View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2823_high_2 (Length: 464)
Name: NF2823_high_2
Description: NF2823
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2823_high_2 |
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Alignment Details
Target: chr2 (Bit Score: 416; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 416; E-Value: 0
Query Start/End: Original strand, 20 - 451
Target Start/End: Complemental strand, 6010475 - 6010044
Alignment:
| Q |
20 |
aacatcatccacattttaccttaaaaacaagttaaagcaaatacagaattaagtacaaagtgagatctatattggaaatacctgcaaaattttctgtgca |
119 |
Q |
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| T |
6010475 |
aacatcatccacattttacattaaaaacaagttaaagcaaatacagaattaagtacaaagtgagatctatattggaaatacctgcaaaattttctgtgca |
6010376 |
T |
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| Q |
120 |
gaagcatccccttctgcggaaatgctttctaatctgatggcttgtttcataagcatctcaataagtgttacgatctgaacttctggtactttaactccat |
219 |
Q |
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| T |
6010375 |
gaagcatccccttctgcggaaatgctttctaatctgatggcttgtttcataagcatctcaataagtgttatgatctgaacttctggtactttaactccat |
6010276 |
T |
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| Q |
220 |
cagaaattgatttttcaattgcagatacttgttctgctagctgatcaagttggagagacacattattgatggcacgatttgcagtttggatcttagcatt |
319 |
Q |
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| T |
6010275 |
cagaaattgatttttcaattgcagatacttgttctgctagctgatcaagttggagagacacattatttatggcacgatttgcagtttggatcttagcatt |
6010176 |
T |
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| Q |
320 |
gatacgcatctggatgaaccttctctcaatacttgaagcatcttgaatcaacaccaactttgacttgtctttgactccacatacatccaaatactctcca |
419 |
Q |
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| T |
6010175 |
gatacgcatctggatgaaccttctctcaatacttgaagcatcttgaatcaacaccaactttgacttgtctttgactccacatacatccaaaaactctcca |
6010076 |
T |
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| Q |
420 |
ttttcacgttcttttcctttgtatatcactct |
451 |
Q |
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| T |
6010075 |
ttttcacgttcttttcctttgtatatcactct |
6010044 |
T |
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