View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2824_low_7 (Length: 245)
Name: NF2824_low_7
Description: NF2824
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2824_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 19 - 243
Target Start/End: Original strand, 45216332 - 45216556
Alignment:
| Q |
19 |
ataatggagacttttaatgaaacggttgcgattatctctaataagacctcatcaagagaattatgacacccaacaacatttaacttaaaagacagaacat |
118 |
Q |
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| T |
45216332 |
ataatggagacttttaatgaaacagttgcgattatctctaataagacctcatcaagagaattatgacacccagcaacatttaacttaaaagacagaacat |
45216431 |
T |
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| Q |
119 |
gatgagagtttcaaacaatatgaagctcaacatgttgcttctcaaaatgattacgcgtaagtcaaagaggccgtgagagataaaattaatcataccattg |
218 |
Q |
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| T |
45216432 |
gatgagagtttcaaacaatatgaagctcaacatgttgcttcccaagatgattacgcgtaggtctaagaggtcgtgagagataaaattaatcataccattg |
45216531 |
T |
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| Q |
219 |
agaatgaatgcaaaagtataattaa |
243 |
Q |
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| T |
45216532 |
agaatgaatgcaaaagtataattaa |
45216556 |
T |
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