View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2826_high_12 (Length: 392)
Name: NF2826_high_12
Description: NF2826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2826_high_12 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 372; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 13 - 392
Target Start/End: Complemental strand, 34078781 - 34078402
Alignment:
| Q |
13 |
aatattagtctcaaaaatcattcgagataggcatataggaaaatctccatctttgcataagaaaaataaccttcctcctggcccaccaaggtggcctatt |
112 |
Q |
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| T |
34078781 |
aatattagtctcaaaaatcattcgagataggcatataggaaaatctccatctttggataagaaaaataaccttcctcctggcccaccaaggtggcctatt |
34078682 |
T |
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| Q |
113 |
gttggtaaccttctccaattagggcaacttcctcatagagacttagcatcattatgtgataaatatggacccttagtttatttaaaattaggaaatattg |
212 |
Q |
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| T |
34078681 |
gttggtaaccttctccaattagggcaacttcctcatagagacttagcatcattatgcgataaatatggacccttagtttatttaaaattaggaaatattg |
34078582 |
T |
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| Q |
213 |
atgctattactactaatgaccctgatattatacgtgaaatacttctttctcaagatgatgtttttgcctctcgtccacgcactcttgctgcaattcattt |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34078581 |
atgctattactactaatgaccctgatattatacgtgaaatacttctttctcaagatgatgtttttgcctctcgtccacgcactcttgctgcaattcattt |
34078482 |
T |
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| Q |
313 |
agcatatgggtgtggtgatgttgcattggcaccattaggacctcattggaagcgaatgagaagaatttgcatggaacact |
392 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34078481 |
agcatatgggtgtggtgatgttgcattggcaccattaggacctcattggaagcgaatgagaagaatttgcatggaacact |
34078402 |
T |
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