View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2823_high_8 (Length: 237)
Name: NF2823_high_8
Description: NF2823
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2823_high_8 |
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Alignment Details
Target: chr5 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 11459831 - 11460051
Alignment:
| Q |
1 |
ctgaaaactatacctgcaacaaagattaagcaacatagagtgataaaaatcaaaactttatggtaaataaattacaaaagagataaaagaagattaccca |
100 |
Q |
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| T |
11459831 |
ctgaaaactatacctgcaacaaagattaagcaacatagagtgataaaaatcaaaactttatggtaaataaattacaaaagagataaaagaagattaccca |
11459930 |
T |
|
| Q |
101 |
agagtataaattctgagaaaaacagcagaatcaagaccagcatgattaataatttcagtctcactcattctcaaagcttgaggcatccaattaagaaaag |
200 |
Q |
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| T |
11459931 |
agagtgtaaattctgagaaaaacagcagaatcaagaccagcatgattaataatttcagtctcactcattctcaaagcttgaggcatccaattaagaaaag |
11460030 |
T |
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| Q |
201 |
tcaaataagtcttgaaattaa |
221 |
Q |
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||||||||||||||||||||| |
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| T |
11460031 |
tcaaataagtcttgaaattaa |
11460051 |
T |
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