View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2826-Insertion-6 (Length: 434)

Name: NF2826-Insertion-6
Description: NF2826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2826-Insertion-6
NF2826-Insertion-6
[»] chr1 (1 HSPs)
chr1 (7-434)||(37761877-37762315)


Alignment Details
Target: chr1 (Bit Score: 366; Significance: 0; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 7 - 434
Target Start/End: Complemental strand, 37762315 - 37761877
Alignment:
Q  7 agggtcatgctaattttctctctcttttcaattattatgatgaaactgaatgcttgat-----------cagnnnnnnnnnctaggccattggaattcaa 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           |||         |||||||||||||||||||    
T  37762315 agggtcatgctaattttctctctcttttcaattattatgatgaaactgaatgcttgatgcactctacgccagaaaaaaaaactaggccattggaattcaa 37762216  T
Q  96 atatttaattaatcaaatgaaaattaaatcgcagtcaacagaagaaaagaaaattaattagttgagaaaagataactttgaatttgaatctgaatctatt 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37762215 atatttaattaatcaaatgaaaattaaatcgcagtcaacagaagaaaagaaaattaattagttaagaaaagataactttgaatttgaatctgaatctatt 37762116  T
Q  196 cactgtttagtacccttttcgtgaaaacaagttattgtattttctaagcttctttatgatattgtagtttatttttatatttttgcatacatggttgatt 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  37762115 cactgtttagtacccttttcgtgaaaacaagttattgtattttctaagcttctttatgatattgtagtttatttttatatttttgcatacatggttgaat 37762016  T
Q  296 tgtaattaaattaaatgcacaactaccatatgtagggaatgaagtatataattcaaatgctttcatttcaaggactttgatccctggtccataggatctg 395  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37762015 tgtaattaaattaaatgcacaactaccatatgtagggaatgaagtatataattcaaatgctttcatttcaaggactttgatccctggtccataggatctg 37761916  T
Q  396 agtttgatgtttacataacataagaggataagtttcatt 434  Q
    |||||||||||||||||||||||||||||||||||||||    
T  37761915 agtttgatgtttacataacataagaggataagtttcatt 37761877  T

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