View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2826_high_4 (Length: 562)
Name: NF2826_high_4
Description: NF2826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2826_high_4 |
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Alignment Details
Target: chr1 (Bit Score: 179; Significance: 2e-96; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 11 - 245
Target Start/End: Original strand, 26642500 - 26642734
Alignment:
| Q |
11 |
taattctggatcataaaaggattcttacattaggcgggataggttcctgtgatgtgttctgatacccaagtgatggaggtatgacgactctacgaatacc |
110 |
Q |
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| T |
26642500 |
taattctggatcataaaaggattcttacattaggtgggataggttcctgtgatgtgttctgatacccaagtgatggaggtatgacgactctacgaatacc |
26642599 |
T |
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| Q |
111 |
accgactttcattgatctcactgcgacatcaattccagcaattacctgaacacaaacatttcattctcatataattaacttctttcttagtatgac--at |
208 |
Q |
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| T |
26642600 |
accgactttcattgatcgcactgccacatcaattccagcaattacctgaacac--acatttctttctcatatgattaacttctttataagtatgacatat |
26642697 |
T |
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| Q |
209 |
gataaaggcatgggaattaatttaattacaacttttc |
245 |
Q |
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| T |
26642698 |
gataaaggcatagaaattaatttaattacaacttttc |
26642734 |
T |
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