View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2826-Insertion-7 (Length: 431)
Name: NF2826-Insertion-7
Description: NF2826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2826-Insertion-7 |
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Alignment Details
Target: chr4 (Bit Score: 254; Significance: 1e-141; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 92 - 393
Target Start/End: Original strand, 52560278 - 52560586
Alignment:
| Q |
92 |
aatatggttgatccac-gggatgccctaatcatctgacataatcataggataaaacatttagagaatgaaaatgttttaactatcattgaa------tat |
184 |
Q |
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| T |
52560278 |
aatatggttgatccaccgggatgccctaatcatctgacataatcataggataaaacatttagagaatgaaaatgttttaactatcatagaaatagaatat |
52560377 |
T |
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| Q |
185 |
aaacatacagagaatgaaaaaggctaaatcaccataggataaaagtttatagaaaactaaaattcttaacaaatcataggatagacaaatatagagaacg |
284 |
Q |
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| T |
52560378 |
aaacatatagagaatgaaaaatgctaaatcaccataggataaaagtttatagaaaactaaaatgcttaacaaatcataggatagacaaatatagagaacg |
52560477 |
T |
|
| Q |
285 |
aatagactaaacaaccatatgatggaaacataaagagaatgagaatgtttaacaaccattggaaagaaacagaataaaataaatacttaccatagcgtag |
384 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52560478 |
aatagactaaacaaccatatgatggaaacataaagagaatgagaatgtttagctaccattggaaagaaacagaataaaataaatacttaccatagcgtag |
52560577 |
T |
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| Q |
385 |
aatcatacc |
393 |
Q |
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||||||||| |
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| T |
52560578 |
aatcatacc |
52560586 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 52560064 - 52560144
Alignment:
| Q |
7 |
accaagacctcaaatcttgggctatcaaatgtcaa--ttttggctaacaaaattttatcaacaagggtagaagcacaaaga |
85 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52560064 |
accaagacctcaaatcttgggctatcaaatgtcaaaattttggctaacaaaattttatcaacaagggtagaagcacaaaga |
52560144 |
T |
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