaa 300  Q
    |||| ||||| |||||||| ||||||  |||||||||||| ||||||||||| | ||||||||   |||| |||||| | ||||||||| ||| |||||    
T  10397220 ggttacaccgcccggcgactccgggcactcgcccgggctcaatcgataatttcttcacattaggttcaacccaaaagccgattaacacagttaaaaaaa 10397122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 349
Target Start/End: Original strand, 376459 - 376519
Alignment:
Q  290 acttacaaaaagaaaaatt-tgagcaatctgaaaattctcacacgcaaataggtctcggaa 349  Q
    ||||| ||||| ||||||| || | ||| |||||||||||||||||||| |||||||||||    
T  376459 acttaaaaaaaaaaaaattgtgcgaaatatgaaaattctcacacgcaaagaggtctcggaa 376519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 134; Significance: 1e-69; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 195 - 380
Target Start/End: Original strand, 35907532 - 35907717
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||  |||||||    
T  35907532 catgggcggtttcaccgcccggcgacctcgggcggtcgcccgggcttgatcgataatttttgcacattagacccaacccaaaagccaattagtacactta 35907631  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  35907632 caaaaagaaaattttgggtaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgagttcatc 35907717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 198 - 380
Target Start/End: Original strand, 17445296 - 17445478
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||  | |||||||||||  ||||||||||||||| |||| |||||||||| |||||||| ||||| |||||||||||||||||||||||||    
T  17445296 gggcggtttcattgcccggcgaccccatgcggtcgcccgggctggatcaataatttttgtacattagatccaacccaaaagtcaattaacacacttacaa 17445395  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  17445396 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatc 17445478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 198 - 380
Target Start/End: Original strand, 3828967 - 3829148
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    ||||||||||| |  ||||| ||||||| ||||||| |||| |||||||||||||||||||||||| ||||||| |||||||  ||||||||||||||||    
T  3828967 gggcggtttcatcacccggcaaccccggacggtcgctcgggttcgatcgataatttttgcacattaaacccaacccaaaagttcattaacacacttacaa 3829066  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||| |||||||||||||| ||| |||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  3829067 aaagaaaaatttgggcaatctgaaaattttcatacgcaaataggtct-ggaattttatttagcacactattgacgggttcatc 3829148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 198 - 380
Target Start/End: Complemental strand, 321561 - 321379
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||  |||||||   |||||||||| |||||||||||||||||||||||  ||||||| ||||| |||||||| ||||||||| ||||||    
T  321561 gggcggtttcaccacccggcgatttcgggcggtcgtccgggctcgatcgataatttttgtgcattagatccaacccaaaagtccattaacacagttacaa 321462  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||| || |||| ||||||||||||||||    
T  321461 aaagaaaaatttgggcaatctgaaaattctcatatgcaaataggtctcggaattttatttaacacattattgacgggttcatc 321379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 194 - 379
Target Start/End: Original strand, 7433424 - 7433609
Alignment:
Q  194 acatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactt 293  Q
    ||||||||||||  |||||  ||| |||||||||||||||||| |||||||| |||||||||||||||||||| |||| |||||| | ||||||||| ||    
T  7433424 acatgggcggttctaccgtatggcaaccccgggcggtcgcccgagctcgatctataatttttgcacattagactcaacccaaaagcccattaacacattt 7433523  T
Q  294 acaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcat 379  Q
    |||||||||||| |||| ||||||| |||||| |||||| ||||||||||| | |||||||| |||||||||||||||||||||||    
T  7433524 acaaaaagaaaattttgggcaatctaaaaattgtcacacacaaataggtcttgaaattttatttagcacactattgacgggttcat 7433609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 195 - 380
Target Start/End: Original strand, 26144235 - 26144420
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    ||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||   ||||||||| |||    
T  26144235 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 26144334  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
     ||||||||||||||| ||||| |||||||| ||||||| |||||||||| |||||||||| | ||||||||||||| | ||||||    
T  26144335 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatc 26144420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 198 - 380
Target Start/End: Complemental strand, 42311125 - 42310943
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    ||||||||  |||||  ||||||||| | || ||||||||||||||||||||||||||||||||||||| |||| |||||| |  |||||||| ||||||    
T  42311125 gggcggttctaccgtatggcgaccccagacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccgttaacacatttacaa 42311026  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||| |||||||||||||| ||||||||||||| |||| | |||||||| ||| || |||||||||||||||||    
T  42311025 aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataagtcttgaaattttatttagtacgctattgacgggttcatc 42310943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 215 - 380
Target Start/End: Complemental strand, 32982223 - 32982058
Alignment:
Q  215 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 314  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||  ||||| | ||||||| | |||||||||||||||||||  ||    
T  32982223 ggcgaccccgggcggtcgcgcgggcccgatcgataatttttgcacattagacccaacctaaaagcccattaacatatttacaaaaagaaaaatttggaca 32982124  T
Q  315 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||| |||||| ||||||||||| |||||||||| |||||| |||||||| | ||||||    
T  32982123 atctgaaaattgtcacacacaaataggtcttggaattttatttagcactctattgacagattcatc 32982058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 198 - 341
Target Start/End: Complemental strand, 41972458 - 41972314
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||| |||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||| |||||  ||||| | ||||||||||||||||    
T  41972458 gggcggttccaccgtccagcgaccccgggcggtcgcctgg-ctcgatcgataatttttgcacattagatccaacctaaaagcctattaacacacttacaa 41972360  T
Q  298 aaagaaaaatttg--agcaatctgaaaattctcacacgcaaatagg 341  Q
    |||||||||||||  |  ||||||||||||||||||||||||||||    
T  41972359 aaagaaaaatttggaaaaaatctgaaaattctcacacgcaaatagg 41972314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 198 - 341
Target Start/End: Original strand, 33489670 - 33489815
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    |||||||||||||  ||||||||||||| ||||||  |||| | | ||||||||||||| ||||||||| |||   ||||| | |||||||||||||| |    
T  33489670 gggcggtttcaccacccggcgaccccggacggtcgttcgggattgttcgataatttttgtacattagactcaaactaaaagcccattaacacacttacta 33489769  T
Q  298 aaagaaaaatttgagc--aatctgaaaattctcacacgcaaatagg 341  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||    
T  33489770 aaagaaaaatttgagcaaaatctgaaaattctcacacgcaaatagg 33489815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 194 - 321
Target Start/End: Original strand, 23313217 - 23313345
Alignment:
Q  194 acatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataattt-ttgcacattagacccaactcaaaagtcaattaacacact 292  Q
    ||||||||||||  |||||  ||||| | |||||||| ||||||||||||| ||| |||| ||||||||||||| ||||  ||||||  ||||||||| |    
T  23313217 acatgggcggttctaccgtatggcgatctcgggcggttgcccgggctcgattgatgatttgttgcacattagactcaacataaaagttcattaacacatt 23313316  T
Q  293 tacaaaaagaaaaatttgagcaatctgaa 321  Q
    |||||||||||||||||| ||||||||||    
T  23313317 tacaaaaagaaaaatttgggcaatctgaa 23313345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 193 - 251
Target Start/End: Complemental strand, 44352672 - 44352614
Alignment:
Q  193 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataat 251  Q
    |||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  44352672 aacaggggcggtttcaccatccggcgaccccgggaggtcgcccgggctcgatcgataat 44352614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 252
Target Start/End: Original strand, 31866960 - 31867014
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatt 252  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| ||||||||    
T  31866960 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggttcgaccgataatt 31867014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 198 - 278
Target Start/End: Complemental strand, 48901288 - 48901209
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaag 278  Q
    |||||||| ||||| ||||| || ||||||||| ||| ||| |||||||||||||| |||||||||| |||||| ||||||    
T  48901288 gggcggttccaccgcccggcaactccgggcggtggccgggg-tcgatcgataatttatgcacattaggcccaacccaaaag 48901209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 35951493 - 35951427
Alignment:
Q  234 ccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaa 300  Q
    ||||||||||||||||||||||| |||||||  | ||| ||| || | ||||||||||| |||||||    
T  35951493 ccgggctcgatcgataatttttgtacattaggtcgaacccaatagcccattaacacactaacaaaaa 35951427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 348 - 380
Target Start/End: Original strand, 33489839 - 33489871
Alignment:
Q  348 aattttatatagcacactattgacgggttcatc 380  Q
    |||||||| ||||||||||||||||||||||||    
T  33489839 aattttatttagcacactattgacgggttcatc 33489871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 348 - 380
Target Start/End: Complemental strand, 41972290 - 41972258
Alignment:
Q  348 aattttatatagcacactattgacgggttcatc 380  Q
    |||||||| ||||||||||||||||||||||||    
T  41972290 aattttatttagcacactattgacgggttcatc 41972258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 215 - 380
Target Start/End: Original strand, 5230 - 5395
Alignment:
Q  215 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 314  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||   ||||| |||||||||||||||||||||||||| |||| |||    
T  5230 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 5329  T
Q  315 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5330 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatc 5395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 119; Significance: 1e-60; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 198 - 380
Target Start/End: Original strand, 31463 - 31645
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaa 297  Q
    ||||||||||| || ||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||| |||||| | ||||||||||||||||    
T  31463 gggcggtttcatcgcccggcgaccccagacggtcgcccgggctcgatcgataatttttgcacactagacccaacccaaaagcccattaacacacttacaa 31562  T
Q  298 aaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||||||||  |||||||||||||||||| ||||||||||||| | |||||||| | ||||||||||||| ||||||||    
T  31563 aaagaaaaatttggacaatctgaaaattctcactcgcaaataggtctagtaattttattttgcacactattgacaggttcatc 31645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 234 - 380
Target Start/End: Original strand, 52944 - 53090
Alignment:
Q  234 ccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacg 333  Q
    ||||||||||||||||||||||||||||||||   ||| |||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||| |    
T  52944 ccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatg 53043  T
Q  334 caaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  53044 caaataggtctcggaattttatttagcacactattgacgggttcatc 53090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 195 - 380
Target Start/End: Original strand, 17822 - 18007
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    |||||||||||  |||||  |||||||||| ||| ||| ||||||||||||||||||||||||||||||||| |||| |||||| | ||||||||| |||    
T  17822 catgggcggttctaccgtgtggcgaccccgagcgatcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 17921  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
    |||||||||||||||| |||||||||||||| ||||| | |||||||||| | |||||||| ||||||||||||||| | ||||||    
T  17922 caaaaagaaaaatttgggcaatctgaaaattgtcacatgtaaataggtcttgaaattttatttagcacactattgacagtttcatc 18007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 195 - 380
Target Start/End: Complemental strand, 480644 - 480459
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    ||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||   ||||||||| |||    
T  480644 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 480545  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
     ||||||||||||||| ||||| |||||||| ||||||| |||||||||| |||||||||| | ||||||||||||| | ||||||    
T  480544 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatc 480459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2142 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 195 - 380
Target Start/End: Original strand, 502 - 687
Alignment:
Q  195 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 294  Q
    ||||||||||| ||||||   |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||   ||||||||| |||    
T  502 catgggcggttccaccgtgtagcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 601  T
Q  295 caaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgggttcatc 380  Q
     ||||||||||||||| ||||| |||||||| ||||||| |||||||||| |||||||||| | ||||||||||||| | ||||||    
T  602 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatc 687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 1260 - 1333
Alignment:
Q  198 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaac 271  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||  ||||||   |||||||| ||||||    
T  1260 gggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgatccgtaatttcctcacattaggcccaac 1333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 271
Target Start/End: Original strand, 194021 - 194084
Alignment:
Q  208 accgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaac 271  Q
    |||| |||||||||||||||||||||||||||||||||  ||||||   |||||||| ||||||    
T  194021 accgcccggcgaccccgggcggtcgcccgggctcgatccgtaatttcctcacattaggcccaac 194084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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