View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2822_low_14 (Length: 220)
Name: NF2822_low_14
Description: NF2822
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2822_low_14 |
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Alignment Details
Target: chr1 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 24999545 - 24999747
Alignment:
| Q |
1 |
aaaacacaaacacataaccttctaattccgaagaagcaaaattaacgaaacaaaattacaaagcaaaatcgaagaacagaaagactaaaacgaagaacac |
100 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24999545 |
aaaacacaaacacataaccttctaattccgaagaagcaaaattaacgaaacaaaattacaaagcaaaatcgaagaacagaaagactaaaacgaagaacac |
24999644 |
T |
|
| Q |
101 |
accggagatctaacaataacggcttcattgacatgatcggcgactttcctagaatcaacagcagcgaaagtatgatactcatcagtcggtgcaaacggtg |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24999645 |
accggagatctaacaataacggcttcattgacatgatcggcgactttcctagaatcaacagcagcgaaagtatgatactcatcagtcggtgcaaacggtg |
24999744 |
T |
|
| Q |
201 |
gct |
203 |
Q |
| |
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||| |
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|
| T |
24999745 |
gct |
24999747 |
T |
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