View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2818_low_15 (Length: 222)

Name: NF2818_low_15
Description: NF2818
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2818_low_15
NF2818_low_15
[»] chr3 (32 HSPs)
chr3 (1-182)||(19646824-19647005)
chr3 (181-222)||(2239225-2239267)
chr3 (181-222)||(28097415-28097457)
chr3 (181-222)||(1589066-1589107)
chr3 (183-222)||(787099-787139)
chr3 (176-222)||(25126271-25126318)
chr3 (181-222)||(2118711-2118753)
chr3 (181-222)||(9153475-9153517)
chr3 (181-222)||(30761073-30761115)
chr3 (181-222)||(32205120-32205162)
chr3 (181-222)||(33576682-33576724)
chr3 (177-222)||(36567148-36567194)
chr3 (181-222)||(41223511-41223553)
chr3 (181-222)||(53531804-53531846)
chr3 (182-222)||(19914475-19914516)
chr3 (178-222)||(21841984-21842029)
chr3 (182-222)||(31117619-31117660)
chr3 (182-222)||(38511930-38511971)
chr3 (182-222)||(47943733-47943774)
chr3 (183-222)||(2118987-2119027)
chr3 (183-222)||(17483561-17483601)
chr3 (183-222)||(17483831-17483871)
chr3 (133-172)||(19653742-19653782)
chr3 (183-222)||(41282120-41282160)
chr3 (183-222)||(41722257-41722297)
chr3 (182-221)||(44624500-44624540)
chr3 (183-222)||(45760506-45760546)
chr3 (186-222)||(47922363-47922399)
chr3 (182-222)||(51187961-51188001)
chr3 (183-222)||(51213307-51213347)
chr3 (182-217)||(51860333-51860369)
chr3 (183-222)||(53191236-53191276)
[»] chr2 (29 HSPs)
chr2 (58-129)||(18762603-18762674)
chr2 (58-129)||(18773393-18773464)
chr2 (1-54)||(18773232-18773285)
chr2 (181-222)||(19025822-19025864)
chr2 (182-222)||(37334604-37334644)
chr2 (181-222)||(1467081-1467123)
chr2 (181-222)||(24205292-24205334)
chr2 (181-222)||(31784250-31784292)
chr2 (184-222)||(34981386-34981424)
chr2 (181-222)||(40493918-40493960)
chr2 (181-222)||(40711334-40711376)
chr2 (181-222)||(40938792-40938834)
chr2 (186-222)||(16238496-16238533)
chr2 (185-222)||(19885861-19885898)
chr2 (182-222)||(20436057-20436098)
chr2 (182-222)||(21024734-21024775)
chr2 (182-222)||(22194447-22194488)
chr2 (182-222)||(24895184-24895225)
chr2 (182-222)||(31784524-31784565)
chr2 (182-222)||(33004708-33004749)
chr2 (186-222)||(34981655-34981692)
chr2 (185-222)||(35173087-35173124)
chr2 (182-222)||(41072101-41072142)
chr2 (181-213)||(2638818-2638850)
chr2 (177-213)||(18296717-18296753)
chr2 (183-222)||(21552541-21552581)
chr2 (183-222)||(22194721-22194761)
chr2 (183-222)||(38731279-38731319)
chr2 (183-222)||(39642729-39642769)
[»] chr8 (41 HSPs)
chr8 (181-222)||(36624184-36624225)
chr8 (182-222)||(29197298-29197338)
chr8 (182-222)||(38701933-38701973)
chr8 (181-222)||(5734182-5734224)
chr8 (181-222)||(7150840-7150882)
chr8 (182-222)||(4146784-4146825)
chr8 (182-222)||(37205539-37205580)
chr8 (181-222)||(2321514-2321556)
chr8 (181-222)||(6745267-6745309)
chr8 (181-222)||(8870534-8870576)
chr8 (181-222)||(17943356-17943398)
chr8 (181-222)||(18530830-18530872)
chr8 (181-222)||(23234053-23234095)
chr8 (181-222)||(37639505-37639547)
chr8 (181-222)||(41206405-41206447)
chr8 (181-222)||(44807348-44807390)
chr8 (182-222)||(414928-414969)
chr8 (182-222)||(6014418-6014459)
chr8 (182-222)||(6335601-6335642)
chr8 (182-222)||(7658601-7658642)
chr8 (182-222)||(15187927-15187968)
chr8 (182-222)||(16531522-16531563)
chr8 (182-222)||(33687760-33687801)
chr8 (181-222)||(36623903-36623944)
chr8 (182-222)||(37953373-37953414)
chr8 (182-222)||(42267455-42267496)
chr8 (186-222)||(42930891-42930928)
chr8 (182-222)||(45106434-45106475)
chr8 (182-222)||(45516193-45516234)
chr8 (183-222)||(4107121-4107161)
chr8 (183-222)||(4167473-4167513)
chr8 (183-222)||(6641871-6641911)
chr8 (177-213)||(9823385-9823421)
chr8 (182-222)||(10285102-10285142)
chr8 (183-222)||(14024313-14024353)
chr8 (183-222)||(16531248-16531288)
chr8 (183-222)||(23233781-23233821)
chr8 (183-222)||(23623421-23623461)
chr8 (183-222)||(27339816-27339856)
chr8 (182-222)||(34608652-34608692)
chr8 (183-222)||(42866366-42866406)
[»] chr1 (43 HSPs)
chr1 (181-222)||(26932581-26932622)
chr1 (181-222)||(14738-14780)
chr1 (181-222)||(7598879-7598921)
chr1 (182-222)||(16490973-16491014)
chr1 (182-222)||(44846917-44846958)
chr1 (181-222)||(52201364-52201405)
chr1 (182-222)||(21697147-21697187)
chr1 (174-218)||(51195957-51196001)
chr1 (182-220)||(15015-15054)
chr1 (183-222)||(6912217-6912256)
chr1 (181-222)||(1712368-1712410)
chr1 (181-222)||(8770461-8770503)
chr1 (181-222)||(11018675-11018717)
chr1 (177-222)||(15911666-15911712)
chr1 (177-222)||(23342234-23342280)
chr1 (181-222)||(32341765-32341807)
chr1 (181-222)||(39427409-39427451)
chr1 (181-222)||(42406881-42406923)
chr1 (181-222)||(49227118-49227160)
chr1 (181-222)||(52143438-52143480)
chr1 (181-222)||(6606534-6606575)
chr1 (186-222)||(6809342-6809379)
chr1 (182-222)||(20471685-20471726)
chr1 (182-222)||(20559811-20559852)
chr1 (186-222)||(22071166-22071203)
chr1 (182-222)||(22204304-22204345)
chr1 (182-222)||(23341963-23342004)
chr1 (182-222)||(26811452-26811493)
chr1 (182-222)||(33811698-33811739)
chr1 (182-222)||(33871168-33871209)
chr1 (182-222)||(37028927-37028968)
chr1 (182-222)||(39427686-39427727)
chr1 (182-222)||(43914853-43914894)
chr1 (182-222)||(45884947-45884988)
chr1 (183-222)||(6183255-6183295)
chr1 (183-222)||(6491689-6491729)
chr1 (175-222)||(12690013-12690061)
chr1 (183-222)||(13791848-13791888)
chr1 (183-222)||(21932061-21932101)
chr1 (183-222)||(22075624-22075664)
chr1 (183-222)||(27855563-27855603)
chr1 (183-222)||(38622676-38622716)
chr1 (183-222)||(52149787-52149827)
[»] chr7 (35 HSPs)
chr7 (182-222)||(37858326-37858366)
chr7 (182-222)||(45863022-45863062)
chr7 (183-222)||(17802181-17802220)
chr7 (181-222)||(10350804-10350846)
chr7 (181-222)||(23740262-23740304)
chr7 (182-222)||(16879234-16879275)
chr7 (181-222)||(17167853-17167894)
chr7 (182-222)||(38882369-38882410)
chr7 (183-222)||(42997325-42997365)
chr7 (172-222)||(10318880-10318931)
chr7 (181-222)||(3925791-3925833)
chr7 (181-222)||(18852493-18852535)
chr7 (181-222)||(23909893-23909935)
chr7 (181-222)||(29163098-29163140)
chr7 (181-222)||(34533486-34533528)
chr7 (181-222)||(43408477-43408519)
chr7 (182-222)||(930981-931022)
chr7 (186-222)||(7195459-7195496)
chr7 (182-222)||(9629289-9629330)
chr7 (182-222)||(19778527-19778568)
chr7 (182-222)||(21917523-21917564)
chr7 (182-222)||(25986924-25986965)
chr7 (182-222)||(30140919-30140960)
chr7 (182-222)||(35121686-35121727)
chr7 (181-222)||(36203994-36204035)
chr7 (182-222)||(37452322-37452363)
chr7 (182-222)||(47258962-47259003)
chr7 (183-222)||(388174-388214)
chr7 (183-222)||(4061261-4061301)
chr7 (183-222)||(8409093-8409133)
chr7 (183-222)||(10319166-10319206)
chr7 (183-222)||(26612616-26612656)
chr7 (183-222)||(30699297-30699337)
chr7 (183-222)||(38445679-38445719)
chr7 (182-222)||(40790944-40790984)
[»] scaffold2010 (1 HSPs)
scaffold2010 (169-222)||(479-533)
[»] chr6 (22 HSPs)
chr6 (181-222)||(11277624-11277666)
chr6 (178-222)||(1897152-1897197)
chr6 (183-222)||(9952188-9952227)
chr6 (181-222)||(2565076-2565118)
chr6 (181-222)||(2565352-2565394)
chr6 (181-222)||(31740767-31740809)
chr6 (181-222)||(34705374-34705416)
chr6 (181-222)||(378512-378553)
chr6 (182-222)||(2100654-2100695)
chr6 (186-222)||(10977931-10977968)
chr6 (182-222)||(11109007-11109048)
chr6 (182-222)||(11322298-11322339)
chr6 (182-222)||(14997008-14997049)
chr6 (182-222)||(29696847-29696888)
chr6 (182-222)||(30965690-30965731)
chr6 (183-222)||(1814976-1815016)
chr6 (183-222)||(8160599-8160639)
chr6 (183-222)||(10977658-10977698)
chr6 (183-222)||(11746252-11746292)
chr6 (175-222)||(20080110-20080158)
chr6 (183-222)||(28930737-28930777)
chr6 (183-222)||(32591876-32591916)
[»] scaffold0272 (2 HSPs)
scaffold0272 (182-222)||(10834-10875)
scaffold0272 (181-222)||(21122-21164)
[»] scaffold0047 (1 HSPs)
scaffold0047 (181-222)||(63337-63378)
[»] chr4 (39 HSPs)
chr4 (182-222)||(39332318-39332359)
chr4 (181-222)||(54606886-54606927)
chr4 (171-218)||(35835764-35835812)
chr4 (183-222)||(48277916-48277956)
chr4 (181-222)||(5344268-5344310)
chr4 (181-222)||(11530033-11530075)
chr4 (181-222)||(12640818-12640860)
chr4 (181-222)||(24296773-24296815)
chr4 (181-222)||(34362818-34362860)
chr4 (181-222)||(44921883-44921925)
chr4 (181-222)||(45289773-45289815)
chr4 (181-222)||(46282758-46282800)
chr4 (181-222)||(47853974-47854016)
chr4 (182-222)||(232964-233005)
chr4 (182-222)||(7644456-7644497)
chr4 (182-222)||(10046209-10046250)
chr4 (182-222)||(13607916-13607957)
chr4 (182-222)||(14578713-14578754)
chr4 (182-222)||(18988178-18988219)
chr4 (182-222)||(21537150-21537191)
chr4 (182-222)||(26675052-26675093)
chr4 (182-222)||(31250742-31250783)
chr4 (182-222)||(38371270-38371311)
chr4 (182-222)||(39136297-39136338)
chr4 (182-222)||(49869692-49869733)
chr4 (183-222)||(3556187-3556227)
chr4 (186-221)||(4107508-4107544)
chr4 (186-222)||(9695368-9695404)
chr4 (182-222)||(10726209-10726249)
chr4 (182-222)||(10939978-10940018)
chr4 (183-222)||(13019273-13019313)
chr4 (183-222)||(17554319-17554359)
chr4 (183-222)||(19956997-19957037)
chr4 (182-221)||(24542753-24542793)
chr4 (183-222)||(34363091-34363131)
chr4 (181-213)||(36095815-36095847)
chr4 (179-222)||(41205494-41205538)
chr4 (181-213)||(43051276-43051308)
chr4 (186-222)||(47096698-47096734)
[»] chr5 (27 HSPs)
chr5 (183-222)||(15738074-15738114)
chr5 (176-222)||(30894389-30894436)
chr5 (181-222)||(2546645-2546687)
chr5 (181-222)||(2710610-2710652)
chr5 (181-222)||(16597313-16597355)
chr5 (181-222)||(23263143-23263185)
chr5 (181-222)||(28736713-28736755)
chr5 (185-222)||(29401092-29401130)
chr5 (181-222)||(34082374-34082416)
chr5 (181-222)||(34606643-34606685)
chr5 (181-222)||(35306975-35307017)
chr5 (181-222)||(40687664-40687706)
chr5 (182-222)||(3020867-3020908)
chr5 (182-222)||(10331955-10331996)
chr5 (182-222)||(12049390-12049431)
chr5 (182-222)||(13765258-13765299)
chr5 (185-222)||(20040984-20041021)
chr5 (182-222)||(25631085-25631126)
chr5 (182-222)||(31456134-31456175)
chr5 (182-222)||(34734346-34734387)
chr5 (182-222)||(37887671-37887712)
chr5 (182-222)||(40687942-40687983)
chr5 (183-222)||(8339959-8339999)
chr5 (181-213)||(11350806-11350838)
chr5 (183-222)||(26323648-26323688)
chr5 (183-222)||(32555764-32555804)
chr5 (183-222)||(34169061-34169101)
[»] scaffold0182 (1 HSPs)
scaffold0182 (181-222)||(20593-20635)
[»] scaffold0592 (1 HSPs)
scaffold0592 (182-222)||(8983-9024)
[»] scaffold0227 (1 HSPs)
scaffold0227 (182-222)||(762-803)
[»] scaffold0014 (1 HSPs)
scaffold0014 (182-222)||(79260-79301)
[»] scaffold0005 (1 HSPs)
scaffold0005 (182-222)||(238621-238662)
[»] scaffold0001 (1 HSPs)
scaffold0001 (175-222)||(400979-401027)


Alignment Details
Target: chr3 (Bit Score: 178; Significance: 4e-96; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 19647005 - 19646824
Alignment:
Q  1 catctattgaatatacttgtgcatgtgcctgcttccactgttgaatattgcactgtggcaatggtggctaggatgacaaagaaataaaagaaattggaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19647005 catctattgaatatacttgtgcatgtgcctgcttccactgttgaatattgcactgtggcaatggtggctaggatgacaaagaaataaaagaaatttgaga 19646906  T
Q  101 tgtggtttgccattagtaaacaattctttgctatgtaaaagattatatcaaattttttcggatcaataaatataataaacaa 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19646905 tgtggtttgccattagtaaacaattctttgctatgtaaaagattatatcaaattttttcggatcaataaatataataaacaa 19646824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 2239225 - 2239267
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  2239225 aaggcttaattgcatttttggacccctatcttttcaaaagttg 2239267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 28097415 - 28097457
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  28097415 aaggcttaattgcatttttggacccctatcttttcaaaagttg 28097457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 1589066 - 1589107
Alignment:
Q  181 aaggcttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    |||| ||||||| |||||||||||||||||||||||||||||    
T  1589066 aaggtttaattgtatttttgacccctatcttttcaaaagttg 1589107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 787099 - 787139
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  787099 ggcttaattgcatttttggacccctatcttttcaaaagttg 787139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 25126318 - 25126271
Alignment:
Q  176 taaacaaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||||||||    
T  25126318 taaactaggcttaattgcacttttggacccctatcttttcaaaagttg 25126271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 2118711 - 2118753
Alignment:
Q  181 aaggcttaattgcattttt-gacccctatcttttcaaaagttg 222  Q
    |||||||||||||| |||| |||||||||||||||||||||||    
T  2118711 aaggcttaattgcacttttagacccctatcttttcaaaagttg 2118753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 9153475 - 9153517
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  9153475 aaggcttaattgcacttttggacccctatcttttcaaaagttg 9153517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 30761115 - 30761073
Alignment:
Q  181 aaggcttaattgcatttttga-cccctatcttttcaaaagttg 222  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  30761115 aaggcttaattgcacttttgaacccctatcttttcaaaagttg 30761073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 32205162 - 32205120
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  32205162 aaggcttaattgcacttttggacccctatcttttcaaaagttg 32205120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 33576724 - 33576682
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  33576724 aaggcttaattgcacttttggacccctatcttttcaaaagttg 33576682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 36567194 - 36567148
Alignment:
Q  177 aaacaaggcttaattgcatttttgacc-cctatcttttcaaaagttg 222  Q
    |||||||||||||||||||||||| || |||| ||||||||||||||    
T  36567194 aaacaaggcttaattgcatttttggcctcctaacttttcaaaagttg 36567148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 41223511 - 41223553
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  41223511 aaggcttaattgcacttttggacccctatcttttcaaaagttg 41223553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 53531804 - 53531846
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  53531804 aaggcttaattgcacttttggacccctatcttttcaaaagttg 53531846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 19914475 - 19914516
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  19914475 aggcttaattgcacttttggacccctatcttttcaaaagttg 19914516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 21842029 - 21841984
Alignment:
Q  178 aacaaggcttaattgcattttt-gacccctatcttttcaaaagttg 222  Q
    ||||||||||||||||| |||| |||| ||||||||||||||||||    
T  21842029 aacaaggcttaattgcacttttagacctctatcttttcaaaagttg 21841984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 31117619 - 31117660
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  31117619 aggcttaattgcacttttggacccctatcttttcaaaagttg 31117660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 38511971 - 38511930
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  38511971 aggcttaattgcacttttggacccctatcttttcaaaagttg 38511930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 47943774 - 47943733
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  47943774 aggcttaattgcacttttggacccctatcttttcaaaagttg 47943733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 2119027 - 2118987
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  2119027 ggcttaattgcacttttggacccctatcttttcaaaagttg 2118987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 17483561 - 17483601
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  17483561 ggcttaattgcacttttggacccctatcttttcaaaagttg 17483601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 17483871 - 17483831
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  17483871 ggcttaattgcacttttggacccctatcttttcaaaagttg 17483831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 172
Target Start/End: Complemental strand, 19653782 - 19653742
Alignment:
Q  133 atgtaaaagattatatcaaatt-ttttcggatcaataaata 172  Q
    |||||||||||||||||||||| |||||||||||| |||||    
T  19653782 atgtaaaagattatatcaaatttttttcggatcaagaaata 19653742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 41282160 - 41282120
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  41282160 ggcttaattgcacttttggacccctatcttttcaaaagttg 41282120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 41722297 - 41722257
Alignment:
Q  183 ggcttaattgcatttttga-cccctatcttttcaaaagttg 222  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  41722297 ggcttaattgcacttttgaacccctatcttttcaaaagttg 41722257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 221
Target Start/End: Complemental strand, 44624540 - 44624500
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagtt 221  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  44624540 aggcttaattgcacttttggacccctatcttttcaaaagtt 44624500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 45760546 - 45760506
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  45760546 ggcttaattgcacttttggacccctatcttttcaaaagttg 45760506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 47922399 - 47922363
Alignment:
Q  186 ttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  47922399 ttaattgcacttttaacccctatcttttcaaaagttg 47922363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 51188001 - 51187961
Alignment:
Q  182 aggcttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    ||||||||||||| |||||||| ||||||||| ||||||||    
T  51188001 aggcttaattgcacttttgacctctatctttttaaaagttg 51187961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 51213307 - 51213347
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  51213307 ggcttaattgcacttttggacccctatcttttcaaaagttg 51213347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 217
Target Start/End: Original strand, 51860333 - 51860369
Alignment:
Q  182 aggcttaattgcattttt-gacccctatcttttcaaa 217  Q
    |||||||||||||||||| ||||||||||||||||||    
T  51860333 aggcttaattgcatttttggacccctatcttttcaaa 51860369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 53191276 - 53191236
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  53191276 ggcttaattgcatttttggacccctatctttccaaaagttg 53191236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 58 - 129
Target Start/End: Original strand, 18762603 - 18762674
Alignment:
Q  58 gcaatggtggctaggatgacaaagaaataaaagaaattggagatgtggtttgccattagtaaacaattcttt 129  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18762603 gcaatggtggctaggatgacaaagaaataaaagaaatttgagatgtggtttgccattagtaaacaattcttt 18762674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 58 - 129
Target Start/End: Original strand, 18773393 - 18773464
Alignment:
Q  58 gcaatggtggctaggatgacaaagaaataaaagaaattggagatgtggtttgccattagtaaacaattcttt 129  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18773393 gcaatggtggttaggatgacaaagaaataaaagaaatttgagatgtggtttgccattagtaaacaattcttt 18773464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18773232 - 18773285
Alignment:
Q  1 catctattgaatatacttgtgcatgtgcctgcttccactgttgaatattgcact 54  Q
    |||||||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  18773232 catctattgaatatacttgtgcatttgcctgcgtccaccgttgaatattgcact 18773285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 19025822 - 19025864
Alignment:
Q  181 aaggcttaattgca-tttttgacccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  19025822 aaggcttaattgcactttttgacccctatcttttcaaaagttg 19025864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 37334604 - 37334644
Alignment:
Q  182 aggcttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  37334604 aggcttaattgcacttttggcccctatcttttcaaaagttg 37334644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 1467123 - 1467081
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  1467123 aaggcttaattgcacttttggacccctatcttttcaaaagttg 1467081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 24205292 - 24205334
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  24205292 aaggcttaattgcacttttggacccctatcttttcaaaagttg 24205334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 31784250 - 31784292
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  31784250 aaggcttaattgcacttttggacccctatcttttcaaaagttg 31784292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 34981386 - 34981424
Alignment:
Q  184 gcttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  34981386 gcttaattgcatttttggaccctatcttttcaaaagttg 34981424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 40493960 - 40493918
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  40493960 aaggcttaattgcacttttggacccctatcttttcaaaagttg 40493918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 40711334 - 40711376
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||||| ||||||||||||||||||||||    
T  40711334 aaggcttaattgtatttttggacccctatcttttcaaaagttg 40711376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 40938792 - 40938834
Alignment:
Q  181 aaggcttaattgcatttttga-cccctatcttttcaaaagttg 222  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  40938792 aaggcttaattgcacttttgaccccctatcttttcaaaagttg 40938834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 16238533 - 16238496
Alignment:
Q  186 ttaattgcatttttga-cccctatcttttcaaaagttg 222  Q
    |||||||||||||||| |||||||||||||||||||||    
T  16238533 ttaattgcatttttgatcccctatcttttcaaaagttg 16238496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 19885861 - 19885898
Alignment:
Q  185 cttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  19885861 cttaattgcacttttggcccctatcttttcaaaagttg 19885898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 20436057 - 20436098
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  20436057 aggcttaattgcacttttggacccctatcttttcaaaagttg 20436098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 21024775 - 21024734
Alignment:
Q  182 aggcttaattgcatttttgacccc-tatcttttcaaaagttg 222  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  21024775 aggcttaattgcacttttgaccccctatcttttcaaaagttg 21024734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 22194447 - 22194488
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||| |||||||| ||||||||||||||||||||||    
T  22194447 aggcttaatttcatttttggacccctatcttttcaaaagttg 22194488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 24895225 - 24895184
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  24895225 aggcttaattgcacttttggacccctatcttttcaaaagttg 24895184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 31784565 - 31784524
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  31784565 aggcttaattgcatttttggatccctatcttttcaaaagttg 31784524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 33004708 - 33004749
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  33004708 aggcttaattgcacttttggacccctatcttttcaaaagttg 33004749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 34981692 - 34981655
Alignment:
Q  186 ttaattgcattttt-gacccctatcttttcaaaagttg 222  Q
    |||||||||||||| |||||||||||||||||||||||    
T  34981692 ttaattgcatttttagacccctatcttttcaaaagttg 34981655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 35173124 - 35173087
Alignment:
Q  185 cttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  35173124 cttaattgcacttttggcccctatcttttcaaaagttg 35173087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 41072142 - 41072101
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  41072142 aggcttaattgcatttttggacccctatctttccaaaagttg 41072101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 2638818 - 2638850
Alignment:
Q  181 aaggcttaattgcatttttgacccctatctttt 213  Q
    ||||||||||||||||||| |||||||||||||    
T  2638818 aaggcttaattgcatttttcacccctatctttt 2638850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 18296753 - 18296717
Alignment:
Q  177 aaacaaggcttaattgcatttttgacccctatctttt 213  Q
    |||||||||||||||||| |||| |||||||||||||    
T  18296753 aaacaaggcttaattgcacttttcacccctatctttt 18296717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 21552541 - 21552581
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  21552541 ggcttaattgcacttttggacccctatcttttcaaaagttg 21552581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 22194761 - 22194721
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  22194761 ggcttaattgcacttttggacccctatcttttcaaaagttg 22194721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 38731279 - 38731319
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  38731279 ggcttaattgcacttttggacccctatcttttcaaaagttg 38731319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 39642729 - 39642769
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  39642729 ggcttaattgcacttttggacccctatcttttcaaaagttg 39642769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000001; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 36624225 - 36624184
Alignment:
Q  181 aaggcttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  36624225 aaggcttaattgcatttttggcccctatcttttcaaaagttg 36624184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 29197298 - 29197338
Alignment:
Q  182 aggcttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  29197298 aggcttaattgcacttttgacccctatcttttcaaaagttg 29197338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 38701973 - 38701933
Alignment:
Q  182 aggcttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  38701973 aggcttaattgcacttttgacccctatcttttcaaaagttg 38701933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 5734182 - 5734224
Alignment:
Q  181 aaggcttaattgcatttttga-cccctatcttttcaaaagttg 222  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  5734182 aaggcttaattgcatttttgaacccctatcttttcaaaagttg 5734224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 7150840 - 7150882
Alignment:
Q  181 aaggcttaattgcatttttga-cccctatcttttcaaaagttg 222  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  7150840 aaggcttaattgcatttttgaacccctatcttttcaaaagttg 7150882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 4146784 - 4146825
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  4146784 aggcttaattgcatttttggacccctatcttttcaaaagttg 4146825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 37205539 - 37205580
Alignment:
Q  182 aggcttaattgcatttttga-cccctatcttttcaaaagttg 222  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  37205539 aggcttaattgcatttttgaacccctatcttttcaaaagttg 37205580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 2321514 - 2321556
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  2321514 aaggcttaattgcacttttggacccctatcttttcaaaagttg 2321556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 6745309 - 6745267
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  6745309 aaggcttaattgcacttttggacccctatcttttcaaaagttg 6745267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 8870576 - 8870534
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||||||||| |||||||||||| |||||||||    
T  8870576 aaggcttaattgcatttttgaacccctatctttccaaaagttg 8870534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 17943356 - 17943398
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  17943356 aaggcttaattgcacttttggacccctatcttttcaaaagttg 17943398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 18530830 - 18530872
Alignment:
Q  181 aaggcttaattgcatttttga-cccctatcttttcaaaagttg 222  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  18530830 aaggcttaattgcacttttgaacccctatcttttcaaaagttg 18530872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 23234095 - 23234053
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  23234095 aaggcttaattgcacttttggacccctatcttttcaaaagttg 23234053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 37639505 - 37639547
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  37639505 aaggcttaattgcacttttggacccctatcttttcaaaagttg 37639547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 41206447 - 41206405
Alignment:
Q  181 aaggcttaattgcatttttga-cccctatcttttcaaaagttg 222  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  41206447 aaggcttaattgcacttttgaacccctatcttttcaaaagttg 41206405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 44807390 - 44807348
Alignment:
Q  181 aaggcttaattgcatttttgacccc-tatcttttcaaaagttg 222  Q
    |||||||||||||| |||||||||| |||||||||||||||||    
T  44807390 aaggcttaattgcacttttgaccccctatcttttcaaaagttg 44807348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 414969 - 414928
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  414969 aggcttaattgcacttttggacccctatcttttcaaaagttg 414928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 6014418 - 6014459
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  6014418 aggcttaattgcacttttggacccctatcttttcaaaagttg 6014459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 6335642 - 6335601
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  6335642 aggcttaattgcacttttggacccctatcttttcaaaagttg 6335601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 7658601 - 7658642
Alignment:
Q  182 aggcttaattgcatttttgacccc-tatcttttcaaaagttg 222  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  7658601 aggcttaattgcacttttgaccccctatcttttcaaaagttg 7658642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 15187927 - 15187968
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  15187927 aggcttaattgcacttttggacccctatcttttcaaaagttg 15187968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 16531563 - 16531522
Alignment:
Q  182 aggcttaattgcattttt-gacccctatcttttcaaaagttg 222  Q
    ||||||||||||| |||| |||||||||||||||||||||||    
T  16531563 aggcttaattgcacttttagacccctatcttttcaaaagttg 16531522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 33687801 - 33687760
Alignment:
Q  182 aggcttaattgcatttttgacccc-tatcttttcaaaagttg 222  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  33687801 aggcttaattgcacttttgaccccttatcttttcaaaagttg 33687760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 36623903 - 36623944
Alignment:
Q  181 aaggcttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||||| ||||||| |||||||||||    
T  36623903 aaggcttaattgcacttttgactcctatctcttcaaaagttg 36623944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 37953373 - 37953414
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  37953373 aggcttaattgcacttttggacccctatcttttcaaaagttg 37953414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 42267455 - 42267496
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  42267455 aggcttaattgcacttttggacccctatcttttcaaaagttg 42267496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 42930928 - 42930891
Alignment:
Q  186 ttaattgca-tttttgacccctatcttttcaaaagttg 222  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  42930928 ttaattgcactttttgacccctatcttttcaaaagttg 42930891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 45106434 - 45106475
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  45106434 aggcttaattgcacttttggacccctatcttttcaaaagttg 45106475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 45516234 - 45516193
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||||||||| || |||||||||||||||||||    
T  45516234 aggcttaattgcatttttggactcctatcttttcaaaagttg 45516193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 4107161 - 4107121
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  4107161 ggcttaattgcacttttggacccctatcttttcaaaagttg 4107121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 4167513 - 4167473
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  4167513 ggcttaattgcacttttggacccctatcttttcaaaagttg 4167473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 6641911 - 6641871
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  6641911 ggcttaattgcacttttggacccctatcttttcaaaagttg 6641871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 9823421 - 9823385
Alignment:
Q  177 aaacaaggcttaattgcatttttgacccctatctttt 213  Q
    |||||||||||||||||| |||| |||||||||||||    
T  9823421 aaacaaggcttaattgcacttttcacccctatctttt 9823385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 10285102 - 10285142
Alignment:
Q  182 aggcttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    ||||||||||||||||||| |||||||||||  ||||||||    
T  10285102 aggcttaattgcatttttggcccctatctttctaaaagttg 10285142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 14024353 - 14024313
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  14024353 ggcttaattgcatttttggacccctatctttccaaaagttg 14024313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 16531248 - 16531288
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||| ||||||| ||||||||||||||||||||||    
T  16531248 ggcttaattgtatttttggacccctatcttttcaaaagttg 16531288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 23233781 - 23233821
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  23233781 ggcttaattgcacttttggacccctatcttttcaaaagttg 23233821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 23623421 - 23623461
Alignment:
Q  183 ggcttaattgcatttttgacccc-tatcttttcaaaagttg 222  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  23623421 ggcttaattgcacttttgaccccatatcttttcaaaagttg 23623461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 27339856 - 27339816
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||||||| ||||||||||||| ||||||||    
T  27339856 ggcttaattgcatttttggacccctatctttttaaaagttg 27339816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 34608692 - 34608652
Alignment:
Q  182 aggcttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||||||| |||||||| ||||||||    
T  34608692 aggcttaattgcacttttgacccatatctttttaaaagttg 34608652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 42866406 - 42866366
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  42866406 ggcttaattgcacttttggacccctatcttttcaaaagttg 42866366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 26932581 - 26932622
Alignment:
Q  181 aaggcttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  26932581 aaggcttaattgcacttttgacccctatcttttcaaaagttg 26932622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 14738 - 14780
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  14738 aaggcttaattgcatttttggacccctatcttttcaaaagttg 14780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 7598921 - 7598879
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  7598921 aaggcttaattgcatttttggacccctatcttttcaaaagttg 7598879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 16490973 - 16491014
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  16490973 aggcttaattgcatttttggacccctatcttttcaaaagttg 16491014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 44846917 - 44846958
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  44846917 aggcttaattgcatttttggacccctatcttttcaaaagttg 44846958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 52201364 - 52201405
Alignment:
Q  181 aaggcttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| |||||||||||||||||||||    
T  52201364 aaggcttaattgcacttttggcccctatcttttcaaaagttg 52201405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 21697187 - 21697147
Alignment:
Q  182 aggcttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    ||||| ||||||| |||||||||||||||||||||||||||    
T  21697187 aggctcaattgcacttttgacccctatcttttcaaaagttg 21697147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 51196001 - 51195957
Alignment:
Q  174 aataaacaaggcttaattgcatttttgacccctatcttttcaaaa 218  Q
    |||||| || ||||||||||||||||| |||||||||||||||||    
T  51196001 aataaaaaaagcttaattgcatttttggcccctatcttttcaaaa 51195957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 15054 - 15015
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagt 220  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  15054 aggcttaattgcatttttggacccctatcttttcaaaagt 15015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 6912217 - 6912256
Alignment:
Q  183 ggcttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  6912217 ggcttaattgcacttttggcccctatcttttcaaaagttg 6912256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 1712368 - 1712410
Alignment:
Q  181 aaggcttaattgcatttttga-cccctatcttttcaaaagttg 222  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  1712368 aaggcttaattgcacttttgaccccctatcttttcaaaagttg 1712410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 8770461 - 8770503
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  8770461 aaggcttaattgcacttttggacccctatcttttcaaaagttg 8770503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 11018717 - 11018675
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  11018717 aaggcttaattgcacttttggacccctatcttttcaaaagttg 11018675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 15911666 - 15911712
Alignment:
Q  177 aaacaaggcttaattgca-tttttgacccctatcttttcaaaagttg 222  Q
    |||||||||||||||||| |||| | |||||||||||||||||||||    
T  15911666 aaacaaggcttaattgcacttttggccccctatcttttcaaaagttg 15911712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 23342280 - 23342234
Alignment:
Q  177 aaacaaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||||||| ||||| |||||||||||| |||||||||    
T  23342280 aaacaaggcttaattgcacttttggacccctatctttccaaaagttg 23342234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 32341807 - 32341765
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  32341807 aaggcttaattgcacttttggacccctatcttttcaaaagttg 32341765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 39427409 - 39427451
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  39427409 aaggcttaattgcacttttggacccctatcttttcaaaagttg 39427451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 42406881 - 42406923
Alignment:
Q  181 aaggcttaattgcatttttga-cccctatcttttcaaaagttg 222  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  42406881 aaggcttaattgcacttttgaacccctatcttttcaaaagttg 42406923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 49227118 - 49227160
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||| ||||||||||||||| ||||||||||||||||||||||    
T  49227118 aaggtttaattgcatttttggacccctatcttttcaaaagttg 49227160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 52143480 - 52143438
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  52143480 aaggcttaattgcacttttggacccctatcttttcaaaagttg 52143438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 6606534 - 6606575
Alignment:
Q  181 aaggcttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    |||||||||||| | ||||| |||||||||||||||||||||    
T  6606534 aaggcttaattgtacttttgccccctatcttttcaaaagttg 6606575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 6809379 - 6809342
Alignment:
Q  186 ttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  6809379 ttaattgcatttttggacccctatcttttcaaaagttg 6809342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 20471726 - 20471685
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  20471726 aggcttaattgcatttttgaacccctatctttccaaaagttg 20471685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 20559811 - 20559852
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  20559811 aggcttaattgcatttttgaacccctatctttccaaaagttg 20559852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 22071166 - 22071203
Alignment:
Q  186 ttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  22071166 ttaattgcatttttggacccctatcttttcaaaagttg 22071203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 22204304 - 22204345
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  22204304 aggcttaattgcacttttggacccctatcttttcaaaagttg 22204345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 23341963 - 23342004
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  23341963 aggcttaattgcacttttggacccctatcttttcaaaagttg 23342004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 26811452 - 26811493
Alignment:
Q  182 aggcttaattgcatttttgacccc-tatcttttcaaaagttg 222  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  26811452 aggcttaattgcacttttgaccccctatcttttcaaaagttg 26811493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 33811739 - 33811698
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  33811739 aggcttaattgcatttttggacccctatctttccaaaagttg 33811698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 33871209 - 33871168
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  33871209 aggcttaattgcatttttggacccctatctttccaaaagttg 33871168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 37028927 - 37028968
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  37028927 aggcttaattgcacttttggacccctatcttttcaaaagttg 37028968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 39427727 - 39427686
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  39427727 aggcttaattgcatttttggacccctatctttccaaaagttg 39427686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 43914894 - 43914853
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  43914894 aggcttaattgcacttttggacccctatcttttcaaaagttg 43914853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 45884947 - 45884988
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  45884947 aggcttaattgcacttttggacccctatcttttcaaaagttg 45884988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 6183295 - 6183255
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  6183295 ggcttaattgcacttttggacccctatcttttcaaaagttg 6183255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 6491729 - 6491689
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  6491729 ggcttaattgcacttttggacccctatcttttcaaaagttg 6491689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 12690013 - 12690061
Alignment:
Q  175 ataaacaaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||| |||||||||||||| ||||| |||||||||||| |||||||||    
T  12690013 ataaaaaaggcttaattgcacttttggacccctatctttccaaaagttg 12690061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 13791888 - 13791848
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  13791888 ggcttaattgcacttttggacccctatcttttcaaaagttg 13791848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 21932101 - 21932061
Alignment:
Q  183 ggcttaattgca-tttttgacccctatcttttcaaaagttg 222  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  21932101 ggcttaattgcactttttgccccctatcttttcaaaagttg 21932061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 22075664 - 22075624
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  22075664 ggcttaattgcacttttggacccctatcttttcaaaagttg 22075624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 27855563 - 27855603
Alignment:
Q  183 ggcttaattgcatttttga-cccctatcttttcaaaagttg 222  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  27855563 ggcttaattgcacttttgaacccctatcttttcaaaagttg 27855603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 38622716 - 38622676
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  38622716 ggcttaattgcacttttggacccctatcttttcaaaagttg 38622676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 52149827 - 52149787
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  52149827 ggcttaattgcacttttggacccctatcttttcaaaagttg 52149787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000005; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 37858366 - 37858326
Alignment:
Q  182 aggcttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  37858366 aggcttaattgcacttttgacccctatcttttcaaaagttg 37858326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 45863022 - 45863062
Alignment:
Q  182 aggcttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  45863022 aggcttaattgcacttttgacccctatcttttcaaaagttg 45863062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 17802220 - 17802181
Alignment:
Q  183 ggcttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  17802220 ggcttaattgcacttttgacccctatcttttcaaaagttg 17802181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 10350804 - 10350846
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  10350804 aaggcttaattgcatttttggacccctatcttttcaaaagttg 10350846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 23740262 - 23740304
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  23740262 aaggcttaattgcatttttggacccctatcttttcaaaagttg 23740304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 16879234 - 16879275
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  16879234 aggcttaattgcatttttggacccctatcttttcaaaagttg 16879275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 17167853 - 17167894
Alignment:
Q  181 aaggcttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| |||||||||||||||||||||    
T  17167853 aaggcttaattgcacttttggcccctatcttttcaaaagttg 17167894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 38882369 - 38882410
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  38882369 aggcttaattgcatttttgtacccctatcttttcaaaagttg 38882410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 42997365 - 42997325
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  42997365 ggcttaattgcatttttggacccctatcttttcaaaagttg 42997325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 10318880 - 10318931
Alignment:
Q  172 ataataaacaaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||| ||| |||||||||||||| ||||| ||||||||||||||||||||||    
T  10318880 ataaaaaaaaaggcttaattgcacttttggacccctatcttttcaaaagttg 10318931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 3925791 - 3925833
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  3925791 aaggcttaattgcacttttggacccctatcttttcaaaagttg 3925833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 18852493 - 18852535
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  18852493 aaggcttaattgcacttttggacccctatcttttcaaaagttg 18852535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 23909893 - 23909935
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  23909893 aaggcttaattgcacttttggacccctatcttttcaaaagttg 23909935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 29163098 - 29163140
Alignment:
Q  181 aaggcttaattgca-tttttgacccctatcttttcaaaagttg 222  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  29163098 aaggcttaattgcactttttgccccctatcttttcaaaagttg 29163140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 34533528 - 34533486
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  34533528 aaggcttaattgcacttttggacccctatcttttcaaaagttg 34533486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 43408519 - 43408477
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  43408519 aaggcttaattgcacttttggacccctatcttttcaaaagttg 43408477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 931022 - 930981
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  931022 aggcttaattgcacttttggacccctatcttttcaaaagttg 930981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 7195459 - 7195496
Alignment:
Q  186 ttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  7195459 ttaattgcatttttggacccctatcttttcaaaagttg 7195496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 9629330 - 9629289
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  9629330 aggcttaattgcatttttggacccctatctttccaaaagttg 9629289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 19778568 - 19778527
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  19778568 aggcttaattgcacttttggacccctatcttttcaaaagttg 19778527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 21917564 - 21917523
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  21917564 aggcttaattgcacttttggacccctatcttttcaaaagttg 21917523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 25986924 - 25986965
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  25986924 aggcttaattgcacttttggacccctatcttttcaaaagttg 25986965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 30140919 - 30140960
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  30140919 aggcttaattgcatttttggacccctatctttccaaaagttg 30140960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 35121727 - 35121686
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  35121727 aggcttaattgcacttttggacccctatcttttcaaaagttg 35121686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 36203994 - 36204035
Alignment:
Q  181 aaggcttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    |||||||||||||| |||||||||||||||||  ||||||||    
T  36203994 aaggcttaattgcacttttgacccctatctttctaaaagttg 36204035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 37452363 - 37452322
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  37452363 aggcttaattgcacttttggacccctatcttttcaaaagttg 37452322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 47258962 - 47259003
Alignment:
Q  182 aggcttaattgcatttttgaccc-ctatcttttcaaaagttg 222  Q
    ||||||||||||||||||| ||| ||||||||||||||||||    
T  47258962 aggcttaattgcatttttggccctctatcttttcaaaagttg 47259003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 388214 - 388174
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  388214 ggcttaattgcacttttggacccctatcttttcaaaagttg 388174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 4061301 - 4061261
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  4061301 ggcttaattgcatttttggacccctatctttccaaaagttg 4061261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 8409093 - 8409133
Alignment:
Q  183 ggcttaattgcatttttgac-ccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||||| ||||||||||||||||||||    
T  8409093 ggcttaattgcacttttgacaccctatcttttcaaaagttg 8409133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 10319206 - 10319166
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  10319206 ggcttaattgcacttttggacccctatcttttcaaaagttg 10319166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 26612656 - 26612616
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  26612656 ggcttaattgcacttttggacccctatcttttcaaaagttg 26612616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 30699337 - 30699297
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  30699337 ggcttaattgcacttttggacccctatcttttcaaaagttg 30699297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 38445719 - 38445679
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  38445719 ggcttaattgcacttttggacccctatcttttcaaaagttg 38445679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 40790984 - 40790944
Alignment:
Q  182 aggcttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||| |||||||||    
T  40790984 aggcttaattgcacttttggcccctatctttccaaaagttg 40790944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2010 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold2010
Description:

Target: scaffold2010; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 222
Target Start/End: Original strand, 479 - 533
Alignment:
Q  169 aatataataaacaaggcttaattgcatttttga-cccctatcttttcaaaagttg 222  Q
    ||||||| ||| |||||||||||||| |||||| |||||||||||||||||||||    
T  479 aatataaaaaaaaaggcttaattgcacttttgaccccctatcttttcaaaagttg 533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.00000000008; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 11277624 - 11277666
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  11277624 aaggcttaattgcatttttggacccctatcttttcaaaagttg 11277666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 1897197 - 1897152
Alignment:
Q  178 aacaaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||    
T  1897197 aacaaggcttaattgcatttttgaacccctatctttccaaaagttg 1897152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 9952227 - 9952188
Alignment:
Q  183 ggcttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  9952227 ggcttaattgcacttttgacccctatctttttaaaagttg 9952188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 2565076 - 2565118
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  2565076 aaggcttaattgcacttttggacccctatcttttcaaaagttg 2565118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 2565394 - 2565352
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  2565394 aaggcttaattgcacttttggacccctatcttttcaaaagttg 2565352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 31740767 - 31740809
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  31740767 aaggcttaattgcacttttggacccctatcttttcaaaagttg 31740809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 34705374 - 34705416
Alignment:
Q  181 aaggcttaattgcattttt-gacccctatcttttcaaaagttg 222  Q
    ||||||||||||||||||| ||||||||| |||||||||||||    
T  34705374 aaggcttaattgcatttttggacccctatattttcaaaagttg 34705416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 378553 - 378512
Alignment:
Q  181 aaggcttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||||||||||||||| |||| ||||    
T  378553 aaggcttaattgcacttttgacccctatctttccaaatgttg 378512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 2100695 - 2100654
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  2100695 aggcttaattgcacttttggacccctatcttttcaaaagttg 2100654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 10977968 - 10977931
Alignment:
Q  186 ttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  10977968 ttaattgcatttttggacccctatcttttcaaaagttg 10977931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 11109048 - 11109007
Alignment:
Q  182 aggcttaattgcatttttgacccc-tatcttttcaaaagttg 222  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  11109048 aggcttaattgcacttttgaccccttatcttttcaaaagttg 11109007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 11322339 - 11322298
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  11322339 aggcttaattgcacttttggacccctatcttttcaaaagttg 11322298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 14997008 - 14997049
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  14997008 aggcttaattgcatttttggacccctatctttccaaaagttg 14997049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 29696847 - 29696888
Alignment:
Q  182 aggcttaattgcattttt-gacccctatcttttcaaaagttg 222  Q
    ||||||||||||| |||| |||||||||||||||||||||||    
T  29696847 aggcttaattgcacttttagacccctatcttttcaaaagttg 29696888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 30965690 - 30965731
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  30965690 aggcttaattgcacttttggacccctatcttttcaaaagttg 30965731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 1814976 - 1815016
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  1814976 ggcttaattgcacttttggacccctatcttttcaaaagttg 1815016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 8160599 - 8160639
Alignment:
Q  183 ggcttaattgcatttttga-cccctatcttttcaaaagttg 222  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  8160599 ggcttaattgcacttttgatcccctatcttttcaaaagttg 8160639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 10977658 - 10977698
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  10977658 ggcttaattgcacttttggacccctatcttttcaaaagttg 10977698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 11746292 - 11746252
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  11746292 ggcttaattgcacttttggacccctatcttttcaaaagttg 11746252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 20080110 - 20080158
Alignment:
Q  175 ataaacaaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||| |||||||||||||| ||||| |||||||||||| |||||||||    
T  20080110 ataaataaggcttaattgcacttttggacccctatctttccaaaagttg 20080158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 28930777 - 28930737
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  28930777 ggcttaattgcacttttggacccctatcttttcaaaagttg 28930737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 32591916 - 32591876
Alignment:
Q  183 ggcttaattgcatttttgacccc-tatcttttcaaaagttg 222  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  32591916 ggcttaattgcacttttgaccccctatcttttcaaaagttg 32591876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 10875 - 10834
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  10875 aggcttaattgcatttttggacccctatcttttcaaaagttg 10834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 21164 - 21122
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||||||||| |||||||||||| |||||||||    
T  21164 aaggcttaattgcatttttggacccctatctttccaaaagttg 21122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 63378 - 63337
Alignment:
Q  181 aaggcttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||||||||||| |||||||||||||    
T  63378 aaggcttaattgcacttttgacccctattttttcaaaagttg 63337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 39332318 - 39332359
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  39332318 aggcttaattgcatttttggacccctatcttttcaaaagttg 39332359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 54606886 - 54606927
Alignment:
Q  181 aaggcttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  54606886 aaggcttaattgtattttggacccctatcttttcaaaagttg 54606927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 35835764 - 35835812
Alignment:
Q  171 tataataaacaaggcttaattgca-tttttgacccctatcttttcaaaa 218  Q
    ||||| |||||||||||||||||| |||| |||||||||||||||||||    
T  35835764 tataaaaaacaaggcttaattgcacttttggacccctatcttttcaaaa 35835812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 48277916 - 48277956
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  48277916 ggcttaattgcatttttggacccctatcttttcaaaagttg 48277956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 5344268 - 5344310
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  5344268 aaggcttaattgcacttttggacccctatcttttcaaaagttg 5344310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 11530075 - 11530033
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  11530075 aaggcttaattgcacttttggacccctatcttttcaaaagttg 11530033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 12640818 - 12640860
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  12640818 aaggcttaattgcacttttggacccctatcttttcaaaagttg 12640860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 24296815 - 24296773
Alignment:
Q  181 aaggcttaattgcatttttgacc-cctatcttttcaaaagttg 222  Q
    |||||||||||||| |||||||| |||||||||||||||||||    
T  24296815 aaggcttaattgcacttttgacctcctatcttttcaaaagttg 24296773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 34362818 - 34362860
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  34362818 aaggcttaattgcacttttggacccctatcttttcaaaagttg 34362860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 44921925 - 44921883
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  44921925 aaggcttaattgcacttttggacccctatcttttcaaaagttg 44921883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 45289815 - 45289773
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  45289815 aaggcttaattgcacttttggacccctatcttttcaaaagttg 45289773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 46282758 - 46282800
Alignment:
Q  181 aaggcttaattgcatttttga-cccctatcttttcaaaagttg 222  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  46282758 aaggcttaattgcacttttgaacccctatcttttcaaaagttg 46282800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 47853974 - 47854016
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  47853974 aaggcttaattgcacttttggacccctatcttttcaaaagttg 47854016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 233005 - 232964
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  233005 aggcttaattgcacttttggacccctatcttttcaaaagttg 232964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 7644456 - 7644497
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  7644456 aggcttaattgcacttttggacccctatcttttcaaaagttg 7644497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 10046250 - 10046209
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  10046250 aggcttaattgcacttttggacccctatcttttcaaaagttg 10046209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 13607916 - 13607957
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  13607916 aggcttaattgcatttttggacccctatctttccaaaagttg 13607957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 14578754 - 14578713
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  14578754 aggcttaattgcacttttggacccctatcttttcaaaagttg 14578713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 18988178 - 18988219
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  18988178 aggcttaattgcacttttggacccctatcttttcaaaagttg 18988219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 21537191 - 21537150
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  21537191 aggcttaattgcacttttggacccctatcttttcaaaagttg 21537150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 26675052 - 26675093
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  26675052 aggcttaattgcatttttggacccctatctttccaaaagttg 26675093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 31250783 - 31250742
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  31250783 aggcttaattgcacttttggacccctatcttttcaaaagttg 31250742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 38371270 - 38371311
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  38371270 aggcttaattgcacttttggacccctatcttttcaaaagttg 38371311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 39136297 - 39136338
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  39136297 aggcttaattgcacttttggacccctatcttttcaaaagttg 39136338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 49869733 - 49869692
Alignment:
Q  182 aggcttaattgcatttttgacc-cctatcttttcaaaagttg 222  Q
    ||||||||||||| |||||||| |||||||||||||||||||    
T  49869733 aggcttaattgcacttttgacctcctatcttttcaaaagttg 49869692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 3556227 - 3556187
Alignment:
Q  183 ggcttaattgcatttttgacccc-tatcttttcaaaagttg 222  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  3556227 ggcttaattgcatttttggccccctatcttttcaaaagttg 3556187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 221
Target Start/End: Original strand, 4107508 - 4107544
Alignment:
Q  186 ttaattgcatttttg-acccctatcttttcaaaagtt 221  Q
    ||||||||||||||| |||||||||||||||||||||    
T  4107508 ttaattgcatttttggacccctatcttttcaaaagtt 4107544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 9695404 - 9695368
Alignment:
Q  186 ttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  9695404 ttaattgcacttttgaccgctatcttttcaaaagttg 9695368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 10726249 - 10726209
Alignment:
Q  182 aggcttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    ||||||||||||| |||| ||| ||||||||||||||||||    
T  10726249 aggcttaattgcacttttaaccactatcttttcaaaagttg 10726209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 10940018 - 10939978
Alignment:
Q  182 aggcttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    ||||||||||||| |||| ||| ||||||||||||||||||    
T  10940018 aggcttaattgcacttttaaccactatcttttcaaaagttg 10939978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 13019273 - 13019313
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  13019273 ggcttaattgcacttttggacccctatcttttcaaaagttg 13019313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 17554359 - 17554319
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  17554359 ggcttaattgcacttttggacccctatcttttcaaaagttg 17554319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 19957037 - 19956997
Alignment:
Q  183 ggcttaattgcatttttga-cccctatcttttcaaaagttg 222  Q
    ||||||||||||||||||| || ||||||||||||||||||    
T  19957037 ggcttaattgcatttttgatcctctatcttttcaaaagttg 19956997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 221
Target Start/End: Original strand, 24542753 - 24542793
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagtt 221  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  24542753 aggcttaattgcacttttggacccctatcttttcaaaagtt 24542793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 34363131 - 34363091
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  34363131 ggcttaattgcacttttggacccctatcttttcaaaagttg 34363091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 36095815 - 36095847
Alignment:
Q  181 aaggcttaattgcatttttgacccctatctttt 213  Q
    ||||||||||||||||||| |||||||||||||    
T  36095815 aaggcttaattgcatttttcacccctatctttt 36095847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 222
Target Start/End: Original strand, 41205494 - 41205538
Alignment:
Q  179 acaaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||||| ||||| |||||||||||| |||||||||    
T  41205494 acaaggcttaattgcacttttggacccctatctttccaaaagttg 41205538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 43051308 - 43051276
Alignment:
Q  181 aaggcttaattgcatttttgacccctatctttt 213  Q
    ||||||||||||||||||| |||||||||||||    
T  43051308 aaggcttaattgcatttttcacccctatctttt 43051276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 47096734 - 47096698
Alignment:
Q  186 ttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  47096734 ttaattgcacttttggcccctatcttttcaaaagttg 47096698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000001; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 15738074 - 15738114
Alignment:
Q  183 ggcttaattgca-tttttgacccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  15738074 ggcttaattgcactttttgacccctatcttttcaaaagttg 15738114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 30894436 - 30894389
Alignment:
Q  176 taaacaaggcttaattgcattttt-gacccctatcttttcaaaagttg 222  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||    
T  30894436 taaaaaaggcttaattgcatttttggatccctatcttttcaaaagttg 30894389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 2546687 - 2546645
Alignment:
Q  181 aaggcttaattgcatttttga-cccctatcttttcaaaagttg 222  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  2546687 aaggcttaattgcacttttgaacccctatcttttcaaaagttg 2546645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 2710652 - 2710610
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  2710652 aaggcttaattgcacttttggacccctatcttttcaaaagttg 2710610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 16597355 - 16597313
Alignment:
Q  181 aaggcttaattgcatttttga-cccctatcttttcaaaagttg 222  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  16597355 aaggcttaattgcacttttgaacccctatcttttcaaaagttg 16597313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 23263143 - 23263185
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  23263143 aaggcttaattgcacttttggacccctatcttttcaaaagttg 23263185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 28736755 - 28736713
Alignment:
Q  181 aaggcttaattgcattttt-gacccctatcttttcaaaagttg 222  Q
    |||||||||||||| |||| |||||||||||||||||||||||    
T  28736755 aaggcttaattgcacttttagacccctatcttttcaaaagttg 28736713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 29401092 - 29401130
Alignment:
Q  185 cttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  29401092 cttaattgcatttttggacccctatcttttcaaaagttg 29401130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 34082416 - 34082374
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  34082416 aaggcttaattgcacttttggacccctatcttttcaaaagttg 34082374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 34606685 - 34606643
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  34606685 aaggcttaattgcacttttggacccctatcttttcaaaagttg 34606643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 35307017 - 35306975
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  35307017 aaggcttaattgcacttttggacccctatcttttcaaaagttg 35306975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 40687664 - 40687706
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  40687664 aaggcttaattgcacttttggacccctatcttttcaaaagttg 40687706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 3020908 - 3020867
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  3020908 aggcttaattgcacttttggacccctatcttttcaaaagttg 3020867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 10331955 - 10331996
Alignment:
Q  182 aggcttaattgcatttttgacccc-tatcttttcaaaagttg 222  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  10331955 aggcttaattgcacttttgaccccctatcttttcaaaagttg 10331996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 12049431 - 12049390
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  12049431 aggcttaattgcatttttggacccctatctttccaaaagttg 12049390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 13765258 - 13765299
Alignment:
Q  182 aggcttaattgcattttt-gacccctatcttttcaaaagttg 222  Q
    ||||||||||||| |||| |||||||||||||||||||||||    
T  13765258 aggcttaattgcacttttcgacccctatcttttcaaaagttg 13765299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 20041021 - 20040984
Alignment:
Q  185 cttaattgcatttttgacccctatcttttcaaaagttg 222  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  20041021 cttaattgcacttttggcccctatcttttcaaaagttg 20040984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 25631085 - 25631126
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  25631085 aggcttaattgcacttttggacccctatcttttcaaaagttg 25631126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 31456175 - 31456134
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  31456175 aggcttaattgcacttttggacccctatcttttcaaaagttg 31456134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 34734387 - 34734346
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  34734387 aggcttaattgcacttttggacccctatcttttcaaaagttg 34734346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 37887671 - 37887712
Alignment:
Q  182 aggcttaattgcatttttgacccc-tatcttttcaaaagttg 222  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  37887671 aggcttaattgcacttttgaccccctatcttttcaaaagttg 37887712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 40687983 - 40687942
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  40687983 aggcttaattgcacttttggacccctatcttttcaaaagttg 40687942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 8339959 - 8339999
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  8339959 ggcttaattgcacttttggacccctatcttttcaaaagttg 8339999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 11350806 - 11350838
Alignment:
Q  181 aaggcttaattgcatttttgacccctatctttt 213  Q
    ||||||||||||||||||| |||||||||||||    
T  11350806 aaggcttaattgcatttttcacccctatctttt 11350838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 26323688 - 26323648
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  26323688 ggcttaattgcacttttggacccctatcttttcaaaagttg 26323648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 32555764 - 32555804
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||||||| ||||||||||||| ||||||||    
T  32555764 ggcttaattgcatttttggacccctatctttttaaaagttg 32555804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 34169101 - 34169061
Alignment:
Q  183 ggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  34169101 ggcttaattgcacttttggacccctatcttttcaaaagttg 34169061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 20593 - 20635
Alignment:
Q  181 aaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  20593 aaggcttaattgcacttttggacccctatcttttcaaaagttg 20635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 9024 - 8983
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  9024 aggcttaattgcatttttggacccctatctttccaaaagttg 8983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 762 - 803
Alignment:
Q  182 aggcttaattgcattttt-gacccctatcttttcaaaagttg 222  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  762 aggcttaattgcatttttagacccctatctttccaaaagttg 803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 79301 - 79260
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  79301 aggcttaattgcacttttggacccctatcttttcaaaagttg 79260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 238621 - 238662
Alignment:
Q  182 aggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  238621 aggcttaattgcacttttggacccctatcttttcaaaagttg 238662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 401027 - 400979
Alignment:
Q  175 ataaacaaggcttaattgcatttttg-acccctatcttttcaaaagttg 222  Q
    ||||| |||||||||||||| ||||| |||||||||||| |||||||||    
T  401027 ataaaaaaggcttaattgcacttttggacccctatctttccaaaagttg 400979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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