View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2821_high_4 (Length: 240)
Name: NF2821_high_4
Description: NF2821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2821_high_4 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 1556732 - 1556972
Alignment:
| Q |
1 |
aatatcaatcatttgttgaccaatgacttaaccaaagttaaattgattagaagaaaggtcttaccatagttaatctcttgataacaaagatgaaaccttt |
100 |
Q |
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| T |
1556732 |
aatatcaatcatttgttgaccaatgacttaaccaaagttaaattgattagaagaaaggtcttaccatagttaatctcttgataacaaagatgaaaccttt |
1556831 |
T |
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| Q |
101 |
attgattggtaaattaaccaaagttaaatttgattagaagaaaggtcttcttactatagttcatcagattagaggaaagg-aaaaaccttagttaaccaa |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |
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| T |
1556832 |
attgattggtaaattaaccaaagttaaatttgattagaagaaaggtcttcttactatagttcatcagattagaggaaaggcaaaaaccttagttaatcaa |
1556931 |
T |
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| Q |
200 |
ttaactaaataatagttaactaaattataagaaaggtctta |
240 |
Q |
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||| ||||||||||||||||||||||||||||||||||||| |
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| T |
1556932 |
ttacctaaataatagttaactaaattataagaaaggtctta |
1556972 |
T |
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