View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2826_low_1 (Length: 790)

Name: NF2826_low_1
Description: NF2826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2826_low_1
NF2826_low_1
[»] chr4 (92 HSPs)
chr4 (18-607)||(56474530-56475105)
chr4 (331-481)||(53801647-53801799)
chr4 (680-786)||(56474351-56474457)
chr4 (331-481)||(26732254-26732408)
chr4 (331-481)||(29175256-29175408)
chr4 (331-481)||(42853606-42853760)
chr4 (397-481)||(56363933-56364017)
chr4 (333-477)||(27050978-27051126)
chr4 (395-481)||(34616658-34616744)
chr4 (395-481)||(38382418-38382504)
chr4 (395-481)||(47181938-47182024)
chr4 (395-481)||(48402085-48402171)
chr4 (331-481)||(37297078-37297231)
chr4 (335-481)||(2575678-2575826)
chr4 (358-478)||(19473847-19473971)
chr4 (331-478)||(10250406-10250557)
chr4 (336-481)||(26724860-26725006)
chr4 (331-481)||(23369220-23369374)
chr4 (331-453)||(39478464-39478592)
chr4 (300-481)||(7632349-7632534)
chr4 (336-481)||(51986076-51986225)
chr4 (331-473)||(3316380-3316529)
chr4 (333-452)||(40348825-40348948)
chr4 (297-481)||(50721632-50721820)
chr4 (336-450)||(29891879-29891997)
chr4 (331-481)||(43175013-43175167)
chr4 (378-478)||(24575742-24575842)
chr4 (336-487)||(1627437-1627595)
chr4 (331-439)||(2268437-2268549)
chr4 (378-481)||(39654904-39655007)
chr4 (333-481)||(44539767-44539917)
chr4 (331-477)||(37997285-37997433)
chr4 (358-481)||(39195113-39195240)
chr4 (385-450)||(31995834-31995899)
chr4 (331-473)||(38134382-38134528)
chr4 (331-487)||(27371170-27371330)
chr4 (387-481)||(515533-515627)
chr4 (331-481)||(5622487-5622641)
chr4 (331-481)||(26492038-26492190)
chr4 (331-481)||(50831643-50831797)
chr4 (336-481)||(31641453-31641602)
chr4 (333-486)||(46213001-46213158)
chr4 (301-425)||(149428-149556)
chr4 (331-482)||(39440513-39440668)
chr4 (358-439)||(19165362-19165443)
chr4 (337-439)||(29531536-29531642)
chr4 (331-481)||(36177935-36178089)
chr4 (331-452)||(37060347-37060469)
chr4 (339-477)||(53796693-53796835)
chr4 (336-477)||(6520725-6520868)
chr4 (385-481)||(15175633-15175729)
chr4 (331-428)||(31468929-31469030)
chr4 (331-480)||(40693513-40693664)
chr4 (385-481)||(42491161-42491257)
chr4 (358-427)||(52223239-52223310)
chr4 (418-481)||(5233558-5233621)
chr4 (336-452)||(38380993-38381113)
chr4 (336-427)||(46767884-46767978)
chr4 (411-481)||(38376378-38376448)
chr4 (331-481)||(336695-336849)
chr4 (352-478)||(11068738-11068868)
chr4 (331-480)||(25221613-25221764)
chr4 (352-466)||(27354257-27354375)
chr4 (336-481)||(27965021-27965168)
chr4 (385-440)||(49449092-49449147)
chr4 (337-412)||(5249904-5249983)
chr4 (391-449)||(32130159-32130217)
chr4 (372-478)||(42395928-42396034)
chr4 (378-487)||(12595512-12595621)
chr4 (336-453)||(24990148-24990270)
chr4 (292-427)||(31559529-31559668)
chr4 (345-410)||(45796422-45796487)
chr4 (331-481)||(50889961-50890115)
chr4 (331-481)||(52430907-52431061)
chr4 (331-452)||(56557763-56557885)
chr4 (379-427)||(12387607-12387655)
chr4 (331-428)||(31574880-31574981)
chr4 (402-442)||(39447851-39447891)
chr4 (331-379)||(44257723-44257771)
chr4 (422-478)||(49449036-49449092)
chr4 (336-379)||(17367111-17367154)
chr4 (415-481)||(47744400-47744467)
chr4 (379-477)||(11672015-11672113)
chr4 (337-383)||(26440700-26440746)
chr4 (331-438)||(47288112-47288223)
chr4 (341-383)||(48722108-48722150)
chr4 (331-377)||(52895257-52895303)
chr4 (336-410)||(18568405-18568483)
chr4 (407-452)||(19174691-19174736)
chr4 (341-439)||(50608554-50608656)
chr4 (342-383)||(52456917-52456958)
chr4 (336-377)||(52911785-52911826)
[»] chr6 (44 HSPs)
chr6 (343-481)||(26595390-26595532)
chr6 (293-488)||(2241907-2242101)
chr6 (331-481)||(22079451-22079605)
chr6 (300-481)||(17551267-17551451)
chr6 (395-481)||(16199547-16199633)
chr6 (331-481)||(5694039-5694193)
chr6 (331-481)||(14817961-14818115)
chr6 (379-481)||(4820448-4820550)
chr6 (358-481)||(32316816-32316943)
chr6 (339-481)||(552830-552976)
chr6 (378-476)||(18737460-18737558)
chr6 (331-481)||(34047416-34047570)
chr6 (378-481)||(30457585-30457688)
chr6 (336-481)||(31077827-31077977)
chr6 (331-436)||(5080500-5080609)
chr6 (385-469)||(11014890-11014974)
chr6 (337-481)||(15974643-15974791)
chr6 (331-470)||(3853206-3853349)
chr6 (341-480)||(11612227-11612370)
chr6 (356-481)||(33430250-33430373)
chr6 (396-481)||(33603168-33603253)
chr6 (331-478)||(6271380-6271527)
chr6 (379-481)||(277072-277174)
chr6 (333-481)||(21968782-21968931)
chr6 (331-481)||(31883191-31883345)
chr6 (331-428)||(13422998-13423099)
chr6 (378-481)||(24900854-24900957)
chr6 (404-478)||(30423443-30423517)
chr6 (396-481)||(13689882-13689967)
chr6 (301-481)||(17181823-17182007)
chr6 (385-481)||(34048626-34048722)
chr6 (336-481)||(2060521-2060670)
chr6 (331-377)||(5570329-5570375)
chr6 (352-450)||(34851541-34851639)
chr6 (331-481)||(1156750-1156903)
chr6 (331-452)||(2688982-2689105)
chr6 (378-491)||(20998023-20998136)
chr6 (331-379)||(1376394-1376442)
chr6 (331-379)||(1384142-1384190)
chr6 (331-439)||(8098527-8098637)
chr6 (392-427)||(19367630-19367665)
chr6 (333-452)||(5522556-5522677)
chr6 (342-383)||(11742972-11743013)
chr6 (415-476)||(33657006-33657067)
[»] chr7 (65 HSPs)
chr7 (331-481)||(40417805-40417957)
chr7 (395-481)||(46022155-46022241)
chr7 (331-481)||(48062086-48062240)
chr7 (336-481)||(3937011-3937158)
chr7 (395-481)||(7701641-7701727)
chr7 (300-478)||(42552898-42553078)
chr7 (379-481)||(25192805-25192907)
chr7 (333-448)||(41189464-41189583)
chr7 (331-481)||(43025369-43025523)
chr7 (352-481)||(38956506-38956639)
chr7 (299-476)||(44649221-44649399)
chr7 (352-463)||(22925190-22925303)
chr7 (396-481)||(35072250-35072335)
chr7 (358-446)||(30064497-30064587)
chr7 (331-422)||(34108805-34108896)
chr7 (359-463)||(41863535-41863641)
chr7 (331-477)||(20337340-20337490)
chr7 (358-481)||(35627908-35628035)
chr7 (412-481)||(3614334-3614403)
chr7 (331-481)||(31445347-31445501)
chr7 (396-481)||(35098591-35098676)
chr7 (331-481)||(41018693-41018847)
chr7 (331-481)||(44895460-44895614)
chr7 (343-481)||(41989628-41989772)
chr7 (378-481)||(22918057-22918160)
chr7 (333-481)||(24614204-24614356)
chr7 (397-479)||(32803788-32803870)
chr7 (364-490)||(33578195-33578323)
chr7 (385-481)||(9428503-9428599)
chr7 (331-427)||(38340323-38340424)
chr7 (345-481)||(46094994-46095136)
chr7 (336-480)||(32529745-32529891)
chr7 (358-481)||(1284472-1284597)
chr7 (333-379)||(24532936-24532982)
chr7 (414-480)||(38944913-38944979)
chr7 (301-481)||(43159463-43159646)
chr7 (402-478)||(35207605-35207679)
chr7 (378-439)||(38073300-38073361)
chr7 (336-422)||(38259098-38259186)
chr7 (335-445)||(38347577-38347691)
chr7 (331-481)||(40112842-40112996)
chr7 (331-483)||(27568047-27568206)
chr7 (331-428)||(41430092-41430193)
chr7 (409-481)||(43942743-43942815)
chr7 (337-409)||(31274500-31274576)
chr7 (331-439)||(38861125-38861237)
chr7 (333-379)||(18111605-18111651)
chr7 (333-379)||(38939973-38940019)
chr7 (301-379)||(34978296-34978374)
chr7 (345-450)||(36207081-36207188)
chr7 (397-481)||(39110963-39111046)
chr7 (331-383)||(40507159-40507210)
chr7 (331-379)||(40854648-40854696)
chr7 (331-370)||(5174554-5174593)
chr7 (385-448)||(11325988-11326051)
chr7 (336-383)||(34264617-34264664)
chr7 (336-448)||(44189231-44189347)
chr7 (395-481)||(17002434-17002519)
chr7 (300-379)||(47448825-47448904)
chr7 (331-376)||(6269396-6269441)
chr7 (301-383)||(27383913-27383994)
chr7 (392-481)||(28030970-28031057)
chr7 (352-410)||(41650758-41650818)
chr7 (385-426)||(47145036-47145077)
chr7 (331-481)||(47356013-47356167)
[»] chr1 (87 HSPs)
chr1 (331-481)||(31826980-31827134)
chr1 (299-481)||(9566848-9567034)
chr1 (331-481)||(18434824-18434978)
chr1 (301-481)||(19947632-19947812)
chr1 (301-481)||(649768-649952)
chr1 (334-481)||(18512231-18512382)
chr1 (336-475)||(50932340-50932481)
chr1 (331-481)||(19055647-19055801)
chr1 (331-481)||(27464945-27465099)
chr1 (336-481)||(31088215-31088364)
chr1 (337-482)||(48470674-48470823)
chr1 (331-480)||(49065253-49065405)
chr1 (396-486)||(2571733-2571824)
chr1 (390-481)||(21401490-21401581)
chr1 (336-475)||(3851192-3851335)
chr1 (334-481)||(26469391-26469542)
chr1 (395-481)||(46907292-46907378)
chr1 (331-481)||(33100837-33100991)
chr1 (331-481)||(50775044-50775198)
chr1 (331-450)||(23645440-23645563)
chr1 (336-439)||(27533414-27533521)
chr1 (396-481)||(48103250-48103336)
chr1 (331-481)||(8350087-8350238)
chr1 (331-481)||(30735181-30735335)
chr1 (336-480)||(30570562-30570706)
chr1 (378-481)||(3981914-3982017)
chr1 (331-433)||(6693190-6693292)
chr1 (343-450)||(14983814-14983925)
chr1 (300-477)||(35369699-35369879)
chr1 (337-452)||(43775241-43775360)
chr1 (331-481)||(44519039-44519193)
chr1 (397-481)||(26207940-26208024)
chr1 (336-481)||(37274921-37275070)
chr1 (336-481)||(37619578-37619727)
chr1 (295-480)||(9987945-9988134)
chr1 (300-481)||(44914459-44914644)
chr1 (336-439)||(29359673-29359778)
chr1 (331-486)||(37685360-37685517)
chr1 (331-486)||(37700001-37700158)
chr1 (331-486)||(50148976-50149134)
chr1 (355-481)||(2269460-2269590)
chr1 (331-452)||(51436687-51436813)
chr1 (342-477)||(31433531-31433669)
chr1 (336-453)||(47398368-47398488)
chr1 (385-481)||(51571234-51571330)
chr1 (331-452)||(52576219-52576344)
chr1 (333-481)||(25672373-25672525)
chr1 (402-481)||(30467421-30467500)
chr1 (378-481)||(45121369-45121471)
chr1 (378-481)||(50726136-50726239)
chr1 (333-428)||(8846005-8846104)
chr1 (358-481)||(48261196-48261323)
chr1 (333-475)||(6809613-6809757)
chr1 (331-439)||(740883-740997)
chr1 (333-481)||(10627698-10627849)
chr1 (333-477)||(40861154-40861300)
chr1 (331-439)||(49020335-49020445)
chr1 (378-481)||(49647039-49647141)
chr1 (331-438)||(15082981-15083092)
chr1 (379-481)||(45640383-45640484)
chr1 (333-451)||(50824773-50824894)
chr1 (334-486)||(51718513-51718665)
chr1 (378-481)||(8828012-8828112)
chr1 (402-475)||(26020970-26021043)
chr1 (420-481)||(40328657-40328718)
chr1 (331-452)||(21433317-21433442)
chr1 (378-478)||(45333791-45333891)
chr1 (337-477)||(11597672-11597816)
chr1 (331-438)||(3159405-3159516)
chr1 (300-379)||(30535990-30536069)
chr1 (300-439)||(12657221-12657364)
chr1 (300-427)||(37516523-37516652)
chr1 (395-435)||(24981501-24981541)
chr1 (385-425)||(25509123-25509163)
chr1 (365-473)||(32915330-32915438)
chr1 (337-452)||(29154816-29154932)
chr1 (336-440)||(30745021-30745129)
chr1 (336-440)||(30766472-30766580)
chr1 (336-409)||(30772635-30772710)
chr1 (333-379)||(40328734-40328780)
chr1 (337-379)||(50153971-50154013)
chr1 (391-433)||(51137587-51137629)
chr1 (333-379)||(52437526-52437572)
chr1 (336-377)||(16836111-16836152)
chr1 (378-439)||(29877378-29877439)
chr1 (341-442)||(36954697-36954801)
chr1 (402-435)||(37186950-37186983)
[»] chr3 (81 HSPs)
chr3 (333-481)||(37056945-37057097)
chr3 (331-482)||(26014841-26014996)
chr3 (331-481)||(13348022-13348176)
chr3 (331-481)||(35376969-35377123)
chr3 (331-483)||(47472358-47472514)
chr3 (395-481)||(21217609-21217695)
chr3 (395-480)||(23592555-23592640)
chr3 (331-481)||(27541390-27541544)
chr3 (331-481)||(46623936-46624090)
chr3 (331-452)||(45711356-45711481)
chr3 (337-481)||(38926663-38926811)
chr3 (331-478)||(42358529-42358680)
chr3 (331-481)||(5114107-5114261)
chr3 (331-481)||(36670902-36671056)
chr3 (396-481)||(44383287-44383372)
chr3 (331-452)||(35597191-35597316)
chr3 (331-482)||(42356971-42357122)
chr3 (331-477)||(5244258-5244408)
chr3 (331-481)||(16969454-16969608)
chr3 (343-487)||(25641465-25641600)
chr3 (298-452)||(20547907-20548064)
chr3 (385-480)||(35201323-35201418)
chr3 (331-439)||(44413852-44413962)
chr3 (378-481)||(51982179-51982282)
chr3 (331-486)||(6178308-6178467)
chr3 (331-478)||(7668079-7668229)
chr3 (407-480)||(23600702-23600775)
chr3 (395-481)||(42889082-42889168)
chr3 (331-481)||(52326048-52326202)
chr3 (385-481)||(32924169-32924265)
chr3 (333-481)||(33939267-33939421)
chr3 (331-439)||(41505520-41505632)
chr3 (358-482)||(44413282-44413410)
chr3 (296-481)||(52939648-52939834)
chr3 (333-480)||(28539629-28539780)
chr3 (331-477)||(11630642-11630790)
chr3 (352-481)||(19149040-19149173)
chr3 (333-481)||(31157565-31157717)
chr3 (333-481)||(37503635-37503787)
chr3 (341-481)||(55361121-55361265)
chr3 (333-478)||(8847141-8847289)
chr3 (378-480)||(24256660-24256762)
chr3 (331-481)||(37302575-37302729)
chr3 (331-481)||(52254026-52254180)
chr3 (336-481)||(288760-288909)
chr3 (358-439)||(33791700-33791785)
chr3 (331-480)||(50559101-50559253)
chr3 (378-481)||(41309197-41309300)
chr3 (386-453)||(49087024-49087090)
chr3 (331-481)||(55151605-55151758)
chr3 (331-429)||(1795985-1796087)
chr3 (331-481)||(7934004-7934157)
chr3 (408-481)||(13735840-13735913)
chr3 (331-481)||(44813163-44813319)
chr3 (331-481)||(44855982-44856136)
chr3 (297-435)||(45000060-45000200)
chr3 (331-436)||(39629771-39629880)
chr3 (333-452)||(19960551-19960672)
chr3 (404-479)||(44463463-44463538)
chr3 (379-477)||(42997366-42997464)
chr3 (387-483)||(14226591-14226687)
chr3 (335-481)||(39630505-39630655)
chr3 (299-452)||(10811133-10811289)
chr3 (331-439)||(29916957-29917065)
chr3 (331-439)||(29966110-29966218)
chr3 (339-477)||(27511762-27511903)
chr3 (391-452)||(46965835-46965896)
chr3 (337-450)||(9311076-9311193)
chr3 (385-481)||(49780628-49780724)
chr3 (337-477)||(12762581-12762725)
chr3 (406-481)||(44445402-44445477)
chr3 (342-477)||(50314665-50314808)
chr3 (352-439)||(1436867-1436958)
chr3 (336-407)||(9753253-9753328)
chr3 (385-479)||(11056823-11056922)
chr3 (358-473)||(32587693-32587810)
chr3 (333-379)||(42672828-42672874)
chr3 (331-377)||(43720411-43720457)
chr3 (367-450)||(46574324-46574409)
chr3 (391-477)||(46965901-46965987)
chr3 (300-431)||(41443128-41443263)
[»] chr8 (60 HSPs)
chr8 (337-481)||(11253430-11253578)
chr8 (301-481)||(7598708-7598891)
chr8 (378-481)||(29025340-29025443)
chr8 (331-481)||(34186636-34186790)
chr8 (336-481)||(37133750-37133899)
chr8 (331-481)||(22719469-22719623)
chr8 (341-481)||(5740673-5740817)
chr8 (331-485)||(32133357-32133510)
chr8 (337-481)||(42768241-42768387)
chr8 (331-481)||(7271881-7272033)
chr8 (336-481)||(12898817-12898966)
chr8 (336-481)||(23754594-23754743)
chr8 (335-436)||(24503158-24503261)
chr8 (332-481)||(34639563-34639716)
chr8 (340-475)||(5277393-5277532)
chr8 (333-480)||(36660339-36660490)
chr8 (331-478)||(36816507-36816658)
chr8 (331-481)||(27325787-27325941)
chr8 (331-439)||(31249454-31249566)
chr8 (343-478)||(32501087-32501226)
chr8 (358-476)||(27854661-27854781)
chr8 (331-477)||(43397810-43397960)
chr8 (331-481)||(10839370-10839523)
chr8 (331-452)||(21526197-21526322)
chr8 (378-481)||(4054174-4054277)
chr8 (358-453)||(43632254-43632351)
chr8 (378-487)||(13106560-13106669)
chr8 (331-481)||(37449313-37449467)
chr8 (333-481)||(10902736-10902882)
chr8 (331-439)||(12734941-12735053)
chr8 (331-452)||(37942825-37942948)
chr8 (331-379)||(7777173-7777221)
chr8 (331-379)||(42786653-42786701)
chr8 (331-453)||(7535711-7535834)
chr8 (331-439)||(10731575-10731687)
chr8 (402-481)||(24479327-24479406)
chr8 (337-409)||(43419903-43419979)
chr8 (414-473)||(44415808-44415867)
chr8 (336-430)||(6511800-6511896)
chr8 (385-473)||(34796471-34796557)
chr8 (331-379)||(7795298-7795346)
chr8 (333-377)||(28756567-28756611)
chr8 (336-452)||(39211076-39211195)
chr8 (331-439)||(6440111-6440223)
chr8 (331-410)||(7603626-7603705)
chr8 (331-439)||(35067190-35067302)
chr8 (336-428)||(43285903-43285999)
chr8 (407-473)||(3381467-3381532)
chr8 (341-383)||(7559357-7559399)
chr8 (337-383)||(7678767-7678813)
chr8 (341-383)||(9048306-9048348)
chr8 (333-379)||(10692470-10692516)
chr8 (333-440)||(28756693-28756803)
chr8 (397-475)||(36251425-36251503)
chr8 (331-377)||(36786802-36786848)
chr8 (333-379)||(38708289-38708335)
chr8 (378-439)||(2883268-2883329)
chr8 (416-481)||(36969562-36969627)
chr8 (372-481)||(39856112-39856221)
chr8 (292-362)||(42733575-42733645)
[»] chr5 (61 HSPs)
chr5 (331-481)||(7287077-7287231)
chr5 (331-481)||(7552855-7553007)
chr5 (395-481)||(17626083-17626169)
chr5 (335-481)||(39591713-39591863)
chr5 (335-481)||(39592105-39592255)
chr5 (333-481)||(1671573-1671725)
chr5 (331-478)||(13309912-13310063)
chr5 (331-481)||(28306020-28306174)
chr5 (331-481)||(33037549-33037703)
chr5 (378-481)||(22972197-22972300)
chr5 (331-481)||(5168212-5168366)
chr5 (333-481)||(14051203-14051356)
chr5 (331-481)||(26791132-26791286)
chr5 (331-481)||(41321284-41321438)
chr5 (333-452)||(7076485-7076608)
chr5 (338-481)||(36738984-36739131)
chr5 (404-481)||(3565190-3565267)
chr5 (331-481)||(15479498-15479652)
chr5 (339-480)||(1764261-1764406)
chr5 (340-481)||(18258681-18258826)
chr5 (331-481)||(35634723-35634878)
chr5 (300-473)||(27487886-27488062)
chr5 (331-481)||(1274387-1274540)
chr5 (333-478)||(2972354-2972504)
chr5 (331-417)||(22649613-22649703)
chr5 (333-479)||(39054618-39054768)
chr5 (331-432)||(1079889-1079994)
chr5 (385-481)||(8686978-8687074)
chr5 (336-481)||(19844198-19844345)
chr5 (336-481)||(28467341-28467490)
chr5 (331-477)||(24405847-24405996)
chr5 (300-477)||(27546062-27546245)
chr5 (352-427)||(6596383-6596460)
chr5 (300-452)||(33958176-33958332)
chr5 (352-439)||(35646433-35646524)
chr5 (333-481)||(34546448-34546599)
chr5 (342-427)||(20270611-20270698)
chr5 (378-481)||(14923153-14923256)
chr5 (368-452)||(21353212-21353298)
chr5 (331-438)||(18660788-18660899)
chr5 (336-439)||(19952034-19952141)
chr5 (344-481)||(33655301-33655443)
chr5 (331-428)||(6758731-6758832)
chr5 (333-477)||(35567532-35567679)
chr5 (333-379)||(32510826-32510872)
chr5 (333-379)||(40829446-40829492)
chr5 (331-481)||(4719680-4719834)
chr5 (331-438)||(5721746-5721859)
chr5 (347-481)||(21943584-21943721)
chr5 (365-452)||(2429074-2429161)
chr5 (333-473)||(33598994-33599137)
chr5 (333-379)||(3935261-3935306)
chr5 (300-379)||(11148510-11148589)
chr5 (333-379)||(14532536-14532582)
chr5 (300-375)||(19839983-19840058)
chr5 (301-481)||(21155987-21156171)
chr5 (331-429)||(9168106-9168206)
chr5 (411-452)||(13168635-13168676)
chr5 (342-383)||(35778828-35778869)
chr5 (334-383)||(35972606-35972655)
chr5 (296-378)||(38293353-38293435)
[»] chr2 (79 HSPs)
chr2 (395-480)||(41056636-41056721)
chr2 (298-480)||(9207587-9207772)
chr2 (395-481)||(13333058-13333144)
chr2 (395-481)||(25270470-25270556)
chr2 (335-481)||(9760051-9760201)
chr2 (331-481)||(18254097-18254251)
chr2 (331-481)||(27490618-27490772)
chr2 (331-481)||(41195613-41195767)
chr2 (395-481)||(3097749-3097835)
chr2 (396-481)||(2076667-2076752)
chr2 (331-481)||(8848585-8848737)
chr2 (331-477)||(19642627-19642777)
chr2 (331-481)||(22888705-22888863)
chr2 (336-486)||(32477366-32477520)
chr2 (331-481)||(41042283-41042437)
chr2 (333-481)||(43487410-43487562)
chr2 (331-481)||(9194270-9194424)
chr2 (331-481)||(42421786-42421940)
chr2 (331-481)||(44977387-44977541)
chr2 (334-478)||(6049236-6049383)
chr2 (333-438)||(33273518-33273625)
chr2 (341-478)||(42091393-42091536)
chr2 (331-481)||(3838768-3838922)
chr2 (331-481)||(9990720-9990874)
chr2 (335-453)||(29879571-29879693)
chr2 (331-481)||(23690396-23690551)
chr2 (360-480)||(28494918-28495042)
chr2 (331-477)||(39147795-39147945)
chr2 (300-481)||(1352387-1352572)
chr2 (333-481)||(1907651-1907803)
chr2 (343-491)||(9647173-9647325)
chr2 (378-481)||(37737859-37737962)
chr2 (331-439)||(44287372-44287482)
chr2 (341-427)||(33583164-33583254)
chr2 (331-452)||(42430679-42430804)
chr2 (356-481)||(44654680-44654807)
chr2 (296-481)||(7258449-7258638)
chr2 (336-480)||(29349540-29349688)
chr2 (426-481)||(42434247-42434302)
chr2 (331-451)||(44050045-44050168)
chr2 (379-481)||(1248767-1248869)
chr2 (331-481)||(5054060-5054212)
chr2 (333-452)||(34945007-34945130)
chr2 (331-477)||(14255332-14255482)
chr2 (336-424)||(17569651-17569740)
chr2 (333-478)||(5427113-5427262)
chr2 (331-375)||(14499021-14499065)
chr2 (336-481)||(18846645-18846794)
chr2 (331-439)||(6511280-6511392)
chr2 (378-481)||(7663955-7664057)
chr2 (300-452)||(38821365-38821518)
chr2 (333-379)||(4657333-4657379)
chr2 (411-481)||(16973649-16973719)
chr2 (336-439)||(22416247-22416354)
chr2 (420-481)||(21611543-21611604)
chr2 (331-375)||(14500889-14500933)
chr2 (332-409)||(16740168-16740249)
chr2 (395-486)||(19633379-19633471)
chr2 (395-486)||(19830280-19830372)
chr2 (385-481)||(32628270-32628366)
chr2 (336-480)||(34215299-34215445)
chr2 (420-481)||(136049-136107)
chr2 (333-481)||(7698202-7698354)
chr2 (343-439)||(10060366-10060464)
chr2 (331-370)||(34431829-34431868)
chr2 (379-481)||(43075964-43076066)
chr2 (415-477)||(3412446-3412508)
chr2 (396-446)||(7502333-7502383)
chr2 (379-481)||(17767932-17768034)
chr2 (333-379)||(21738609-21738655)
chr2 (341-438)||(39430693-39430793)
chr2 (435-481)||(42340643-42340689)
chr2 (299-370)||(43057062-43057133)
chr2 (331-389)||(45259268-45259326)
chr2 (331-449)||(8427582-8427704)
chr2 (404-477)||(9521914-9521987)
chr2 (301-379)||(10833639-10833717)
chr2 (395-448)||(31415007-31415060)
chr2 (396-453)||(34852217-34852274)
[»] scaffold0519 (1 HSPs)
scaffold0519 (337-481)||(11816-11965)
[»] scaffold0087 (1 HSPs)
scaffold0087 (358-481)||(53249-53376)
[»] scaffold0056 (1 HSPs)
scaffold0056 (333-481)||(76507-76659)
[»] scaffold0199 (1 HSPs)
scaffold0199 (331-481)||(8697-8851)
[»] scaffold0184 (1 HSPs)
scaffold0184 (337-481)||(16677-16823)
[»] scaffold0078 (1 HSPs)
scaffold0078 (337-481)||(56021-56167)
[»] scaffold0098 (1 HSPs)
scaffold0098 (336-481)||(49329-49478)
[»] scaffold0067 (1 HSPs)
scaffold0067 (378-439)||(35603-35664)
[»] scaffold0013 (1 HSPs)
scaffold0013 (331-427)||(89989-90087)
[»] scaffold0041 (1 HSPs)
scaffold0041 (333-439)||(10893-11003)
[»] scaffold0174 (1 HSPs)
scaffold0174 (331-379)||(34787-34835)
[»] scaffold0053 (1 HSPs)
scaffold0053 (331-379)||(12527-12575)
[»] scaffold0687 (1 HSPs)
scaffold0687 (331-410)||(1308-1387)
[»] scaffold0508 (1 HSPs)
scaffold0508 (341-383)||(11526-11568)
[»] scaffold0432 (1 HSPs)
scaffold0432 (293-368)||(6524-6599)


Alignment Details
Target: chr4 (Bit Score: 445; Significance: 0; HSPs: 92)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 445; E-Value: 0
Query Start/End: Original strand, 18 - 607
Target Start/End: Complemental strand, 56475105 - 56474530
Alignment:
Q  18 ggatgtggatggaggtaagggaaaaagaatgaagtacaaagaggtagagaaaatgtgaaggagatggaagatgacaaaagggatgataaatttacatatt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  56475105 ggatgtggatggaggtaagggaaaaagaatgaagtacaaagaggtagagaaaatgtgaaggagatggaagatgacaaaagggctgataaatttacgtatt 56475006  T
Q  118 tgtcttttccattgcattgaaatgacaaagctacccatttgtcaagtatatgtctcaaattatgtgtttcaatgacacaatcgagtctagcgcaatgtta 217  Q
    |||||||| |||||||||||             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56475005 tgtctttttcattgcattga-------------cccatttgtcaagtatatgtctcaaattatgtgtttcaatgacacaatcgagtctagcgcaatgtta 56474919  T
Q  218 ttcagacacgcattttttacatagaaacgagataccatattttactgttcacgctttattacatggttaccacaatttaaatagagaaatgatattttaa 317  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  56474918 ttcagacacgcatttttgacatagaaacgagataccatattttactattcacgctttattacatggttaccacaatttaaatagagaaatgatatttgaa 56474819  T
Q  318 caatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttactctctatattgttttagtttttatgtcaatacctcattt 417  Q
    ||||||       |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||    
T  56474818 caatcatttttttacaatttttgtgacaattttctctcttatactcacattatgtttttactctctctattgttttggtttttgtgtcaatacctcattt 56474719  T
Q  418 tctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactcgtttaaatatatggccaaaagtgaagacgtgacatc 517  Q
    |||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||   |||||||||||| |||||||||||||||||||||    
T  56474718 tctttgtaaagttttggttgtctcaaaaattgttatgtgaatagatgttcaaataacacaact-tattaaatatatggtcaaaagtgaagacgtgacatc 56474620  T
Q  518 tgatgacatatgactgggcaaaagggaagacgtgacatgctgactgggatttgactgtatataattgatgacattgcacaatgagttggc 607  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56474619 tgatgacatatgactgtgcaaaagggaagacgtgatatgctgactgggatttgactgtatataattgatgacattgcacaatgagttggc 56474530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 53801799 - 53801647
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||| ||||||||||| ||| | | | ||||||||||||| ||||||||  |||| ||||| |||||||||| |||||||||||||||| ||||||||||    
T  53801799 acaacttttgtgacaactttttttttcatactcacattatctttttactttctctctattgctttagtttttgtgtcaatacctcatttcctttgtaaaa 53801700  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||| ||||||||||||  |  || |||||||||||||||||||||    
T  53801699 ttttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 53801647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 680 - 786
Target Start/End: Complemental strand, 56474457 - 56474351
Alignment:
Q  680 caattacatattaaatcaagtnnnnnnnncatcaatctcttcgtatgtagatcaaaattcatttgattcatccctttactattcatctcattgccttcat 779  Q
    |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  56474457 caattacatattaaatcaagtaaaaaaaacatcaatctcttcgtatgtagatcaaaattcatttgattcatcactttactattcatctcattgccttcct 56474358  T
Q  780 ctcactc 786  Q
     ||||||    
T  56474357 ttcactc 56474351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 26732254 - 26732408
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||| ||||||| ||| ||||| ||||||||||||| ||||||    |||||| ||||||||| |||||| || || |||||||||||||||||||    
T  26732254 acaactttagtgacaactttatctctcatactcacattatctttttattttctctctctattgttttggtttttgtgccactacctcattttctttgtaa 26732353  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||| ||||||||||||  |  || |||||||||||||||||||||    
T  26732354 aattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 26732408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 29175256 - 29175408
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||||||||||||||| ||| ||||| ||||||||||||| ||||||||  |||| | ||| ||| |||||| |||||||| ||||||| ||||||||||    
T  29175256 acaatttttgtgacaactttttctctcatactcacattatctttttactttctctctcttgctttggtttttgtgtcaatagctcatttactttgtaaaa 29175355  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||| ||||||||||||  |  ||  ||||||||||||||||||||    
T  29175356 ttttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 29175408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 42853606 - 42853760
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||||| |||||||| ||||||||||||| |||||||||| |||    |||| ||||| ||| |||||| ||||||||||||||||||||| |||    
T  42853606 acaacttttgtaacaattttatctcttatactcatattatgttttcactttctctctctattgctttggtttttgtgtcaatacctcattttctttataa 42853705  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||| ||||||||||| ||||||    ||| |||||||||||||||||||||    
T  42853706 aattttgattgtctcaaaaattgtcactcaaatggatgttcaaataacacaactc 42853760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 397 - 481
Target Start/End: Complemental strand, 56364017 - 56363933
Alignment:
Q  397 ttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  56364017 ttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatgtaaatggatgttcaaataacacaactc 56363933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 333 - 477
Target Start/End: Complemental strand, 27051126 - 27050978
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttac----tctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    ||||||||||| || ||| ||||| ||||||||||||| |||||||    ||||| ||||||||| |||||| |||||||| ||||||||||||||||||    
T  27051126 aatttttgtgataactttctctctcatactcacattatctttttaccttctctctttattgttttggtttttgtgtcaatatctcattttctttgtaaaa 27051027  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    ||||||||||| ||||||||||||  |  ||  ||||||||||||||||    
T  27051026 ttttggttgtcacaaaagttgtcacatttatgaatgttcaaataacaca 27050978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 395 - 481
Target Start/End: Original strand, 34616658 - 34616744
Alignment:
Q  395 gtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  34616658 gtttttgtgtcaatatctcattttctttataaaattttggttgtctcaaaagttgtcatataaatagatgttcaaataacacaactc 34616744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 395 - 481
Target Start/End: Original strand, 38382418 - 38382504
Alignment:
Q  395 gtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  38382418 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 38382504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 395 - 481
Target Start/End: Original strand, 47181938 - 47182024
Alignment:
Q  395 gtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  47181938 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 47182024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 395 - 481
Target Start/End: Complemental strand, 48402171 - 48402085
Alignment:
Q  395 gtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  48402171 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 48402085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 37297078 - 37297231
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||||||| ||||| ||||||||||||| ||||||    |||||| ||||| ||| |||||| ||||| ||||||| |||| ||||||    
T  37297078 acaacttttgtgacaattttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtcactacctca-tttccttgtaa 37297176  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||| ||||||||||||  |  || |||||||||||||||||||||    
T  37297177 aattttggttgtcacaaaagttgtcaaatatatggatgttcaaataacacaactc 37297231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 335 - 481
Target Start/End: Complemental strand, 2575826 - 2575678
Alignment:
Q  335 tttttgtgacaattttgtctcttatactcacattatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaatttt 432  Q
    |||||| ||||| ||| ||||  ||||||| |||||||| |||||  |||| ||||| ||| |||| | |||||||  |||||||||||||||||| |||    
T  2575826 tttttgcgacaactttctctcacatactcatattatgttgttactttctctctattgctttggtttgtgtgtcaatctctcattttctttgtaaaacttt 2575727  T
Q  433 ggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
     |||||| ||||||||||||| | |||||||||||||||||||||||||    
T  2575726 agttgtcacaaaagttgtcatataaatagatgttcaaataacacaactc 2575678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 358 - 478
Target Start/End: Complemental strand, 19473971 - 19473847
Alignment:
Q  358 atactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcat 453  Q
    |||||||||||||||||| |||    |||| || |||||| |||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  19473971 atactcacattatgttttaactttttctctctaatgttttggtttttgtgtcaatacttcattttctttgtaaaattttgattgtctcaaaagttgtcat 19473872  T
Q  454 gtgaatagatgttcaaataacacaa 478  Q
     | |||  || ||||||||||||||    
T  19473871 ataaatgcatcttcaaataacacaa 19473847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 331 - 478
Target Start/End: Complemental strand, 10250557 - 10250406
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||| ||||||||||||| ||||||||    |||| ||||| ||| |||||| || || ||| |||||||||||||||    
T  10250557 acaacttttgtgacaactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgccactacttcattttctttgtaa 10250458  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaa 478  Q
    ||||||||||||| |||||||||||   |  || ||||||||||||||||||    
T  10250457 aattttggttgtcacaaaagttgtcgcatatatggatgttcaaataacacaa 10250406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 336 - 481
Target Start/End: Complemental strand, 26725006 - 26724860
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttact-ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttgg 434  Q
    ||||||||||| ||| |||||  ||||||| |||| |||||||| |||| ||||||||| |||||| ||||| |||||||||| |||||||||||||| |    
T  26725006 ttttgtgacaactttttctctcttactcacgttatctttttacttctctctattgttttggtttttgtgtcactacctcatttcctttgtaaaattttag 26724907  T
Q  435 ttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||  |||||||| |||  |  || |||||||||||||||||||||    
T  26724906 ttgttacaaaagttatcacatatatggatgttcaaataacacaactc 26724860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 23369374 - 23369220
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| |||||  |||||||||||| ||||||||    |||| ||||| ||| |||||| || || |||||||||| ||||||||    
T  23369374 acaacttttgtgacaactttctctctcttactcacattatctttttactttatctctctattgctttggtttttgtgccactacctcatttcctttgtaa 23369275  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
     |||||||||||| ||||||||||||  |  || |||||||||||||||||||||    
T  23369274 gattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 23369220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 331 - 453
Target Start/End: Original strand, 39478464 - 39478592
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact------ctctatattgttttagtttttatgtcaatacctcattttctttgt 424  Q
    |||| ||||||||||| ||| ||||| ||||||| ||||| ||||||||      |||||||||  |||  ||||| |||||||||||||||||||||||    
T  39478464 acaacttttgtgacaactttctctctcatactcatattatttttttactttctttctctatattactttgatttttgtgtcaatacctcattttctttgt 39478563  T
Q  425 aaaattttggttgtctcaaaagttgtcat 453  Q
    ||||||||||||||| |||||||||||||    
T  39478564 aaaattttggttgtcacaaaagttgtcat 39478592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 300 - 481
Target Start/End: Complemental strand, 7632534 - 7632349
Alignment:
Q  300 agagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttag 395  Q
    ||||||||||||||| ||||||||       |||| |||||||| |||||| ||| | ||||||||||||| ||||||||    |||| ||||| |||      
T  7632534 agagaaatgatatttgaacaatcaatttttgacaacttttgtgataattttctctttcatactcacattatatttttactttctctctctattgctttga 7632435  T
Q  396 tttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||| || ||||  |||||||| |||||||||||||||||||  |||| |||||||| | ||  |||||||||||||||||||||    
T  7632434 tttttgtgccaatcactcattttatttgtaaaattttggttgttgcaaaggttgtcatataaaatgatgttcaaataacacaactc 7632349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 336 - 481
Target Start/End: Original strand, 51986076 - 51986225
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttact--ctctat--attgttttagtttttatgtcaatacctcattttctttgtaaaattt 431  Q
    |||| |||||| ||| ||||| ||||||||||||| ||||||||  ||||||  |||  ||| |||||| || || |||||||||| |||||||||||||    
T  51986076 ttttatgacaactttctctctcatactcacattatctttttactttctctatctatttctttggtttttgtgccactacctcatttcctttgtaaaattt 51986175  T
Q  432 tggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||| ||||||||||||  |  || |||||||||||||||||||||    
T  51986176 tggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 51986225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 331 - 473
Target Start/End: Original strand, 3316380 - 3316529
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttcttt---g 423  Q
    |||| |||||| |||||||| ||||| ||||  |||||| |||||||||    |||| ||||||||| ||||||||| ||||||||| |||| |||   |    
T  3316380 acaacttttgtaacaattttctctctcatacatacattacgtttttactttctctctctattgttttggtttttatgccaatacctcttttttttttttg 3316479  T
Q  424 taaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataa 473  Q
    |||||||||| ||||||||||||||||||| | ||| |||||||||||||    
T  3316480 taaaattttgattgtctcaaaagttgtcatctaaatggatgttcaaataa 3316529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 333 - 452
Target Start/End: Original strand, 40348825 - 40348948
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||||||||||||||||| ||||| ||||||||||||| ||||||    |||||| ||||| ||| |||||| ||||| || ||||||||||||  ||||    
T  40348825 aatttttgtgacaattttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtcactatctcattttctttaaaaaa 40348924  T
Q  429 ttttggttgtctcaaaagttgtca 452  Q
    ||||| ||||| ||||||||||||    
T  40348925 ttttgattgtcacaaaagttgtca 40348948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 297 - 481
Target Start/End: Complemental strand, 50721820 - 50721632
Alignment:
Q  297 aatagagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttt 392  Q
    |||||||||||||||||| ||||| ||       |||| |||||||| || ||| ||| | ||||||||||||| ||||||||    |||| || || ||    
T  50721820 aatagagaaatgatatttgaacaaccaatttttgacaacttttgtgataactttctctttcatactcacattatatttttactttctctctctactgctt 50721721  T
Q  393 tagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    | |||||| |||||||  |||||||||||||||||||||| |||||  |||| |||||||| | ||  |||||||||||||||||||||    
T  50721720 tggtttttgtgtcaatcactcattttctttgtaaaattttagttgttgcaaaggttgtcatataaaatgatgttcaaataacacaactc 50721632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 336 - 450
Target Start/End: Original strand, 29891879 - 29891997
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattt 431  Q
    |||| |||||| ||| ||||| ||||||||||||||||||||    |||| | ||||||||| ||||||||||| ||||||| |||| |||||||||||     
T  29891879 ttttttgacaactttctctctcatactcacattatgtttttagtttctctttctattgttttggtttttatgtctatacctctttttttttgtaaaatta 29891978  T
Q  432 tggttgtctcaaaagttgt 450  Q
    |||||||||||| ||||||    
T  29891979 tggttgtctcaatagttgt 29891997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 43175013 - 43175167
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||||||| || ||| ||||| ||||||||||||| ||||||||    |||| ||| | ||| |||||| ||||| |||||||||| ||||||||    
T  43175013 acaacttttgtgataactttctctctcatactcacattatttttttactttctctctctatggctttggtttttgtgtcactacctcatttcctttgtaa 43175112  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||| || || ||||||||||||  |  || |||||||||||||||||||||    
T  43175113 aattttgattatcacaaaagttgtcacatatatggatgttcaaataacacaactc 43175167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 378 - 478
Target Start/End: Complemental strand, 24575842 - 24575742
Alignment:
Q  378 ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    |||||| ||||| ||| |||||| || ||||||||||||| |||| |||||||||||||||| ||||||||||||  |  ||||||||||||||||||||    
T  24575842 ctctctctattgctttggtttttgtgccaatacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacaca 24575743  T
Q  478 a 478  Q
    |    
T  24575742 a 24575742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 336 - 487
Target Start/End: Complemental strand, 1627595 - 1627437
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattt 431  Q
    |||| |||||| ||| ||||| |||||| |||||||||||||||    |||| | ||| ||| |||||| || ||||||||||||||||||||||| ||     
T  1627595 ttttttgacaactttctctctcatactcgcattatgtttttactttccctctctgttgctttggtttttgtgccaatacctcattttctttgtaaattta 1627496  T
Q  432 tggttgtc---tcaaaagttgtcatgtgaatagatgttcaaataacacaactcgtttaa 487  Q
    ||||||||    |||||||||||||   ||||| ||||||||||||||||||| |||||    
T  1627495 tggttgtcacaacaaaagttgtcatccaaatagttgttcaaataacacaactcttttaa 1627437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 331 - 439
Target Start/End: Complemental strand, 2268549 - 2268437
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||| ||||||||||||| ||||||||    || | ||||||||| |||||| |||||||| ||||||| ||||||||    
T  2268549 acaacttttgtgacaactttctctctcatactcacattatctttttactttttctttctattgttttggtttttgtgtcaatatctcatttcctttgtaa 2268450  T
Q  427 aattttggttgtc 439  Q
    |||||||||||||    
T  2268449 aattttggttgtc 2268437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 378 - 481
Target Start/End: Original strand, 39654904 - 39655007
Alignment:
Q  378 ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    |||||| ||||| |||  ||||| |||||||||||||||||||||||||| || ||||||||| |||| || |||| | ||||| |||||||||||||||    
T  39654904 ctctctctattgctttgatttttgtgtcaatacctcattttctttgtaaatttatggttgtcttaaaaattatcatctaaatagttgttcaaataacaca 39655003  T
Q  478 actc 481  Q
    ||||    
T  39655004 actc 39655007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 333 - 481
Target Start/End: Original strand, 44539767 - 44539917
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaatt 430  Q
    ||||||||||| || ||| ||||| ||||| | ||||| |||||| |  |||| ||||| ||| |||||| || || |||||||||| ||||||||||||    
T  44539767 aatttttgtgataactttctctctcatacttatattatctttttattttctctctattgctttggtttttgtgacactacctcatttcctttgtaaaatt 44539866  T
Q  431 ttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||| ||||||||||||  |  ||  ||||||||||||||||||||    
T  44539867 ttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 44539917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 331 - 477
Target Start/End: Original strand, 37997285 - 37997433
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||  ||||||||||||| ||||||||    |||| ||||| |||  ||||| |||||||||||||||||||||||||    
T  37997285 acaacttttgtgacaactttctctc--atactcacattatctttttactttctctctctattgctttgatttttgtgtcaatacctcattttctttgtaa 37997382  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    ||||||||||||  ||||| || |||  |  ||||||||||||||| ||||    
T  37997383 aattttggttgtaacaaaaattatcacatatatagatgttcaaatagcaca 37997433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 358 - 481
Target Start/End: Original strand, 39195113 - 39195240
Alignment:
Q  358 atactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcat 453  Q
    |||||||||||||||| |||||    |||||||||| ||| |||| | || ||||  |||||||||||||||||| |||| || || |||| ||||||||    
T  39195113 atactcacattatgttgttactttctctctatattgctttggtttgtgtgccaatctctcattttctttgtaaaactttgattatcacaaatgttgtcat 39195212  T
Q  454 gtgaatagatgttcaaataacacaactc 481  Q
     | |||||||||||||||||||||||||    
T  39195213 ataaatagatgttcaaataacacaactc 39195240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 385 - 450
Target Start/End: Complemental strand, 31995899 - 31995834
Alignment:
Q  385 tattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgt 450  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||  ||||||||||||||||    
T  31995899 tattgttttagtttttgtgtcaatacctcattttctttctaaaattttaattgtctcaaaagttgt 31995834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 331 - 473
Target Start/End: Original strand, 38134382 - 38134528
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttactctctat----attgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||||||||||||||| ||| | ||| ||||| ||||||| |||||||| ||| |    |||||||| |||||| ||||| | |||||||| ||||||||    
T  38134382 acaatttttgtgacaactttctttctcatacttacattatctttttactttctttctctattgttttggtttttgtgtcactgcctcatttcctttgtaa 38134481  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataa 473  Q
    |||||||||| || ||||||||||||  || ||  ||||||||||||    
T  38134482 aattttggttatcacaaaagttgtcacatgtatgaatgttcaaataa 38134528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 331 - 487
Target Start/End: Original strand, 27371170 - 27371330
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| | | | |||||||| ||||| |||||||    |||| |||||||| |||||| ||||||||||||  ||||||||||||    
T  27371170 acaacttttgtgacaactttttatttcatactcacgttatgcttttactttctctctctattgtttgagttttcatgtcaatacctacttttctttgtaa 27371269  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactcgtttaa 487  Q
    | || ||||||||||| ||||| |||  | ||| | ||||||||||||||| ||| |||||    
T  27371270 atttatggttgtctcataagttctcaaataaattgttgttcaaataacacacctcttttaa 27371330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 387 - 481
Target Start/End: Complemental strand, 515627 - 515533
Alignment:
Q  387 ttgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||||||||| |||||||||| |||||||||| |||| || || || | |||||||||||||| | |||| || |||||||||||||||||    
T  515627 ttgttttagtttttgtgtcaataccacattttctttataaatttatgattatttcaaaagttgtcatataaataaatattcaaataacacaactc 515533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 5622487 - 5622641
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||| | ||||||||||||| ||||||||    |||| ||||| ||| |||||| ||  | |||||||||| ||||||||    
T  5622487 acaacttttgtgacaactttctctttcatactcacattatctttttactttttctctctattgctttggtttttgtgcaactacctcatttcctttgtaa 5622586  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||| ||| || |||||||||| |  |  |||||| |||||||||||||||||    
T  5622587 aattttagttatcacaaaagttgtgacatatatagatcttcaaataacacaactc 5622641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 26492038 - 26492190
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttac--tctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||| ||||||| ||| ||| ||||| ||| ||| ||||| ||||||   ||||| ||||| ||| |||||| || || ||| |||||| ||||||||||    
T  26492038 acaacttttgtggcaactttatctctcatattcagattatctttttatcttctctctattgctttggtttttgtgccactacttcatttcctttgtaaaa 26492137  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||| ||||| ||||| ||||||  |  ||||||||||||||||||||||||    
T  26492138 ttttgattgtcacaaaaattgtcacatatatagatgttcaaataacacaactc 26492190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 50831797 - 50831643
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||||| |||| |||  |||| |||||||||| |||| ||||||    |||| ||||| |||  ||||| |||||| ||||| ||||||||||||    
T  50831797 acaacttttgtaacaactttccctctcatactcacatcatgtctttactttctctctctattgctttgatttttgtgtcaagacctctttttctttgtaa 50831698  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||| |||||||| ||||||||||||    ||| | |||||||||||||||||||    
T  50831697 aattatggttgtcccaaaagttgtcaatcaaatggttgttcaaataacacaactc 50831643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 336 - 481
Target Start/End: Complemental strand, 31641602 - 31641453
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttactctctat----attgttttagtttttatgtcaatacctcattttctttgtaaaattt 431  Q
    ||||||||||| ||| ||||| | ||||||||||| |||||||| ||| |    |||| |||  ||||| ||||| ||||| |||| |||| ||||||||    
T  31641602 ttttgtgacaactttctctctcacactcacattatatttttactttctgtctccattgctttgatttttgtgtcactaccttatttcctttataaaattt 31641503  T
Q  432 tggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||| |||||||| ||| ||  ||  ||||||||||||||||||||    
T  31641502 tggttgtcacaaaagttatcacgtatatgaatgttcaaataacacaactc 31641453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 333 - 486
Target Start/End: Original strand, 46213001 - 46213158
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||||||||||||| ||| |||||  |||||||||||| ||||||||    |||| | ||| ||| |||||| ||  | |||||||||| ||||||||||    
T  46213001 aatttttgtgacaactttttctctcgtactcacattatctttttactttttctctctgttgctttggtttttgtgcaactacctcatttcctttgtaaaa 46213100  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactcgttta 486  Q
    ||||||||||  |||||||| |||  |  || ||| ||||||||||||||||| ||||    
T  46213101 ttttggttgttacaaaagttttcacatatatggattttcaaataacacaactcattta 46213158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 301 - 425
Target Start/End: Complemental strand, 149556 - 149428
Alignment:
Q  301 gagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgttt----ttactctctatattgttttagt 396  Q
    |||||||||||||| ||||||||       | |||||||||||||| ||| ||||| |||||||||||||||||    || |||||| ||||| ||||||    
T  149556 gagaaatgatatttgaacaatcactttttgataatttttgtgacaactttctctctcatactcacattatgtttcaactttctctctctattgctttagt 149457  T
Q  397 ttttatgtcaatacctcattttctttgta 425  Q
    |||| ||||| ||||| | ||||||||||    
T  149456 ttttgtgtcactacctaaatttctttgta 149428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 331 - 482
Target Start/End: Original strand, 39440513 - 39440668
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||||||| |||||| ||| | ||||||||||| |  |||||    |||||| ||||| |||  ||||| ||||| |||||||||| |||| |||    
T  39440513 acaacttttgtgataattttctctttcatactcacattttcattttactttctctctctattgctttgatttttgtgtcactacctcatttcctttctaa 39440612  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactcg 482  Q
    ||||||| ||||| ||||||||||||  |  ||  |||||||||||||||||||||    
T  39440613 aattttgattgtcacaaaagttgtcacatatatgaatgttcaaataacacaactcg 39440668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 19165443 - 19165362
Alignment:
Q  358 atactcacattatgtttttactctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtc 439  Q
    ||||||||||||| |||||||||||| ||||||||| |||||| || |||||| |  |||||||||||||| | ||||||||    
T  19165443 atactcacattatatttttactctctctattgttttggtttttgtgccaatacatatttttctttgtaaaaatatggttgtc 19165362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 337 - 439
Target Start/End: Complemental strand, 29531642 - 29531536
Alignment:
Q  337 tttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaatttt 432  Q
    |||||||||| ||| ||||| ||||||| ||||| |||||| |    || | ||||||||| |||||| ||||| |||||||||| ||||||||||||||    
T  29531642 tttgtgacaactttctctctcatactcatattatctttttattttttctttctattgttttggtttttgtgtcactacctcatttcctttgtaaaatttt 29531543  T
Q  433 ggttgtc 439  Q
    |||||||    
T  29531542 ggttgtc 29531536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 36177935 - 36178089
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttactctctat----attgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||  ||||||| ||||| ||||||||||||| |||||||| ||| |    |||| ||| |||||| |  || |||||||||| |||| |||    
T  36177935 acaacttttgtcgcaattttctctctcatactcacattatctttttactttctttctctattgctttggtttttgtaccactacctcatttcctttataa 36178034  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||| |||||| |||||||| |||  |  ||| ||||||||||||||||||||    
T  36178035 aattttagttgtcacaaaagttatcacatatataaatgttcaaataacacaactc 36178089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 331 - 452
Target Start/End: Original strand, 37060347 - 37060469
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttac--tctctatattgttttagtttttatgtcaatacctca-ttttctttgtaaa 427  Q
    |||| ||||||||||| ||| ||||| ||| ||||||||| |||||||  ||||| ||||| ||| ||| |||||||||||  ||| |||||||||| ||    
T  37060347 acaacttttgtgacaactttctctctcatattcacattatatttttaccttctctctattgctttggttcttatgtcaata-ttcatttttctttgt-aa 37060444  T
Q  428 attttggttgtctcaaaagttgtca 452  Q
    |||| ||||||||||||||||||||    
T  37060445 atttaggttgtctcaaaagttgtca 37060469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 339 - 477
Target Start/End: Original strand, 53796693 - 53796835
Alignment:
Q  339 tgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttgg 434  Q
    |||||||| ||| ||||||||||||||||||| ||||||    |||||| ||||||||||||||   ||||| || ||  ||| ||||||||| |  |||    
T  53796693 tgtgacaactttatctcttatactcacattatttttttactttctctctctattgttttagtttccgtgtcactatctactttcctttgtaaattagtgg 53796792  T
Q  435 ttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    ||||| |||||||||||||   | ||| |||||||||||||||    
T  53796793 ttgtcacaaaagttgtcattcaattagttgttcaaataacaca 53796835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 336 - 477
Target Start/End: Complemental strand, 6520868 - 6520725
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttac--tctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttg 433  Q
    |||||| |||| ||| ||||| |||||||||||||||||||||  ||||| ||||||||| ||||| ||||||| ||||  ||||||||| ||  || ||    
T  6520868 ttttgtaacaactttctctctcatactcacattatgtttttactttctctctattgttttggttttcatgtcaacacctatttttctttgaaattttatg 6520769  T
Q  434 gttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    |||||  ||||  |||||||   ||| | |||||||||||||||    
T  6520768 gttgtaccaaatattgtcatacaaatggttgttcaaataacaca 6520725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 385 - 481
Target Start/End: Original strand, 15175633 - 15175729
Alignment:
Q  385 tattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||| ||| |||||| ||  |||||||||||| ||||||||||||||||||||  ||||||||||||  |  || ||||||||||||| |||||||    
T  15175633 tattgcttttgtttttgtgctaatacctcatttcctttgtaaaattttggttgtaacaaaagttgtcacatatatggatgttcaaataatacaactc 15175729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 331 - 428
Target Start/End: Complemental strand, 31469030 - 31468929
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttac----tctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||||||||||||||||||| |||||||| |||||||||| |||||||    | ||| ||||  |||||||||  ||||||||| | |||||||||||||    
T  31469030 acaatttttgtgacaattttctctcttatgctcacattatatttttactttatttctctattactttagttttcgtgtcaatacatgattttctttgtaa 31468931  T
Q  427 aa 428  Q
    ||    
T  31468930 aa 31468929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 331 - 480
Target Start/End: Complemental strand, 40693664 - 40693513
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttac--tctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||||||||| |||||  || ||||| |||||||||||||||||||||  ||||| ||||| |||| ||||| || |||||| |  ||||||||| ||||    
T  40693664 acaatttttgagacaaccttctctctcatactcacattatgtttttactttctctctattgctttaatttttgtgccaatacattcttttctttgcaaaa 40693565  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaact 480  Q
    |||| | |||   |||||||||||  | | | | ||||||||||||||||||    
T  40693564 ttttagatgtactaaaagttgtcacataatttgttgttcaaataacacaact 40693513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 385 - 481
Target Start/End: Original strand, 42491161 - 42491257
Alignment:
Q  385 tattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||| ||| |||||| || ||||||||| |||||||||| ||||| |||||||| ||||||||||||    ||| | |||||||||||||||||||    
T  42491161 tattgctttggtttttgtgccaatacctctttttctttgtgaaattatggttgtcccaaaagttgtcaatcaaatggttgttcaaataacacaactc 42491257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 358 - 427
Target Start/End: Original strand, 52223239 - 52223310
Alignment:
Q  358 atactcacattatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaa 427  Q
    ||||||||| ||||||||||||  |||| ||||||||| |||||| | ||||||||||||||||||||||||    
T  52223239 atactcacaatatgtttttactttctctgtattgttttggtttttgtatcaatacctcattttctttgtaaa 52223310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 418 - 481
Target Start/End: Complemental strand, 5233621 - 5233558
Alignment:
Q  418 tctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||||||||||| |||| ||||||||||| |  | |||||||||||||||||||||||||    
T  5233621 tctttgtaaaattttgattgtttcaaaagttgttacataaatagatgttcaaataacacaactc 5233558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 336 - 452
Target Start/End: Complemental strand, 38381113 - 38380993
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattt 431  Q
    |||| |||||||||| ||||| ||||| ||||||||||||||    |||||| ||||| |||  ||||| |  ||||||||| |||||||| | |||||     
T  38381113 ttttttgacaattttctctctcatacttacattatgtttttattttctctctctattgctttgatttttgtaccaatacctctttttctttatgaaatta 38381014  T
Q  432 tggttgtctcaaaagttgtca 452  Q
    ||||||||| |||||||||||    
T  38381013 tggttgtcttaaaagttgtca 38380993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 336 - 427
Target Start/End: Complemental strand, 46767978 - 46767884
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacatta-tgtttttactctctat--attgttttagtttttatgtcaatacctcattttctttgtaaa 427  Q
    |||||||| |||||| ||| ||||||||| |||| |||||||||||||| |  |||||||||||||| ||||||||| || ||||| ||||||||    
T  46767978 ttttgtgataattttatcttttatactcatattactgtttttactctctctttattgttttagttttcatgtcaatatctaattttttttgtaaa 46767884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 411 - 481
Target Start/End: Complemental strand, 38376448 - 38376378
Alignment:
Q  411 ctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||||||||||||| ||||| ||||| || |||  |  ||||||||||||||||||||||||    
T  38376448 ctcattttctttgtaaaattttgattgtcacaaaaattatcacatatatagatgttcaaataacacaactc 38376378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 336849 - 336695
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttt----ttactctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||||||||||||||| ||| ||||| ||| ||||||| | |||    || |||||| ||||| |||  ||||| || ||||||| | ||||||||| ||    
T  336849 acaatttttgtgacaactttctctctcatattcacattgtatttttgctttctctctctattgctttgatttttgtgccaataccactttttctttgcaa 336750  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    | |  ||||||| ||||||||||||||   || || |||||||||||||||||||    
T  336749 attaatggttgtatcaaaagttgtcataaaaaaagttgttcaaataacacaactc 336695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 352 - 478
Target Start/End: Original strand, 11068738 - 11068868
Alignment:
Q  352 tctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagt 447  Q
    ||||| ||| ||||||||| ||||||||    |||| ||||| |||  ||||| ||||| | |||||||| ||||||||||||||||||| | |||||||    
T  11068738 tctctcatattcacattatctttttactttctctctctattgctttgatttttgtgtcactgcctcatttcctttgtaaaattttggttgccacaaaagt 11068837  T
Q  448 tgtcatgtgaatagatgttcaaataacacaa 478  Q
    |||||  |  ||  |||||||||||||||||    
T  11068838 tgtcacatatatgaatgttcaaataacacaa 11068868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 331 - 480
Target Start/End: Complemental strand, 25221764 - 25221613
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||||||| |||  |||| ||||||||||||||||    |||| | ||||||||| ||||||||  |||||| || ||| |||| |||    
T  25221764 acaacttttgtgacaattttatct--tatattcacattatgtttttactttctctttctattgttttggtttttataccaatacatcttttcctttataa 25221667  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaact 480  Q
    |||| |||||||| | |||||||||     ||| | ||||||||||||||||||    
T  25221666 aattatggttgtccccaaagttgtctatcaaatggttgttcaaataacacaact 25221613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 352 - 466
Target Start/End: Complemental strand, 27354375 - 27354257
Alignment:
Q  352 tctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagt 447  Q
    ||||| ||||||||||||||||||||||    ||||  ||||||||  ||||| |  |||| | ||||||| ||||||||||||||||||||| |||| |    
T  27354375 tctctcatactcacattatgtttttactttttctctcaattgttttgatttttgtaccaatccttcattttttttgtaaaattttggttgtcttaaaatt 27354276  T
Q  448 tgtcatgtgaatagatgtt 466  Q
    |||||| | ||| ||||||    
T  27354275 tgtcatataaatggatgtt 27354257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 336 - 481
Target Start/End: Original strand, 27965021 - 27965168
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttactctct----atattgttttagtttttatgtcaatacctcattttctttgtaaaattt 431  Q
    ||||||||||| ||| | | | ||||||||||||| |||||||| |||     ||||| ||| |||||| ||||| |||||||||| | |  ||||||||    
T  27965021 ttttgtgacaactttttatttcatactcacattatctttttactttctttccctattgctttggtttttgtgtcactacctcatttccat--taaaattt 27965118  T
Q  432 tggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||| || |||||||||  |  || |||||||||||||||||||||    
T  27965119 tggttgtcacagaagttgtcacatatatggatgttcaaataacacaactc 27965168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 385 - 440
Target Start/End: Complemental strand, 49449147 - 49449092
Alignment:
Q  385 tattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtct 440  Q
    ||||||||| |||||| ||  |||||||||||||||||||||||||||| ||||||    
T  49449147 tattgttttggtttttgtgctaatacctcattttctttgtaaaattttgattgtct 49449092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 337 - 412
Target Start/End: Original strand, 5249904 - 5249983
Alignment:
Q  337 tttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacct 412  Q
    |||||||||| ||| ||||| ||||||||||||||||||||    |||||| ||||||||| |||||  |||||||||||    
T  5249904 tttgtgacaactttctctctcatactcacattatgtttttactttctctctctattgttttggttttcgtgtcaatacct 5249983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 391 - 449
Target Start/End: Complemental strand, 32130217 - 32130159
Alignment:
Q  391 tttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttg 449  Q
    |||| ||||| | ||||||| |||||||||||||| |||||||||||| ||||||||||    
T  32130217 tttaatttttgtatcaatacatcattttctttgtataattttggttgtttcaaaagttg 32130159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 372 - 478
Target Start/End: Complemental strand, 42396034 - 42395928
Alignment:
Q  372 tttttactctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaat 471  Q
    ||||| |||||| ||||| |||  ||||| ||  ||||||||||||| ||||||||| |||  || |||||||| || |||| | | |||||||||||||    
T  42396034 ttttttctctctctattgctttgatttttgtgcaaatacctcattttttttgtaaaactttaattatctcaaaaattatcatataagtagatgttcaaat 42395935  T
Q  472 aacacaa 478  Q
    |||||||    
T  42395934 aacacaa 42395928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 378 - 487
Target Start/End: Complemental strand, 12595621 - 12595512
Alignment:
Q  378 ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    |||||| ||||||||| |||||  |||||||||||  ||| |||| |||| || |||||||| ||||| |||||||   ||| | |||||||||||||||    
T  12595621 ctctctctattgttttggttttcgtgtcaatacctactttcctttataaatttatggttgtcccaaaaattgtcatcaaaatggttgttcaaataacaca 12595522  T
Q  478 actcgtttaa 487  Q
     ||| |||||    
T  12595521 tctcttttaa 12595512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 336 - 453
Target Start/End: Original strand, 24990148 - 24990270
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgttttt-act----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaatt 430  Q
    ||||||||||||||| | ||||||||||| ||||||||||| |||    || | ||||||||| |||||| | || | ||||  ||||||||||||| ||    
T  24990148 ttttgtgacaattttttttcttatactcaaattatgttttttactttatctttttattgttttggtttttgtatcgacacctatttttctttgtaaattt 24990247  T
Q  431 ttggttgtctcaaaagttgtcat 453  Q
     |||||||| || ||||||||||    
T  24990248 atggttgtcccataagttgtcat 24990270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 292 - 427
Target Start/End: Original strand, 31559529 - 31559668
Alignment:
Q  292 atttaaatagagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatat 387  Q
    |||| ||||||||||||||||||  |||||||       | |||  ||||||||||||| ||||| ||||||||||||| ||||||    |||||| |||    
T  31559529 attttaatagagaaatgatatttgtacaatcattttttgataatagttgtgacaattttctctctcatactcacattatatttttactttctctctctat 31559628  T
Q  388 tgttttagtttttatgtcaatacctcattttctttgtaaa 427  Q
    |||||| |||||  ||| |||||||  |||||||| ||||    
T  31559629 tgttttggttttcgtgttaatacctacttttctttctaaa 31559668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 45796487 - 45796422
Alignment:
Q  345 aattttgtctcttatactcacattatgtttttactctctatattgttttagtttttatgtcaatac 410  Q
    |||||| ||||||||| | |||||||||||||||| |||||  |||||| ||||| ||||||||||    
T  45796487 aattttctctcttatatttacattatgtttttactttctatcgtgttttggttttcatgtcaatac 45796422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 50890115 - 50889961
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttt----ttactctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||| ||||||||||||| |||    || |||||| ||||| |||  ||||| || ||||||| | ||||||||| ||    
T  50890115 acaacttttgtgacaactttctctctcatactcacattatatttttgctttctctctctattgctttgatttttgtgccaataccactttttctttgcaa 50890016  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    | |  ||||||| ||||||||||| ||   ||  | |||||||||||||||||||    
T  50890015 attaatggttgtatcaaaagttgttataaaaaaggttgttcaaataacacaactc 50889961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 52430907 - 52431061
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttac----tctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||| |||||||||| |||||  |||||| |||||||||||||    ||||| |||| |||| |||||| ||||||||| |  |||| |||||||    
T  52430907 acaacttttatgacaattttctctctcgtactcatattatgtttttaccttgtctctctattattttggtttttgtgtcaatacttacttttgtttgtaa 52431006  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |  | |  |||||||| | ||||||||   ||| | |||||||||||||||||||    
T  52431007 agctataattgtctcataggttgtcatacaaatggttgttcaaataacacaactc 52431061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 452
Target Start/End: Original strand, 56557763 - 56557885
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttac--tctctatattgttttagtttttatgtcaatacctcat-tttctttgtaaa 427  Q
    |||| ||||||||||||||| ||||| ||||||||||| |||||||||  ||||| ||||| ||| || ||| || ||||| ||||| ||||||| | |     
T  56557763 acaacttttgtgacaattttctctctcatactcacattgtgtttttaccttctctctattgctttggtatttgtgccaata-ctcatatttctttct-at 56557860  T
Q  428 attttggttgtctcaaaagttgtca 452  Q
    |||| ||||||| ||||||||||||    
T  56557861 atttaggttgtcccaaaagttgtca 56557885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 379 - 427
Target Start/End: Complemental strand, 12387655 - 12387607
Alignment:
Q  379 tctctatattgttttagtttttatgtcaatacctcattttctttgtaaa 427  Q
    ||||| |||||||||  ||||| ||||||||||||||||||||||||||    
T  12387655 tctctttattgttttgatttttgtgtcaatacctcattttctttgtaaa 12387607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 331 - 428
Target Start/End: Complemental strand, 31574981 - 31574880
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||||||| |||||| ||||| ||||||||||||| ||||||    |||||| ||||| |||  ||||| | ||||||| | |||||||||||||    
T  31574981 acaacttttgtgataattttctctctcatactcacattatatttttattttctctctctattgctttgatttttgtatcaatacatgattttctttgtaa 31574882  T
Q  427 aa 428  Q
    ||    
T  31574881 aa 31574880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 402 - 442
Target Start/End: Original strand, 39447851 - 39447891
Alignment:
Q  402 tgtcaatacctcattttctttgtaaaattttggttgtctca 442  Q
    |||||||||||||||||||||||||||||||| || |||||    
T  39447851 tgtcaatacctcattttctttgtaaaattttgattatctca 39447891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 44257771 - 44257723
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    |||||||||||||||| ||| ||||| ||||||||||||| ||||||||    
T  44257771 acaatttttgtgacaactttctctctcatactcacattatatttttact 44257723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 422 - 478
Target Start/End: Complemental strand, 49449092 - 49449036
Alignment:
Q  422 tgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaa 478  Q
    ||||||||||||||||||| |||||||||||| | |||  ||||| |||||||||||    
T  49449092 tgtaaaattttggttgtcttaaaagttgtcatataaatgaatgtttaaataacacaa 49449036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 336 - 379
Target Start/End: Original strand, 17367111 - 17367154
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    ||||||||||| ||| |||||||||||| |||||||||||||||    
T  17367111 ttttgtgacaactttctctcttatactcgcattatgtttttact 17367154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 415 - 481
Target Start/End: Complemental strand, 47744467 - 47744400
Alignment:
Q  415 ttttctttgtaaaattttggttgtctcaaaagttgtc-atgtgaatagatgttcaaataacacaactc 481  Q
    |||||||||||||||| |||||||| |||||||| || ||   ||||| |||||||||||||||||||    
T  47744467 ttttctttgtaaaattatggttgtcccaaaagttatcaatcaaaatagttgttcaaataacacaactc 47744400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 379 - 477
Target Start/End: Complemental strand, 11672113 - 11672015
Alignment:
Q  379 tctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    ||||| ||||| |||  ||||| ||||||||  | ||||||||| |||||||||   |||| |||||||||| || | ||||||| |||||||||||||    
T  11672113 tctctctattgctttgatttttgtgtcaataatttattttctttataaaattttaagtgtcacaaaagttgtaatataaatagattttcaaataacaca 11672015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 26440700 - 26440746
Alignment:
Q  337 tttgtgacaattttgtctcttatactcacattatgtttttactctct 383  Q
    |||||||||||||| ||||  ||||||||||||| ||||||||||||    
T  26440700 tttgtgacaattttatctcccatactcacattatatttttactctct 26440746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 331 - 438
Target Start/End: Original strand, 47288112 - 47288223
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttac----tctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||||||||||||||| ||| ||||| |||||| | |||| |||||||    ||||| ||||||||| ||||   |||| ||||||  ||||||||||||    
T  47288112 acaatttttgtgacaactttctctctcatactcgcgttatatttttactttttctctctattgttttggtttccgtgtcgatacctacttttctttgtaa 47288211  T
Q  427 aattttggttgt 438  Q
    | || |||||||    
T  47288212 atttatggttgt 47288223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 341 - 383
Target Start/End: Original strand, 48722108 - 48722150
Alignment:
Q  341 tgacaattttgtctcttatactcacattatgtttttactctct 383  Q
    |||||||||| ||||| |||||||||||||||||||| |||||    
T  48722108 tgacaattttctctctcatactcacattatgtttttattctct 48722150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 331 - 377
Target Start/End: Original strand, 52895257 - 52895303
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta 377  Q
    |||||||||||||||| ||| ||||| ||| ||||||||||||||||    
T  52895257 acaatttttgtgacaactttatctctcataatcacattatgttttta 52895303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 410
Target Start/End: Complemental strand, 18568483 - 18568405
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttac----tctctatattgttttagtttttatgtcaatac 410  Q
    ||||||||||||||| ||||||||||||| |||||  ||||||    ||||| ||||||||| |||||  |||||||||    
T  18568483 ttttgtgacaattttctctcttatactcatattatacttttacattttctctctattgttttggttttcgtgtcaatac 18568405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 407 - 452
Target Start/End: Complemental strand, 19174736 - 19174691
Alignment:
Q  407 atacctcattttctttgtaaaattttggttgtctcaaaagttgtca 452  Q
    |||||| |||||||||||||| || || ||||||||||||||||||    
T  19174736 atacctaattttctttgtaaatttatgtttgtctcaaaagttgtca 19174691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 341 - 439
Target Start/End: Complemental strand, 50608656 - 50608554
Alignment:
Q  341 tgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggtt 436  Q
    |||||| ||| ||| | ||||||||||||| ||||||||    |||| ||||  |||  ||||| |||||||| ||||||| |||||||||||||| |||    
T  50608656 tgacaactttctctttcatactcacattatttttttacttcctctctctattactttgatttttgtgtcaatatctcatttcctttgtaaaattttagtt 50608557  T
Q  437 gtc 439  Q
    |||    
T  50608556 gtc 50608554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 383
Target Start/End: Complemental strand, 52456958 - 52456917
Alignment:
Q  342 gacaattttgtctcttatactcacattatgtttttactctct 383  Q
    ||||||||| ||||| ||||||||||||| ||||||||||||    
T  52456958 gacaattttctctctcatactcacattatatttttactctct 52456917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 377
Target Start/End: Complemental strand, 52911826 - 52911785
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgttttta 377  Q
    |||| |||||||||| ||||| ||||||||||||||||||||    
T  52911826 ttttttgacaattttctctctcatactcacattatgttttta 52911785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 1e-40; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 343 - 481
Target Start/End: Original strand, 26595390 - 26595532
Alignment:
Q  343 acaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgt 438  Q
    |||||||| ||||| ||||||||||||||||||||||    |||| ||||| ||| |||||| |||||||||||||||||||||||||||||||||||||    
T  26595390 acaattttttctctcatactcacattatgtttttactttctctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggttgt 26595489  T
Q  439 ctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
     |||||||||||||| | ||| |||||||||||||||||||||    
T  26595490 ttcaaaagttgtcatataaatggatgttcaaataacacaactc 26595532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 293 - 488
Target Start/End: Complemental strand, 2242101 - 2241907
Alignment:
Q  293 tttaaatagagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttactctctatattgttt 392  Q
    |||||| ||||||||||||||| ||||||||       |||||||||||||||| ||| ||||| |||||||||||| ||||||| | ||| ||||| ||    
T  2242101 tttaaaaagagaaatgatatttgaacaatcattttttgacaatttttgtgacaactttctctctcatactcacattaagtttttattttctctattgctt 2242002  T
Q  393 tagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactcgtttaaa 488  Q
    | |||||| ||||||| ||||||||||||||||  |||||||||||| |||||||| |||||| || | | ||||||||||||||| || ||||||    
T  2242001 tggtttttgtgtcaatgcctcattttctttgtattattttggttgtcacaaaagttatcatgtaaaga-aagttcaaataacacaagtcttttaaa 2241907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 22079605 - 22079451
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||| | ||||||||||||||||||||    |||| ||||| |||  ||||| ||||||||| |||||||||||| ||    
T  22079605 acaacttttgtgacaactttctctctcacactcacattatgtttttactttctctctctattgctttgatttttgtgtcaatacatcattttctttgcaa 22079506  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||| ||||||| ||||| | ||| |||||||||||||||||||||    
T  22079505 aattttggttgtcacaaaagtggtcatctaaatggatgttcaaataacacaactc 22079451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 300 - 481
Target Start/End: Complemental strand, 17551451 - 17551267
Alignment:
Q  300 agagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttag 395  Q
    ||||||||||||||| ||||| ||       |||| |||||| |||| ||| ||||| ||||||||||||||||||||||    |||| ||||||||| |    
T  17551451 agagaaatgatatttgaacaaccattttttgacaacttttgtaacaactttctctctcatactcacattatgtttttactttatctctctattgttttgg 17551352  T
Q  396 tttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||| ||||||| ||||||||||||| |||| ||||||||||| |||| | ||||||   |||||||||||||||||||||||||    
T  17551351 tttttgtgtcaatccctcattttctttataaa-ttttggttgtcacaaatgctgtcataaaaatagatgttcaaataacacaactc 17551267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 395 - 481
Target Start/End: Original strand, 16199547 - 16199633
Alignment:
Q  395 gtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  16199547 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 16199633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 5694193 - 5694039
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    ||||||||||||| |||||| | ||| ||| ||||||||||||||||||    |||| |||||||||  ||||| |||||||||||||||| ||||||||    
T  5694193 acaatttttgtgataattttatttctcatattcacattatgtttttactttttctctctattgttttgatttttgtgtcaatacctcatttcctttgtaa 5694094  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||| ||||||||||||||||||||  |  ||  ||||| ||||||||||||||    
T  5694093 aatttaggttgtctcaaaagttgtcacatacatgaatgtttaaataacacaactc 5694039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 14817961 - 14818115
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||||||||||||||| ||| ||||| |||||||| || | ||||||||    |||| ||||||||| |||||| || || |||||||||| |||| |||    
T  14817961 acaatttttgtgacaactttctctctcatactcactttttctttttactttctctctttattgttttggtttttgtgccactacctcatttcctttctaa 14818060  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||| ||||||||||||| |  ||| ||||||||||||||||||||    
T  14818061 aattttggttgtcacaaaagttgtcatatatataaatgttcaaataacacaactc 14818115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 379 - 481
Target Start/End: Original strand, 4820448 - 4820550
Alignment:
Q  379 tctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaa 478  Q
    ||||| ||||| |||  ||||| ||||||| |||||||||||||||||||||||| |||||||||||||| |||||| ||||| ||||||||||||||||    
T  4820448 tctctctattgctttgatttttgtgtcaatgcctcattttctttgtaaaattttgattgtctcaaaagttatcatgtaaatagttgttcaaataacacaa 4820547  T
Q  479 ctc 481  Q
    |||    
T  4820548 ctc 4820550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 358 - 481
Target Start/End: Complemental strand, 32316943 - 32316816
Alignment:
Q  358 atactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcat 453  Q
    ||||||||||||| ||||||||    |||| ||||| ||| |||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||     
T  32316943 atactcacattatctttttactttatctctctattgctttggtttttgtgtcagtacctcattttctttgtaaaattttggttgtcacaaaagttgtcac 32316844  T
Q  454 gtgaatagatgttcaaataacacaactc 481  Q
     |  || |||||||||||||||||||||    
T  32316843 atatatggatgttcaaataacacaactc 32316816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 339 - 481
Target Start/End: Original strand, 552830 - 552976
Alignment:
Q  339 tgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttgg 434  Q
    |||||||| ||||||||| ||| ||||||||| ||||||||    |||| ||||| ||| |||||| || || |||||||||| ||||||||||||||||    
T  552830 tgtgacaactttgtctctcatattcacattatctttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttgg 552929  T
Q  435 ttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||| ||||||||||||  |  || |||||||||||||||||||||    
T  552930 ttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 552976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 378 - 476
Target Start/End: Complemental strand, 18737558 - 18737460
Alignment:
Q  378 ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacac 476  Q
    |||||| ||||||||| |||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||  |  || ||||||||||||||||    
T  18737558 ctctctttattgttttggtttttgtgacaatacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatacatggatgttcaaataacac 18737460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 34047416 - 34047570
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttac----tctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||| ||||||||||||| ||||||     ||||| ||||| ||| |||||| || ||||| ||| ||||||||||||    
T  34047416 acaacttttgtgacaactttctctctcatactcacattatctttttatcttatctctctattgctttggtttttgtgccaatatctctttttctttgtaa 34047515  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||| ||||||||||||  |  || ||||||||||||||| |||||    
T  34047516 aattttggttgtcacaaaagttgtcacatttatggatgttcaaataacaaaactc 34047570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 378 - 481
Target Start/End: Original strand, 30457585 - 30457688
Alignment:
Q  378 ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    |||||| | ||||||| |||||| ||||||||||||||||||| ||| ||||||||||| |||||||||||||||| | ||| |||||| || |||||||    
T  30457585 ctctctttgttgttttggtttttgtgtcaatacctcattttctatgtgaaattttggttatctcaaaagttgtcatataaatggatgttgaattaacaca 30457684  T
Q  478 actc 481  Q
    ||||    
T  30457685 actc 30457688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 336 - 481
Target Start/End: Original strand, 31077827 - 31077977
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttactct-----ctatattgttttagtttttatgtcaatacctcattttctttgtaaaatt 430  Q
    ||||||||||| ||| ||||| ||||| || |||| |||||||| |     || ||||||||| |||||| ||||| ||||||| || ||||||||||||    
T  31077827 ttttgtgacaactttctctctcatacttacgttatctttttacttttctttctctattgttttggtttttgtgtcactacctcacttcctttgtaaaatt 31077926  T
Q  431 ttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||| ||||||||||||  || ||  || |||||||||||||||||    
T  31077927 ttggttgtcacaaaagttgtcacatgtatgaatattcaaataacacaactc 31077977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 331 - 436
Target Start/End: Complemental strand, 5080609 - 5080500
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||| | ||||||||||||| ||||||||    |||| ||||| |||||||||| ||||| |||||||||| ||||||||    
T  5080609 acaacttttgtgacaactttctctttcatactcacattatttttttactttctctctctattgctttagtttttgtgtcactacctcatttcctttgtaa 5080510  T
Q  427 aattttggtt 436  Q
    ||||||||||    
T  5080509 aattttggtt 5080500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 385 - 469
Target Start/End: Complemental strand, 11014974 - 11014890
Alignment:
Q  385 tattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaa 469  Q
    ||||| |||| ||||| ||||||||||||||||||||  |||||||||| |||||||||||||| |||| | |||||||||||||    
T  11014974 tattgatttaatttttgtgtcaatacctcattttcttcataaaattttgattgtctcaaaagttatcatataaatagatgttcaa 11014890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 337 - 481
Target Start/End: Original strand, 15974643 - 15974791
Alignment:
Q  337 tttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaatttt 432  Q
    ||||| |||| ||| ||||| ||| ||||||||| ||||||    |||||| ||||| ||| |||||| ||| | ||| |||||| ||||||||||||||    
T  15974643 tttgttacaactttctctctcatattcacattatctttttattttctctctctattgctttggtttttgtgttactacttcatttcctttgtaaaatttt 15974742  T
Q  433 ggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||| |||||||||| |  |  || |||||||||||||||||||||    
T  15974743 ggttgtcacaaaagttgttacatatatggatgttcaaataacacaactc 15974791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 331 - 470
Target Start/End: Complemental strand, 3853349 - 3853206
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||||||| || ||| ||||| ||| |||| ||||||||| |||    |||| ||||| |||  ||||| |||||||| ||||||||||||||||    
T  3853349 acaacttttgtgataactttctctctcataatcaccttatgttttaactttctctctctattgctttgatttttgtgtcaatatctcattttctttgtaa 3853250  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaa 470  Q
    ||| || |||||||||||||||||||| | |||  |||||||||    
T  3853249 aatctttgttgtctcaaaagttgtcatataaatgaatgttcaaa 3853206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 341 - 480
Target Start/End: Original strand, 11612227 - 11612370
Alignment:
Q  341 tgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggtt 436  Q
    |||||||||| ||||||||||||||||||| ||||||    || ||| ||||| |||| ||||| ||  |||||||||||||||||||||||||||| ||    
T  11612227 tgacaattttttctcttatactcacattatctttttactttctttctctattgctttaatttttgtgcaaatacctcattttctttgtaaaattttgatt 11612326  T
Q  437 gtctcaaaagttgtcatgtgaatagatgttcaaataacacaact 480  Q
     || ||||| || |||  |  ||| || ||||||||||||||||    
T  11612327 atcacaaaaattatcacatatataaatattcaaataacacaact 11612370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 356 - 481
Target Start/End: Complemental strand, 33430373 - 33430250
Alignment:
Q  356 ttatactcacattatgtttttactctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgt 455  Q
    ||||||||| ||||| |||||||| ||| ||  | ||| |||||| ||||| |||||||||| ||||||||||||||||||||| ||||||||||||  |    
T  33430373 ttatactcatattatctttttactttctcta--gctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacat 33430276  T
Q  456 gaatagatgttcaaataacacaactc 481  Q
      ||  |||| |||||||||||||||    
T  33430275 atatgaatgtccaaataacacaactc 33430250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 396 - 481
Target Start/End: Complemental strand, 33603253 - 33603168
Alignment:
Q  396 tttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||| ||||||||||||||||||||||||||||||||    ||| |||||||||||| | ||| |||||||||| ||||||||||    
T  33603253 tttttgtgtcaatacctcattttctttgtaaaattttgacaatcttaaaagttgtcatataaatggatgttcaaaaaacacaactc 33603168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 331 - 478
Target Start/End: Original strand, 6271380 - 6271527
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||||||| | ||||||||| ||||||||||||||    |||||| ||||||||| |||||| ||||||||  || |||||||||| |    
T  6271380 acaacttttgtgacaatttttt-tcttatacttacattatgtttttactttctctctctattgttttggtttttgtgtcaata--tctttttctttgt-a 6271475  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaa 478  Q
    |||| || | || ||||||||||||||   ||| | ||||||||||||||||    
T  6271476 aattatgatcgtatcaaaagttgtcattaaaatggttgttcaaataacacaa 6271527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 379 - 481
Target Start/End: Original strand, 277072 - 277174
Alignment:
Q  379 tctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaa 478  Q
    ||||| ||||| |||  ||||| ||||||||  |||||||||||||||||||||||||||| ||||| ||||||| | ||   ||||| |||||||||||    
T  277072 tctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttggttgtcacaaaaattgtcatctaaaggaatgtttaaataacacaa 277171  T
Q  479 ctc 481  Q
    |||    
T  277172 ctc 277174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 333 - 481
Target Start/End: Complemental strand, 21968931 - 21968782
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact---ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaat 429  Q
    ||||||| ||| || ||| ||| ||||||||||||||||||||  ||   |||  |||||||||||||||| || |||||||||||||| || ||||| |    
T  21968931 aatttttatgataactttctcttttatactcacattatgttttaccttttctcactattgttttagtttttgtgccaatacctcattttattcgtaaatt 21968832  T
Q  430 tttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||| |||||||||||  || |||  | ||| ||| |||||||||||||||||    
T  21968831 ttttgttgtctcaaa--ttatcaaataaatggatcttcaaataacacaactc 21968782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 31883345 - 31883191
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||||| |||| |||  |||| |||||||||| |||| ||||||    |||| ||||| |||  ||||| |||||| ||||| ||||||||||||    
T  31883345 acaacttttgtaacaacttttcctctcatactcacatcatgtatttactttctctctctattgctttgatttttgtgtcaagacctctttttctttgtaa 31883246  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||| |||||||| ||||| ||||||    ||||| ||||||||||| |||||||    
T  31883245 aattatggttgtcccaaaaattgtcaatcaaatagttgttcaaataatacaactc 31883191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 331 - 428
Target Start/End: Original strand, 13422998 - 13423099
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||||||||||||||| ||| ||||| ||||||||||||| ||||||    |||||| |||| ||||||||||| || |||||| |  ||||||||||||    
T  13422998 acaatttttgtgacaactttctctctcatactcacattatatttttactttctctctctattattttagtttttgtgccaatacatatttttctttgtaa 13423097  T
Q  427 aa 428  Q
    ||    
T  13423098 aa 13423099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 378 - 481
Target Start/End: Original strand, 24900854 - 24900957
Alignment:
Q  378 ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    |||||| ||||| ||| |||||| || ||||  ||||||||||||||||||||||  ||||  |||| |||||||| | ||  |||||||||||||||||    
T  24900854 ctctctctattgctttggtttttgtgccaatcactcattttctttgtaaaattttaattgttgcaaatgttgtcatataaaatgatgttcaaataacaca 24900953  T
Q  478 actc 481  Q
    ||||    
T  24900954 actc 24900957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 404 - 478
Target Start/End: Complemental strand, 30423517 - 30423443
Alignment:
Q  404 tcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaa 478  Q
    ||||||||||||||||||| ||||  |||| |||| ||||||||| |||  | ||||||||||||||||||||||    
T  30423517 tcaatacctcattttctttataaagctttgattgtatcaaaagttatcacataaatagatgttcaaataacacaa 30423443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 396 - 481
Target Start/End: Complemental strand, 13689967 - 13689882
Alignment:
Q  396 tttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||| |||||||||||||||| |||| ||||||||| ||||||  |||| ||||||  |  || |||||||||||||||||||||    
T  13689967 tttttgtgtcaatacctcatttcctttataaaattttagttgtcgtaaaaattgtcacatatatggatgttcaaataacacaactc 13689882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 301 - 481
Target Start/End: Complemental strand, 17182007 - 17181823
Alignment:
Q  301 gagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacatt--atgtttttactct--ctatattgttttagt 396  Q
    |||||||||||||| ||||| ||       |||| |||||| |||| ||| | ||| |||||||||||  || |||||||| |  || ||||| ||||||    
T  17182007 gagaaatgatatttaaacaaccatttttgaacaacttttgtaacaactttctatctcatactcacattttatatttttactttaactctattgctttagt 17181908  T
Q  397 ttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||||||| ||||| ||||||| || || |||||  ||||||||| |  | ||| | |||| ||||||||||||||    
T  17181907 ttttatgtcaatacctctttttcattgtaaatttatgattgtcataaaagttgttacctaaatggttgtttaaataacacaactc 17181823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 385 - 481
Target Start/End: Complemental strand, 34048722 - 34048626
Alignment:
Q  385 tattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||| |||||  ||||||||||| |||||||||||||| || ||| |||| | |||||||| ||   ||| | |||||||||||||||||||    
T  34048722 tattgttttggttttattgtcaataccttattttctttgtaaatttatggatgtccccaaagttgtaattaaaatggttgttcaaataacacaactc 34048626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 336 - 481
Target Start/End: Complemental strand, 2060670 - 2060521
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttac--tctctatattgttttagtttttatgtcaatac--ctcattttctttgtaaaattt 431  Q
    |||| |||||| ||| ||||| ||||||||||||| |||||||  ||||| ||||| ||| |||||| ||  ||||   |||||||||||| | |  |||    
T  2060670 ttttatgacaactttttctctcatactcacattatatttttaccttctctctattgctttggtttttgtgctaatatatctcattttctttattatgttt 2060571  T
Q  432 tggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||| |||| || || ||| ||| ||||||||||||||| |||||    
T  2060570 tggttgtctaaaaaattatcgtgtaaatggatgttcaaataacataactc 2060521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 331 - 377
Target Start/End: Complemental strand, 5570375 - 5570329
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta 377  Q
    |||||||||||||||||||| ||||| ||||||||||||| ||||||    
T  5570375 acaatttttgtgacaattttctctctcatactcacattatattttta 5570329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 352 - 450
Target Start/End: Original strand, 34851541 - 34851639
Alignment:
Q  352 tctcttatactcacattatgtttttactctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgt 450  Q
    ||||| |||||| | ||||||| ||||||||| |||| ||||||||||| ||| ||||  |   ||||||||||||  ||||||||||||| |||||||    
T  34851541 tctctgatactctcgttatgttcttactctctttattattttagtttttgtgttaatatatacatttctttgtaaatctttggttgtctcataagttgt 34851639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 1156750 - 1156903
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||||||| |||||| | | ||||||||||||||| ||||||||    |||| ||||  ||| |||||| || || || ||||||| ||||  ||    
T  1156750 acaacttttgtgataatttttttt-ttatactcacattatttttttactttctctctctattactttggtttttgtgccactatctcatttcctttacaa 1156848  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||| ||||| |||||||| |||  |  || |||||||||||||||||||||    
T  1156849 aattttgattgtcacaaaagttatcaaatatatggatgttcaaataacacaactc 1156903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 452
Target Start/End: Complemental strand, 2689105 - 2688982
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttt--ttactctctatattgttttagtttttatgtcaatacct-cattttctttgtaaa 427  Q
    |||||||||||||||| ||| ||||| ||||||||||||| |||  ||  ||||| ||||||||| |||| | ||  ||||||| | |||||||| | ||    
T  2689105 acaatttttgtgacaactttctctctcatactcacattatttttactttatctctctattgttttggtttatgtgcaaatacctactttttctttat-aa 2689007  T
Q  428 attttggttgtctcaaaagttgtca 452  Q
    ||| |||||||| ||||||||||||    
T  2689006 attatggttgtcacaaaagttgtca 2688982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 378 - 491
Target Start/End: Complemental strand, 20998136 - 20998023
Alignment:
Q  378 ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    |||||| ||||| ||| |||||| | |||||||||||||||||||||||| || | |||||| || | ||||| ||   ||| | ||||||||||| |||    
T  20998136 ctctctctattgctttggtttttgtatcaatacctcattttctttgtaaatttatagttgtcccatacgttgttattaaaatggttgttcaaataaaaca 20998037  T
Q  478 actcgtttaaatat 491  Q
    |||  |||||||||    
T  20998036 actgttttaaatat 20998023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 331 - 379
Target Start/End: Original strand, 1376394 - 1376442
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    |||| ||||||||||| ||| ||||||||||||||||||| ||||||||    
T  1376394 acaacttttgtgacaactttctctcttatactcacattatatttttact 1376442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 331 - 379
Target Start/End: Original strand, 1384142 - 1384190
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    |||| ||||||||||| ||| ||||||||||||||||||| ||||||||    
T  1384142 acaacttttgtgacaactttctctcttatactcacattatatttttact 1384190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 331 - 439
Target Start/End: Complemental strand, 8098637 - 8098527
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||  ||||||||||| | ||||||||    |||| ||||| ||| |||||| ||||| ||||| |||| |||| |||    
T  8098637 acaacttttgtgacaactttctctc--atactcacattttctttttactttctctctctattgctttggtttttgtgtcactaccttatttcctttctaa 8098540  T
Q  427 aattttggttgtc 439  Q
    |||||||||||||    
T  8098539 aattttggttgtc 8098527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 392 - 427
Target Start/End: Complemental strand, 19367665 - 19367630
Alignment:
Q  392 ttagtttttatgtcaatacctcattttctttgtaaa 427  Q
    ||||||||||||||||||||||||||||||| ||||    
T  19367665 ttagtttttatgtcaatacctcattttctttataaa 19367630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 333 - 452
Target Start/End: Complemental strand, 5522677 - 5522556
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttac--tctctatattgttttagtttttatgtcaatacctcattttctttgtaaaatt 430  Q
    |||||||||||||| ||| ||||| ||| |||||||||  ||||||  ||||| ||||| ||| |||||| ||  |||||||  ||| |||| |||| ||    
T  5522677 aatttttgtgacaactttatctctcatattcacattatacttttactttctctctattgctttggtttttgtgctaatacctactttcctttataaattt 5522578  T
Q  431 ttggttgtctcaaaagttgtca 452  Q
     |||||||  ||||||||||||    
T  5522577 atggttgttccaaaagttgtca 5522556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 383
Target Start/End: Complemental strand, 11743013 - 11742972
Alignment:
Q  342 gacaattttgtctcttatactcacattatgtttttactctct 383  Q
    ||||||||| ||||| ||||||||||||| ||||||||||||    
T  11743013 gacaattttttctctcatactcacattatatttttactctct 11742972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 415 - 476
Target Start/End: Original strand, 33657006 - 33657067
Alignment:
Q  415 ttttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacac 476  Q
    ||||| |||||||||| |||||||| ||||| | ||||  ||||||| ||||||||||||||    
T  33657006 ttttcgttgtaaaattatggttgtcacaaaaatggtcacatgaatagttgttcaaataacac 33657067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 7e-39; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 40417805 - 40417957
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttactctctat----attgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||||||||||||||| ||| ||| |||  ||||||||||||||||||| ||| |    |||| ||| |||||||||||||||||||| |||||||||||    
T  40417805 acaatttttgtgacaactttttctatta--ctcacattatgtttttactttctttctctattgctttggtttttatgtcaatacctcactttctttgtaa 40417902  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||||||||||||||| | | |||||||||||||||||||||||||    
T  40417903 aattttggttgtctcaaaagttgtcgtataaatagatgttcaaataacacaactc 40417957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 395 - 481
Target Start/End: Complemental strand, 46022241 - 46022155
Alignment:
Q  395 gtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  46022241 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 46022155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 48062086 - 48062240
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||||| |||| ||| ||||||||||||| ||||||||||||||    |||| ||||||||| |||||| ||||||||||||||||||||| |||    
T  48062086 acaacttttgtaacaactttctctcttatactcatattatgtttttactttctctctctattgttttggtttttgtgtcaatacctcattttctttataa 48062185  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||| ||||||||||| || |||    ||  |||||||||||||||||||||    
T  48062186 aattttgattgtctcaaaaattatcactcaaacggatgttcaaataacacaactc 48062240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 336 - 481
Target Start/End: Complemental strand, 3937158 - 3937011
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttactct--ctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttg 433  Q
    ||||||||||| ||| ||||| ||||||||||||| |||||||| |  || ||||  ||| |||||| || ||||||||||||| |||| ||||||||||    
T  3937158 ttttgtgacaactttctctctcatactcacattatctttttactttatctctattactttggtttttgtgccaatacctcatttcctttataaaattttg 3937059  T
Q  434 gttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||| ||||||||||||  || || |||||||||||||||||||||    
T  3937058 gttgtcacaaaagttgtcacatgtatggatgttcaaataacacaactc 3937011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 395 - 481
Target Start/End: Original strand, 7701641 - 7701727
Alignment:
Q  395 gtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  7701641 gtttttgtgtcaatacctcattttctttataaaactttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 7701727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 300 - 478
Target Start/End: Original strand, 42552898 - 42553078
Alignment:
Q  300 agagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttactctctatat--tgttttagtt 397  Q
    |||||||||||||||  |||||||       ||||||||||| |||| |||  |||| ||| ||| |||||||||||||||||| | |  |||||| |||    
T  42552898 agagaaatgatatttgtacaatcatttttatacaatttttgtaacaactttccctctcatattcatattatgtttttactctctctctgttgttttggtt 42552997  T
Q  398 tttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaa 478  Q
    ||| || ||||||||| |||||||||||||||| ||||| ||||||||||| |||  | ||| | ||||||||||||||||    
T  42552998 tttgtgccaatacctctttttctttgtaaaattatggttttctcaaaagttatcaattaaatggttgttcaaataacacaa 42553078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 379 - 481
Target Start/End: Complemental strand, 25192907 - 25192805
Alignment:
Q  379 tctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaa 478  Q
    ||||| ||||||||| |||||| ||||| ||||||||||||||||||||||||| |||||| ||||||||||||  || ||  || ||||||||||||||    
T  25192907 tctctctattgttttggtttttgtgtcactacctcattttctttgtaaaattttagttgtcacaaaagttgtcacatgtatgaatattcaaataacacaa 25192808  T
Q  479 ctc 481  Q
    |||    
T  25192807 ctc 25192805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 333 - 448
Target Start/End: Complemental strand, 41189583 - 41189464
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||||||||||||| ||| | ||| ||||||||||||| ||||||||    |||| ||||| |||||||||| |||||||||||||||| ||||||||||    
T  41189583 aatttttgtgacaactttctttctcatactcacattatctttttactttctctctctattgctttagtttttgtgtcaatacctcatttcctttgtaaaa 41189484  T
Q  429 ttttggttgtctcaaaagtt 448  Q
    ||||| |||||  |||||||    
T  41189483 ttttgattgtcataaaagtt 41189464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 43025369 - 43025523
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||||||||||||||| ||| ||||| ||||||| ||||| ||||||||    |||| ||||| ||| |||||| || || || ||||||| ||||||||    
T  43025369 acaatttttgtgacaactttatctctcatactcatattatctttttactttttctctctattgctttggtttttgtgccactatctcatttcctttgtaa 43025468  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||| |||||  ||||||||||||  |  |||||||||| |||||||||||||    
T  43025469 aattttagttgttacaaaagttgtcacatatatagatgttcgaataacacaactc 43025523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 352 - 481
Target Start/End: Complemental strand, 38956639 - 38956506
Alignment:
Q  352 tctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagt 447  Q
    ||||| ||||||||||||| ||||||||    |||| ||||| |||  ||||| || || |||||||||| ||||||||||||||||||||| |||||||    
T  38956639 tctctcatactcacattatctttttactttctctctctattgctttgttttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagt 38956540  T
Q  448 tgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||  |  || |||||||||||||||||||||    
T  38956539 tgtcacatatatggatgttcaaataacacaactc 38956506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 299 - 476
Target Start/End: Complemental strand, 44649399 - 44649221
Alignment:
Q  299 tagagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttactctctatattgt--tttagt 396  Q
    |||||||||||||||| ||||| ||       ||||||||| |||||| ||  ||||  ||||| |||||||||||||||| ||| | || |  ||| ||    
T  44649399 tagagaaatgatatttgaacaaccaatttttgacaatttttatgacaacttc-tctcacatacttacattatgtttttactttctctcttttactttggt 44649301  T
Q  397 ttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacac 476  Q
    |||| ||||||||  | ||||||||| ||||||||| |||||||||||||||||||||  |||||||||| |||||||||    
T  44649300 ttttgtgtcaatatttaattttctttataaaattttagttgtctcaaaagttgtcatgaaaatagatgtttaaataacac 44649221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 352 - 463
Target Start/End: Complemental strand, 22925303 - 22925190
Alignment:
Q  352 tctcttatactcacattatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttg 449  Q
    ||||| |||||||||||||||||||| |  |||||||||| |||| ||||| |||||||| || |||||| |||||||||||||||||| |||||| |||    
T  22925303 tctctcatactcacattatgtttttaatttctctatattgctttaatttttgtgtcaatatcttattttccttgtaaaattttggttgtttcaaaaattg 22925204  T
Q  450 tcatgtgaatagat 463  Q
    | || | |||||||    
T  22925203 tgatataaatagat 22925190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 396 - 481
Target Start/End: Complemental strand, 35072335 - 35072250
Alignment:
Q  396 tttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||| |||||||  |||||||||||| ||||||||||||||| |||||||||||||| | ||| |||||||| ||||||||||||    
T  35072335 tttttgtgtcaatgtctcattttctttataaaattttggttgtttcaaaagttgtcatataaatggatgttcagataacacaactc 35072250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 358 - 446
Target Start/End: Original strand, 30064497 - 30064587
Alignment:
Q  358 atactcacattatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaag 446  Q
    ||||||||||||||||||||||  |||| ||||| |||  |||| |||||||||| |||||||||||||||||||||  ||||||||||||    
T  30064497 atactcacattatgtttttactttctctctattgctttgattttcatgtcaatacatcattttctttgtaaaattttaattgtctcaaaag 30064587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 331 - 422
Target Start/End: Complemental strand, 34108896 - 34108805
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttactctctatattgttttagtttttatgtcaatacctcattttcttt 422  Q
    |||| ||||||||||||||| ||||| |||||||||||||||||||||||||| || || |||  ||||| ||||||||| | |||||||||    
T  34108896 acaacttttgtgacaattttctctctcatactcacattatgtttttactctctctactgctttgatttttgtgtcaatacatgattttcttt 34108805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 359 - 463
Target Start/End: Complemental strand, 41863641 - 41863535
Alignment:
Q  359 tactcacattatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtg 456  Q
    ||||||||||||||||||| |  |||| ||||| |||  ||||| || |||||||||||||| |||||||||||||| |||||| |||||||||||| |     
T  41863641 tactcacattatgtttttaatttctctttattgctttgttttttgtgccaatacctcattttatttgtaaaattttgattgtcttaaaagttgtcatata 41863542  T
Q  457 aatagat 463  Q
    |||||||    
T  41863541 aatagat 41863535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 331 - 477
Target Start/End: Original strand, 20337340 - 20337490
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcatt-ttctttgta 425  Q
    ||||||||| ||| |||||| ||||| ||| ||||||||| ||||||||    || | |||||||||| |||||||||||| || ||||| |||||||||    
T  20337340 acaatttttatgataattttctctctcatattcacattatatttttactttatctttctattgttttaatttttatgtcaacac-tcattgttctttgta 20337438  T
Q  426 aaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    || || ||||| ||||| ||||||||||   ||||| |||||||||||||||    
T  20337439 aatttatggttatctcataagttgtcatacaaatagttgttcaaataacaca 20337490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 358 - 481
Target Start/End: Complemental strand, 35628035 - 35627908
Alignment:
Q  358 atactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcat 453  Q
    ||||||||||||||||||||||    |||  ||||| ||| |||||| |||||||||||| |||||||| ||||||| ||||| ||||||||||| |||     
T  35628035 atactcacattatgtttttactttatctccttattgctttggtttttgtgtcaatacctctttttctttataaaattatggttatctcaaaagttatcaa 35627936  T
Q  454 gtgaatagatgttcaaataacacaactc 481  Q
        |||| |||||||||||||||||||    
T  35627935 tcagatagttgttcaaataacacaactc 35627908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 3614403 - 3614334
Alignment:
Q  412 tcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||| ||||||||||||||||||||| |||||||||||||| | ||| ||||||||||||||| |||||    
T  3614403 tcattgtctttgtaaaattttggttgtttcaaaagttgtcatataaatggatgttcaaataacataactc 3614334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 31445347 - 31445501
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| | | | ||||||||||||| ||||||||    |||| ||||| |||  ||||| |||||||  ||||||||||||||||    
T  31445347 acaacttttgtgacaactttctttttcatactcacattatatttttactttctctctctattgctttgatttttgtgtcaatcactcattttctttgtaa 31445446  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||| ||||  ||||| || |||| | ||  |||||||||||||||||||||    
T  31445447 aattttgattgttgcaaaaattatcatataaaatgatgttcaaataacacaactc 31445501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 396 - 481
Target Start/End: Complemental strand, 35098676 - 35098591
Alignment:
Q  396 tttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||| |||||||  |||||||||| | ||||||||||||||| |||||||||||||| | ||| ||| |||||||||||||||||    
T  35098676 tttttgtgtcaatgtctcattttctatataaaattttggttgtttcaaaagttgtcatataaatggatattcaaataacacaactc 35098591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 41018693 - 41018847
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| | ||| ||||||||||||| ||||||||    |||| ||||  ||| |||||| ||| |||||||| ||||||||||||    
T  41018693 acaacttttgtgacaactttctatctcatactcacattatatttttactttctctctctattactttggtttttgtgttaatacctctttttctttgtaa 41018792  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    | || || |||||  |||||||||||  | ||||| | |||||||||||||||||    
T  41018793 atttatgattgtcataaaagttgtcacctaaatagttattcaaataacacaactc 41018847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 44895614 - 44895460
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| | ||| ||| |||| |||| ||||||||    |||| ||||| ||| |||||| || || |||||||||| ||||||||    
T  44895614 acaacttttgtgacaactttctatctcatattcacgttatctttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaa 44895515  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||| |||||||||| |  |  || ||||||||||||||| |||||    
T  44895514 aattttggttgtcacaaaagttgttacatatatggatgttcaaataacataactc 44895460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 343 - 481
Target Start/End: Complemental strand, 41989772 - 41989628
Alignment:
Q  343 acaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttcttt--gtaaaattttggtt 436  Q
    |||| ||| ||||| ||||||||||||| ||||||||    |||| ||||| ||| |||||| || || ||||||||||| |||  ||||||||||||||    
T  41989772 acaactttctctctcatactcacattatatttttactttctctctttattgctttggtttttgtgccactacctcattttttttttgtaaaattttggtt 41989673  T
Q  437 gtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||| |||||||| |||  |  || |||||||||||||||||||||    
T  41989672 gtcacaaaagttatcacatatatggatgttcaaataacacaactc 41989628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 22918160 - 22918057
Alignment:
Q  378 ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    |||||| ||||| ||| |||||| || || |||||||||| ||||||||||||||| ||||| ||||||||||||  || || |||| |||||||| |||    
T  22918160 ctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttgattgtcgcaaaagttgtcacatgtatggatgctcaaataataca 22918061  T
Q  478 actc 481  Q
    ||||    
T  22918060 actc 22918057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 333 - 481
Target Start/End: Complemental strand, 24614356 - 24614204
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    ||||||||||| |||||| | ||| |||||||||||||  |||||    ||| || ||||| ||| |||||| ||||| |||||||||| ||||||||||    
T  24614356 aatttttgtgataattttctttctcatactcacattatcattttattttctcactctattgctttggtttttgtgtcactacctcatttcctttgtaaaa 24614257  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||| || || |||||||| |||  |  ||  ||||||||||||||||||||    
T  24614256 ttttgattatcacaaaagttatcacatatatgaatgttcaaataacacaactc 24614204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 397 - 479
Target Start/End: Original strand, 32803788 - 32803870
Alignment:
Q  397 ttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaac 479  Q
    |||||||||||||| | ||||| | |||||||||||  |||| |||||||||||||| | ||| |||||||||||||||||||    
T  32803788 ttttatgtcaatactttattttttatgtaaaattttaattgtttcaaaagttgtcatataaatggatgttcaaataacacaac 32803870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 364 - 490
Target Start/End: Complemental strand, 33578323 - 33578195
Alignment:
Q  364 acattatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatag 461  Q
    ||||||| ||||||||  |||| |||| |||| |||||| | |||||  |||||||||||||||||||||| |||||  |||| |||||||| | ||  |    
T  33578323 acattatatttttactttctctctattattttggtttttgtatcaatcactcattttctttgtaaaattttagttgttgcaaaggttgtcatataaaatg 33578224  T
Q  462 atgttcaaataacacaactcgtttaaata 490  Q
    |  ||||||||||||||||| ||||||||    
T  33578223 acattcaaataacacaactcttttaaata 33578195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 385 - 481
Target Start/End: Original strand, 9428503 - 9428599
Alignment:
Q  385 tattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||||| |||||||   ||||||||||||||||| | |||||||| || ||| ||| ||| |||| | |||| ||||||||||||||||||||    
T  9428503 tattgttttaatttttatacaaatacctcattttctttattaaattttgattatctaaaatgttatcatataaataaatgttcaaataacacaactc 9428599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 38340424 - 38340323
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttac----tctctatattgttttagtttttatgtc-aatacctcattttctttgta 425  Q
    |||| ||||||||||| ||| ||||| |||||||||||||||||||||    ||||| ||||||||| |||||| | || || |||||||||||||||||    
T  38340424 acaacttttgtgacaactttatctctcatactcacattatgtttttactttttctctctattgttttggtttttgtctcaaacacctcattttctttgta 38340325  T
Q  426 aa 427  Q
    ||    
T  38340324 aa 38340323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 345 - 481
Target Start/End: Original strand, 46094994 - 46095136
Alignment:
Q  345 aattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctca---ttttctttgtaaaattttggttg 437  Q
    |||||| ||||| ||||||| ||||| ||||||    |||||| |||||| || |||||| |||||||| || |   ||||||||||| | ||||| |||    
T  46094994 aattttttctctcatactcatattatatttttattttctctctctattgtattggtttttgtgtcaatatcttactattttctttgtata-ttttgattg 46095092  T
Q  438 tctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||| |||||||| | ||||||| |||||||||||||||||    
T  46095093 tctcaaaggttgtcatataaatagatattcaaataacacaactc 46095136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 336 - 480
Target Start/End: Complemental strand, 32529891 - 32529745
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttg 433  Q
    |||||| |||| ||| ||||| ||| ||| || || ||||||||  |||| ||||| ||| |||||| | ||| |||||||||| |||||||||||||||    
T  32529891 ttttgtaacaactttctctctcatattcagatgatctttttactttctctttattgctttggtttttttatcactacctcatttcctttgtaaaattttg 32529792  T
Q  434 gttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaact 480  Q
     ||||| ||||| ||||||  |  || |||| |||||||||||||||    
T  32529791 attgtcacaaaaattgtcacatatatggatgctcaaataacacaact 32529745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 358 - 481
Target Start/End: Original strand, 1284472 - 1284597
Alignment:
Q  358 atactcacattatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgt 455  Q
    ||||| ||||||||||||||||  |||| ||||| |||| ||||| |||||||||| | ||||||||  ||| || || |||| ||||||||| ||||      
T  1284472 atacttacattatgtttttactttctctctattgctttaatttttgtgtcaataccactttttcttttcaaatttatgattgtatcaaaagttatcataa 1284571  T
Q  456 gaatagatgttcaaataacacaactc 481  Q
     ||| | |||||||||||||||||||    
T  1284572 aaatggttgttcaaataacacaactc 1284597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 333 - 379
Target Start/End: Complemental strand, 24532982 - 24532936
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  24532982 aatttttgtgacaattttttctctcatactcacattatgtttttact 24532936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 414 - 480
Target Start/End: Original strand, 38944913 - 38944979
Alignment:
Q  414 attttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaact 480  Q
    |||||||||||||||||||| |||||| |||||||||||| | |||  ||||| |||||||||||||    
T  38944913 attttctttgtaaaattttgattgtcttaaaagttgtcatataaatgaatgtttaaataacacaact 38944979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 301 - 481
Target Start/End: Complemental strand, 43159646 - 43159463
Alignment:
Q  301 gagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagt 396  Q
    |||||||||||||| ||||| ||       |||||||||||||||| ||| | ||| ||||||  ||||| ||||||||    |||| ||||| ||| ||    
T  43159646 gagaaatgatatttgaacaaccattttttaacaatttttgtgacaactttctatctcatactcgtattatatttttactttctctctctattgctttggt 43159547  T
Q  397 ttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||  | |||||||||| ||||||||||||| || ||||||||   ||||||||||  | ||| | |||||||||||||||||||    
T  43159546 tttg-tatcaatacctctttttctttgtaaatttatggttgtcatcaaagttgtcacctaaatggttgttcaaataacacaactc 43159463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 402 - 478
Target Start/End: Original strand, 35207605 - 35207679
Alignment:
Q  402 tgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaa 478  Q
    ||||||||| ||||||| |||||||||||||||||||||||||  || || | | ||| ||||||||||||||||||    
T  35207605 tgtcaatacttcattttatttgtaaaattttggttgtctcaaa--ttatcctataaatggatgttcaaataacacaa 35207679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 378 - 439
Target Start/End: Original strand, 38073300 - 38073361
Alignment:
Q  378 ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtc 439  Q
    |||||| ||||| ||| |||||| || ||||||||||||| |||||||||||||||||||||    
T  38073300 ctctctctattgctttggtttttgtgccaatacctcatttcctttgtaaaattttggttgtc 38073361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 336 - 422
Target Start/End: Original strand, 38259098 - 38259186
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttac--tctctatattgttttagtttttatgtcaatacctcattttcttt 422  Q
    ||||||||||| ||| ||| | ||||| |||||||||||||||  ||||| |||||||||  ||||| |||||||||||| ||||||||    
T  38259098 ttttgtgacaactttctctttcatactaacattatgtttttactttctctctattgttttgatttttgtgtcaatacctctttttcttt 38259186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 335 - 445
Target Start/End: Original strand, 38347577 - 38347691
Alignment:
Q  335 tttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaatt 430  Q
    |||||||||||| ||| ||||| ||||||| ||||| ||||||||    |||| |||| ||||| ||||| ||  ||||| | |||||||||||||||||    
T  38347577 tttttgtgacaactttttctctaatactcatattatctttttactttttctctctattattttaatttttgtgctaatactttattttctttgtaaaatt 38347676  T
Q  431 ttggttgtctcaaaa 445  Q
    ||| || ||||||||    
T  38347677 ttgattatctcaaaa 38347691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 40112996 - 40112842
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    ||||||||||||| |||||| ||||| ||| | | ||||| ||||||||    |||| ||||| ||| |||||| || || ||||| |||| ||||||||    
T  40112996 acaatttttgtgagaattttctctctcatatttatattatctttttactttctctctctattgctttggtttttgtgccactaccttatttcctttgtaa 40112897  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||| |||||  | ||||||| |  |  || |||||||||||||||||||||    
T  40112896 aattttgattgtcagagaagttgttacatatatggatgttcaaataacacaactc 40112842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 483
Target Start/End: Original strand, 27568047 - 27568206
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctc---attttctttg 423  Q
    |||| ||||||||||| ||| | ||| ||||||| ||||||||||||    |||||| ||||||||| |||||| ||||||||| ||    |||| ||||    
T  27568047 acaacttttgtgacaactttatttctcatactcatattatgtttttactttctctctctattgttttggtttttgtgtcaatacatctattttttttttg 27568146  T
Q  424 taaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactcgt 483  Q
    ||||||| |||||||| || ||||||| |    |||   |||||||||||||||||||||    
T  27568147 taaaattatggttgtcccagaagttgttaataaaatgattgttcaaataacacaactcgt 27568206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 428
Target Start/End: Complemental strand, 41430193 - 41430092
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttac----tctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||||||||||||||||| |||||||    ||||| ||||| ||| |||||  ||||||||  | |||||||||||||    
T  41430193 acaacttttgtgacaactttctctcttatactcacattatatttttactttatctctctattgctttggttttcgtgtcaatatatgattttctttgtaa 41430094  T
Q  427 aa 428  Q
    ||    
T  41430093 aa 41430092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 409 - 481
Target Start/End: Original strand, 43942743 - 43942815
Alignment:
Q  409 acctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||||||||||||||||||| | ||||| || |||  |  || |||||||||||||||||||||    
T  43942743 acctcattttctttgtaaaattttggttgccacaaaaattatcacatatatggatgttcaaataacacaactc 43942815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 337 - 409
Target Start/End: Complemental strand, 31274576 - 31274500
Alignment:
Q  337 tttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaata 409  Q
    |||||||||| ||| ||||||||||||||| | | ||||||||    |||| |||||||||||||||||||||||||    
T  31274576 tttgtgacaactttttctcttatactcacactttatttttactttctctctctattgttttagtttttatgtcaata 31274500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 331 - 439
Target Start/End: Original strand, 38861125 - 38861237
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||| |||||| || ||||| ||||||||    |||| ||||||||| |||||| || || ||||| |||| ||||||||    
T  38861125 acaacttttgtgacaactttctcttttatacccaaattatctttttactttctctctctattgttttggtttttgtgccactaccttatttactttgtaa 38861224  T
Q  427 aattttggttgtc 439  Q
    ||||||| |||||    
T  38861225 aattttgattgtc 38861237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 333 - 379
Target Start/End: Complemental strand, 18111651 - 18111605
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    |||||||||||||||||| ||||| ||||||||||||| ||||||||    
T  18111651 aatttttgtgacaattttctctctcatactcacattatatttttact 18111605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 333 - 379
Target Start/End: Complemental strand, 38940019 - 38939973
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    ||||||||| |||||||| ||||||||||||| ||||||||||||||    
T  38940019 aatttttgtaacaattttttctcttatactcatattatgtttttact 38939973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 379
Target Start/End: Original strand, 34978296 - 34978374
Alignment:
Q  301 gagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    |||||||||||||| ||||||||       |||||||||||||||| ||| ||||| |||||||||||||  |||||||    
T  34978296 gagaaatgatatttgaacaatcactttttgacaatttttgtgacaactttctctctcatactcacattatccttttact 34978374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 345 - 450
Target Start/End: Original strand, 36207081 - 36207188
Alignment:
Q  345 aattttgtctcttatactcacattatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctca 442  Q
    |||||| ||| | ||||| |||||| ||||||| |  |||| ||||||||| |||||| || ||||| || |||||||||||||| |||| |||||| ||    
T  36207081 aattttttctttcatacttacattacgtttttagtttctctctattgttttggtttttctgccaatatcttattttctttgtaaattttttgttgtccca 36207180  T
Q  443 aaagttgt 450  Q
    ||| ||||    
T  36207181 aaaattgt 36207188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 397 - 481
Target Start/End: Original strand, 39110963 - 39111046
Alignment:
Q  397 ttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||| ||||||||| |||||||| ||||||| || || |||||||| ||||||||||   ||||  |||||||||||||||||||    
T  39110963 ttttttgtcaatacttcattttcattgtaaa-ttatgattgtctcataagttgtcattaaaataattgttcaaataacacaactc 39111046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 331 - 383
Target Start/End: Original strand, 40507159 - 40507210
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttactctct 383  Q
    ||||||||| |||||||||| ||||||||||||| |||||||||||| |||||    
T  40507159 acaattttt-tgacaattttctctcttatactcatattatgtttttattctct 40507210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 40854696 - 40854648
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    |||| ||||||||||||||| ||||| ||||||||||||| ||||||||    
T  40854696 acaacttttgtgacaattttctctctcatactcacattatatttttact 40854648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 370
Target Start/End: Complemental strand, 5174593 - 5174554
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattat 370  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  5174593 acaatttttgtgacaactttctctcttatactcacattat 5174554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 385 - 448
Target Start/End: Original strand, 11325988 - 11326051
Alignment:
Q  385 tattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagtt 448  Q
    ||||||||| || ||| |||||||| ||| |||||||||||||||| |  ||||||||||||||    
T  11325988 tattgtttttgtgtttgtgtcaatatctctttttctttgtaaaattataattgtctcaaaagtt 11326051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 336 - 383
Target Start/End: Original strand, 34264617 - 34264664
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttactctct 383  Q
    ||||||||||| |||  ||||||||||||||||||||||||| |||||    
T  34264617 ttttgtgacaactttcgctcttatactcacattatgtttttattctct 34264664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 336 - 448
Target Start/End: Complemental strand, 44189347 - 44189231
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattt 431  Q
    ||||||| ||| ||| ||||| ||||||||||||| ||||||    |||||| ||||  ||| |||||| ||||| || ||||||| ||||| ||| |||    
T  44189347 ttttgtgtcaactttctctctcatactcacattatctttttactttctctctctattactttggtttttgtgtcactaactcatttcctttgaaaatttt 44189248  T
Q  432 tggttgtctcaaaagtt 448  Q
    || ||||| ||||||||    
T  44189247 tgattgtcacaaaagtt 44189231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 395 - 481
Target Start/End: Original strand, 17002434 - 17002519
Alignment:
Q  395 gtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||| |||||||  |||||||||||| ||||| |||||||||  ||||  ||||||| | ||  |||||||||||||||||||||    
T  17002434 gtttttgtgtcaatcactcattttctttataaaa-tttggttgttgcaaagattgtcatataaaatgatgttcaaataacacaactc 17002519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 300 - 379
Target Start/End: Original strand, 47448825 - 47448904
Alignment:
Q  300 agagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    ||||||||||||||| ||||| ||       |||| ||||||||||| ||| ||||| ||||||||||| ||||||||||    
T  47448825 agagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttctctctcatactcacattgtgtttttact 47448904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 376
Target Start/End: Original strand, 6269396 - 6269441
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttt 376  Q
    |||||||||||||||| ||| ||||| ||||||||||||| |||||    
T  6269396 acaatttttgtgacaactttctctctcatactcacattatattttt 6269441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 383
Target Start/End: Complemental strand, 27383994 - 27383913
Alignment:
Q  301 gagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttactctct 383  Q
    ||||||||||||||  |||||||       ||||||||||| | |||||| ||||||||||| |||||||||||||| |||||    
T  27383994 gagaaatgatatttgtacaatcactttagtacaatttttgt-ataattttctctcttatacttacattatgtttttattctct 27383913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 392 - 481
Target Start/End: Original strand, 28030970 - 28031057
Alignment:
Q  392 ttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||| ||| ||||||||||||||||||| ||||| || ||||| ||||| || ||||   ||||| ||||||||||| |||||||    
T  28030970 ttagtttttgtgttaatacctcattttctttgt-aaattatgattgtcccaaaa-ttatcattcaaatagttgttcaaataaaacaactc 28031057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 352 - 410
Target Start/End: Original strand, 41650758 - 41650818
Alignment:
Q  352 tctcttatactcacattatgtttttac--tctctatattgttttagtttttatgtcaatac 410  Q
    ||||| ||||||||||| |||||||||  ||||| ||||||||| |||||| |||||||||    
T  41650758 tctctcatactcacattttgtttttactttctctctattgttttggtttttgtgtcaatac 41650818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 385 - 426
Target Start/End: Complemental strand, 47145077 - 47145036
Alignment:
Q  385 tattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    ||||||||| |||||| ||| |||||||||||||||||||||    
T  47145077 tattgttttggtttttgtgttaatacctcattttctttgtaa 47145036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 47356013 - 47356167
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttactctcta----tattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||||||| |||||||||||| |||||| ||| |||| | ||    ||||||||| |||||| | ||||||| |  |||||||| |||    
T  47356013 acaaattttgtgacaattttatctcttatactctcattatatttctactttttatcactattgttttggtttttgtatcaatacatacttttctttataa 47356112  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |    |||||||| |  ||||||||||   ||| | |||| ||||||||||||||    
T  47356113 atcaatggttgtcccgtaagttgtcatacaaatggttgttaaaataacacaactc 47356167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 3e-38; HSPs: 87)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 31826980 - 31827134
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttac----tctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||||||||||||||| ||| ||||| |||||  ||||||||||||||    ||||| ||||| ||| |||||| |||||||| |||||||| |||||||    
T  31826980 acaatttttgtgacaactttctctctcatacttgcattatgtttttaccctttctctctattgatttggtttttgtgtcaataactcattttttttgtaa 31827079  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||||||| |||||||||||||| | |||||||||||||||||||||||||    
T  31827080 aattttggttgtatcaaaagttgtcatctaaatagatgttcaaataacacaactc 31827134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 299 - 481
Target Start/End: Complemental strand, 9567034 - 9566848
Alignment:
Q  299 tagagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttactctcta----tattgtttta 394  Q
    |||||||||||||||| ||||| ||       |||| ||||||||||| ||| ||||| |||||||||||||||||||||| |||     ||||| |||     
T  9567034 tagagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttctctctcatactcacattatgtttttactttctcactctattgctttg 9566935  T
Q  395 gtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||| | | |  ||||||||||||||||||||    
T  9566934 gtttttgtgtcaataccctattttctatgtaaaattttggttgtctcaaaagttgtcatataattgaatgttcaaataacacaactc 9566848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 18434824 - 18434978
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||| | | ||||||||||||||||||    |||| |||||||||  ||||| || |||||| |||||||||||| ||    
T  18434824 acaacttttgtgacaactttctctctcacattcacattatgtttttactttctctctttattgttttgatttttgtgccaatacatcattttctttgcaa 18434923  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||| ||||||||||||| | ||||||| |||||||||||||||||    
T  18434924 aattttggttgtcacaaaagttgtcatctaaatagattttcaaataacacaactc 18434978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 301 - 481
Target Start/End: Complemental strand, 19947812 - 19947632
Alignment:
Q  301 gagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttact--ctctatattgttttagttt 398  Q
    |||||||||||||| ||||| ||       |||| ||||||||||| ||| |||||||  || |||||||| |||||||  |||| ||||| ||| ||||    
T  19947812 gagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttctctctta--cttacattatgcttttactttctctctattgctttggttt 19947715  T
Q  399 ttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    || |  ||||||||| |||||||| |||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||    
T  19947714 ttgtcccaatacctccttttctttataaaattttggttgtctcaaaagttgtcatataaataaatgttcaaataacacaactc 19947632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 301 - 481
Target Start/End: Original strand, 649768 - 649952
Alignment:
Q  301 gagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagt 396  Q
    |||||||||||||| ||||| ||       |||| ||||||||||| ||| ||||| ||||||||||||| ||||||||    |||| ||||| ||| ||    
T  649768 gagaaatgatatttgaacaaccatttttttacaacttttgtgacaactttctctctcatactcacattatctttttactttctctctctattgctttggt 649867  T
Q  397 ttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||| ||||| |||||||||| ||||||||||||||||||||| ||||||||||||  |   | |||||||||||||||||||||    
T  649868 ttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatgtggatgttcaaataacacaactc 649952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 334 - 481
Target Start/End: Complemental strand, 18512382 - 18512231
Alignment:
Q  334 atttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaat 429  Q
    ||||||||||||| ||| | ||  ||||| ||| ||||||||||||    |||| ||||| |||||||||||||||||||||||||||||||| ||||||    
T  18512382 atttttgtgacaactttctatcacatacttacactatgtttttactttatctctctattgctttagtttttatgtcaatacctcattttctttataaaat 18512283  T
Q  430 tttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||| ||||||| |||| || |||| | ||| |||||| ||||||||||||||    
T  18512282 tttagttgtcttaaaaattatcatataaattgatgttgaaataacacaactc 18512231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 336 - 475
Target Start/End: Original strand, 50932340 - 50932481
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttactctctat--attgttttagtttttatgtcaatacctcattttctttgtaaaattttg 433  Q
    ||||||||||||||| ||||| |||||||||| || |||||||||||| |  |||| |||  ||||| |||||||||||||||| |||||||||||||||    
T  50932340 ttttgtgacaattttttctctcatactcacataatctttttactctctttctattgctttgatttttgtgtcaatacctcatttcctttgtaaaattttg 50932439  T
Q  434 gttgtctcaaaagttgtcatgtgaatagatgttcaaataaca 475  Q
    |||||  ||||||||||||  |  || |||||||||||||||    
T  50932440 gttgtaacaaaagttgtcacatatatggatgttcaaataaca 50932481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 19055801 - 19055647
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||| |||||| ||| ||||||||||||||||||  ||||||||    |||| ||||||||| |||||| || ||||| ||||||| ||||||||    
T  19055801 acaacttttatgacaactttctctcttatactcacattacctttttactttctctctctattgttttggtttttgtgacaatatctcatttcctttgtaa 19055702  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||| |||||| ||||||||||||  |  || |||||||||||||||||||||    
T  19055701 aattttagttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 19055647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 27465099 - 27464945
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||| |||||||||| || ||||||||    |||| ||||| ||| |||||| || || |||||||||| ||||||||    
T  27465099 acaacttttgtgacaactttctctctcatactcacatgatctttttactttgtctctctattgctttggtttttgtgccactacctcatttcctttgtaa 27465000  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||| ||||||||||||  |  || |||||||||||||||||||||    
T  27464999 aattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 27464945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 336 - 481
Target Start/End: Original strand, 31088215 - 31088364
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattt 431  Q
    |||||||| || ||| ||||| ||||||||||||| ||||||||    |||| ||||| ||| |||||| || || ||||||||||| ||||||||||||    
T  31088215 ttttgtgataactttttctctcatactcacattatctttttactttctctctctattgctttggtttttgtgccactacctcattttttttgtaaaattt 31088314  T
Q  432 tggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||| ||||||||||||  |  || |||||||||||||||||||||    
T  31088315 tggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 31088364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 337 - 482
Target Start/End: Original strand, 48470674 - 48470823
Alignment:
Q  337 tttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaatttt 432  Q
    |||||||||||||| ||||| ||||||||||||  ||||||||    |||| ||||||||| |||| | || ||||| ||||||| ||||||||||||||    
T  48470674 tttgtgacaattttctctctcatactcacattacctttttactttctctctctattgttttggtttctgtgccaatatctcatttcctttgtaaaatttt 48470773  T
Q  433 ggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactcg 482  Q
    | ||||| ||||||||||||  |  || ||||||||||||||||||||||    
T  48470774 gattgtcacaaaagttgtcacatatatggatgttcaaataacacaactcg 48470823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 331 - 480
Target Start/End: Complemental strand, 49065405 - 49065253
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    ||||| |||||||||| ||| ||| | ||||||||||||||||||||||    |||| ||||| ||| |||||| || |||||| |||||||||||||||    
T  49065405 acaatatttgtgacaacttt-tctttcatactcacattatgtttttactttctctctctattgctttggtttttgtgccaatacttcattttctttgtaa 49065307  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaact 480  Q
    |||||||||| |||  ||| ||||||| | ||||||| ||||||||||||||||    
T  49065306 aattttggttatctttaaaattgtcatataaatagatattcaaataacacaact 49065253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 396 - 486
Target Start/End: Original strand, 2571733 - 2571824
Alignment:
Q  396 tttttatgtcaatacctcattttctttgt-aaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactcgttta 486  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||||| ||||||||||||| || || ||||||||||||||||||||||||||    
T  2571733 tttttgtgtcactacctcattttctttgttaaaattttggttgtcacaaaagttgtcatatgcatggatgttcaaataacacaactcgttta 2571824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 390 - 481
Target Start/End: Original strand, 21401490 - 21401581
Alignment:
Q  390 ttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||| |||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||  | ||| |||||||||||||||||||||    
T  21401490 ttttggtttttgtgtcaatacctcattttctttgtaaaattttgattgtttcaaaagttgtcacataaatggatgttcaaataacacaactc 21401581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 336 - 475
Target Start/End: Original strand, 3851192 - 3851335
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattt 431  Q
    ||||||||||| ||| ||||| ||||||||||||| ||||||||    |||| ||||||||| |||||| ||||| |||||||||| |||| ||||||||    
T  3851192 ttttgtgacaactttctctctcatactcacattatctttttacttgatctctctattgttttggtttttctgtcactacctcatttcctttataaaattt 3851291  T
Q  432 tggttgtctcaaaagttgtcatgtgaatagatgttcaaataaca 475  Q
    ||||||||  |||||||||||  |  || |||||||||||||||    
T  3851292 tggttgtcataaaagttgtcacatatatggatgttcaaataaca 3851335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 334 - 481
Target Start/End: Original strand, 26469391 - 26469542
Alignment:
Q  334 atttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaat 429  Q
    |||||| |||||| ||| ||||||||| | ||||||| ||||||    |||||| ||||| ||  |||||| ||||| |||||||||| |||||||||||    
T  26469391 atttttatgacaactttctctcttatatttacattatctttttattttctctctctattgcttcggtttttgtgtcactacctcatttcctttgtaaaat 26469490  T
Q  430 tttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||||| ||||||||||||  |  || |||||||||||||||||||||    
T  26469491 tttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 26469542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 395 - 481
Target Start/End: Original strand, 46907292 - 46907378
Alignment:
Q  395 gtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||| | | ||| |||||||||||||||||||||    
T  46907292 gtttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaagttgtcgtataaatggatgttcaaataacacaactc 46907378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 33100837 - 33100991
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||| |||||| ||| ||||| ||||||||||||| ||||||||    |||| |||||||||  ||||| ||||| |||||||||| |||| |||    
T  33100837 acaacttttttgacaactttctctctcatactcacattatctttttactttctctctctattgttttgatttttgtgtcactacctcatttcctttataa 33100936  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||| ||||||||||||  |  ||  ||||||||||||||||||||    
T  33100937 aattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 33100991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 50775198 - 50775044
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttac----tctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||||||||||||||| ||| ||||| |||||||||||||||||||||    ||||| ||||| ||| |||||| |||||| || || ||||||||||||    
T  50775198 acaatttttgtgacaactttctctctcatactcacattatgtttttactttatctctctattgctttggtttttgtgtcaacacatctttttctttgtaa 50775099  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||| |||||||| ||||| ||||||    ||| |  ||||||||||||||||||    
T  50775098 aattatggttgtcacaaaatttgtcaatcaaatggtcgttcaaataacacaactc 50775044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 331 - 450
Target Start/End: Original strand, 23645440 - 23645563
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||| |||||| ||| ||||| ||||||||||||| ||||||||    |||| ||||||||| |||||| || || |||||||||| ||||||||    
T  23645440 acaacttttttgacaactttatctctcatactcacattatctttttactttctctctctattgttttggtttttgtgccactacctcatttcctttgtaa 23645539  T
Q  427 aattttggttgtctcaaaagttgt 450  Q
    ||||||||||||| ||||||||||    
T  23645540 aattttggttgtcacaaaagttgt 23645563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 336 - 439
Target Start/End: Complemental strand, 27533521 - 27533414
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattt 431  Q
    |||||||| || ||| ||| | ||||||| ||||||||||||||    |||| |||||||||  ||||||||||||||||||||||||||||||||||||    
T  27533521 ttttgtgataactttctctatcatactcatattatgtttttactttctctctttattgttttgatttttatgtcaatacctcattttctttgtaaaattt 27533422  T
Q  432 tggttgtc 439  Q
    ||||||||    
T  27533421 tggttgtc 27533414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 396 - 481
Target Start/End: Complemental strand, 48103336 - 48103250
Alignment:
Q  396 tttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatg-ttcaaataacacaactc 481  Q
    ||||| || |||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||| ||||||||    
T  48103336 tttttttgccaataccttattttctttgtaaaattttggttgtctcaaaagttgtcatataaatagatgtttcaaatatcacaactc 48103250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 8350238 - 8350087
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttac--tctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||| ||||||||||| ||| ||||| |||||||||| || |||||||  ||||| ||||| ||| |||||| ||||| ||||| |||| |||||| |||    
T  8350238 acaacttttgtgacaactttctctctcatactcacatgatctttttactttctctctattgctttggtttttgtgtcactaccttatttcctttgt-aaa 8350140  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||| | ||||||||||  |  || |||||||||||||||||||||    
T  8350139 ttttggttgtcacgaaagttgtcacatatatggatgttcaaataacacaactc 8350087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 30735335 - 30735181
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||| ||||||||||||| ||||||||    |||| |||||||||||||||||||  | |||||||||| |||| |||    
T  30735335 acaacttttgtgacaactttttctctcatactcacattatttttttactttctctctctattgttttagtttttatgctactacctcatttactttataa 30735236  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||| ||||| ||||| || |||  |  || ||| |||||||||||||||||    
T  30735235 aattttgattgtcacaaaaattatcacatacatggatattcaaataacacaactc 30735181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 336 - 480
Target Start/End: Original strand, 30570562 - 30570706
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttg 433  Q
    ||||||||||||||| ||||  ||||||||||||||||||||||  |||| |||||||||  ||||| ||  |||| |||  ||||||||||||||||||    
T  30570562 ttttgtgacaattttatctc--atactcacattatgtttttactttctctctattgttttgatttttgtgctaatatctcgatttctttgtaaaattttg 30570659  T
Q  434 gttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaact 480  Q
     |||| |||||| || |||| | |||  |||||||||||||||||||    
T  30570660 attgtttcaaaaattatcatataaatgaatgttcaaataacacaact 30570706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 3982017 - 3981914
Alignment:
Q  378 ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    |||||| ||||||||| ||| || |||||||| ||||||||||||||||||||||| ||||| |||| |||||||  |  || |||||||||||||||||    
T  3982017 ctctctctattgttttggttattgtgtcaatatctcattttctttgtaaaattttgattgtcacaaatgttgtcacatttatggatgttcaaataacaca 3981918  T
Q  478 actc 481  Q
    ||||    
T  3981917 actc 3981914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 331 - 433
Target Start/End: Original strand, 6693190 - 6693292
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||| ||||||||||| ||| ||||| |||||||  |||| ||||||||  |||| ||||||||| ||||||||||||||||||||||| ||||||||||    
T  6693190 acaacttttgtgacaactttttctctcatactca--ttatttttttactttctctctattgttttggtttttatgtcaatacctcatttcctttgtaaaa 6693287  T
Q  429 ttttg 433  Q
    |||||    
T  6693288 ttttg 6693292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 343 - 450
Target Start/End: Original strand, 14983814 - 14983925
Alignment:
Q  343 acaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgt 438  Q
    |||| ||| ||||| ||| ||||||||||||||||||    |||| |||||||||||||||| |||||||| ||| |||||||||| ||||| |||||||    
T  14983814 acaactttctctctcatattcacattatgtttttactttctctctctattgttttagtttttgtgtcaatatctctttttctttgtgaaattatggttgt 14983913  T
Q  439 ctcaaaagttgt 450  Q
    | ||||||||||    
T  14983914 cccaaaagttgt 14983925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 300 - 477
Target Start/End: Original strand, 35369699 - 35369879
Alignment:
Q  300 agagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttag 395  Q
    ||||||||||||||| ||||||||       |||| ||||||||||| ||| | ||| ||||||||||| | ||||||||    |||| ||||| |||      
T  35369699 agagaaatgatatttgaacaatcatttttt-acaacttttgtgacaactttctatctcatactcacattgtctttttactttctctctctattgctttga 35369797  T
Q  396 tttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    ||||| ||||| |||||||||| |||| |||||||||||||||| ||||||||||||  |  || |||||||||||||||||    
T  35369798 tttttgtgtcactacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacaca 35369879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 337 - 452
Target Start/End: Original strand, 43775241 - 43775360
Alignment:
Q  337 tttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaatttt 432  Q
    |||||||||| ||| | ||| |||||| |||||| ||||||||    |||| |||||||||||||||| | |||||| ||||||||||||||||||||||    
T  43775241 tttgtgacaactttctttctcatactcgcattatctttttactttctctctctattgttttagtttttgtatcaatatctcattttctttgtaaaatttt 43775340  T
Q  433 ggttgtctcaaaagttgtca 452  Q
    | |||||  |||||||||||    
T  43775341 gattgtcataaaagttgtca 43775360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 44519193 - 44519039
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||| |||||| ||| ||||||||||| ||||||| ||||||||    |||| ||||| |||  ||||| ||  |||||||||||| ||||||||    
T  44519193 acaacttttatgacaactttctctcttatacttacattatctttttactttctctctctattgctttgatttttgtgctaatacctcatttcctttgtaa 44519094  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||||| || ||||||||||||  |  ||  ||||||||||||||||||||    
T  44519093 aattttggttatcacaaaagttgtcacatatatgaatgttcaaataacacaactc 44519039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 397 - 481
Target Start/End: Original strand, 26207940 - 26208024
Alignment:
Q  397 ttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||||||||| |||||||||||| ||||||||| || || |||||||| | || | |||||||||||||||||||||||||    
T  26207940 ttttatgtcaatacatcattttctttgcaaaattttgattatcacaaaagttataatctaaatagatgttcaaataacacaactc 26208024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 336 - 481
Target Start/End: Complemental strand, 37275070 - 37274921
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttactctctat----attgttttagtttttatgtcaatacctcattttctttgtaaaattt 431  Q
    |||||||| || ||| ||| | ||||||||||||| |||||||| ||| |    |||| ||| |||||| ||||| |||||||||| ||||| |||||||    
T  37275070 ttttgtgataactttctctttcatactcacattatctttttactttctttctctattgctttggtttttgtgtcactacctcatttcctttgcaaaattt 37274971  T
Q  432 tggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    || ||||| ||||||||||||  || |  |||||||||||||||||||||    
T  37274970 tgattgtcacaaaagttgtcacatgtaaggatgttcaaataacacaactc 37274921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 336 - 481
Target Start/End: Original strand, 37619578 - 37619727
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattt 431  Q
    ||||||||||| ||| ||||| ||||||||||||| ||||||    |||||| |||||  ||  ||||| || ||||||||||||| |||||||||||||    
T  37619578 ttttgtgacaactttctctctcatactcacattatctttttaatttctctctctattgcgttgatttttgtgccaatacctcatttcctttgtaaaattt 37619677  T
Q  432 tggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||   |||||||||||  |  || ||||||||||||||| |||||    
T  37619678 tggttgtaataaaagttgtcacatatatggatgttcaaataacataactc 37619727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 295 - 480
Target Start/End: Original strand, 9987945 - 9988134
Alignment:
Q  295 taaatagagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgt 390  Q
    |||| ||||||||||||||| ||||| ||       |||| ||||||||||| ||| ||| | ||||||||||||| ||||||||    |||| |||||     
T  9987945 taaaaagagaaatgatatttgaacaaccaatttttgacaacttttgtgacaactttctctttcatactcacattatatttttactttctctctctattgc 9988044  T
Q  391 tttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaact 480  Q
    |||  ||||| || ||||  |||||||| |||||||||||||||||||  |||| ||||| || | ||  ||||||||||||||||||||    
T  9988045 tttgatttttgtgccaatcactcattttatttgtaaaattttggttgttgcaaaggttgtaatataaaatgatgttcaaataacacaact 9988134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 300 - 481
Target Start/End: Complemental strand, 44914644 - 44914459
Alignment:
Q  300 agagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttag 395  Q
    ||||||||||||||||||||| ||       |||||||| ||||||| ||| |  || | ||||||||||| ||||||    |||||| ||||| |||||    
T  44914644 agagaaatgatattttaacaaacatttttt-acaattttagtgacaactttctgcctcagactcacattatctttttattttctctctctattgctttag 44914546  T
Q  396 tttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaag-ttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||| ||||| |||||||||| ||||||||||||||| ||||| |||||  ||||||  |  || |||||||||||||||||||||    
T  44914545 tttttgtgtcactacctcatttcctttgtaaaattttgattgtcgcaaaaaattgtcacatatatggatgttcaaataacacaactc 44914459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 336 - 439
Target Start/End: Original strand, 29359673 - 29359778
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttg 433  Q
    |||||| |||| ||| ||||| ||||||||||||| ||||||||  |||| ||||| ||| |||||| || || ||| ||||||||||||||||||||||    
T  29359673 ttttgtaacaactttctctctcatactcacattatctttttactttctctctattgctttggtttttgtgccattacatcattttctttgtaaaattttg 29359772  T
Q  434 gttgtc 439  Q
    ||||||    
T  29359773 gttgtc 29359778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 331 - 486
Target Start/End: Original strand, 37685360 - 37685517
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttac--tctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||| ||||||||||| ||| ||||| ||||||||||||| |||||||  ||||| ||||| |||  ||||| ||||| ||||||||||  |||||||||    
T  37685360 acaacttttgtgacaactttctctctcatactcacattatctttttactttctctctattgctttgatttttgtgtcactacctcatttcttttgtaaaa 37685459  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactcgttta 486  Q
    ||||  ||||| ||||| || |||  || ||  |||||||||||||| ||||| ||||    
T  37685460 ttttaattgtcacaaaaattatcacatgtatgaatgttcaaataacataactcattta 37685517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 331 - 486
Target Start/End: Complemental strand, 37700158 - 37700001
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttac--tctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||| ||||||||||| ||| ||||| ||||||||||||| |||||||  ||||| ||||| |||  ||||| ||||| ||||||||||  |||||||||    
T  37700158 acaacttttgtgacaactttctctctcatactcacattatctttttactttctctctattgctttgatttttgtgtcactacctcatttcttttgtaaaa 37700059  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactcgttta 486  Q
    ||||  ||||| ||||| || |||  || ||  |||||||||||||| ||||| ||||    
T  37700058 ttttaattgtcacaaaaattatcacatgtatgaatgttcaaataacataactcattta 37700001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 331 - 486
Target Start/End: Original strand, 50148976 - 50149134
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttactctctat----attgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||||||| ||| | ||| |||| |||| |||||||| ||| |    |||| ||| |||||| |||||||   |||||||||||||||    
T  50148976 acaacttttgtgacaattttttctttcatattcac-ttatatttttactttctttctctattgctttggtttttgtgtcaatcaatcattttctttgtaa 50149074  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactcgttta 486  Q
    ||||||| ||||  ||||||||||||| | ||  ||||||||||||||||||||| ||||    
T  50149075 aattttgattgttgcaaaagttgtcatataaaatgatgttcaaataacacaactctttta 50149134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 355 - 481
Target Start/End: Complemental strand, 2269590 - 2269460
Alignment:
Q  355 cttatactcacattatgtttttactctctat----attgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgt 450  Q
    ||||||||||||||||||||||||| |||      |||| ||| |||||| ||||||||||| |||||||   ||||||||||||||| |||||||||||    
T  2269590 cttatactcacattatgtttttactttctcacttgattgctttggtttttgtgtcaataccttattttctaaataaaattttggttgtatcaaaagttgt 2269491  T
Q  451 catgtgaatagatgttcaaataacacaactc 481  Q
    ||| | | |  || |||||||||||||||||    
T  2269490 catataattgaatattcaaataacacaactc 2269460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 331 - 452
Target Start/End: Complemental strand, 51436813 - 51436687
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttac----tctctatattgttttagtttttatgtcaatacct-cattttctttgta 425  Q
    |||||||||||||||| ||| ||||| ||||||||||| |||||||||    ||||| ||||||||| ||||| |||||||||||| | |||||||||||    
T  51436813 acaatttttgtgacaactttatctctcatactcacattttgtttttactttatctctttattgttttggttttcatgtcaatacctactttttctttgta 51436714  T
Q  426 aaattttggttgtctcaaaagttgtca 452  Q
    ||  | ||||||||  | |||||||||    
T  51436713 aatctatggttgtcatataagttgtca 51436687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 342 - 477
Target Start/End: Original strand, 31433531 - 31433669
Alignment:
Q  342 gacaattttgtctcttatactcacattatgtttttact---ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgt 438  Q
    ||||||||| ||||| |||||||||||||||||||| |   |||| |||| ||||||||||  |||||||||||   || |||||||||  | |||||||    
T  31433531 gacaattttttctctcatactcacattatgtttttatttatctctctattattttagttttcgtgtcaatacctacattactttgtaaatctatggttgt 31433630  T
Q  439 ctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    |||| ||||| ||||   ||||| |||||||||||||||    
T  31433631 ctcataagttatcatacaaatagttgttcaaataacaca 31433669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 336 - 453
Target Start/End: Complemental strand, 47398488 - 47398368
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttac----tctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattt 431  Q
    |||| |||||||||| ||||| |||||||||||||||||| ||    ||||| |||||| || ||| || |||||||||||| || ||||||| |||||     
T  47398488 ttttttgacaattttctctctcatactcacattatgttttcactttatctctttattgtcttggttgttgtgtcaatacctctttatctttgt-aaatta 47398390  T
Q  432 tggttgtctcaaaagttgtcat 453  Q
    ||||||||| ||||||||||||    
T  47398389 tggttgtctaaaaagttgtcat 47398368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 385 - 481
Target Start/End: Complemental strand, 51571330 - 51571234
Alignment:
Q  385 tattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||| ||| |||||| |||||||||||| |||||||||||||||| |||||||| ||||| ||||||    ||| | |||||||||||||||||||    
T  51571330 tattgctttggtttttgtgtcaatacctctttttctttgtaaaattatggttgtcccaaaaattgtcaatcaaatggttgttcaaataacacaactc 51571234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 331 - 452
Target Start/End: Complemental strand, 52576344 - 52576219
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||| ||||||| ||| ||| ||||||| ||||||| ||||||||    |||| ||||| ||| |||||| || |  |||||||||| ||||||||    
T  52576344 acaactttagtgacaactttctcttttatactgacattatttttttactttctctctctattgctttggtttttgtgccggtacctcatttcctttgtaa 52576245  T
Q  427 aattttggttgtctcaaaagttgtca 452  Q
    ||||||||||||| ||||||||||||    
T  52576244 aattttggttgtcacaaaagttgtca 52576219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 333 - 481
Target Start/End: Original strand, 25672373 - 25672525
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    ||||||||| |||| ||| ||| | ||||| | ||||||||||||    |||| | ||||  |||||||||| ||||||||| | |||||||||||||||    
T  25672373 aatttttgtaacaactttatctttcatacttatattatgtttttattttctctttctattactttagtttttgtgtcaatactttattttctttgtaaaa 25672472  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||| || | ||||||||| |||| | ||||| |||||| |||| |||||||    
T  25672473 ttttgattatatcaaaagttatcatataaatagttgttcagataatacaactc 25672525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 402 - 481
Target Start/End: Complemental strand, 30467500 - 30467421
Alignment:
Q  402 tgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||  ||| |||||||||||||| ||| |||||| ||||||||||||| | | |||||||||||||||||||||||    
T  30467500 tgtcaatctctcgttttctttgtaaaactttagttgtcacaaaagttgtcatataattagatgttcaaataacacaactc 30467421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 45121471 - 45121369
Alignment:
Q  378 ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    |||||| ||||| ||| |||||| || || ||| |||||| ||||||||||||||||||||| ||||||||||||  |  || |||||||||||||||||    
T  45121471 ctctctctattgctttggtttttgtgccactac-tcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacaca 45121373  T
Q  478 actc 481  Q
    ||||    
T  45121372 actc 45121369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 50726239 - 50726136
Alignment:
Q  378 ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    |||||| |||||||||  ||||| || || |||||||||||||||| ||||||||||||||| ||||| || |||  |  || |||||||||||||||||    
T  50726239 ctctctctattgttttgatttttgtgccactacctcattttctttgcaaaattttggttgtcacaaaaattatcacatatatggatgttcaaataacaca 50726140  T
Q  478 actc 481  Q
    ||||    
T  50726139 actc 50726136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 333 - 428
Target Start/End: Original strand, 8846005 - 8846104
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||||||||||||||||| ||||| |||||||||| |||||||||||    || | ||||| ||| |||||| ||||||||| || ||||||||||||||    
T  8846005 aatttttgtgacaattttctctctcatactcacatgatgtttttactttttctttctattgctttggtttttgtgtcaatacatctttttctttgtaaaa 8846104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 358 - 481
Target Start/End: Original strand, 48261196 - 48261323
Alignment:
Q  358 atactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcat 453  Q
    ||||||||||||||||||||||    |||| ||||| ||| |||||| || ||||||||| ||| |||||||||| | || |||||||||||||||||      
T  48261196 atactcacattatgtttttactttctctctctattgctttggtttttgtgccaatacctcttttcctttgtaaaaatatgattgtctcaaaagttgtcta 48261295  T
Q  454 gtgaatagatgttcaaataacacaactc 481  Q
       ||||| | |||||||||||||||||    
T  48261296 tcaaataggtattcaaataacacaactc 48261323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 333 - 475
Target Start/End: Original strand, 6809613 - 6809757
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttactctctat--attgttttagtttttatgtcaatacctcattttctttgtaaaatt 430  Q
    ||||||||||| || ||| ||| | |||||||||||||  ||||||| ||| |  ||||||||  ||||| ||  |||   ||||||||| | |||||||    
T  6809613 aatttttgtgataactttatctgtcatactcacattattcttttactttctctccattgttttgatttttgtgctaatgtatcattttctatataaaatt 6809712  T
Q  431 ttggttgtctcaaaagttgtcatgtgaatagatgttcaaataaca 475  Q
    ||||||||| ||||||||||||| | ||| |||||||||||||||    
T  6809713 ttggttgtcccaaaagttgtcatataaatggatgttcaaataaca 6809757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 331 - 439
Target Start/End: Complemental strand, 740997 - 740883
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact------ctctatattgttttagtttttatgtcaatacctcattttctttgt 424  Q
    |||| |||||||||| |||| ||||| ||||||||||||| ||||||||      |||| |||| |||| |||||| ||| ||||| | |||||||||||    
T  740997 acaacttttgtgacatttttctctctcatactcacattatatttttactttctctctctctattattttggtttttgtgttaatacataattttctttgt 740898  T
Q  425 aaaattttggttgtc 439  Q
    |||||| ||||||||    
T  740897 aaaattatggttgtc 740883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 333 - 481
Target Start/End: Complemental strand, 10627849 - 10627698
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    ||||||| |||||||||| | | | ||||||||||||| |||| |||    |||| |||||||||  ||||| | |||||||| |||||||||| |||||    
T  10627849 aatttttatgacaatttttttt-tcatactcacattatattttcactttatctctctattgttttgatttttgtatcaataccacattttctttataaaa 10627751  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||| ||||||||||| ||||||  |  ||| ||||| |||||||| |||||    
T  10627750 ttttgtttgtctcaaaaattgtcacatagatatatgttgaaataacagaactc 10627698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 333 - 477
Target Start/End: Complemental strand, 40861300 - 40861154
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttac--tctctatattgttttagtttttatgtcaatacctcattttctttgtaaaatt 430  Q
    ||||||||||| |||||| ||||| ||| ||||||||| |||||||  ||||| | ||  ||| |||||| || || || || |||| |||| |||||||    
T  40861300 aatttttgtgataattttatctctcatattcacattatctttttactttctctctgttactttggtttttgtgccactatcttatttcctttataaaatt 40861201  T
Q  431 ttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    || |||||| ||||||||| ||  |  ||||||||||||||||||||    
T  40861200 ttagttgtcacaaaagttgacacatatatagatgttcaaataacaca 40861154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 331 - 439
Target Start/End: Complemental strand, 49020445 - 49020335
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttac--tctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||| ||||||||||||||| ||||| ||||||||||||| ||||| |  ||||| ||||||||| |||||| || |||||  |  ||||||||||||||    
T  49020445 acaacttttgtgacaattttttctctcatactcacattatattttttctttctctctattgttttggtttttgtgccaatatatatttttctttgtaaaa 49020346  T
Q  429 ttttggttgtc 439  Q
     | ||||||||    
T  49020345 atatggttgtc 49020335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 49647141 - 49647039
Alignment:
Q  378 ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    |||||| ||||||||| |||||| |||||||| ||| |||| ||  ||||||||| ||||| |||||||||||||| | |||  |||||||||||||| |    
T  49647141 ctctctctattgttttggtttttgtgtcaataactcgtttt-ttcataaaattttagttgtttcaaaagttgtcatataaatgaatgttcaaataacata 49647043  T
Q  478 actc 481  Q
    ||||    
T  49647042 actc 49647039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 331 - 438
Target Start/End: Complemental strand, 15083092 - 15082981
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||||||| ||||| ||||| || |||| ||||||    |||||| ||||| ||| |||||| ||||||||| |||||| ||||||||    
T  15083092 acaacttttgtgacaattttctctctcatacttactttatctttttactttctctctctattgctttggtttttgtgtcaatacttcatttcctttgtaa 15082993  T
Q  427 aattttggttgt 438  Q
    || |||| ||||    
T  15082992 aagtttgattgt 15082981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 379 - 481
Target Start/End: Original strand, 45640383 - 45640484
Alignment:
Q  379 tctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaa 478  Q
    ||||| ||||| |||  ||||| || ||||| ||||||| |||||||||||||||||||   ||||||||||||  |  |||||||||||||||||||||    
T  45640383 tctctctattgctttgatttttgtgccaatatctcattt-ctttgtaaaattttggttgcaacaaaagttgtcacatatatagatgttcaaataacacaa 45640481  T
Q  479 ctc 481  Q
    |||    
T  45640482 ctc 45640484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 333 - 451
Target Start/End: Original strand, 50824773 - 50824894
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttac----tctctatattgttttagtttttatgtcaatacct-cattttctttgtaaa 427  Q
    |||||||||||||||||| ||||| ||||||| ||||| |||||||    ||||| ||||| ||| ||||| |||||||||||| | |||||||||| ||    
T  50824773 aatttttgtgacaattttctctctcatactcatattat-tttttactttatctctctattgctttggttttcatgtcaatacctactttttctttgt-aa 50824870  T
Q  428 attttggttgtctcaaaagttgtc 451  Q
    ||| ||||||| ||| ||||||||    
T  50824871 attatggttgtatcataagttgtc 50824894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 334 - 486
Target Start/End: Complemental strand, 51718665 - 51718513
Alignment:
Q  334 atttttgtgacaattttgtctcttatactcacattatgtttttac----tctctatattgttttagtttttatgtcaatacctcattttctttgtaaaat 429  Q
    |||||| | |||| ||| ||||| ||||||||||||| |||||||    ||||| |||| ||||  ||||| ||||| ||| |||||| ||||||||| |    
T  51718665 atttttttcacaactttctctctcatactcacattatctttttaccttctctctctattattttgatttttgtgtcactacttcatttcctttgtaaagt 51718566  T
Q  430 tttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactcgttta 486  Q
    ||| ||| || ||||||||||||     || ||||||||||||||||||||| ||||    
T  51718565 tttagttatcacaaaagttgtca----catggatgttcaaataacacaactctttta 51718513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 8828112 - 8828012
Alignment:
Q  378 ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    |||||| ||||| ||| |||||| || |||||||||||||  ||| |||||||||||||||| ||||| ||||||  ||   | ||||||||||||||||    
T  8828112 ctctctctattgctttggtttttgtgccaatacctcatttcttttataaaattttggttgtcgcaaaaattgtcacatg---atatgttcaaataacaca 8828016  T
Q  478 actc 481  Q
    ||||    
T  8828015 actc 8828012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 402 - 475
Target Start/End: Complemental strand, 26021043 - 26020970
Alignment:
Q  402 tgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataaca 475  Q
    |||||||| ||| |||| |||||||||||||| |||||||||||| |||||| | |||  ||||||||||||||    
T  26021043 tgtcaatatctctttttttttgtaaaattttgattgtctcaaaagatgtcatataaatgaatgttcaaataaca 26020970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 420 - 481
Target Start/End: Complemental strand, 40328718 - 40328657
Alignment:
Q  420 tttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||||||| | ||||||||| |||| | ||||||||||||||||||| |||||    
T  40328718 tttgtaaaattttggttatatcaaaagttatcatctaaatagatgttcaaataacataactc 40328657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 452
Target Start/End: Complemental strand, 21433442 - 21433317
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||||||||||||||||||||||||    |||||| ||||| ||| ||||  ||||| ||||||  ||||||||  ||    
T  21433442 acaacttttgtgacaactttctctcttatactcacattatgtttttattttctctctctattgctttggtttccatgtcgatacctacttttctttacaa 21433343  T
Q  427 aattttggttgtctcaaaagttgtca 452  Q
    | || ||||||||   ||||||||||    
T  21433342 atttatggttgtcctgaaagttgtca 21433317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 378 - 478
Target Start/End: Original strand, 45333791 - 45333891
Alignment:
Q  378 ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    |||||| ||||| |||  ||||| ||||| |||||||||| ||||||||||||||  ||||| ||||| || |||  |  ||||||||||||||||||||    
T  45333791 ctctctttattgctttgatttttgtgtcactacctcatttcctttgtaaaattttaattgtcacaaaaattatcacatatatagatgttcaaataacaca 45333890  T
Q  478 a 478  Q
    |    
T  45333891 a 45333891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 337 - 477
Target Start/End: Original strand, 11597672 - 11597816
Alignment:
Q  337 tttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaatttt 432  Q
    |||||||||| ||| |||   ||||||||||||||||||||||    |||| ||||||||| |||||  ||  |||| ||  |||||||||||||  | |    
T  11597672 tttgtgacaactttctctgccatactcacattatgtttttactttctctctctattgttttggttttcgtgctaatatctacttttctttgtaaatctat 11597771  T
Q  433 ggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    ||||||| || ||||||||| |  ||| |||||||||||||||||    
T  11597772 ggttgtcccataagttgtcaagcaaatggatgttcaaataacaca 11597816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 331 - 438
Target Start/End: Original strand, 3159405 - 3159516
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||| |  |||| ||||||| ||||||||    |||| ||||| ||| |||||| || || |||||||||| ||||||||    
T  3159405 acaacttttgtgacaactttttctttcgtacttacattatctttttacttcctctctctattgcttttgtttttgtgccactacctcatttcctttgtaa 3159504  T
Q  427 aattttggttgt 438  Q
    ||||||||||||    
T  3159505 aattttggttgt 3159516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 379
Target Start/End: Original strand, 30535990 - 30536069
Alignment:
Q  300 agagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    |||||||||||||||  |||||||       |||||||||||||||| ||| ||||| ||||||||||||| ||||||||    
T  30535990 agagaaatgatatttgtacaatcattttttaacaatttttgtgacaactttctctctcatactcacattatatttttact 30536069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 300 - 439
Target Start/End: Original strand, 12657221 - 12657364
Alignment:
Q  300 agagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttactctctat----attgttttag 395  Q
    ||||||||||||||| ||||||||       |||||||||| || || ||| ||||| ||||||||||||| |||||||| ||| |    |||| ||| |    
T  12657221 agagaaatgatatttgaacaatcatttttt-acaatttttgagataactttctctctcatactcacattatctttttactttctctttctattgctttgg 12657319  T
Q  396 tttttatgtcaa-tacctcattttctttgtaaaattttggttgtc 439  Q
    ||||| |||| | |||||||||| |||| ||||||||||||||||    
T  12657320 tttttgtgtccactacctcatttcctttataaaattttggttgtc 12657364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 300 - 427
Target Start/End: Original strand, 37516523 - 37516652
Alignment:
Q  300 agagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttac--tctctatattgttttagtt 397  Q
    |||||||||||||||| |||||||       ||||||| | |||||||||| ||||| ||||||||||||| || ||||  ||||| ||||| ||| |||    
T  37516523 agagaaatgatattttgacaatcattttgtaacaatttatatgacaattttatctctcatactcacattattttgttactttctctctattgctttggtt 37516622  T
Q  398 tttatgtcaatacctcattttctttgtaaa 427  Q
    || |||||| || ||  ||| |||||||||    
T  37516623 ttcatgtcactatctactttcctttgtaaa 37516652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 395 - 435
Target Start/End: Complemental strand, 24981541 - 24981501
Alignment:
Q  395 gtttttatgtcaatacctcattttctttgtaaaattttggt 435  Q
    |||||| ||||||||||||||||||||| ||||||||||||    
T  24981541 gtttttgtgtcaatacctcattttctttataaaattttggt 24981501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 385 - 425
Target Start/End: Complemental strand, 25509163 - 25509123
Alignment:
Q  385 tattgttttagtttttatgtcaatacctcattttctttgta 425  Q
    ||||||||| |||||| ||||||||||||||||||||||||    
T  25509163 tattgttttggtttttgtgtcaatacctcattttctttgta 25509123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 365 - 473
Target Start/End: Original strand, 32915330 - 32915438
Alignment:
Q  365 cattatgtttttactctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatg 464  Q
    |||||||||||| || ||| |||||||||  |||||||||| | ||| |  ||| ||  ||||||||||||||| ||||||||| | || | ||| ||||    
T  32915330 cattatgtttttcctttctttattgttttgatttttatgtcgaaaccccgcttttttgataaaattttggttgtttcaaaagttattatataaatggatg 32915429  T
Q  465 ttcaaataa 473  Q
    |||||||||    
T  32915430 ttcaaataa 32915438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 337 - 452
Target Start/End: Original strand, 29154816 - 29154932
Alignment:
Q  337 tttgtgacaattttgtctcttatactcacattatgtttttact--ctctatattgttttagtttttatgtcaatacct-cattttctttgtaaaattttg 433  Q
    |||||||||| ||| ||||| ||||||||||||| ||||||||  |||||||||||||| |||||  ||  ||||||| | |||||||||| ||||| |     
T  29154816 tttgtgacaactttctctctcatactcacattat-tttttacttactctatattgttttggttttcgtgcaaatacctacgttttctttgt-aaattatc 29154913  T
Q  434 gttgtctcaaaagttgtca 452  Q
    |||||| || |||||||||    
T  29154914 gttgtcccataagttgtca 29154932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 336 - 440
Target Start/End: Original strand, 30745021 - 30745129
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattt 431  Q
    ||||||||||| ||| ||| | ||||||| |||||  |||||||    |||| ||||||||| |||||| ||||||||| | ||||||||||||| | |     
T  30745021 ttttgtgacaactttctctatcatactcatattataattttactttatctctctattgttttggtttttgtgtcaatacataattttctttgtaagagta 30745120  T
Q  432 tggttgtct 440  Q
    |||||||||    
T  30745121 tggttgtct 30745129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 336 - 440
Target Start/End: Original strand, 30766472 - 30766580
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattt 431  Q
    ||||||||||| ||| ||| | ||||||| |||||  |||||||    |||| ||||||||| |||||| ||||||||| | ||||||||||||| | |     
T  30766472 ttttgtgacaactttctctatcatactcatattataattttactttatctctctattgttttggtttttgtgtcaatacataattttctttgtaagagta 30766571  T
Q  432 tggttgtct 440  Q
    |||||||||    
T  30766572 tggttgtct 30766580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 336 - 409
Target Start/End: Original strand, 30772635 - 30772710
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgttttt-actctct-atattgttttagtttttatgtcaata 409  Q
    ||||||||||||||| ||| ||||||||||||||| ||||| ||  ||| || ||||||| |||||||||||||||    
T  30772635 ttttgtgacaattttttcttttatactcacattatattttttacgttcttatgttgttttggtttttatgtcaata 30772710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 333 - 379
Target Start/End: Complemental strand, 40328780 - 40328734
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    ||||||||||| |||||| ||||| |||||||||||||| |||||||    
T  40328780 aatttttgtgataattttctctctcatactcacattatgattttact 40328734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 337 - 379
Target Start/End: Complemental strand, 50154013 - 50153971
Alignment:
Q  337 tttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    |||||||||||||| ||||| ||| ||||||||||||||||||    
T  50154013 tttgtgacaattttttctctcatattcacattatgtttttact 50153971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 391 - 433
Target Start/End: Complemental strand, 51137629 - 51137587
Alignment:
Q  391 tttagtttttatgtcaatacctcattttctttgtaaaattttg 433  Q
    |||| |||||||||||||| |||||| ||||||||||||||||    
T  51137629 tttaatttttatgtcaatatctcattctctttgtaaaattttg 51137587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 333 - 379
Target Start/End: Original strand, 52437526 - 52437572
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    |||||||||||||| ||| ||||| ||||||||||||| ||||||||    
T  52437526 aatttttgtgacaactttctctctcatactcacattatatttttact 52437572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 377
Target Start/End: Complemental strand, 16836152 - 16836111
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgttttta 377  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||    
T  16836152 ttttgtgacaactttttctctcatactcacattatgttttta 16836111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 378 - 439
Target Start/End: Original strand, 29877378 - 29877439
Alignment:
Q  378 ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtc 439  Q
    |||||| ||||||||| |||||  ||||||||| | ||||||||||||||| | ||||||||    
T  29877378 ctctctctattgttttggttttcgtgtcaatacataattttctttgtaaaaatatggttgtc 29877439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 341 - 442
Target Start/End: Original strand, 36954697 - 36954801
Alignment:
Q  341 tgacaattttgtctcttatactcacattatgtttttac--tctctatattgttttagtttttatgtcaatacctc-attttctttgtaaaattttggttg 437  Q
    |||||| ||| | ||| |||||||||||||||||||||  ||||| | ||| ||||||| || ||||||||||||  |||| |||||||| || || |||    
T  36954697 tgacaactttctttctcatactcacattatgtttttactttctctctcttgctttagttgttgtgtcaatacctcttttttttttgtaaatttatgattg 36954796  T
Q  438 tctca 442  Q
    |||||    
T  36954797 tctca 36954801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 402 - 435
Target Start/End: Original strand, 37186950 - 37186983
Alignment:
Q  402 tgtcaatacctcattttctttgtaaaattttggt 435  Q
    ||||||||||||||||||||| ||||||||||||    
T  37186950 tgtcaatacctcattttctttataaaattttggt 37186983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 1e-34; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 333 - 481
Target Start/End: Complemental strand, 37057097 - 37056945
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    ||||||| |||||||||| ||||| ||  | ||||||  ||||||||    |||| ||||||||| |||||| |||||||||||||||||||||||||||    
T  37057097 aatttttatgacaattttctctctcatgtttacattaattttttactttatctctctattgtttttgtttttgtgtcaatacctcattttctttgtaaaa 37056998  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    | ||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  37056997 tattggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 37056945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 331 - 482
Target Start/End: Original strand, 26014841 - 26014996
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||| ||||||||||||| ||||||||    |||| ||||||||| |||||| || |  |||||||||| ||||||||    
T  26014841 acaacttttgtgacaactttctctctcatactcacattatctttttactttctctctctattgttttggtttttgtgcccttacctcatttcctttgtaa 26014940  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactcg 482  Q
    ||||||||||||| ||||||||||||  || ||||||||| |||||||||||||||    
T  26014941 aattttggttgtcacaaaagttgtcacatgtatagatgtttaaataacacaactcg 26014996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 13348176 - 13348022
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttac----tctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    ||||||||||||| || ||| |||   ||||||||| |||||||||||    ||||| ||||| ||| |||||| | |||||||||||||||||||||||    
T  13348176 acaatttttgtgataactttctcttccatactcacaatatgtttttaccttctctctctattgctttggtttttgtatcaatacctcattttctttgtaa 13348077  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||| ||||||||||||| | ||| ||||||||||||||| |||||    
T  13348076 aattttggttgtcccaaaagttgtcatataaatggatgttcaaataacataactc 13348022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 35377123 - 35376969
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttactctctat----attgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||| | |||||||||||||||||||| ||| |    |||| |||  ||||| || |||||| |||||||||||||||    
T  35377123 acaacttttgtgacaactttctctctcacactcacattatgtttttactttctttctctattgctttgatttttgtgccaatacatcattttctttgtaa 35377024  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||| ||||||||||||| | ||| |||||||||||||||||||||    
T  35377023 aattttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaactc 35376969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 331 - 483
Target Start/End: Original strand, 47472358 - 47472514
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||| ||||||| ||||| ||||||||    |||| | |||||||||||||| || || |||||||||| ||||||||    
T  47472358 acaacttttgtgacaactttctctctcatactcatattatctttttactttctctctctgttgttttagtttttgtgccactacctcatttcctttgtaa 47472457  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactcgt 483  Q
    ||||||||||||| ||||||||||||  |  |||||||||||||||||| |||||||    
T  47472458 aattttggttgtcacaaaagttgtcacatatatagatgttcaaataacataactcgt 47472514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 395 - 481
Target Start/End: Original strand, 21217609 - 21217695
Alignment:
Q  395 gtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  21217609 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 21217695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 395 - 480
Target Start/End: Original strand, 23592555 - 23592640
Alignment:
Q  395 gtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaact 480  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||    
T  23592555 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 23592640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 27541544 - 27541390
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||| ||||||||||| ||||| ||||||||||||| ||||||||    |||| ||||| ||| |||||| || || |||||||||| ||||||||    
T  27541544 acaactttagtgacaattttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaa 27541445  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||| ||||||||||||  |  || |||||||||||||||||||||    
T  27541444 aattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 27541390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 46623936 - 46624090
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttactctctat----attgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||| ||| ||||||||| |||||||| ||| |    |||||||| |||||| ||||| |||||||||||||||||||    
T  46623936 acaacttttgtgacaactttctctctgatattcacattatctttttactttctctttctattgttttggtttttgtgtcactacctcattttctttgtaa 46624035  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||| ||||| |||||||| |||  || || |||||||||||||||||||||    
T  46624036 aattttgattgtcacaaaagttatcacatgtatggatgttcaaataacacaactc 46624090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 331 - 452
Target Start/End: Complemental strand, 45711481 - 45711356
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||||||| ||||| ||||||||||||| ||||||||    |||| ||||||||| ||| || ||||||||| |||||||||||||||    
T  45711481 acaacttttgtgacaattttctctctcatactcacattatctttttactttctctctctattgttttggttattgtgtcaatacttcattttctttgtaa 45711382  T
Q  427 aattttggttgtctcaaaagttgtca 452  Q
    ||||||||||||  ||||||||||||    
T  45711381 aattttggttgttacaaaagttgtca 45711356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 337 - 481
Target Start/End: Original strand, 38926663 - 38926811
Alignment:
Q  337 tttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaatttt 432  Q
    |||||||||| ||| ||||| ||||||||||||| ||||||||    |||| ||||| ||| |||||| ||||| ||||| |||| ||||||||||||||    
T  38926663 tttgtgacaactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtcactaccttatttcctttgtaaaatttt 38926762  T
Q  433 ggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||| | ||||||||||  |  ||||||||||||||||||||||||    
T  38926763 ggttgtcacgaaagttgtcacatatatagatgttcaaataacacaactc 38926811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 331 - 478
Target Start/End: Complemental strand, 42358680 - 42358529
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||||||||||||||| ||| ||||| ||||||||||||| ||||||||    |||| ||||| |||  ||||| |||||||||||||||| ||||| ||    
T  42358680 acaatttttgtgacaactttctctctcatactcacattatctttttactttatctctctattgctttgatttttgtgtcaatacctcatttcctttgcaa 42358581  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaa 478  Q
    ||||||| ||||| ||||||||||||  |  || ||||||||||||||||||    
T  42358580 aattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaa 42358529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 5114107 - 5114261
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    ||||||||| |||||| ||| ||||| | ||||||||||| ||||||||    |||| ||||| |||  ||||| ||||| |||||||||||||||||||    
T  5114107 acaatttttttgacaactttctctctcacactcacattatctttttactttctctctctattgctttgatttttgtgtcactacctcattttctttgtaa 5114206  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||| |||||  |||| ||||||  | |||||||||||||||||||||||||    
T  5114207 aattttgattgtcataaaaattgtcacataaatagatgttcaaataacacaactc 5114261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 36671056 - 36670902
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||||||||||||||| ||| ||||| ||||||||||||| ||||||||    |||| ||||| ||| |||||| || || ||||||||||  |||||||    
T  36671056 acaatttttgtgacaactttttctctcatactcacattatctttttactttttctctctattgctttggtttttgtgccactacctcatttcatttgtaa 36670957  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||| |||||||| |||  |  || |||||||||||||||||||||    
T  36670956 aattttggttgtcacaaaagttatcacatatatggatgttcaaataacacaactc 36670902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 396 - 481
Target Start/End: Original strand, 44383287 - 44383372
Alignment:
Q  396 tttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||    
T  44383287 tttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 44383372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 331 - 452
Target Start/End: Original strand, 35597191 - 35597316
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||||||| ||||||| ||| ||||| ||||||||||||| ||||||||    |||| ||||||||| |||||| ||||| |||||| ||| ||||||||    
T  35597191 acaattttagtgacaactttctctctcatactcacattatttttttactttctctctctattgttttggtttttgtgtcactacctcgtttcctttgtaa 35597290  T
Q  427 aattttggttgtctcaaaagttgtca 452  Q
    ||||||||||||| ||||||||||||    
T  35597291 aattttggttgtcacaaaagttgtca 35597316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 331 - 482
Target Start/End: Complemental strand, 42357122 - 42356971
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttactctctat--attgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||| ||||||||||| ||| ||||  |||||||||| || |||||||||||| |  |||| ||| |||||| ||||| |||||||||| ||||||||||    
T  42357122 acaacttttgtgacaactttctctc--atactcacatgatctttttactctctctctattgctttggtttttgtgtcactacctcatttcctttgtaaaa 42357025  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactcg 482  Q
    ||||||||||| ||||| ||||||  |  || ||||||||||||||||||||||    
T  42357024 ttttggttgtcacaaaaattgtcacatatatggatgttcaaataacacaactcg 42356971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 331 - 477
Target Start/End: Original strand, 5244258 - 5244408
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||| ||||||||||||| ||||||||    |||| ||||| ||| |||||| || || |||||||||| ||||||||    
T  5244258 acaacttttgtgacaactttctctctcatactcacattatttttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaa 5244357  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    ||||||||||||| ||||| ||||||  |  ||| ||||||||||||||||    
T  5244358 aattttggttgtcacaaaaattgtcacatatataaatgttcaaataacaca 5244408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 16969608 - 16969454
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttactctctat----attgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||| |||||| ||| ||||| ||||||||||||| |||||||| ||| |    ||||||||  |||||||| || |||||||||| ||||||||    
T  16969608 acaacttttttgacaactttctctctcatactcacattatctttttactttctctttctattgttttgatttttatgccactacctcatttcctttgtaa 16969509  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||| |||||| ||||||||||||  |  || |||||||||||||||||||||    
T  16969508 aattttagttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 16969454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 343 - 487
Target Start/End: Complemental strand, 25641600 - 25641465
Alignment:
Q  343 acaattttgtctcttatactcacattatgtttttactctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctca 442  Q
    |||| ||||||||| |||||||||||||||||||||| ||| |         |||||| || |||||||| ||||||| ||||||| |||||||||||||    
T  25641600 acaactttgtctctcatactcacattatgtttttactttctct---------gtttttgtgccaataccttattttctatgtaaaactttggttgtctca 25641510  T
Q  443 aaagttgtcatgtgaatagatgttcaaataacacaactcgtttaa 487  Q
    ||||||||||| | ||| ||||||||||||| ||||||| |||||    
T  25641509 aaagttgtcatataaatggatgttcaaataatacaactcttttaa 25641465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 298 - 452
Target Start/End: Complemental strand, 20548064 - 20547907
Alignment:
Q  298 atagagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgtttt 393  Q
    ||||||||||||||||| ||||||||       |||| ||||||||||||||| ||||| |||||||| |||| ||||||||    |||| ||||| |||    
T  20548064 atagagaaatgatatttgaacaatcagttttt-acaacttttgtgacaattttctctctcatactcacgttatctttttactttctctctctattgcttt 20547966  T
Q  394 agtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtca 452  Q
      ||||| || || |||||||||| ||||||||||||||||||||| ||||||||||||    
T  20547965 gatttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtca 20547907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 385 - 480
Target Start/End: Complemental strand, 35201418 - 35201323
Alignment:
Q  385 tattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaact 480  Q
    ||||||||| |||||| |||||||| || |||||||||||| ||||||  ||||||||||||||||||| | ||| ||||||||||||||||||||    
T  35201418 tattgttttggtttttgtgtcaatatcttattttctttgtataattttaattgtctcaaaagttgtcatttaaatggatgttcaaataacacaact 35201323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 331 - 439
Target Start/End: Complemental strand, 44413962 - 44413852
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttac--tctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||| ||||||||||| ||| ||||| ||||||||||||| |||||||  ||||| ||||| ||| |||||| |||||||| ||||||||||||||||||    
T  44413962 acaacttttgtgacaactttctctctcatactcacattatctttttaccttctctctattgctttggtttttgtgtcaatatctcattttctttgtaaaa 44413863  T
Q  429 ttttggttgtc 439  Q
    ||||| |||||    
T  44413862 ttttgattgtc 44413852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 378 - 481
Target Start/End: Original strand, 51982179 - 51982282
Alignment:
Q  378 ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    |||||| ||||| |||||||||| ||||||||||| ||||||||| ||||||||| |||||||||||| |||| || | ||| ||| |||||||||||||    
T  51982179 ctctctctattgctttagtttttgtgtcaataccttattttctttataaaattttagttgtctcaaaaattgttatataaatggattttcaaataacaca 51982278  T
Q  478 actc 481  Q
    ||||    
T  51982279 actc 51982282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 331 - 486
Target Start/End: Complemental strand, 6178467 - 6178308
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||||||| ||||| ||||||||||||||||||||    |||||| ||||| |||  ||||| |||||||||| | ||||||||  ||    
T  6178467 acaacttttgtgacaattttctctctcatactcacattatgtttttactttctctctctattgctttgatttttgtgtcaataccactttttctttacaa 6178368  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactcgttta 486  Q
    | || ||||||| || |||||||||||   ||| | ||||||||||||||||||| ||||    
T  6178367 atttatggttgtatcgaaagttgtcataaaaatggttgttcaaataacacaactctttta 6178308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 331 - 478
Target Start/End: Complemental strand, 7668229 - 7668079
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||| |||||||||| ||||||||||||||||||| ||||||||    |||| ||||| ||| ||||||||| || || || |||| ||| | ||    
T  7668229 acaacttttttgacaattttctctcttatactcacattatctttttactttctctctctattgctttggtttttatgccactatcttatttcctt-gcaa 7668131  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaa 478  Q
    ||||||||||||| ||||||||||||  || || ||||||||||||||||||    
T  7668130 aattttggttgtcacaaaagttgtcacatgtatggatgttcaaataacacaa 7668079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 407 - 480
Target Start/End: Original strand, 23600702 - 23600775
Alignment:
Q  407 atacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaact 480  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||    
T  23600702 atacntcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 23600775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 395 - 481
Target Start/End: Original strand, 42889082 - 42889168
Alignment:
Q  395 gtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||| || ||||| |||||||||||||||||||||||||| | |||||||||||||| | |||||||||| ||||||||||||||    
T  42889082 gtttttgtgccaataactcattttctttgtaaaattttggttatatcaaaagttgtcatctaaatagatgtttaaataacacaactc 42889168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 52326048 - 52326202
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||| || |||||||||| ||||||||    |||| ||||||||| |||||| ||    |||||||||| ||||||||    
T  52326048 acaacttttgtgacaactttctctctcatgctcacattatctttttactttctctctctattgttttggtttttgtgcacttacctcatttcctttgtaa 52326147  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||| |||||  |||||||||||| |  || |||||||||||||||||||||    
T  52326148 aattttgattgtcataaaagttgtcatatatatggatgttcaaataacacaactc 52326202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 385 - 481
Target Start/End: Complemental strand, 32924265 - 32924169
Alignment:
Q  385 tattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||| ||| |||||| ||||| |||||||||| ||||||||||||||||||||| ||||||||||||  |  || |||||||||||||||||||||    
T  32924265 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 32924169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 333 - 481
Target Start/End: Original strand, 33939267 - 33939421
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact------ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||||||||||||| ||| ||||| ||| ||||||||| ||||||||      |||| ||||| ||| |||||| ||||| ||| |||||| ||||| |     
T  33939267 aatttttgtgacaactttctctctcatattcacattatctttttactttctctctctctattgctttggtttttgtgtcactacttcatttcctttgaat 33939366  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||| ||||||||||||  |  || |||||||||||||||||||||    
T  33939367 aattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 33939421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 331 - 439
Target Start/End: Original strand, 41505520 - 41505632
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||| ||||||||||||| ||||||||    |||| ||||| ||| |||||| ||||| |||||||||| ||||||||    
T  41505520 acaacttttgtgacaactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtcactacctcatttcctttgtaa 41505619  T
Q  427 aattttggttgtc 439  Q
    |||||||||||||    
T  41505620 aattttggttgtc 41505632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 358 - 482
Target Start/End: Complemental strand, 44413410 - 44413282
Alignment:
Q  358 atactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcat 453  Q
    ||||||||||||| ||||||||    |||| ||||| ||  |||||| || ||||||||||||| ||||||||||||||  ||||| ||||||||||||     
T  44413410 atactcacattatctttttactttctctctttattgcttcggtttttgtgccaatacctcatttcctttgtaaaattttaattgtcacaaaagttgtcac 44413311  T
Q  454 gtgaatagatgttcaaataacacaactcg 482  Q
     |  |||||||||||||||||||||||||    
T  44413310 atatatagatgttcaaataacacaactcg 44413282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 296 - 481
Target Start/End: Original strand, 52939648 - 52939834
Alignment:
Q  296 aaatagagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgtt 391  Q
    ||||||||||||||||||| ||||| ||       |||| ||||||||||| ||| ||||  |||||||||| || ||||||||    |||| ||||| |    
T  52939648 aaatagagaaatgatatttgaacaaccatttttt-acaacttttgtgacaactttctctc--atactcacatgatctttttactttctctctctattgct 52939744  T
Q  392 ttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    || |||||| || || |||||||||| ||||||||||||||||||||| | ||||||||||  |  || |||||||||||||||||||||    
T  52939745 ttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacgaaagttgtcacatatatggatgttcaaataacacaactc 52939834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 333 - 480
Target Start/End: Complemental strand, 28539780 - 28539629
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||||||||||||||||| | ||| | ||||| ||||||||||||||    |||| ||||| |||   |||| || ||| || |||||||||||| ||||    
T  28539780 aatttttgtgacaattttctttctcacactcatattatgtttttactttctctctctattgctttgacttttgtgccaaaacatcattttctttgcaaaa 28539681  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaact 480  Q
    |||||||| || |||||||| |||| | ||| ||||||||||||||||||||    
T  28539680 ttttggttatcacaaaagttatcatctaaatggatgttcaaataacacaact 28539629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 331 - 477
Target Start/End: Complemental strand, 11630790 - 11630642
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||| |||||||| || ||| ||| | ||||||  ||||| ||||||||  |||| ||||  ||| |||||||| ||||||| |||||||||||||||||    
T  11630790 acaacttttgtgataactttttctttcatactcttattatatttttactttctctctattactttggtttttatatcaatacttcattttctttgtaaaa 11630691  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    ||||  ||||||||||| ||||||| | |||  ||||||||||||||||    
T  11630690 ttttaattgtctcaaaaattgtcatataaatgaatgttcaaataacaca 11630642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 352 - 481
Target Start/End: Original strand, 19149040 - 19149173
Alignment:
Q  352 tctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagt 447  Q
    ||||| ||||||||||||| ||||||||    |||| ||||||||| |||||| || || || ||||||| ||||||||||||||| ||||| ||||| |    
T  19149040 tctctcatactcacattatctttttactttctctctttattgttttggtttttgtgccactaactcatttcctttgtaaaattttgattgtcacaaaaat 19149139  T
Q  448 tgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||  |  || |||||||||||||||||||||    
T  19149140 tgtcacatatatggatgttcaaataacacaactc 19149173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 333 - 481
Target Start/End: Complemental strand, 31157717 - 31157565
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||||||||||||||||| ||||||||||||||||||| |||||| |    |||  |||||||||  ||||| |  |||||||| |||| ||||||||||    
T  31157717 aatttttgtgacaattttttctcttatactcacattatctttttatttttcctccttattgttttgatttttgtaccaatacctaatttcctttgtaaaa 31157618  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||| | ||| || ||||| |||  |  || |||||||||||||||||||||    
T  31157617 ttttgatagtcacagaagttatcacatatatggatgttcaaataacacaactc 31157565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 333 - 481
Target Start/End: Complemental strand, 37503787 - 37503635
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttactctctat----attgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||||||||||||| ||| ||| | ||||||||||||  |||||||| ||| |    |||| |||  ||||| |||||||| ||||||| ||||| ||||    
T  37503787 aatttttgtgacaactttatctttcatactcacattacttttttactttctttttctattgctttgatttttgtgtcaatatctcatttcctttgcaaaa 37503688  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||| |||||||| |||  |  ||| ||||||||||||||||||||    
T  37503687 ttttggttgtcacaaaagttatcacatatataaatgttcaaataacacaactc 37503635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 341 - 481
Target Start/End: Complemental strand, 55361265 - 55361121
Alignment:
Q  341 tgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggtt 436  Q
    |||||| ||| ||||||||||||||||||| ||||||||    |||| ||||| ||| |||||| ||||||||| ||||||||||||||||    |||||    
T  55361265 tgacaactttctctcttatactcacattatttttttactttctctctctattgctttggtttttgtgtcaatacttcattttctttgtaaatcaatggtt 55361166  T
Q  437 gtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||| || ||||| ||||   ||||| ||||||||||| |||||||    
T  55361165 gtcacataagttttcattcaaatagttgttcaaataaaacaactc 55361121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 333 - 478
Target Start/End: Original strand, 8847141 - 8847289
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    ||||||||| | || ||| ||||| ||||||||||||| ||||||||    || | ||||||||| |||||| || |||||||||||||| |||||||||    
T  8847141 aatttttgtcataactttctctctcatactcacattatttttttactttttctttctattgttttggtttttgtgccaatacctcattttatttgtaaaa 8847240  T
Q  429 ttttggttgtctcaaaagttgt-catgtgaatagatgttcaaataacacaa 478  Q
    ||||| || || |||||||||| ||| |  || ||||||||||||||||||    
T  8847241 ttttgattatcacaaaagttgtacatat--atggatgttcaaataacacaa 8847289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 378 - 480
Target Start/End: Complemental strand, 24256762 - 24256660
Alignment:
Q  378 ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    |||||| |||||||||  ||||| | |||||||||||||| ||||||||||||||  ||||| ||||||||||||  |  |||||| |||||||||||||    
T  24256762 ctctctttattgttttgatttttgtatcaatacctcatttcctttgtaaaattttaattgtcacaaaagttgtcacatatatagattttcaaataacaca 24256663  T
Q  478 act 480  Q
    |||    
T  24256662 act 24256660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 37302575 - 37302729
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||| ||| ||||||||  ||||||||    |||| ||||  ||| |||||| || || |||||||||| ||||| ||    
T  37302575 acaacttttgtgacaactttctctctcatattcacattacctttttactttctctctctattactttggtttttgtgccactacctcatttcctttgcaa 37302674  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||| ||||| ||||||||||||  || || ||||||||||||| |||||||    
T  37302675 aattttgattgtcacaaaagttgtcaaatgtatggatgttcaaataagacaactc 37302729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 52254180 - 52254026
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||| |||||| ||| ||||| |||||| |||| | ||||||||    |||| ||||| ||| |||||| ||||| |||||||||| ||||||||    
T  52254180 acaacttttatgacaactttctctctcatactcgcattgtctttttactttctctctctattgctttggtttttgtgtcactacctcatttcctttgtaa 52254081  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||| |||||| ||||| ||||||  |  || ||||||||||| |||||||||    
T  52254080 aattttagttgtcacaaaaattgtcacatatatggatgttcaaatgacacaactc 52254026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 336 - 481
Target Start/End: Original strand, 288760 - 288909
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattt 431  Q
    ||||||||||| ||| ||||| ||||||||||||| ||||||    |||||| ||||| ||| |||||| ||||| || |||||||  ||||||||||||    
T  288760 ttttgtgacaactttctctctcatactcacattatttttttactttctctctctattgctttggtttttgtgtcactatctcatttcttttgtaaaattt 288859  T
Q  432 tggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    || ||||  ||| ||||||||  |  || ||| |||||||||||||||||    
T  288860 tgattgttacaatagttgtcacatatatggattttcaaataacacaactc 288909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 33791785 - 33791700
Alignment:
Q  358 atactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtc 439  Q
    ||||||||||||||||||||||    |||| |||||||||   |||| ||||||||||||||||||||||| ||||||||||||||    
T  33791785 atactcacattatgtttttactttccctctctattgttttgacttttgtgtcaatacctcattttctttgtgaaattttggttgtc 33791700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 331 - 480
Target Start/End: Complemental strand, 50559253 - 50559101
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||||||| ||||| ||||| ||||||||||||||    |||||| |||||||||  |||||||  ||||||||  |||||||| |||    
T  50559253 acaacttttgtgacaattttctctctcatacttacattatgtttttactttctctctctattgttttgatttttataccaatacct-tttttctttataa 50559155  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaact 480  Q
    | || ||||||||  |||| || |||  | ||||| ||||||||||||||||||    
T  50559154 atttatggttgtcataaaaattatcacataaatagttgttcaaataacacaact 50559101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 378 - 481
Target Start/End: Original strand, 41309197 - 41309300
Alignment:
Q  378 ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    |||||| ||||| |||  ||||| ||||| |||||||||||||||||||||||||| ||||| |||||||| ||   |  || |||||||||||||||||    
T  41309197 ctctctctattgctttgatttttgtgtcactacctcattttctttgtaaaattttgattgtcacaaaagttatcgcatatatggatgttcaaataacaca 41309296  T
Q  478 actc 481  Q
    ||||    
T  41309297 actc 41309300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 386 - 453
Target Start/End: Complemental strand, 49087090 - 49087024
Alignment:
Q  386 attgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcat 453  Q
    |||||||| |||||| |||||||||||||||||||||| |||||||||||||| || |||||||||||    
T  49087090 attgttttggtttttgtgtcaatacctcattttctttgaaaaattttggttgtttc-aaagttgtcat 49087024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 55151758 - 55151605
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttt---tactctctatattgttttagtttttatgtcaatacctcattttctttgtaaa 427  Q
    |||| |||| ||| |||||| ||||| |||||| |||||| ||||   | |||||| || || ||| |||||| ||||||||| |||||| |||||||||    
T  55151758 acaacttttatgataattttatctctcatactctcattatcttttactttctctctctagtgctttggtttttgtgtcaatacttcatttcctttgtaaa 55151659  T
Q  428 attttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||  ||||  ||||||||||||  |  ||| ||||||||||||||||||||    
T  55151658 attttaattgtaacaaaagttgtcacatatataaatgttcaaataacacaactc 55151605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 331 - 429
Target Start/End: Complemental strand, 1796087 - 1795985
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttac----tctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||| ||| |||||| ||||| ||  |||||||||||||||||    ||||| |||||||||||||||| ||| ||||||||||||||||| |||    
T  1796087 acaacttttatgataattttctctctcatgttcacattatgtttttacattctctctttattgttttagtttttgtgttaatacctcattttctttataa 1795988  T
Q  427 aat 429  Q
    |||    
T  1795987 aat 1795985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 7934004 - 7934157
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||||||| |||||| ||||| ||||||||||||| || |||    |||| | ||||| ||| |||||| ||||| || ||||| | ||||||||    
T  7934004 acaacttttgtgataattttctctctcatactcacattatcttcttactttctctttttattgctttggttttt-tgtcactatctcatatcctttgtaa 7934102  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||| |||||| ||||| ||||||  |  || |||||||||||||||||||||    
T  7934103 aattttagttgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 7934157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 408 - 481
Target Start/End: Original strand, 13735840 - 13735913
Alignment:
Q  408 tacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||||| ||||| ||||||||||||||| ||||||||||||  |  || |||||||||||||||||||||    
T  13735840 tacctcatttcctttgcaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 13735913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 44813163 - 44813319
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact------ctctatattgttttagtttttatgtcaatacctcattttctttgt 424  Q
    |||||||||||||||  ||| ||||| ||||||||||||| |||| |||      |||| ||||| ||  |||||| || || ||||| |||| ||||||    
T  44813163 acaatttttgtgacagctttctctctcatactcacattattttttaactttctctctctctattgcttgggtttttgtgccactacctaatttcctttgt 44813262  T
Q  425 aaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||| ||| | ||||||||||||  |  |||||||||||||| |||||||||    
T  44813263 aaaattttgattgccacaaaagttgtcacatatatagatgttcaaatcacacaactc 44813319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 44855982 - 44856136
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| || || ||||||||||||  ||||||||    |||| ||||  |||  ||||| || || |||||||||| ||||||||    
T  44855982 acaacttttgtgacaactttctcactcatactcacattacctttttactttctctctctatttctttgatttttgtgccactacctcatttcctttgtaa 44856081  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||||||||  | |||||||||  |  || |||||||||||||||||||||    
T  44856082 aattttggttgtcatacaagttgtcacatatatggatgttcaaataacacaactc 44856136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 297 - 435
Target Start/End: Original strand, 45000060 - 45000200
Alignment:
Q  297 aatagagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttt 392  Q
    |||||||||||||||||||||||| ||       ||||||||| |||||| ||| ||||| ||  ||||||||| ||||||||    |||| ||||| ||    
T  45000060 aatagagaaatgatattttaacaaccatttttttacaatttttttgacaactttttctctcat--tcacattatctttttactttctctctctattgatt 45000157  T
Q  393 tagtttttatgtcaatacctcattttctttgtaaaattttggt 435  Q
    | |||||| || || |||||||||| |||||||||||||||||    
T  45000158 tggtttttgtgccactacctcatttcctttgtaaaattttggt 45000200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 331 - 436
Target Start/End: Complemental strand, 39629880 - 39629771
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||||||||||  || ||||| ||||||||||||||||||||    |||||| |||||||||  ||||||||||||||  |  |||||||| |||    
T  39629880 acaacttttgtgacaaccttctctctcatactcacattatgtttttactttctctctctattgttttgatttttatgtcaataatttcttttctttataa 39629781  T
Q  427 aattttggtt 436  Q
    ||||||||||    
T  39629780 aattttggtt 39629771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 333 - 452
Target Start/End: Complemental strand, 19960672 - 19960551
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    ||||||||| ||| |||| ||||| ||||| ||||||||||||||||    |||| ||||||||| |||| |  ||||||| ||  ||||||| ||||||    
T  19960672 aatttttgtaacagttttctctctcatacttacattatgtttttactttttctctctattgttttggtttgt--gtcaatatcttcttttcttcgtaaaa 19960575  T
Q  429 ttttggttgtctcaaaagttgtca 452  Q
    || || ||||||||||||||||||    
T  19960574 ttatgtttgtctcaaaagttgtca 19960551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 404 - 479
Target Start/End: Original strand, 44463463 - 44463538
Alignment:
Q  404 tcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaac 479  Q
    |||||| | ||||||||||||||||||||| || ||||||||||| |||| | | | |||||||||||||||||||    
T  44463463 tcaatatcacattttctttgtaaaattttgattatctcaaaagttatcatataatttgatgttcaaataacacaac 44463538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 379 - 477
Target Start/End: Original strand, 42997366 - 42997464
Alignment:
Q  379 tctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    ||||| ||||||||| || ||| ||| |||| || ||||||||| || |||||||||||||| |||||||||||| | |||  ||||| ||||||||||    
T  42997366 tctctttattgttttggtctttttgttaatatcttattttctttatacaattttggttgtcttaaaagttgtcatataaatgaatgtttaaataacaca 42997464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 387 - 483
Target Start/End: Complemental strand, 14226687 - 14226591
Alignment:
Q  387 ttgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaataga-tgttcaaataacacaactcgt 483  Q
    ||||||| |||||| ||||||||  |||||||||||||||||||||| |||||| |||| |||| |  | ||| || |||||||||||||||||||||    
T  14226687 ttgttttggtttttgtgtcaatatttcattttctttgtaaaattttgattgtcttaaaaattgttacat-aattgattgttcaaataacacaactcgt 14226591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 335 - 481
Target Start/End: Complemental strand, 39630655 - 39630505
Alignment:
Q  335 tttttgtgacaattttgtctcttatactcacattatgtttttactctctat----attgttttagtttttatgtcaatacctcattttctttgtaaaatt 430  Q
    ||||||| |||||||| ||||| ||| ||| ||||| |||||||| | | |    ||| |||| |||||| ||  || |||| |||||||||||||||||    
T  39630655 tttttgtcacaattttctctctcatattcatattatatttttactttttttgtctattattttggtttttgtgctaacacctaattttctttgtaaaatt 39630556  T
Q  431 ttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||| |||||| |||| || | || | ||||||||||||||||||| |||||    
T  39630555 ttgattgtcttaaaaattattatataaatagatgttcaaataacaaaactc 39630505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 299 - 452
Target Start/End: Original strand, 10811133 - 10811289
Alignment:
Q  299 tagagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgtttta 394  Q
    |||||||||||||||| ||||| ||       |||| ||||||||||| ||| ||||| ||||||||||| ||||||||    |||||| ||||| |||     
T  10811133 tagagaaatgatatttgaacaaccattttatgacaacttttgtgacaactttctctctcatactcacattgtgtttttaccttctctctctattgctttg 10811232  T
Q  395 gtttttatgtcaatacctcat-tttctttgtaaaattttggttgtctcaaaagttgtca 452  Q
    || ||| |||||||| ||||| ||||||||| | |||| ||||||| ||||||||||||    
T  10811233 gtatttgtgtcaata-ctcatatttctttgt-atatttaggttgtcccaaaagttgtca 10811289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 439
Target Start/End: Complemental strand, 29917065 - 29916957
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttactctctatattgttttagtttttatgtcaatacctcattttctttgtaaaatt 430  Q
    |||| ||||||||||| ||| ||||| ||||||||||||| |||||||| | ||||||| |||  ||||| |||||| || |  ||| |||||||||| |    
T  29917065 acaacttttgtgacaactttctctctcatactcacattatatttttactttttatattgctttgatttttgtgtcaacacatactttcctttgtaaaaat 29916966  T
Q  431 ttggttgtc 439  Q
     ||||||||    
T  29916965 atggttgtc 29916957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 439
Target Start/End: Complemental strand, 29966218 - 29966110
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttactctctatattgttttagtttttatgtcaatacctcattttctttgtaaaatt 430  Q
    |||| ||||||||||| ||| ||||| ||||||||||||| |||||||| | ||||||| |||  ||||| |||||| || |  ||| |||||||||| |    
T  29966218 acaacttttgtgacaactttctctctcatactcacattatatttttactttttatattgctttgatttttgtgtcaacacatactttcctttgtaaaaat 29966119  T
Q  431 ttggttgtc 439  Q
     ||||||||    
T  29966118 atggttgtc 29966110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 339 - 477
Target Start/End: Original strand, 27511762 - 27511903
Alignment:
Q  339 tgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttgg 434  Q
    |||||||| ||| ||||| |||||||| ||||||||| |||    |||| ||||||||| ||||   |||||||| ||  ||||||||||||| || |||    
T  27511762 tgtgacaactttctctctcatactcacgttatgttttcactttcactctctattgttttggtttccgtgtcaatatctacttttctttgtaaatttatgg 27511861  T
Q  435 ttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    ||||| ||||||||||||    ||| | |||||||||||||||    
T  27511862 ttgtc-caaaagttgtcacacaaattgttgttcaaataacaca 27511903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 391 - 452
Target Start/End: Complemental strand, 46965896 - 46965835
Alignment:
Q  391 tttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtca 452  Q
    |||||||||| |||||||||||  ||||||||||||| || ||||||||  |||||||||||    
T  46965896 tttagtttttgtgtcaatacctacttttctttgtaaatttatggttgtcctaaaagttgtca 46965835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 337 - 450
Target Start/End: Original strand, 9311076 - 9311193
Alignment:
Q  337 tttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaatttt 432  Q
    |||||||||| ||| ||||||| ||||| ||||||||||||    |||||  ||||||||| |||||  |||||||||||  |||||||| ||||  | |    
T  9311076 tttgtgacaactttctctcttacactcatattatgtttttactttctctccctattgttttggttttcgtgtcaatacctacttttctttttaaatatat 9311175  T
Q  433 ggttgtctcaaaagttgt 450  Q
    ||||||| || |||||||    
T  9311176 ggttgtcccataagttgt 9311193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 385 - 481
Target Start/End: Complemental strand, 49780724 - 49780628
Alignment:
Q  385 tattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||| ||| |||||| || ||||||||| ||||||||||||| || ||||||||  |||| || |||  | ||||| | |||||||||||||||||    
T  49780724 tattgctttggtttttgtgccaatacctccttttctttgtaaatttatggttgtcataaaaattatcacttaaatagttattcaaataacacaactc 49780628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 337 - 477
Target Start/End: Complemental strand, 12762725 - 12762581
Alignment:
Q  337 tttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaatttt 432  Q
    |||||||||||||| | ||| || |||||| ||| ||||||    |||||| ||||  |||  ||||| |||||||| ||  ||||||||||||| || |    
T  12762725 tttgtgacaattttctttctcattctcacaatatatttttattttctctctttattactttgatttttgtgtcaataactatttttctttgtaaatttat 12762626  T
Q  433 ggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    ||||||| || || ||||||||| |||   |||||||||||||||    
T  12762625 ggttgtcccataaattgtcatgtaaatgattgttcaaataacaca 12762581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 406 - 481
Target Start/End: Original strand, 44445402 - 44445477
Alignment:
Q  406 aatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||| |||||||||||| ||||||||||||||||  ||||||||| |  |  || ||||||||||||||| |||||    
T  44445402 aatatctcattttctttataaaattttggttgtcataaaagttgttacatatatcgatgttcaaataacataactc 44445477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 342 - 477
Target Start/End: Original strand, 50314665 - 50314808
Alignment:
Q  342 gacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctca-----ttttctttgtaaaatttt 432  Q
    ||||||||| ||||| ||||||||||||||||||||    |||||| ||||  |||  ||||| |||||||||||||     |||| ||| ||||| |||    
T  50314665 gacaattttctctctcatactcacattatgtttttactttctctctctattactttgatttttgtgtcaatacctcagttttttttttttttaaaaattt 50314764  T
Q  433 ggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
      || ||| |||||||||||| | ||||||| |||||||||||||    
T  50314765 -attatcttaaaagttgtcatataaatagatattcaaataacaca 50314808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 352 - 439
Target Start/End: Original strand, 1436867 - 1436958
Alignment:
Q  352 tctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtc 439  Q
    ||||||||||||||||||| ||||||    |||||| |||||||||| ||||| || ||| || |  |||||||||||||| | ||||||||    
T  1436867 tctcttatactcacattatatttttactttctctctctattgttttattttttgtgccaacacatacttttctttgtaaaaatatggttgtc 1436958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 336 - 407
Target Start/End: Original strand, 9753253 - 9753328
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaa 407  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    |||| | ||||||||| |||||| ||||||    
T  9753253 ttttgtgacaattttatctctcatactcacattgtgtttttattttctctatctattgttttggtttttgtgtcaa 9753328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 385 - 479
Target Start/End: Complemental strand, 11056922 - 11056823
Alignment:
Q  385 tattgttttagtttttatgtcaatacctcattttctttgtaaa----attt-tggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaac 479  Q
    ||||||||| |||||| |||||||  ||| |||||||||||||    |||| ||||||||||||||||||| ||   ||| | |||||||||||||||||    
T  11056922 tattgttttggtttttgtgtcaattgctccttttctttgtaaattaaatttatggttgtctcaaaagttgttatacaaatggttgttcaaataacacaac 11056823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 358 - 473
Target Start/End: Complemental strand, 32587810 - 32587693
Alignment:
Q  358 atactcacattatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgt 455  Q
    |||||||||||||||||||| |  |||| ||||| ||| |||||| || |||||  ||||||||||||||||  | |||||||  || |  ||||||| |    
T  32587810 atactcacattatgtttttaatttctctctattgctttggtttttgtgccaatatttcattttctttgtaaatctctggttgttccatagtttgtcatat 32587711  T
Q  456 gaatagatgttcaaataa 473  Q
    |||| | |||||||||||    
T  32587710 gaatggttgttcaaataa 32587693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 333 - 379
Target Start/End: Complemental strand, 42672874 - 42672828
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    |||||||||||||| ||| ||||| ||| ||||||||||||||||||    
T  42672874 aatttttgtgacaaatttttctctcatattcacattatgtttttact 42672828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 331 - 377
Target Start/End: Original strand, 43720411 - 43720457
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta 377  Q
    |||||||||||||||||||| ||||| ||||| ||||||| ||||||    
T  43720411 acaatttttgtgacaattttctctctaatacttacattatattttta 43720457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 367 - 450
Target Start/End: Original strand, 46574324 - 46574409
Alignment:
Q  367 ttatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgt 450  Q
    |||||||||||||  |||| ||||||||| ||||   |||||||||||  |||||||| |||| || ||||||||||||| |||||    
T  46574324 ttatgtttttactttctctctattgttttggtttccgtgtcaatacctacttttctttctaaatttatggttgtctcaaacgttgt 46574409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 391 - 477
Target Start/End: Complemental strand, 46965987 - 46965901
Alignment:
Q  391 tttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    |||||||||| |||||||||||  ||||||||||||| || || |||||  |||||||||||    ||| | |||||||||||||||    
T  46965987 tttagtttttgtgtcaatacctacttttctttgtaaatttatgattgtcctaaaagttgtcacacaaattgttgttcaaataacaca 46965901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 300 - 431
Target Start/End: Complemental strand, 41443263 - 41443128
Alignment:
Q  300 agagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttag 395  Q
    ||||||||||||||| ||| ||||       |||| |||||||| |||||| ||||| |||||||||||||  |||||    |||||| |||||||||      
T  41443263 agagaaatgatatttgaacgatcactttttgacaacttttgtgataattttctctctcatactcacattattcttttactttctctctctattgttttga 41443164  T
Q  396 tttttatgtcaatacctcattttctttgtaaaattt 431  Q
    ||||| ||  ||||||| | |||||||||| |||||    
T  41443163 tttttgtgcaaatacctaaatttctttgtataattt 41443128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 2e-32; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 337 - 481
Target Start/End: Complemental strand, 11253578 - 11253430
Alignment:
Q  337 tttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaatttt 432  Q
    |||||||||| ||| ||||| ||||| ||||||| ||||||    |||||| ||||| ||| |||||| |||||||||||||||||||||||||||||||    
T  11253578 tttgtgacaactttctctctcatacttacattatctttttattttctctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaatttt 11253479  T
Q  433 ggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||| ||| ||||||||||||| |  |||||||||||||||| |||||||    
T  11253478 ggtcgtcacaaaagttgtcatatttatagatgttcaaataatacaactc 11253430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 301 - 481
Target Start/End: Original strand, 7598708 - 7598891
Alignment:
Q  301 gagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttactctct----atattgttttagt 396  Q
    |||||||||||||| ||||| ||       |||| ||||||||| | ||| ||||| |||||||||||||||||||||| |||    |||||||||| ||    
T  7598708 gagaaatgatatttgaacaaccattttttgacaacttttgtgaccactttctctctcatactcacattatgtttttactttctcaatatattgttttggt 7598807  T
Q  397 ttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||||||||||| ||||||| ||| ||||||||||||||||||||||| |||| | | |  ||||||||||||||||||||    
T  7598808 ttttatgtcaataccttattttctatgt-aaattttggttgtctcaaaagttttcatataattgaatgttcaaataacacaactc 7598891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 378 - 481
Target Start/End: Original strand, 29025340 - 29025443
Alignment:
Q  378 ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    |||||| ||||| ||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||| |||||| ||||||||||    
T  29025340 ctctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgtttaaataacaca 29025439  T
Q  478 actc 481  Q
    ||||    
T  29025440 actc 29025443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 34186636 - 34186790
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||| ||||||||||||||| ||||||    |||||| ||||  ||| |||||| ||||| |||||||||| ||||| ||    
T  34186636 acaacttttgtgacaactttctcttttatactcacattatctttttattttctctctctattactttggtttttgtgtcactacctcatttcctttgcaa 34186735  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||| ||||| ||||||||||||  || || |||||||||||||||||||||    
T  34186736 aattttgattgtcacaaaagttgtcacatgtatggatgttcaaataacacaactc 34186790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 336 - 481
Target Start/End: Complemental strand, 37133899 - 37133750
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttactctctat----attgttttagtttttatgtcaatacctcattttctttgtaaaattt 431  Q
    ||||||||||| ||| ||||| | ||||| |||||||||||||| ||| |    |||| |||  ||||| ||||||||  ||||||||||||||||||||    
T  37133899 ttttgtgacaactttttctctcacactcatattatgtttttactttctctttctattgctttgatttttgtgtcaatatatcattttctttgtaaaattt 37133800  T
Q  432 tggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||| ||||||||||||| | ||| |||||| ||||||||||||||    
T  37133799 tggttgtcacaaaagttgtcatctaaatggatgttaaaataacacaactc 37133750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 22719469 - 22719623
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||||||| ||||| || |||||||||| ||||||||    |||| ||||| ||| |||||| ||  | |||||||||||||||||||    
T  22719469 acaacttttgtgacaattttctctctcatgctcacattatctttttactttctctctctattgctttggtttttgtgcaactacctcattttctttgtaa 22719568  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||||| || ||||||||||||  |  || | |||||||||||||||||||    
T  22719569 aattttggttatcacaaaagttgtcacatatatggctgttcaaataacacaactc 22719623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 341 - 481
Target Start/End: Complemental strand, 5740817 - 5740673
Alignment:
Q  341 tgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggtt 436  Q
    |||||| ||| ||||| ||||||||||||||||||||||    |||| ||||||||| |||||| |||| ||||||| |||||||||||||||| |||||    
T  5740817 tgacaactttttctctcatactcacattatgtttttactttctctctctattgttttggtttttgtgtcgatacctctttttctttgtaaaattatggtt 5740718  T
Q  437 gtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||  ||||||||||     ||| | |||||||||||||||||||    
T  5740717 gtcctaaaagttgtctataaaatggctgttcaaataacacaactc 5740673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 331 - 485
Target Start/End: Original strand, 32133357 - 32133510
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    ||||||||| |||||| ||| |||||  || ||||||||||||||||||  |||| ||||||||| | | |   |||||||||| ||||| |||||||||    
T  32133357 acaatttttttgacaactttctctctcttattcacattatgtttttactttctctctattgttttggatgt---gtcaataccttattttatttgtaaaa 32133453  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactcgttt 485  Q
    |||||||| |||||||| || |||| | ||| |||||||||||||||||||| ||||    
T  32133454 ttttggttatctcaaaatttatcatataaatggatgttcaaataacacaactggttt 32133510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 337 - 481
Target Start/End: Original strand, 42768241 - 42768387
Alignment:
Q  337 tttgtgacaattttgtctcttatactcacattatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttgg 434  Q
    |||||||||| ||| ||||| ||||||||||||| ||||||||  |||| ||||| ||| |||||| ||||| | |||||||| |||||||||||||| |    
T  42768241 tttgtgacaactttttctctcatactcacattatttttttactttctctctattgctttggtttttgtgtcactgcctcatttcctttgtaaaattttag 42768340  T
Q  435 ttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||| ||||| || |||  |  || |||||||||||||||||||||    
T  42768341 ttgtcacaaaaattatcacatatatggatgttcaaataacacaactc 42768387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 7271881 - 7272033
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttactctctat--attgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||| ||||||||||| ||| ||||| ||||||||||||  |||||||||||| |  |||| ||| |||||| ||||| || |||||||  |||| ||||    
T  7271881 acaacttttgtgacaactttatctctcatactcacattaattttttactctctctctattgctttggtttttgtgtcactatctcatttcttttgcaaaa 7271980  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||| ||||| ||||||||||||  || || |||||||| ||||||||||||    
T  7271981 ttttgattgtcacaaaagttgtcacatgtatggatgttcatataacacaactc 7272033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 336 - 481
Target Start/End: Complemental strand, 12898966 - 12898817
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattt 431  Q
    ||||||||||| ||| ||||| ||||||||||||| ||||||||    |||| ||||| ||| ||||||  | || || ||||||| |||||||||||||    
T  12898966 ttttgtgacaactttttctctcatactcacattatctttttactttatctctctattgctttggtttttgcgccactatctcatttcctttgtaaaattt 12898867  T
Q  432 tggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||| ||||||||||||  |  || ||||||||||||||| |||||    
T  12898866 tggttgtcacaaaagttgtcacatatatggatgttcaaataacataactc 12898817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 336 - 481
Target Start/End: Complemental strand, 23754743 - 23754594
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattt 431  Q
    ||||||||||| ||| ||| | ||||||| ||||| ||||||||    |||  ||||||||| |||||| |||||||  |||||||||||||||||||||    
T  23754743 ttttgtgacaactttctctttcatactcatattatatttttactttatctcactattgttttggtttttgtgtcaatcactcattttctttgtaaaattt 23754644  T
Q  432 tggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||  |||| |||||||| | ||   ||||||||||||||||||||    
T  23754643 tggttgttgcaaaggttgtcatataaaataatgttcaaataacacaactc 23754594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 335 - 436
Target Start/End: Complemental strand, 24503261 - 24503158
Alignment:
Q  335 tttttgtgacaattttgtctcttatactcacattatgtttttactctcta--tattgttttagtttttatgtcaatacctcattttctttgtaaaatttt 432  Q
    |||||||||||||| | ||||| ||||| |||||||||||||||| |||   |||||||||||||||| |||||||| ||| |||||||||||||||| |    
T  24503261 tttttgtgacaattgtatctctcatacttacattatgtttttactttctcattattgttttagtttttgtgtcaataactctttttctttgtaaaattat 24503162  T
Q  433 ggtt 436  Q
    ||||    
T  24503161 ggtt 24503158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 332 - 481
Target Start/End: Original strand, 34639563 - 34639716
Alignment:
Q  332 caatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaa 427  Q
    |||||||||||  |||||| ||||| ||| ||||||||||| ||||    |||||| ||||  ||| ||| || ||||| ||||||||||| ||||||||    
T  34639563 caatttttgtgctaattttctctctcatattcacattatgtgtttattttctctctctattactttggttattgtgtcactacctcattttatttgtaaa 34639662  T
Q  428 attttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||| || |||||||| || |||||| ||| ||||||||||||||| |||||    
T  34639663 attttgattctctcaaaaattatcatgtaaatggatgttcaaataacataactc 34639716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 340 - 475
Target Start/End: Complemental strand, 5277532 - 5277393
Alignment:
Q  340 gtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggt 435  Q
    ||||||| ||| ||||| ||||||||||||| ||||||||    |||| ||||| || ||||||| ||||| |||||||||| ||||||||||||||| |    
T  5277532 gtgacaactttatctctcatactcacattatctttttactttctctctctattgcttaagtttttgtgtcactacctcatttcctttgtaaaattttgat 5277433  T
Q  436 tgtctcaaaagttgtcatgtgaatagatgttcaaataaca 475  Q
    |||| || || ||||||  || || |||||||||||||||    
T  5277432 tgtcacataaattgtcacatgtatggatgttcaaataaca 5277393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 333 - 480
Target Start/End: Complemental strand, 36660490 - 36660339
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    ||||||||| |||| ||| ||||| ||||| ||||||| ||||||||    |||| ||||| ||| ||| || ||||||||| ||||||||||| |||||    
T  36660490 aatttttgtaacaactttctctctcatacttacattatctttttactttctctctctattgctttggttattgtgtcaatacttcattttctttataaaa 36660391  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaact 480  Q
    ||||| ||||| |||||||| |||  |  || ||||||||||||||||||||    
T  36660390 ttttgattgtcacaaaagttatcacatttatggatgttcaaataacacaact 36660339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 331 - 478
Target Start/End: Complemental strand, 36816658 - 36816507
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||||||||||| || ||| | ||||||||||||| ||||||||    |||| ||||| |||  ||||| ||| ||||| |||||||||||| ||    
T  36816658 acaacttttgtgacaatcttctctatcatactcacattatctttttactttttctctctattgctttgatttttgtgttaatacgtcattttctttgcaa 36816559  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaa 478  Q
    ||||||| || || ||||||||||||  |  |||||||||||||||||||||    
T  36816558 aattttgattatcacaaaagttgtcacatatatagatgttcaaataacacaa 36816507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 27325787 - 27325941
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||| |||||||||| || ||||||||    |||| ||||| ||| |||||| || || |||||||||| ||||||||    
T  27325787 acaacttttgtgacaactttctctctcatactcacatgatctttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaa 27325886  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||| || || | ||||||||||  |  || |||||||||||||||||||||    
T  27325887 aattttgattatcacgaaagttgtcacatatatggatgttcaaataacacaactc 27325941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 331 - 439
Target Start/End: Complemental strand, 31249566 - 31249454
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||||||| ||||| ||||||||||||| ||||||    |||||| ||||| ||| |||||| |  || |||||||||| ||||||||    
T  31249566 acaacttttgtgacaattttttctctcatactcacattatctttttactttctctctctattgctttggtttttgtaccactacctcatttcctttgtaa 31249467  T
Q  427 aattttggttgtc 439  Q
    |||||||||||||    
T  31249466 aattttggttgtc 31249454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 343 - 478
Target Start/End: Complemental strand, 32501226 - 32501087
Alignment:
Q  343 acaattttgtctcttatactcacattatgtttttac----tctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgt 438  Q
    |||||||| ||||| ||||||||||||| |||||||    ||||| ||||  |||  ||||| ||||| |||||||||| ||||||||||||||||||||    
T  32501226 acaattttctctctcatactcacattatttttttacgttctctctctattactttgatttttgtgtcactacctcatttcctttgtaaaattttggttgt 32501127  T
Q  439 ctcaaaagttgtcatgtgaatagatgttcaaataacacaa 478  Q
    | ||||| || |||  |  || ||||||||||||||||||    
T  32501126 cacaaaaattctcacatatatggatgttcaaataacacaa 32501087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 358 - 476
Target Start/End: Complemental strand, 27854781 - 27854661
Alignment:
Q  358 atactcacattatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgt 455  Q
    ||||||||||||||||||||||  |||| |||||||||  ||||| || |||||  | |||||||||||||||||||  |||||| ||||||| |||||     
T  27854781 atactcacattatgtttttactttctctctattgttttgatttttgtgccaatatttaattttctttgtaaaattttaattgtcttaaaagttatcatga 27854682  T
Q  456 gaatagatgttcaaataacac 476  Q
     |||  |||||||||||||||    
T  27854681 aaatgaatgttcaaataacac 27854661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 331 - 477
Target Start/End: Original strand, 43397810 - 43397960
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttactctctat----attgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||||| |||| ||| ||||| ||||||||||||| |||||||| ||| |    |||  ||| |||||| || || || ||||||||||||||||    
T  43397810 acaacttttgttacaactttctctctcatactcacattatttttttactttctctttctattactttggtttttgtgccactatctcattttctttgtaa 43397909  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    ||||||||||||| |||||| |||||  || || ||||||||| |||||||    
T  43397910 aattttggttgtcacaaaagctgtcacatgtatggatgttcaattaacaca 43397960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 10839523 - 10839370
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact--ctctat--attgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||  ||||| ||||| ||||||||||||||||  ||||||  |||| ||| |||||| || |||||  | |||||||||||||    
T  10839523 acaacttttgtgacaacttc-tctctcatacttacattatgtttttactttctctatctattgctttggtttttgtgccaatatttaattttctttgtaa 10839425  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||| |||||||||||| || ||||   ||| |||||||||||||||| ||||    
T  10839424 aattttagttgtctcaaaaattatcataaaaatggatgttcaaataacactactc 10839370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 331 - 452
Target Start/End: Complemental strand, 21526322 - 21526197
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||||| ||| |||| ||||| ||||||||||||||||||||||    |||| | ||| ||| | |||| || ||||||||| |||||||||| |    
T  21526322 acaacttttgtaacagttttctctctcatactcacattatgtttttactttctctctttgttgctttggattttgtgccaatacctctttttctttgtga 21526223  T
Q  427 aattttggttgtctcaaaagttgtca 452  Q
    |||| |||||||| ||||||||||||    
T  21526222 aattatggttgtcccaaaagttgtca 21526197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 4054277 - 4054174
Alignment:
Q  378 ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    |||||| ||||| ||| |||||| ||||| ||||||||||  |||||||| ||||| ||||| ||||||||||||  |  ||| ||||||||||||||||    
T  4054277 ctctctttattgctttggtttttgtgtcactacctcatttcatttgtaaagttttgattgtcacaaaagttgtcacatatataaatgttcaaataacaca 4054178  T
Q  478 actc 481  Q
    ||||    
T  4054177 actc 4054174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 358 - 453
Target Start/End: Complemental strand, 43632351 - 43632254
Alignment:
Q  358 atactcacattatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcat 453  Q
    |||||||||| |||||||||||  |||| ||||| ||| |||||| ||||||||||||||||| ||||||||  | || |||| ||||||||||||||    
T  43632351 atactcacatcatgtttttacttcctctctattgctttggtttttgtgtcaatacctcattttatttgtaaatctatgattgtatcaaaagttgtcat 43632254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 378 - 487
Target Start/End: Original strand, 13106560 - 13106669
Alignment:
Q  378 ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    |||||| ||||| |||  ||||| |||||||||||| ||||||||||||| || |||||||   |||||||||||  | ||| | |||||||||||||||    
T  13106560 ctctctctattgctttgctttttgtgtcaatacctctttttctttgtaaatttatggttgttataaaagttgtcacctaaatggttgttcaaataacaca 13106659  T
Q  478 actcgtttaa 487  Q
    |||| |||||    
T  13106660 actcttttaa 13106669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 37449467 - 37449313
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttactctctat----attgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||| ||||||||||||| |||||||| ||| |    |||| ||| |||||| ||  | |||||||||| ||||||||    
T  37449467 acaacttttgtgacaactttttctctcatactcacattatctttttactttctgtctctattgctttggtttttgtgctactacctcatttcctttgtaa 37449368  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||| || || |||||||| |||  |  || ||| |||||||||||||||||    
T  37449367 aattttgattatcacaaaagttatcacatatatggatattcaaataacacaactc 37449313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 333 - 481
Target Start/End: Original strand, 10902736 - 10902882
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    ||||||||| |||| ||| ||||| | ||||||||||||||||||    |||||| ||||| |||  ||||| || |||||| |||||||||||||||||    
T  10902736 aatttttgtaacaactttctctctcacactcacattatgtttttactttctctctctattgctttgatttttgtgccaatacatcattttctttgtaaaa 10902835  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||      || ||||| ||||||| | ||| ||| |||||||||||||||||    
T  10902836 ttt------tcacaaaaattgtcatctaaatggatattcaaataacacaactc 10902882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 331 - 439
Target Start/End: Complemental strand, 12735053 - 12734941
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttac----tctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||||||| ||||| ||||||| |||||||||||||    ||||||||||  |||  ||||| |||||||||||  ||||| ||||||    
T  12735053 acaacttttgtgacaattttctctctcatactcatattatgtttttaccttatctctatattactttgatttttgtgtcaatacctacttttcattgtaa 12734954  T
Q  427 aattttggttgtc 439  Q
    | |||| ||||||    
T  12734953 atttttagttgtc 12734941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 331 - 452
Target Start/End: Complemental strand, 37942948 - 37942825
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||||||||||||||| ||| ||| | ||| | ||||||| ||||||||    |||| |||||||||||||||||||||||||  ||  ||| ||| |||    
T  37942948 acaatttttgtgacaactttttctttcatatttacattatatttttactttctctctctattgttttagtttttatgtcaatatatc--tttttttttaa 37942851  T
Q  427 aattttggttgtctcaaaagttgtca 452  Q
    |||| |||||||| || |||||||||    
T  37942850 aattatggttgtcccagaagttgtca 37942825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 7777221 - 7777173
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    |||||||||||||||| ||| ||||||||||||||||||| ||||||||    
T  7777221 acaatttttgtgacaactttctctcttatactcacattatatttttact 7777173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 42786701 - 42786653
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    |||||||||||||||| ||| ||||||||||||||||||| ||||||||    
T  42786701 acaatttttgtgacaactttctctcttatactcacattatatttttact 42786653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 331 - 453
Target Start/End: Original strand, 7535711 - 7535834
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttactctctatattg-ttttagtttttatgtcaatacctcattttctttgtaaaat 429  Q
    |||| |||||||| || ||| ||| |||| |||||||| || ||||||| ||| | ||  ||||||||||| ||| |||||||||||||||||||||| |    
T  7535711 acaacttttgtgataactttctcttttatgctcacattctgattttactttctctctttattttagtttttgtgttaatacctcattttctttgtaaatt 7535810  T
Q  430 tttggttgtctcaaaagttgtcat 453  Q
    | || ||||| || || |||||||    
T  7535811 tatgattgtcccataaattgtcat 7535834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 331 - 439
Target Start/End: Original strand, 10731575 - 10731687
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||||| |||| ||| ||| ||||||||| ||||| ||||||||    |||| ||||| |||  ||||| ||||||||| |||||| ||||||||    
T  10731575 acaacttttgtaacaactttctcttttatactcatattatctttttactttctctctctattgctttgatttttgtgtcaatacttcatttcctttgtaa 10731674  T
Q  427 aattttggttgtc 439  Q
    ||||||| |||||    
T  10731675 aattttgattgtc 10731687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 402 - 481
Target Start/End: Original strand, 24479327 - 24479406
Alignment:
Q  402 tgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||| ||||||| |||||||||||||| |||||| |||||||| |||| |  ||  ||| ||||||||||||||||    
T  24479327 tgtcaatatctcatttcctttgtaaaattttagttgtcacaaaagttatcatatatatgaatgctcaaataacacaactc 24479406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 337 - 409
Target Start/End: Original strand, 43419903 - 43419979
Alignment:
Q  337 tttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaata 409  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    || | |||||||||  ||||||||||||||    
T  43419903 tttgtgacaattttctctcttatacttacattatgtttttactttttctttttattgttttgttttttatgtcaata 43419979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 414 - 473
Target Start/End: Original strand, 44415808 - 44415867
Alignment:
Q  414 attttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataa 473  Q
    ||||||||  ||||||||| |||||||||||||||||||||  ||| |||||||||||||    
T  44415808 attttcttcataaaattttagttgtctcaaaagttgtcatgaaaattgatgttcaaataa 44415867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 336 - 430
Target Start/End: Complemental strand, 6511896 - 6511800
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaatt 430  Q
    |||||||| || ||| ||||| ||||| | |||||||||||| |  |||| |||| ||||||||||| |||||||||||| ||| |||| |||||||    
T  6511896 ttttgtgataactttctctctcatacttatattatgtttttattttctctctattattttagtttttgtgtcaatacctcttttcctttataaaatt 6511800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 385 - 473
Target Start/End: Original strand, 34796471 - 34796557
Alignment:
Q  385 tattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataa 473  Q
    ||||||||| |||||| ||||||||| |  ||||| || ||||||||||||||||| |||||||||||| | | | | |||||||||||    
T  34796471 tattgttttggtttttgtgtcaatacat--ttttcgttataaaattttggttgtcttaaaagttgtcatataattggttgttcaaataa 34796557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 7795346 - 7795298
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    |||| ||||||||||||||| ||||||||||| ||||||| ||||||||    
T  7795346 acaacttttgtgacaattttctctcttatacttacattatatttttact 7795298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 333 - 377
Target Start/End: Original strand, 28756567 - 28756611
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgttttta 377  Q
    |||||||||||||||||| ||||| ||||||||||||| ||||||    
T  28756567 aatttttgtgacaattttatctctcatactcacattatattttta 28756611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 336 - 452
Target Start/End: Original strand, 39211076 - 39211195
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttac----tctctatattgttttagtttttatgtcaatacctcat-tttctttgtaaaatt 430  Q
    |||| |||||| ||| ||||| ||||||||||| |||||||||    ||||| ||||||||| |||||| |||||||| ||||| ||||||||| | |||    
T  39211076 ttttttgacaactttctctctcatactcacattttgtttttactttttctctctattgttttggtttttgtgtcaata-ctcatatttctttgt-atatt 39211173  T
Q  431 ttggttgtctcaaaagttgtca 452  Q
    | | |||||||| |||||||||    
T  39211174 tagattgtctcacaagttgtca 39211195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 439
Target Start/End: Original strand, 6440111 - 6440223
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||| ||||||||||||| ||||||||    |||| | ||| |||  ||||| ||||||||| |  ||||||||||||    
T  6440111 acaacttttgtgacaactttctctctcatactcacattatatttttactttctctctttcttgctttgatttttgtgtcaatacatacttttctttgtaa 6440210  T
Q  427 aattttggttgtc 439  Q
    || | ||||||||    
T  6440211 aaatatggttgtc 6440223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 410
Target Start/End: Complemental strand, 7603705 - 7603626
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttactctctatattgttttagtttttatgtcaatac 410  Q
    |||| ||||||||||||||| | | | |||||||| ||||||||||| ||||| ||||| | |||||||  |||||||||    
T  7603705 acaacttttgtgacaattttctttttcatactcactttatgtttttattctctctattgctatagttttcgtgtcaatac 7603626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 439
Target Start/End: Original strand, 35067190 - 35067302
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||| ||||||||||||| ||||||    |||||| ||||| ||| |||||| || ||| || |  ||||||||||||    
T  35067190 acaacttttgtgacaactttctctctcatactcacattatatttttactttctctctctattgctttggtttttgtgccaacacatacttttctttgtaa 35067289  T
Q  427 aattttggttgtc 439  Q
    || | ||||||||    
T  35067290 aaatatggttgtc 35067302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 336 - 428
Target Start/End: Complemental strand, 43285999 - 43285903
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    ||||||||||| ||| ||||| ||||||||||||| ||||||    |||||| ||||| ||| |||||||| ||||||| |  |||||||| |||||    
T  43285999 ttttgtgacaactttctctctcatactcacattatatttttactttctctctttattgctttggtttttatatcaatacatatttttctttctaaaa 43285903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 407 - 473
Target Start/End: Complemental strand, 3381532 - 3381467
Alignment:
Q  407 atacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataa 473  Q
    |||| ||||||||||||||||| ||||||||| |||| ||||||||| | ||| ||||||| |||||    
T  3381532 atacttcattttctttgtaaaa-tttggttgtatcaagagttgtcatataaatggatgttctaataa 3381467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 341 - 383
Target Start/End: Original strand, 7559357 - 7559399
Alignment:
Q  341 tgacaattttgtctcttatactcacattatgtttttactctct 383  Q
    |||||||||| ||||| |||||||||||||||||||| |||||    
T  7559357 tgacaattttctctctcatactcacattatgtttttattctct 7559399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 7678767 - 7678813
Alignment:
Q  337 tttgtgacaattttgtctcttatactcacattatgtttttactctct 383  Q
    |||||||||||||| ||||| ||||||||||||| |||||| |||||    
T  7678767 tttgtgacaattttctctctcatactcacattatatttttattctct 7678813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 341 - 383
Target Start/End: Complemental strand, 9048348 - 9048306
Alignment:
Q  341 tgacaattttgtctcttatactcacattatgtttttactctct 383  Q
    |||||||||| ||||| |||||||||||||||||||| |||||    
T  9048348 tgacaattttctctctcatactcacattatgtttttattctct 9048306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 333 - 379
Target Start/End: Original strand, 10692470 - 10692516
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    |||||||||||||| ||| ||||| ||||||||||||| ||||||||    
T  10692470 aatttttgtgacaactttatctctcatactcacattatctttttact 10692516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 333 - 440
Target Start/End: Original strand, 28756693 - 28756803
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttac----tctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||||||||||||||||| ||||| |||||| |||||| |||||||    ||||||||||||||| ||||   ||| ||||  | ||||||||||||||     
T  28756693 aatttttgtgacaattttatctctcatactc-cattatatttttactttttctctatattgttttggtttccgtgttaatatataattttctttgtaaat 28756791  T
Q  429 ttttggttgtct 440  Q
    || | |||||||    
T  28756792 ttatagttgtct 28756803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 397 - 475
Target Start/End: Original strand, 36251425 - 36251503
Alignment:
Q  397 ttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataaca 475  Q
    |||| ||||| |||||||||| ||||||||||||||| ||||| | |||||| |||  |  || |||||||||||||||    
T  36251425 ttttgtgtcactacctcatttcctttgtaaaattttgattgtcacgaaagttatcacatatatggatgttcaaataaca 36251503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 331 - 377
Target Start/End: Original strand, 36786802 - 36786848
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta 377  Q
    |||| ||||||||||| ||| ||||||||||||| ||||||||||||    
T  36786802 acaacttttgtgacaactttctctcttatactcaaattatgttttta 36786848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 333 - 379
Target Start/End: Complemental strand, 38708335 - 38708289
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    ||||||||| |||||||| | ||||||||||||||||| ||||||||    
T  38708335 aatttttgtaacaattttctttcttatactcacattatttttttact 38708289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 378 - 439
Target Start/End: Original strand, 2883268 - 2883329
Alignment:
Q  378 ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtc 439  Q
    |||||| | |||||||  ||||| ||| ||||| ||||||||||||||||||||| ||||||    
T  2883268 ctctctcttttgttttgatttttgtgttaatacttcattttctttgtaaaattttagttgtc 2883329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 416 - 481
Target Start/End: Complemental strand, 36969627 - 36969562
Alignment:
Q  416 tttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||| | |||||||| || |||||||||    ||| |||||||||||||||||||||    
T  36969627 tttctttgtaaaaatatggttgtcgcataagttgtcaaacaaatggatgttcaaataacacaactc 36969562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 372 - 481
Target Start/End: Original strand, 39856112 - 39856221
Alignment:
Q  372 tttttactctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaat 471  Q
    ||||| |||||| ||||| |||  ||||| |||||||| ||  |||||||||| || |  || |||||| ||||||| ||||   ||||| |||||||||    
T  39856112 ttttttctctctctattgctttgatttttgtgtcaatatctatttttctttgttaattcatgattgtcttaaaagttatcattaaaatagttgttcaaat 39856211  T
Q  472 aacacaactc 481  Q
    ||||||||||    
T  39856212 aacacaactc 39856221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 292 - 362
Target Start/End: Complemental strand, 42733645 - 42733575
Alignment:
Q  292 atttaaatagagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatact 362  Q
    |||||||  |||||||||||||| ||||| ||       |||||||||||||||||||| |||||||||||    
T  42733645 atttaaaatgagaaatgatatttgaacaaccatttttaaacaatttttgtgacaattttctctcttatact 42733575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 4e-31; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 7287231 - 7287077
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||| | ||||||||||||| ||||||||    |||| ||||||||| |||||| ||||| |||||||||||||||||||    
T  7287231 acaacttttgtgacaactttctctttcatactcacattatatttttactttctctctctattgttttggtttttgtgtcactacctcattttctttgtaa 7287132  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||| ||||||||||||  |  ||  ||||||||||||||||||||    
T  7287131 aattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 7287077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 7553007 - 7552855
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||| ||||||||||| ||| ||||| | ||||||||||||||||||||  |||| || ||  ||  ||||| ||||||||| |||||||||||| ||||    
T  7553007 acaacttttgtgacaactttctctctcacactcacattatgtttttactttctctctactgcattgatttttgtgtcaatacatcattttctttgcaaaa 7552908  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||| ||||||||||||| | ||| |||||||||||||||||||||    
T  7552907 ttttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaactc 7552855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 395 - 481
Target Start/End: Original strand, 17626083 - 17626169
Alignment:
Q  395 gtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  17626083 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 17626169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 335 - 481
Target Start/End: Original strand, 39591713 - 39591863
Alignment:
Q  335 tttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaatt 430  Q
    ||||||||| |||||| ||||  |||||||||||||||| |||||    |||| ||||| ||| |||| | |||||||  |||||||||||||||||| |    
T  39591713 tttttgtgataattttctctcacatactcacattatgttgttactttctctctctattgctttggtttgtgtgtcaatctctcattttctttgtaaaact 39591812  T
Q  431 ttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||| |||| |||||||| | |||||||||||||||||||||||||    
T  39591813 ttggttgtcacaaaggttgtcatataaatagatgttcaaataacacaactc 39591863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 335 - 481
Target Start/End: Original strand, 39592105 - 39592255
Alignment:
Q  335 tttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaatt 430  Q
    ||||||||| |||||| ||||  |||||||||||||||| |||||    |||| ||||| ||| |||| | |||||||  |||||||||||||||||| |    
T  39592105 tttttgtgataattttctctcacatactcacattatgttgttactttctctctctattgctttggtttgtgtgtcaatctctcattttctttgtaaaact 39592204  T
Q  431 ttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||| |||| |||||||| | |||||||||||||||||||||||||    
T  39592205 ttggttgtcacaaaggttgtcatataaatagatgttcaaataacacaactc 39592255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 333 - 481
Target Start/End: Original strand, 1671573 - 1671725
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttactctctat----attgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||||||||||||||||| ||| | ||||||| ||||| |||||||| ||| |    |||||||| |||||| ||||| |||||||||| ||||||||||    
T  1671573 aatttttgtgacaattttctctgtcatactcatattatctttttactttctctttctattgttttggtttttgtgtcagtacctcatttcctttgtaaaa 1671672  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||| ||||| ||||||||||||  |  || |||||||||||||||||||||    
T  1671673 ttttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 1671725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 331 - 478
Target Start/End: Original strand, 13309912 - 13310063
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    ||||||||||||| || ||| ||||| ||| ||||||||||||||||||    |||| || |  ||| |||||| ||| |||||||||||||||||||||    
T  13309912 acaatttttgtgataactttctctctcatattcacattatgtttttactttctctctctactactttggtttttgtgttaatacctcattttctttgtaa 13310011  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaa 478  Q
    || |||| ||||||||||| ||||||| | ||| ||||||||||||||||||    
T  13310012 aaatttgattgtctcaaaaattgtcatctaaatggatgttcaaataacacaa 13310063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 28306174 - 28306020
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||| ||||||||||||| || |||||    |||| ||||| ||| || ||| || || |||||||||||||||||||    
T  28306174 acaacttttgtgacaactttatctctcatactcacattatcttcttactttctctctctattgctttggtctttgtgccactacctcattttctttgtaa 28306075  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||| ||||||||||||  |  || |||||||||||||||||||||    
T  28306074 aattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 28306020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 33037549 - 33037703
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||| |||||| ||| ||||| ||||||||||||| ||||||||    |||| ||||| |||  ||||| ||||| |||||||||| ||||||||    
T  33037549 acaacttttatgacaactttctctctcatactcacattatctttttactttttctctctattgctttgatttttgtgtcactacctcatttcctttgtaa 33037648  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||| ||||||||||||  |  || |||||||||||||||||||||    
T  33037649 aattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 33037703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 378 - 481
Target Start/End: Original strand, 22972197 - 22972300
Alignment:
Q  378 ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    |||||| ||||||||| |||||| | | ||||||| ||||||||||||||||||| ||||||||||||||||| || | ||| |||||||||||||||||    
T  22972197 ctctctctattgttttggtttttgtattaataccttattttctttgtaaaattttagttgtctcaaaagttgttatataaatggatgttcaaataacaca 22972296  T
Q  478 actc 481  Q
    ||||    
T  22972297 actc 22972300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 5168212 - 5168366
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||| ||||||| ||| ||||| ||||||||||||| ||||||||    |||| ||||| |||  ||||| || || |||||||||||||||||||    
T  5168212 acaactttagtgacaactttatctctcatactcacattatctttttactttctctctctattgctttgatttttgtgccactacctcattttctttgtaa 5168311  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||| |||||| ||||||||||||| |  ||  ||||||||||||||||||||    
T  5168312 aattttagttgtcacaaaagttgtcatatatatgaatgttcaaataacacaactc 5168366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 333 - 481
Target Start/End: Complemental strand, 14051356 - 14051203
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgttttta-----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaa 427  Q
    |||||||||||||| ||| ||| ||||||||||||||| |||||      |||||| ||||||||| |||||| || || ||||||||||||||||||||    
T  14051356 aatttttgtgacaactttttcttttatactcacattattttttttactttctctctctattgttttggtttttgtgccactacctcattttctttgtaaa 14051257  T
Q  428 attttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||||||| |||||||| |||  |  || ||||||  |||||||||||||    
T  14051256 attttggttgtcacaaaagttatcacatatatggatgtttgaataacacaactc 14051203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 26791286 - 26791132
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||| || |||||||||| ||||||||    |||| ||||| ||| |||||| || || || ||||||| ||||||||    
T  26791286 acaacttttgtgacaactttctctctcatgctcacattatctttttactttctctctctattgctttggtttttgtgccactaactcatttcctttgtaa 26791187  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||| ||||||||||||  |  || |||||||||||||||||||||    
T  26791186 aattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 26791132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 41321284 - 41321438
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||||||||||||||| ||| | ||| ||||||||||||| ||| ||||    |||| ||||  ||| |||||| |||||||||||||||| ||||||||    
T  41321284 acaatttttgtgacaactttctttctcatactcacattatctttgtactttctctctctattactttggtttttgtgtcaatacctcatttcctttgtaa 41321383  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||| ||||| ||||||  |  || ||| |||||||||||||||||    
T  41321384 aattttggttgtcacaaaaattgtcacatatatggatattcaaataacacaactc 41321438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 333 - 452
Target Start/End: Complemental strand, 7076608 - 7076485
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||||||||||||||||| ||||| ||||||| ||||| ||||||||    |||| ||||| ||| |||||| || || ||| |||||| ||||||||||    
T  7076608 aatttttgtgacaattttctctctcatactcatattatttttttactttctctctctattgctttggtttttgtgccattacttcatttcctttgtaaaa 7076509  T
Q  429 ttttggttgtctcaaaagttgtca 452  Q
    ||||||||||| ||||||||||||    
T  7076508 ttttggttgtcacaaaagttgtca 7076485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 338 - 481
Target Start/End: Original strand, 36738984 - 36739131
Alignment:
Q  338 ttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttg 433  Q
    ||||||||| ||| ||||| ||||||||||||| ||||||||    |||| ||||| ||| |||||| ||||| ||||||||||  ||||||||||||||    
T  36738984 ttgtgacaactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtcactacctcatttcttttgtaaaattttg 36739083  T
Q  434 gttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||| ||||| || |||  |  || |||||||||||||||||||||    
T  36739084 gttgtcacaaaaattatcacatatatggatgttcaaataacacaactc 36739131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 404 - 481
Target Start/End: Original strand, 3565190 - 3565267
Alignment:
Q  404 tcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    | | |||||||||||||||||||||    
T  3565190 tcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcactcaagtggatgttcaaataacacaactc 3565267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 15479498 - 15479652
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||| |||||| ||| ||||| ||||| | ||||| ||||||||    |||| ||||||||| ||| || ||||||||||||||||| |||||||    
T  15479498 acaacttttatgacaactttctctctcatacttatattatctttttactttctctctctattgttttggttattttgtcaatacctcattttttttgtaa 15479597  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||  ||||| ||||||||||||  |  || |||||||||||||||||||||    
T  15479598 aattttaattgtcacaaaagttgtcacatttatggatgttcaaataacacaactc 15479652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 339 - 480
Target Start/End: Original strand, 1764261 - 1764406
Alignment:
Q  339 tgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttgg 434  Q
    |||||||| ||| ||||| ||||||||||| | ||||||||    |||| ||||| ||| ||||||||| || |||||||||| |||| |||||||||||    
T  1764261 tgtgacaactttctctctcatactcacattttctttttactttctctctttattgctttggtttttatgccactacctcatttcctttctaaaattttgg 1764360  T
Q  435 ttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaact 480  Q
    ||||| ||||||||||||  |  ||  |||||||||||||||||||    
T  1764361 ttgtcacaaaagttgtcacatatatgaatgttcaaataacacaact 1764406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 340 - 481
Target Start/End: Complemental strand, 18258826 - 18258681
Alignment:
Q  340 gtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggt 435  Q
    ||||||| ||| ||||| ||||| ||||||| |||||| |    |||||||||  ||| |||||| || || |||||||||| |||||||||||||||||    
T  18258826 gtgacaactttctctctcatacttacattatctttttattttttctctatatttctttggtttttgtgccactacctcatttcctttgtaaaattttggt 18258727  T
Q  436 tgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||| ||||||||||||  |  || |||||||||||||||||||||    
T  18258726 tgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 18258681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 35634878 - 35634723
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcatttt-ctttgta 425  Q
    |||| |||||| |||| ||| ||||||||||| ||||||| ||||||    |||||| ||||||||| |||||| || |||||  ||||||| |||||||    
T  35634878 acaacttttgttacaactttctctcttatacttacattatctttttagtttctctctctattgttttggtttttgtgccaataattcattttcctttgta 35634779  T
Q  426 aaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||| ||  |||||||||||  |  || |||||||||||||||||||||    
T  35634778 aaattttggttatcataaaagttgtcacatatatggatgttcaaataacacaactc 35634723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 300 - 473
Target Start/End: Original strand, 27487886 - 27488062
Alignment:
Q  300 agagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttag 395  Q
    ||||||||||||||| ||||||||       |||| ||||||||||||||  ||| |||||||||| |||||| ||||||    |||| ||||| ||| |    
T  27487886 agagaaatgatatttgaacaatcaatttttaacaacttttgtgacaatttc-tcttttatactcacgttatgtatttactttctctctctattgctttgg 27487984  T
Q  396 tttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataa 473  Q
    ||||| || |||||  | ||||||||||||||||||| ||| |||||||| || ||||   |||||||||||||||||    
T  27487985 tttttgtgccaatatttaattttctttgtaaaattttagttatctcaaaaattatcataaaaatagatgttcaaataa 27488062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 1274387 - 1274540
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||| | ||||||||||||  ||||||||    |||| ||||| ||| |||||| |||||||| ||||||  ||||||||    
T  1274387 acaacttttgtgacaactttatctttcatactcacattacctttttacttcctctctctattgctttggtttttgtgtcaatatctcattccctttgtaa 1274486  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||| |  |||||||||||  |  || |||||||||||||||||||||    
T  1274487 aattttggttg-cataaaagttgtcacatatatggatgttcaaataacacaactc 1274540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 333 - 478
Target Start/End: Original strand, 2972354 - 2972504
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattat-gtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaa 427  Q
    ||||||||| |||| ||| | ||| ||||||||||||| |||||||||    |||| ||||| |||  ||||| |||||||||||||||| ||| || ||    
T  2972354 aatttttgttacaactttctttctcatactcacattatcgtttttactttctctctctattgctttgatttttgtgtcaatacctcatttccttcgtgaa 2972453  T
Q  428 attttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaa 478  Q
    |||||| ||||| ||||||||||||  |  ||| |||||||||||||||||    
T  2972454 attttgattgtcacaaaagttgtcacatatataaatgttcaaataacacaa 2972504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 331 - 417
Target Start/End: Complemental strand, 22649703 - 22649613
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattt 417  Q
    |||||||||||||||||||| ||||| ||||||||||||| ||||||    ||||| |||||| |||||||||| ||||| ||||||||||    
T  22649703 acaatttttgtgacaattttctctctcatactcacattatctttttactttctctccatattgctttagtttttgtgtcactacctcattt 22649613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 333 - 479
Target Start/End: Original strand, 39054618 - 39054768
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    ||||||| |||||| ||| ||| | | ||||||||||||||||||||    |||| ||||| |||  ||||| ||  ||||  |||||||||||| ||||    
T  39054618 aatttttttgacaactttctctttcacactcacattatgtttttactttctctctctattgctttgatttttgtgcaaatatatcattttctttgcaaaa 39054717  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaac 479  Q
    ||||| || || ||||||||||||| | ||| |||||||||||||||||||    
T  39054718 ttttgattatcacaaaagttgtcatctaaatggatgttcaaataacacaac 39054768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 331 - 432
Target Start/End: Complemental strand, 1079994 - 1079889
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttactctct----atattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||||||||||||||| ||| ||||| ||| ||||||||| |||||||| |||    |||||| ||| | |||| || ||||||||||||||||||||||    
T  1079994 acaatttttgtgacaactttctctctcatattcacattatctttttactttctttctatattgctttggattttgtgccaatacctcattttctttgtaa 1079895  T
Q  427 aatttt 432  Q
    ||||||    
T  1079894 aatttt 1079889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 385 - 481
Target Start/End: Original strand, 8686978 - 8687074
Alignment:
Q  385 tattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||| ||||   |||||||||||  |  ||  ||||||||||||||| ||||    
T  8686978 tattgttttggtttttgtgtcaatacctcattttctttgtaaaattttgattgttataaaagttgtcacatatatgaatgttcaaataacactactc 8687074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 336 - 481
Target Start/End: Complemental strand, 19844345 - 19844198
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttg 433  Q
    |||||||| || ||| ||||| |||  |||||||||||||||||  |||| ||||| ||| |||| | || ||||||||| |||||||||||||||| ||    
T  19844345 ttttgtgataactttctctctcatatccacattatgtttttactttctctctattgctttggtttgtgtgccaatacctctttttctttgtaaaattatg 19844246  T
Q  434 gttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||| |||| || |||    ||||  |||||||||||||||||||    
T  19844245 gttgtcttaaaaattatcaatcaaatatttgttcaaataacacaactc 19844198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 336 - 481
Target Start/End: Complemental strand, 28467490 - 28467341
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttactctcta----tattgttttagtttttatgtcaatacctcattttctttgtaaaattt 431  Q
    ||||||||||| ||| | | ||||||||||||||| |||||||| |||     ||||||||| |||||| ||||| | |||||||| |||| ||||||||    
T  28467490 ttttgtgacaactttcttttttatactcacattatctttttactttctcactctattgttttggtttttgtgtcactgcctcatttcctttataaaattt 28467391  T
Q  432 tggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||| ||||| ||||||  |  ||  ||||||| ||||||||||||    
T  28467390 tggttgtcacaaaaattgtcacatatatgaatgttcagataacacaactc 28467341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 331 - 477
Target Start/End: Complemental strand, 24405996 - 24405847
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttactctc---tatattgttttagtttttatgtcaatacctcattttctttgtaaa 427  Q
    ||||||||||||| || ||| ||||||||||| |||||||||||||||| ||   | ||||||||| ||||   | ||||||| |  |||||||||||||    
T  24405996 acaatttttgtgataactttctctcttatactaacattatgtttttactttctcttctattgttttggtttcggtatcaatacatatttttctttgtaaa 24405897  T
Q  428 attttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
     || | ||||| |||||||||||||    ||||| |||||||||||||||    
T  24405896 tttatagttgtttcaaaagttgtcaaacaaatagttgttcaaataacaca 24405847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 300 - 477
Target Start/End: Original strand, 27546062 - 27546245
Alignment:
Q  300 agagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttac------tctctatattgtttt 393  Q
    ||||||||||||||| ||||||||       |||| ||||||||||| ||| | ||| ||||||||||||| |||||||      ||||||| ||| |||    
T  27546062 agagaaatgatatttgaacaatcattttatgacaaattttgtgacaactttatttctcatactcacattatatttttactttatatctctattttgcttt 27546161  T
Q  394 agtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
      |||||||||||||| ||  ||||||||||| | || || ||||||||||||||||||    ||||| | |||||||||||||    
T  27546162 gatttttatgtcaatatctatttttctttgtacatttatgattgtctcaaaagttgtcacacaaatagttattcaaataacaca 27546245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 352 - 427
Target Start/End: Original strand, 6596383 - 6596460
Alignment:
Q  352 tctcttatactcacattatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaa 427  Q
    |||||| |||||||||||||||||||||  |||| ||||| ||| |||||| ||| ||||||||||||||||||||||    
T  6596383 tctcttgtactcacattatgtttttactttctctctattgctttggtttttgtgttaatacctcattttctttgtaaa 6596460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 300 - 452
Target Start/End: Complemental strand, 33958332 - 33958176
Alignment:
Q  300 agagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttag 395  Q
    ||||||||||||||| ||||||||       | ||||||||||| || ||| | | | ||||||||||||| ||||||||    |||| ||||| ||| |    
T  33958332 agagaaatgatatttgaacaatcatttttggataatttttgtgataactttctatatcatactcacattatatttttactttctctctctattgctttgg 33958233  T
Q  396 tttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtca 452  Q
    ||||| |||||||| ||| ||||||||||||| || ||||||||  |||||||||||    
T  33958232 tttttgtgtcaatatctctttttctttgtaaatttatggttgtcataaaagttgtca 33958176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 352 - 439
Target Start/End: Original strand, 35646433 - 35646524
Alignment:
Q  352 tctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtc 439  Q
    ||||| ||||||||||||| ||||||||    |||||||||| ||| |||||| ||||| |||||||||| |||||||||||||| ||||||    
T  35646433 tctctcatactcacattatttttttactttctctctatattgctttggtttttgtgtcactacctcatttcctttgtaaaattttagttgtc 35646524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 333 - 481
Target Start/End: Original strand, 34546448 - 34546599
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttt---tactctctatattgttttagtttttatgtcaatacctcattttctttgtaaaat 429  Q
    ||||||| |||||| ||| | ||| ||||||| ||||||||||   | || ||| ||||| |||  ||||||||||||||||||||||||||| || | |    
T  34546448 aatttttatgacaaatttctttctaatactcatattatgttttactttctatctctattgatttgatttttatgtcaatacctcattttctttatacatt 34546547  T
Q  430 tttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    | | |||||| ||||| |||||||   || || |||||||||||||||||||    
T  34546548 tatagttgtcccaaaaattgtcatacaaaaagttgttcaaataacacaactc 34546599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 342 - 427
Target Start/End: Original strand, 20270611 - 20270698
Alignment:
Q  342 gacaattttgtctcttatactcacattatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaa 427  Q
    ||||| ||| ||||| |||||||||||||||||||| |  |||| |||||||||  ||| | ||||||||||||||||||||||||||    
T  20270611 gacaactttatctctcatactcacattatgtttttaatttctctttattgttttgatttatgtgtcaatacctcattttctttgtaaa 20270698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 378 - 481
Target Start/End: Original strand, 14923153 - 14923256
Alignment:
Q  378 ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    |||||| ||||| ||| |||||| || || ||||||||||  ||||||||||||||||| || | ||||||||||  |  || |||||||||||||||||    
T  14923153 ctctctctattgctttggtttttgtgccactacctcatttcttttgtaaaattttggttttcacgaaagttgtcacatatatcgatgttcaaataacaca 14923252  T
Q  478 actc 481  Q
    ||||    
T  14923253 actc 14923256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 368 - 452
Target Start/End: Original strand, 21353212 - 21353298
Alignment:
Q  368 tatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtca 452  Q
    ||||||||||||  |||| ||||  |||||||||| ||| ||||| || |||||||||||||||| |||||||| ||||||||||||    
T  21353212 tatgtttttactttctctctattactttagtttttgtgttaatacatctttttctttgtaaaattatggttgtcccaaaagttgtca 21353298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 331 - 438
Target Start/End: Original strand, 18660788 - 18660899
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||||||| ||||| |||||||| |||| ||||||    |||||| ||||| ||| |||||| || |||||| |||||| ||||||||    
T  18660788 acaacttttgtgacaattttctctctcatactcacgttatctttttactttctctctctattgctttggtttttgtgccaatacttcatttcctttgtaa 18660887  T
Q  427 aattttggttgt 438  Q
    || |||| ||||    
T  18660888 aagtttgattgt 18660899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 336 - 439
Target Start/End: Original strand, 19952034 - 19952141
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttactctcta----tattgttttagtttttatgtcaatacctcattttctttgtaaaattt 431  Q
    ||||||||||| ||||||||| ||||||| |||||||||||||| ||||    |||||||||  |||    |||||||||| |||||||||||||| ||     
T  19952034 ttttgtgacaaatttgtctctcatactcatattatgtttttactttctatctctattgttttgatttccgcgtcaatacctaattttctttgtaaattta 19952133  T
Q  432 tggttgtc 439  Q
    ||||||||    
T  19952134 tggttgtc 19952141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 344 - 481
Target Start/End: Complemental strand, 33655443 - 33655301
Alignment:
Q  344 caattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtc-aatacctcattttctttgtaaaattttggttgt 438  Q
    ||||||| | |||||| || ||||||||||||||    |||  ||||||||||| |||||| | || ||||||||||||||||| |||| || |||||||    
T  33655443 caattttttatcttattcttacattatgtttttattttctcattatattgttttggtttttgtatcaaatacctcattttctttataaatttatggttgt 33655344  T
Q  439 ctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
      |||||||| ||||   ||||| | |||||||||||||||||    
T  33655343 accaaaagttatcataaaaatagttattcaaataacacaactc 33655301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 428
Target Start/End: Complemental strand, 6758832 - 6758731
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||||||||||||||| ||| ||||||||||||||||||| ||||||     ||||| ||||| ||| |||||  ||||||||| | |||||||||| ||    
T  6758832 acaatttttgtgacaactttctctcttatactcacattatatttttattttatctctctattgctttggttttcgtgtcaatacatgattttctttgaaa 6758733  T
Q  427 aa 428  Q
    ||    
T  6758732 aa 6758731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 333 - 477
Target Start/End: Original strand, 35567532 - 35567679
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    ||||||||||| || ||| ||||| ||| | ||||||| ||||||||    |||| ||||| |||   |||| |||||| |||| ||||| |||||||||    
T  35567532 aatttttgtgataactttctctctcatatttacattatatttttactttctctctctattgctttgaattttgtgtcaaaaccttattttatttgtaaaa 35567631  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    || ||||||| ||||||||||| || | |||||||||  ||||||||||    
T  35567632 ttatggttgtgtcaaaagttgttat-ttaatagatgtcaaaataacaca 35567679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 333 - 379
Target Start/End: Complemental strand, 32510872 - 32510826
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    |||||||||||||||||| || |||||||||||||||| ||||||||    
T  32510872 aatttttgtgacaattttctcacttatactcacattatctttttact 32510826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 333 - 379
Target Start/End: Original strand, 40829446 - 40829492
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    |||||||||||||||||| ||||| ||||||||||||| ||||||||    
T  40829446 aatttttgtgacaattttttctctcatactcacattatatttttact 40829492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 4719680 - 4719834
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttac----tctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||||||||||  || ||||| |||||||||||||||||||||    ||||| ||||| |||  ||||| || |||||| |  ||||||||| ||    
T  4719680 acaacttttgtgacaaccttttctctcatactcacattatgtttttactttttctctctattgctttgatttttgtgccaatactttcttttctttgcaa 4719779  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||| |||   |||||||||||  | | | | ||||||||||||| |||||    
T  4719780 aattttggatgtactaaaagttgtcacataattggttgttcaaataacataactc 4719834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 438
Target Start/End: Complemental strand, 5721859 - 5721746
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctca--ttttctttgt 424  Q
    |||||||||||||||| ||| ||||| ||||| ||||||| ||||||    |||||  ||||| ||| ||||||||| || | |||||  |||| |||||    
T  5721859 acaatttttgtgacaactttatctctcatactgacattatctttttactttctctccctattgctttggtttttatgccactgcctcattttttttttgt 5721760  T
Q  425 aaaattttggttgt 438  Q
    ||||||||||||||    
T  5721759 aaaattttggttgt 5721746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 347 - 481
Target Start/End: Complemental strand, 21943721 - 21943584
Alignment:
Q  347 ttttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctca 442  Q
    |||| ||||| ||| ||||||||||||||||    |||||| ||||| |||  ||||| |||||||| || ||||||||||| ||||| ||||||||       
T  21943721 ttttctctctcatattcacattatgtttttattttctctctttattgctttgatttttctgtcaatatcttattttctttgt-aaattatggttgtcatg 21943623  T
Q  443 aaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
     ||||||||||   ||||| |||| ||||||||||||||    
T  21943622 taagttgtcattaaaatagttgtttaaataacacaactc 21943584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 452
Target Start/End: Original strand, 2429074 - 2429161
Alignment:
Q  365 cattatgtttttactctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtca 452  Q
    |||||| |||||| | ||| |||| |||| | |||| ||||||||  || |||||||||||||||| |  ||||||||||||||||||    
T  2429074 cattatatttttattttctctattattttggattttgtgtcaatatatctttttctttgtaaaattataattgtctcaaaagttgtca 2429161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 333 - 473
Target Start/End: Original strand, 33598994 - 33599137
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttac----tctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    ||||||||||| || ||| | ||| |||||||||||||||||||||    ||||| ||||| ||||  |||| |||||||| ||| |||||||||||||     
T  33598994 aatttttgtgataactttctttctcatactcacattatgtttttactttttctctctattgcttta-attttgtgtcaatatctctttttctttgtaaat 33599092  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataa 473  Q
    || | ||||||  |||| || |||| | ||| | |||||||||||    
T  33599093 ttatagttgtcataaaaattatcatataaatggttgttcaaataa 33599137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 333 - 379
Target Start/End: Original strand, 3935261 - 3935306
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    |||||||||||||||||| ||||| | ||||||||||||||||||||    
T  3935261 aatttttgtgacaattttctctctca-actcacattatgtttttact 3935306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 300 - 379
Target Start/End: Original strand, 11148510 - 11148589
Alignment:
Q  300 agagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    |||||||||||||||  |||||||       |||| |||||||||||  || ||||| ||||||||||||||||||||||    
T  11148510 agagaaatgatatttgtacaatcaatttttgacaacttttgtgacaacattctctctcatactcacattatgtttttact 11148589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 333 - 379
Target Start/End: Original strand, 14532536 - 14532582
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    |||||||||||||| ||| ||||| ||||||||||| ||||||||||    
T  14532536 aatttttgtgacaactttctctctcatactcacattttgtttttact 14532582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 300 - 375
Target Start/End: Complemental strand, 19840058 - 19839983
Alignment:
Q  300 agagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttt 375  Q
    ||||||||||||||| |||| |||       |||||||||||||||| ||| ||||| ||||||||||||| ||||    
T  19840058 agagaaatgatatttgaacattcattttatgacaatttttgtgacaactttctctctcatactcacattatttttt 19839983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 301 - 481
Target Start/End: Original strand, 21155987 - 21156171
Alignment:
Q  301 gagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttactctctat----attgttttagt 396  Q
    |||||||||||||| ||||| ||       |||| ||||||||||  ||| ||| | ||||||||||||| |||| ||| ||| |    |||| ||| ||    
T  21155987 gagaaatgatatttgaacaaccattttttgacaacttttgtgacacctttctctttcatactcacattatattttcactttctctttctattgctttggt 21156086  T
Q  397 ttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||| || ||||  || |||||||||||||||||||| ||||  |||  ||| |||| | ||  |||||||||||||||||||||    
T  21156087 ttttgtgccaatcacttattttctttgtaaaattttgtttgttgcaagggttatcatataaaatgatgttcaaataacacaactc 21156171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 429
Target Start/End: Complemental strand, 9168206 - 9168106
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta--ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||| ||||||||||||||| ||| | ||||||||||||| ||||||   ||||| ||||| ||| |||||| || ||| || |  ||||||||||||||    
T  9168206 acaacttttgtgacaattttctctttcatactcacattatatttttattttctctctattgctttggtttttgtgccaacacatacttttctttgtaaaa 9168107  T
Q  429 t 429  Q
    |    
T  9168106 t 9168106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 411 - 452
Target Start/End: Original strand, 13168635 - 13168676
Alignment:
Q  411 ctcattttctttgtaaaattttggttgtctcaaaagttgtca 452  Q
    ||||||| ||||||||||||||| ||||| ||||||||||||    
T  13168635 ctcatttcctttgtaaaattttgattgtcacaaaagttgtca 13168676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 383
Target Start/End: Original strand, 35778828 - 35778869
Alignment:
Q  342 gacaattttgtctcttatactcacattatgtttttactctct 383  Q
    ||||||||| ||||||||||||||| ||| ||||||||||||    
T  35778828 gacaattttatctcttatactcacactatatttttactctct 35778869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 334 - 383
Target Start/End: Original strand, 35972606 - 35972655
Alignment:
Q  334 atttttgtgacaattttgtctcttatactcacattatgtttttactctct 383  Q
    |||||| |||||||||| |||||||||||||||| ||||| ||| |||||    
T  35972606 atttttttgacaattttctctcttatactcacatgatgttattattctct 35972655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 296 - 378
Target Start/End: Complemental strand, 38293435 - 38293353
Alignment:
Q  296 aaatagagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttac 378  Q
    |||| ||||||||||||||| |||| ||       |||||||||||||||| ||| ||| | ||||||||||||| |||||||    
T  38293435 aaattgagaaatgatatttttacaaccattttataacaatttttgtgacaactttctctatcatactcacattatatttttac 38293353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 9e-29; HSPs: 79)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 395 - 480
Target Start/End: Complemental strand, 41056721 - 41056636
Alignment:
Q  395 gtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaact 480  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||    
T  41056721 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 41056636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 298 - 480
Target Start/End: Original strand, 9207587 - 9207772
Alignment:
Q  298 atagagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgtttt 393  Q
    ||||||||||||||||| ||||||||       |||| ||||||||||| ||| ||||| ||||||||||||| ||||||||    |||| ||||| |||    
T  9207587 atagagaaatgatatttgaacaatcatttttt-acaacttttgtgacaactttctctctcatactcacattatttttttactttctctctctattgcttt 9207685  T
Q  394 agtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaact 480  Q
     |||||| || || |||||||||| ||||||||||||||||||||| ||||| || |||  |  |||||||||||||||||||||||    
T  9207686 ggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaaattatcacatatatagatgttcaaataacacaact 9207772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 395 - 481
Target Start/End: Complemental strand, 13333144 - 13333058
Alignment:
Q  395 gtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  13333144 gtttttgtgtcaatacatcattttctttataaaattttggttgtctcaaaagttgtcatataaatcgatgttcaaataacacaactc 13333058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 395 - 481
Target Start/End: Complemental strand, 25270556 - 25270470
Alignment:
Q  395 gtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||| | ||| |||||||||||||||||||||    
T  25270556 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcgaaagttgtcatataaatggatgttcaaataacacaactc 25270470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 335 - 481
Target Start/End: Original strand, 9760051 - 9760201
Alignment:
Q  335 tttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaatt 430  Q
    |||||||||||| ||| ||||| ||||||||||||| ||||||||    |||| ||||| ||||| |||| || || |||||||||| ||| | ||||||    
T  9760051 tttttgtgacaactttctctctcatactcacattatctttttactttctctctctattgctttagattttgtgccactacctcatttccttggaaaaatt 9760150  T
Q  431 ttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||| ||||||||||||  |  ||||||||||||||||||||||||    
T  9760151 ttggttgtcacaaaagttgtcacatatatagatgttcaaataacacaactc 9760201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 18254251 - 18254097
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||| ||||||||||||| ||||||||    |||| ||||| ||| |||||| || || || ||||||| ||||||||    
T  18254251 acaacttttgtgacaactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgccactatctcatttcctttgtaa 18254152  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||| ||||||||||||  |  || |||||||||||||||||||||    
T  18254151 aattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 18254097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 27490772 - 27490618
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||| | ||||| ||||||||||||    |||||| ||||| |||  ||||| ||| ||||| |||||||||||||||    
T  27490772 acaacttttgtgacaactttctctctcacactcatattatgtttttaatttctctctctattgctttgatttttgtgttaatacatcattttctttgtaa 27490673  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||| ||||| |||||||||||||   ||| |||||||||||||||||||||    
T  27490672 aattttgattgtcacaaaagttgtcatcaaaatggatgttcaaataacacaactc 27490618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 41195613 - 41195767
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||||||| ||||| ||||||||||||  ||||||||    |||| ||||| ||| |||||| |||||||| ||||||| ||||||||    
T  41195613 acaacttttgtgacaattttctctctcatactcacattacctttttactttctctctctattgctttggtttttgtgtcaatatctcatttcctttgtaa 41195712  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||| |||||||||| |  |  ||  ||||||||||||||||||||    
T  41195713 aattttggttgtcacaaaagttgttacatatatgaatgttcaaataacacaactc 41195767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 395 - 481
Target Start/End: Complemental strand, 3097835 - 3097749
Alignment:
Q  395 gtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||| ||| |||| |||||||||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  3097835 gtttttgtgtaaataactcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 3097749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 396 - 481
Target Start/End: Original strand, 2076667 - 2076752
Alignment:
Q  396 tttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||  |  || |||||||||||||||||||||    
T  2076667 tttttgtgtcaatacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatctattgatgttcaaataacacaactc 2076752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 8848737 - 8848585
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||| ||||||||||| ||| ||||| | |||||||| |||||||||||  |||| ||||| |||  ||||| |  |||||| |||||||||||| ||||    
T  8848737 acaacttttgtgacaactttctctctcacactcacatcatgtttttactttctctctattgctttgatttttgtaccaatacatcattttctttgcaaaa 8848638  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||| ||||| ||||| || |||| | |||||||||||||||||||||||||    
T  8848637 ttttgattgtcacaaaaattatcatctaaatagatgttcaaataacacaactc 8848585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 331 - 477
Target Start/End: Original strand, 19642627 - 19642777
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| | |||||||||||||||||||||| |||    |||| ||||| |||  ||||| ||||||| | |||||||||||| ||    
T  19642627 acaacttttgtgacaaatttttatcttatactcacattatgttttcactttctctctctattgctttgatttttgtgtcaatgcttcattttctttgcaa 19642726  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    |||| ||||||||||||||||| |||| | ||| |||||| ||||||||||    
T  19642727 aattgtggttgtctcaaaagttctcatataaatggatgtttaaataacaca 19642777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 22888863 - 22888705
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact--------ctctatattgttttagtttttatgtcaatacctcattttcttt 422  Q
    |||||||||||||||| ||| ||||| ||||||||||||  ||||||||        |||| ||||| ||| |||||| || ||||||||||||| ||||    
T  22888863 acaatttttgtgacaactttctctctcatactcacattacctttttactttcactctctctttattgctttggtttttgtgccaatacctcatttccttt 22888764  T
Q  423 gtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||| ||||| ||||||||||||  |  || |||||||||||||||||||||    
T  22888763 gtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 22888705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 336 - 486
Target Start/End: Original strand, 32477366 - 32477520
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattt 431  Q
    ||||||||||||||| | || |||||||||||||| ||||||||    |||||||||| |||  ||||| | | |||||||||||| |||||| ||||||    
T  32477366 ttttgtgacaattttctttcatatactcacattatctttttactttctctctatattgctttgatttttgtatgaatacctcatttcctttgtcaaattt 32477465  T
Q  432 tggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactcgttta 486  Q
    |||||||| ||||||||||||  |  ||  |||||||||||||||||||| ||||    
T  32477466 tggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactctttta 32477520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 41042283 - 41042437
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||| ||||||||||||| ||||||||    |||| ||||| ||| ||||||||||||||| ||||||| |||| |||    
T  41042283 acaacttttgtgacaactttttctctcatactcacattatctttttactttctctctctattgctttggtttttatgtcaatatctcatttcctttataa 41042382  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||||||||  |||| ||||||  |  || ||||||||||||||| |||||    
T  41042383 aattttggttgtcataaaaattgtcacatatatggatgttcaaataacagaactc 41042437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 333 - 481
Target Start/End: Original strand, 43487410 - 43487562
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttactctctat----attgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||||||||||||| ||| ||||| || |||||||||| |||||||| ||| |    |||| ||| |||||| ||||| |||||||||| ||||||||||    
T  43487410 aatttttgtgacaactttctctctcatgctcacattatttttttactttctttctctattgctttggtttttgtgtcactacctcatttcctttgtaaaa 43487509  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||  ||||| ||||||  |  || |||||||||||||||||||||    
T  43487510 ttttggttgttacaaaaattgtcacatatatggatgttcaaataacacaactc 43487562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 9194270 - 9194424
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||||||||||||||  ||| ||||| ||||||||||||| ||||||||    |||| ||||||||| |||||| || || ||||||||||  |||||||    
T  9194270 acaatttttgtgacatctttctctctcatactcacattatctttttactttctctctctattgttttggtttttgtgccattacctcatttcttttgtaa 9194369  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||| ||||| |||| |  |  ||  ||||||||||||||||||||    
T  9194370 aattttggttgtcacaaaaattgttacatatatgaatgttcaaataacacaactc 9194424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 42421940 - 42421786
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||||||||||||||||| || ||||||||||| | ||||||||    |||| ||||| ||| || ||| || || |||||||||| |||| |||    
T  42421940 acaacttttgtgacaattttgtcactcatactcacattttctttttactttctctctttattgctttggtgtttgtgccactacctcatttcctttctaa 42421841  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||| ||||||||||||  |  ||  ||||||||||||||||||||    
T  42421840 aattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 42421786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 44977541 - 44977387
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||||| |||||||| ||||| ||| | ||||||||||||||||    |||| ||||| ||| |||||| |||||||||| ||||||||||||||    
T  44977541 acaacttttgtaacaattttctctctcatatttacattatgtttttactttctctctctattgctttggtttttgtgtcaataccccattttctttgtaa 44977442  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    | || ||||||||||| ||||| || |   ||| | |||||||||||||||||||    
T  44977441 atttatggttgtctcataagttttcgttcaaatggttgttcaaataacacaactc 44977387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 334 - 478
Target Start/End: Complemental strand, 6049383 - 6049236
Alignment:
Q  334 atttttgtgacaattttgtctcttatactcacattatgt-ttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaatt 430  Q
    |||||||||| || ||| ||||| ||||||||||||| | |||||||  |||| | ||| ||| |||||| || ||||||||||||| ||||||||||||    
T  6049383 atttttgtgataactttctctctcatactcacattatttattttactttctctctcttgctttggtttttgtgccaatacctcatttcctttgtaaaatt 6049284  T
Q  431 ttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaa 478  Q
    ||| ||||| ||||||||||||  |  || ||||||||||||||||||    
T  6049283 ttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaa 6049236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 333 - 438
Target Start/End: Complemental strand, 33273625 - 33273518
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaatt 430  Q
    ||||||||| |||||||| ||||||||| | |||||||||||| | |  |||| |||| ||||||||||| |||||||| |||||||||||| |||||||    
T  33273625 aatttttgtaacaattttctctcttatatttacattatgttttcattatctctttattattttagtttttgtgtcaatatctcattttctttataaaatt 33273526  T
Q  431 ttggttgt 438  Q
    ||||||||    
T  33273525 ttggttgt 33273518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 341 - 478
Target Start/End: Complemental strand, 42091536 - 42091393
Alignment:
Q  341 tgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggtt 436  Q
    |||||| ||| ||||||||||||||||||| | ||||||    |||| ||||| ||| |||||| ||||| |||||| ||| ||||||||||||||||||    
T  42091536 tgacaactttctctcttatactcacattatctctttacttttcctctctattgctttggtttttgtgtcactacctcgtttcctttgtaaaattttggtt 42091437  T
Q  437 gtctcaaaagttgtca--tgtgaatagatgttcaaataacacaa 478  Q
    ||| ||||| ||||||  | |  |||||||||||||||||||||    
T  42091436 gtcacaaaaattgtcacatatatatagatgttcaaataacacaa 42091393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 3838922 - 3838768
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||||||| |||||| | ||||||| ||||||||| ||||||||    |||| |||||||||  ||||| ||||| | | |||||| ||||||||    
T  3838922 acaacttttgtgataattttttttcttatattcacattatctttttactttctctctctattgttttgatttttgtgtcactgcttcatttcctttgtaa 3838823  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||  || || ||||||||||||  |  ||||||||||||||||||||||||    
T  3838822 aattttaattatcacaaaagttgtcacatatatagatgttcaaataacacaactc 3838768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 9990720 - 9990874
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||||||||||||||||||| ||||||    |||||| ||||| ||| |||||| |  || ||| |||||| ||||||||    
T  9990720 acaacttttgtgacaactttctctcttatactcacattatctttttactttctctctctattgctttggtttttgtaccactacttcatttcctttgtaa 9990819  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||  ||||| |||||||| |||  |  || |||||||||||||||||||||    
T  9990820 aattttaattgtcacaaaagttatcacatatatggatgttcaaataacacaactc 9990874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 335 - 453
Target Start/End: Complemental strand, 29879693 - 29879571
Alignment:
Q  335 tttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaatt 430  Q
    |||||||||||||||| ||| ||||||| || |||||||||||||    |||| |||| ||||||||||||||| |||| | ||||||||||||||||||    
T  29879693 tttttgtgacaattttctcttttatacttacgttatgtttttactttttctctttattattttagtttttatgtaaatatcacattttctttgtaaaatt 29879594  T
Q  431 ttggttgtctcaaaagttgtcat 453  Q
     |  ||||| || ||||||||||    
T  29879593 ataattgtcccataagttgtcat 29879571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 23690551 - 23690396
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta-----ctctctatattgttttagtttttatgtcaatacctcattttctttgta 425  Q
    |||| |||| |||||| ||| ||||| |||||||||||||||||||      ||| || ||||||||| |||||| |||||||||||| ||| |||||||    
T  23690551 acaacttttatgacaactttctctctcatactcacattatgttttttactttctcactctattgttttggtttttgtgtcaatacctcttttcctttgta 23690452  T
Q  426 aaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||| | ||||||||| ||||||||||     ||| | |||||||||||||||||||    
T  23690451 aaaatatggttgtcttaaaagttgtctatcaaattggtgttcaaataacacaactc 23690396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 360 - 480
Target Start/End: Original strand, 28494918 - 28495042
Alignment:
Q  360 actcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgt 455  Q
    ||||| ||||||||||||    ||||||| ||| |||| |||||| ||||||||||| ||||||| |||||| || |||||||| |||||||||| || |    
T  28494918 actcatattatgtttttattttctctctaaattattttggtttttgtgtcaatacctaattttctgtgtaaatttatggttgtcacaaaagttgtaattt 28495017  T
Q  456 gaatagatgttcaaataacacaact 480  Q
     ||| | ||||||||||||||||||    
T  28495018 aaatggttgttcaaataacacaact 28495042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 331 - 477
Target Start/End: Original strand, 39147795 - 39147945
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttactctctat----attgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||||| |||| ||| ||| | ||| |||||||||||||||||| ||| |    ||||||||  ||||| ||||||||||||||||| |||||||    
T  39147795 acaacttttgtaacaactttctctttcatattcacattatgtttttactttctctttgtattgttttgatttttgtgtcaatacctcattttttttgtaa 39147894  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    | || || ||||| |||||||||||||   ||| | |||||||||||||||    
T  39147895 atttatgattgtcccaaaagttgtcattaaaatggttgttcaaataacaca 39147945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 300 - 481
Target Start/End: Original strand, 1352387 - 1352572
Alignment:
Q  300 agagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttactct----ctatattgttttag 395  Q
    ||||||||||||||| ||||||||       |||| |||| ||| || ||| ||| | ||||||||||||| |||||||| |    || ||||| ||| |    
T  1352387 agagaaatgatatttgaacaatcaatttttgacaacttttatgaaaactttctctttcatactcacattatatttttactttatttctctattgctttgg 1352486  T
Q  396 tttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||| || ||||  |||||||||||||||||||||| |||||  |||| ||||| || | ||  |||||||||||||||||||||    
T  1352487 tttttgtgccaatcactcattttctttgtaaaattttagttgttgcaaaggttgttatataaaatgatgttcaaataacacaactc 1352572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 333 - 481
Target Start/End: Complemental strand, 1907803 - 1907651
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||||||||||||| ||| ||||| ||| | | ||||||||||||||    |||| |||||||||  ||||| ||||||| || | |||||||||||||     
T  1907803 aatttttgtgacaactttatctctcatatttatattatgtttttactttctctctctattgttttgatttttgtgtcaattccgctttttctttgtaaat 1907704  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    || ||||||||  | |||||||||| | |||   |||||||||||||||||||    
T  1907703 ttatggttgtcatacaagttgtcatctaaatgattgttcaaataacacaactc 1907651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 343 - 491
Target Start/End: Original strand, 9647173 - 9647325
Alignment:
Q  343 acaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgt 438  Q
    |||| ||| ||||| ||||||| ||||| ||||||||    |||| ||||| ||| |||||| ||||| ||| |||||| ||||||||||||||||||||    
T  9647173 acaactttctctctcatactcatattatctttttactttctctctctattgctttggtttttgtgtcactacttcatttcctttgtaaaattttggttgt 9647272  T
Q  439 ctcaaaagttgtcatgtgaatagatgttcaaataacacaactcgtttaaatat 491  Q
    | |||||||| ||   |  ||  |||||||||||||||||||| || ||||||    
T  9647273 cacaaaagttatcgcatatatgaatgttcaaataacacaactctttaaaatat 9647325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 37737962 - 37737859
Alignment:
Q  378 ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    |||||| ||||| |||  ||||| |||||||| ||||||| ||||||||| ||||||||||| ||||||||||||  |  || || ||||||||||||||    
T  37737962 ctctctctattgctttgatttttgtgtcaatatctcatttcctttgtaaagttttggttgtcacaaaagttgtcacatatatggacgttcaaataacaca 37737863  T
Q  478 actc 481  Q
    ||||    
T  37737862 actc 37737859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 331 - 439
Target Start/End: Complemental strand, 44287482 - 44287372
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttt--ttactctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||| |||||||| |||||| ||||| ||||||||||||| |||  || |||||| ||||||||| ||| || || ||  ||||||||| ||||||||||    
T  44287482 acaacttttgtgataattttttctctcatactcacattatatttactttctctctctattgttttggttattgtgccacaacctcatttcctttgtaaaa 44287383  T
Q  429 ttttggttgtc 439  Q
    |||||||||||    
T  44287382 ttttggttgtc 44287372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 341 - 427
Target Start/End: Complemental strand, 33583254 - 33583164
Alignment:
Q  341 tgacaattttgtctcttatactcacat--tatgtttttact--ctctatattgttttagtttttatgtcaatacctcattttctttgtaaa 427  Q
    |||||||||| ||| | ||||||||||  ||||||||||||  |||| |||||||||  ||||| ||||||||||||||||||||||||||    
T  33583254 tgacaattttctctttcatactcacatattatgtttttactttctctctattgttttgttttttttgtcaatacctcattttctttgtaaa 33583164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 331 - 452
Target Start/End: Original strand, 42430679 - 42430804
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||| ||||||  || ||||| ||||||||||||||||||||||    |||| ||||||||| ||||   |||||||||||  ||||||||||||    
T  42430679 acaacttttatgacaacattttctctcatactcacattatgtttttacttcctctctctattgttttggtttccgtgtcaatacctacttttctttgtaa 42430778  T
Q  427 aattttggttgtctcaaaagttgtca 452  Q
    | || |||||||  ||||||||||||    
T  42430779 acttatggttgttccaaaagttgtca 42430804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 356 - 481
Target Start/End: Original strand, 44654680 - 44654807
Alignment:
Q  356 ttatactcacattatgtt--tttactctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcat 453  Q
    ||||| ||||||||||||  ||| |||||| |||||||||  ||||| |||| ||  |||||||||||| ||||||||| ||||||| ||||||| ||||    
T  44654680 ttatattcacattatgttaatttcctctctctattgttttgatttttgtgtcgatttctcattttctttataaaattttagttgtcttaaaagttatcat 44654779  T
Q  454 gtgaatagatgttcaaataacacaactc 481  Q
     | |||   | |||||||||||||||||    
T  44654780 ataaattatttttcaaataacacaactc 44654807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 296 - 481
Target Start/End: Complemental strand, 7258638 - 7258449
Alignment:
Q  296 aaatagagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgtt 391  Q
    |||||||||||||| ||||  |||||||       |||| |||||| |||||||| ||||| ||||| |||| |||| ||||||    |||| ||||| |    
T  7258638 aaatagagaaatgacatttgtacaatcactctttgacaacttttgtaacaattttctctctcatacttacatcatgtctttactttctctctctattgct 7258539  T
Q  392 ttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||  |||||||||||| ||||| |||||||| ||||||| | |||||| ||||| |||| |    ||| | |||||||||||||||||||    
T  7258538 ttgatttttatgtcaagacctctttttctttataaaattatagttgtcccaaaaattgttaatcaaatggttgttcaaataacacaactc 7258449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 336 - 480
Target Start/End: Original strand, 29349540 - 29349688
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttac----tctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattt 431  Q
    ||||||||||| ||| ||||| | | |||||||||||||||||    ||||| | ||  |||  ||||| || | |||| | ||||||||||||||||||    
T  29349540 ttttgtgacaactttctctctcacattcacattatgtttttaccttttctctctgttactttgatttttgtgccgatacattattttctttgtaaaattt 29349639  T
Q  432 tggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaact 480  Q
    || ||||| ||||||||||||| | ||| |||||| |||||||| ||||    
T  29349640 tgattgtcacaaaagttgtcatctaaatggatgttgaaataacataact 29349688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 426 - 481
Target Start/End: Original strand, 42434247 - 42434302
Alignment:
Q  426 aaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||| | ||||||||||||||||| | |||||||||||||||||||||||||    
T  42434247 aaattttgatcgtctcaaaagttgtcatataaatagatgttcaaataacacaactc 42434302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 331 - 451
Target Start/End: Original strand, 44050045 - 44050168
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttactctctat----attgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| |||||||||||  || ||||| |||||||||||||||||||||| ||| |    |||| ||| ||||   ||||||||| | |||||||||||||    
T  44050045 acaacttttgtgacaaccttctctctcatactcacattatgtttttactttctttctttattgctttggtttccgtgtcaatacat-attttctttgtaa 44050143  T
Q  427 aattttggttgtctcaaaagttgtc 451  Q
    | || ||||||||||||||||||||    
T  44050144 atttatggttgtctcaaaagttgtc 44050168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 379 - 481
Target Start/End: Original strand, 1248767 - 1248869
Alignment:
Q  379 tctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaa 478  Q
    ||||| ||||| ||| |||||| || || |||||||||| ||||||||||||||  || || ||||||||||||  |  || ||||||||||||||||||    
T  1248767 tctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttaattatcacaaaagttgtcacatatatggatgttcaaataacacaa 1248866  T
Q  479 ctc 481  Q
    |||    
T  1248867 ctc 1248869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 331 - 481
Target Start/End: Complemental strand, 5054212 - 5054060
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||| | |||||||  ||||||||||| |    |||| ||||||||| | ||||||||| |||| |  |||| ||| |||    
T  5054212 acaacttttgtgacaactttctctttcatactcatgttatgtttttatttttcctctctattgttttggcttttatgtcgatactt--ttttttttataa 5054115  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    | || |||||||||||||||||||||| | ||||| | || ||||||||||||||    
T  5054114 atttatggttgtctcaaaagttgtcatataaatagttttttaaataacacaactc 5054060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 333 - 452
Target Start/End: Complemental strand, 34945130 - 34945007
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    ||||||| |||||| ||| ||||| |||||||||| || ||||||||    |||| ||||| |||  ||||| || || ||||||||||  |||||||||    
T  34945130 aatttttatgacaactttctctctcatactcacatgatctttttactttctctctctattgctttgatttttgtgccactacctcatttcttttgtaaaa 34945031  T
Q  429 ttttggttgtctcaaaagttgtca 452  Q
    ||||||||||| | ||||||||||    
T  34945030 ttttggttgtcacgaaagttgtca 34945007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 331 - 477
Target Start/End: Original strand, 14255332 - 14255482
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||||||| ||||  |||||||||| ||| |||||||    |||| |||||  || |||| | ||| |||||||  ||||||||||||    
T  14255332 acaacttttgtgacaattttctctcacatactcacatcatggttttactttctctctctattgcattggtttatgtgttaatacctacttttctttgtaa 14255431  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    | || |||||||| |||||||||||   | ||| | |||||||||||||||    
T  14255432 atttatggttgtcccaaaagttgtcgcataaatggttgttcaaataacaca 14255482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 336 - 424
Target Start/End: Complemental strand, 17569740 - 17569651
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgttt-ttactctctatattgttttagtttttatgtcaatacctcattttctttgt 424  Q
    |||||| ||||| || ||||| ||||||||||||||||  || |||||| |||||||||  ||||| |||||||||||||||||| ||||    
T  17569740 ttttgtaacaatattttctctcatactcacattatgttactttctctctttattgttttgctttttgtgtcaatacctcattttccttgt 17569651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 333 - 478
Target Start/End: Complemental strand, 5427262 - 5427113
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttac----tctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||||||||||||| ||  ||||||||| |||||||||||||||||    ||||| |||||| || |||||| |||||||| ||| ||||| || ||||     
T  5427262 aatttttgtgacaacttcctctcttatattcacattatgtttttactttttctctctattgtgttggtttttttgtcaatatctctttttccttataaat 5427163  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaa 478  Q
    || |||| |||  ||||| |||||| | ||| | ||||  ||||||||||    
T  5427162 ttatggtagtcgtaaaaggtgtcatctaaatggttgtttgaataacacaa 5427113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 14499065 - 14499021
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttt 375  Q
    |||||||||||||||||||| |||| |||||||||||||||||||    
T  14499065 acaatttttgtgacaattttctctcatatactcacattatgtttt 14499021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 336 - 481
Target Start/End: Original strand, 18846645 - 18846794
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattt 431  Q
    |||||||| |||||| ||||| | |||||| |||||||||||||    |||| ||||  |||  ||||| |  |||||| ||||||| |||| |||||||    
T  18846645 ttttgtgataattttctctctcacactcactttatgtttttactttctctctctattactttgatttttgtaccaatacatcattttttttgcaaaattt 18846744  T
Q  432 tggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    || |||||  |||| ||||||| | ||| ||||||||||||||| |||||    
T  18846745 tgattgtcataaaaattgtcatctaaatggatgttcaaataacataactc 18846794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 331 - 439
Target Start/End: Original strand, 6511280 - 6511392
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||| ||||||| ||| ||||| ||||||||||||| ||||||    |||| | ||||| ||| |||||| ||||| |||||||||| |||| |||    
T  6511280 acaactttagtgacaactttctctctcatactcacattatctttttattttctctttctattgctttggtttttgtgtcactacctcatttcctttataa 6511379  T
Q  427 aattttggttgtc 439  Q
    ||||||| |||||    
T  6511380 aattttgattgtc 6511392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 378 - 481
Target Start/End: Complemental strand, 7664057 - 7663955
Alignment:
Q  378 ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    |||||| ||||| ||| |||||| |||||||||||| ||||||||||||| || ||||||||  |||| ||||||  | |||   |||||||||||||||    
T  7664057 ctctctctattgctttggtttttgtgtcaatacctctttttctttgtaaatttatggttgtcataaaa-ttgtcacctaaatgattgttcaaataacaca 7663959  T
Q  478 actc 481  Q
    ||||    
T  7663958 actc 7663955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 300 - 452
Target Start/End: Original strand, 38821365 - 38821518
Alignment:
Q  300 agagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttac--tctctatattgttttagtt 397  Q
    ||||||||||||||| ||||| ||       |||| ||||||||||||||| | ||| ||||||||||| |||||||||  ||||| ||||| ||| ||     
T  38821365 agagaaatgatatttgaacaaccattttatgacaacttttgtgacaattttctttctcatactcacattgtgtttttaccttctctctattgctttggta 38821464  T
Q  398 tttatgtcaatacctcat-tttctttgtaaaattttggttgtctcaaaagttgtca 452  Q
    ||| || ||||| ||||| ||||||||| | |||| ||||||| ||||||||||||    
T  38821465 tttgtgccaata-ctcatatttctttgt-atatttaggttgtcccaaaagttgtca 38821518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 333 - 379
Target Start/End: Original strand, 4657333 - 4657379
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||||||    
T  4657333 aatttttgtgacaattttttctcttatattcacattatatttttact 4657379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 411 - 481
Target Start/End: Complemental strand, 16973719 - 16973649
Alignment:
Q  411 ctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||| ||||||||||||||||||| |||| |||||||   | |||||||||| |||||||| |||||    
T  16973719 ctcattttatttgtaaaattttggttgtatcaatagttgtccaataaatagatgtttaaataacaaaactc 16973649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 336 - 439
Target Start/End: Original strand, 22416247 - 22416354
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattt 431  Q
    |||||||| || ||| ||||  ||||| ||||||| ||||||||    |||| ||||| ||| |||||| || || | ||||||||||||||||||||||    
T  22416247 ttttgtgataactttctctcccatacttacattatctttttactttctctctctattgctttggtttttgtgccactgcctcattttctttgtaaaattt 22416346  T
Q  432 tggttgtc 439  Q
    ||||||||    
T  22416347 tggttgtc 22416354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 481
Target Start/End: Complemental strand, 21611604 - 21611543
Alignment:
Q  420 tttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||||||||||  |||||||||||  |  || |||||||||||||||||||||    
T  21611604 tttgtaaaattttggttgtcataaaagttgtcacatatatggatgttcaaataacacaactc 21611543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 14500933 - 14500889
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttt 375  Q
    |||||||||||||||||||| |||| |||| ||||||||||||||    
T  14500933 acaatttttgtgacaattttttctcatataatcacattatgtttt 14500889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 332 - 409
Target Start/End: Original strand, 16740168 - 16740249
Alignment:
Q  332 caatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaata 409  Q
    |||||||||||| || ||| ||| ||||||||||||||||||||||||    |||| |||| |||| ||||| |||||||||    
T  16740168 caatttttgtgagaactttatctattatactcacattatgtttttactttccctctctattattttggttttcatgtcaata 16740249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 395 - 486
Target Start/End: Original strand, 19633379 - 19633471
Alignment:
Q  395 gtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtc-atgtgaatagatgttcaaataacacaactcgttta 486  Q
    |||||| | ||| |||||||||| ||||||||||||||| ||||| |||||||| || |  |  ||| |||||||||||| ||||||||||||    
T  19633379 gtttttgtatcactacctcatttcctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaataatacaactcgttta 19633471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 395 - 486
Target Start/End: Original strand, 19830280 - 19830372
Alignment:
Q  395 gtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtc-atgtgaatagatgttcaaataacacaactcgttta 486  Q
    |||||| | ||| |||||||||| ||||||||||||||| ||||| |||||||| || |  |  ||| |||||||||||| ||||||||||||    
T  19830280 gtttttgtatcactacctcatttcctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaataatacaactcgttta 19830372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 385 - 481
Target Start/End: Original strand, 32628270 - 32628366
Alignment:
Q  385 tattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||||||||||| | | ||| ||||||||| ||| |||| || | ||||||||||||||| ||||   ||| | ||||||||||||| |||||    
T  32628270 tattgttttagtttttgtattaatgcctcattttttttataaatttatagttgtctcaaaagttatcattaaaatggttgttcaaataacaaaactc 32628366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 336 - 480
Target Start/End: Original strand, 34215299 - 34215445
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattt 431  Q
    |||| |||||||||| ||||| ||| ||||||||||||||||||    || | ||||| | |||||||| ||||||||| ||||| ||||| |||| |      
T  34215299 ttttttgacaattttctctctcatattcacattatgtttttactttttctttctattgctatagtttttgtgtcaatacttcattgtctttataaa-taa 34215397  T
Q  432 tggttgtctcaaaagttgtcatgtgaatagat-gttcaaataacacaact 480  Q
    |||||||| |||||||| |||| ||||  ||| |||||||||||||||||    
T  34215398 tggttgtc-caaaagttatcat-tgaaatgattgttcaaataacacaact 34215445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 420 - 481
Target Start/End: Original strand, 136049 - 136107
Alignment:
Q  420 tttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||||| ||||||||||||   ||||| | ||| |||||||||||||||||||||    
T  136049 tttgtaaaattttagttgtctcaaaa---gtcatataaatggatgttcaaataacacaactc 136107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 333 - 481
Target Start/End: Original strand, 7698202 - 7698354
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttactctctat----attgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    ||||||||||| || ||| | | ||||| ||||||||| |||||||| ||| |    |||| |||  ||||| || || ||||| |||| ||||||||||    
T  7698202 aatttttgtgataactttcttttttatattcacattatttttttactttctctttctattgctttgatttttgtgccactacctaatttcctttgtaaaa 7698301  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||  || || |||||||| |||  || |||||||||| |||||||||||||    
T  7698302 ttttaattatcacaaaagttatcacatgtatagatgttctaataacacaactc 7698354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 439
Target Start/End: Complemental strand, 10060464 - 10060366
Alignment:
Q  343 acaattttgtctcttatactcacattatgtttttactctctatat--tgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtc 439  Q
    |||| ||| ||||| ||||||| ||||| |||||||||||| | |  || ||||||||||||  ||||| ||||||| |||| ||||||||| ||||||    
T  10060464 acaactttatctctcatactcatattatctttttactctctctctgttgctttagtttttatagcaatatctcatttcctttataaaattttagttgtc 10060366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 370
Target Start/End: Complemental strand, 34431868 - 34431829
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattat 370  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  34431868 acaatttttgtgacaactttctctcttatactcacattat 34431829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 379 - 481
Target Start/End: Original strand, 43075964 - 43076066
Alignment:
Q  379 tctctatattgttttagtttttatgtcaatacctca-ttttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    ||||| || ||||||  ||||| ||||||||| ||| |||| ||| |||||||||||||||||| |||||| |||| | ||| | | |||||||||||||    
T  43075964 tctctctactgttttgatttttgtgtcaatacttcaattttttttataaaattttggttgtctc-aaagttatcatataaattgttattcaaataacaca 43076062  T
Q  478 actc 481  Q
    ||||    
T  43076063 actc 43076066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 415 - 477
Target Start/End: Complemental strand, 3412508 - 3412446
Alignment:
Q  415 ttttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    ||||||||||||| || ||||||| |||||||||||||  | ||||| |||||||| ||||||    
T  3412508 ttttctttgtaaatttatggttgtttcaaaagttgtcacataaatagttgttcaaacaacaca 3412446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 396 - 446
Target Start/End: Complemental strand, 7502383 - 7502333
Alignment:
Q  396 tttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaag 446  Q
    ||||| |||||||||||| |||||||| ||||||| |||||||| ||||||    
T  7502383 tttttgtgtcaatacctctttttctttataaaattatggttgtcccaaaag 7502333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 379 - 481
Target Start/End: Complemental strand, 17768034 - 17767932
Alignment:
Q  379 tctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaa 478  Q
    ||||| |||| |||| |||||| ||||||| | |||||||||||  ||||  ||  ||||||||||||||||| |   |||  |||||||||||||||||    
T  17768034 tctctctattcttttggtttttgtgtcaatgcttcattttctttacaaaaaattaattgtctcaaaagttgtcgtaaaaatgaatgttcaaataacacaa 17767935  T
Q  479 ctc 481  Q
    |||    
T  17767934 ctc 17767932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 333 - 379
Target Start/End: Complemental strand, 21738655 - 21738609
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    ||||||||||| |||||| ||||| ||||||||||||| ||||||||    
T  21738655 aatttttgtgataattttctctctcatactcacattatatttttact 21738609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 341 - 438
Target Start/End: Original strand, 39430693 - 39430793
Alignment:
Q  341 tgacaattttgtctcttatactcacattatgtttttact---ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttg 437  Q
    |||||| ||| ||| ||||||||||||||  ||||||||   |||| ||||  |||||||||| |||||||   | |||||||||||||||||||| |||    
T  39430693 tgacaactttctcttttatactcacattacatttttacttctctctttattactttagtttttgtgtcaatcatttattttctttgtaaaattttgattg 39430792  T
Q  438 t 438  Q
    |    
T  39430793 t 39430793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 435 - 481
Target Start/End: Complemental strand, 42340689 - 42340643
Alignment:
Q  435 ttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||| |||||||||||| | | |||||||||||||||||||||||||    
T  42340689 ttgtttcaaaagttgtcctataaatagatgttcaaataacacaactc 42340643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 299 - 370
Target Start/End: Original strand, 43057062 - 43057133
Alignment:
Q  299 tagagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattat 370  Q
    |||||||||||||||| ||||| ||       |||| ||||||||||| ||| |||||||||||||||||||    
T  43057062 tagagaaatgatatttgaacaaccactttttaacaacttttgtgacaactttctctcttatactcacattat 43057133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 331 - 389
Target Start/End: Complemental strand, 45259326 - 45259268
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttactctctatattg 389  Q
    |||||||||||||||| ||| | ||| |||||||| |||| |||||||||||| |||||    
T  45259326 acaatttttgtgacaactttttatctcatactcacgttatatttttactctctctattg 45259268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 449
Target Start/End: Original strand, 8427582 - 8427704
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||||||||||||||| ||| ||||| ||||| |||||||  |||||    |||||| |||| |||| |||||  |||||||| || |||| |||| |||    
T  8427582 acaatttttgtgacaactttctctctcatacttacattatacttttactttctctctctattattttggttttcgtgtcaataactaatttcctttataa 8427681  T
Q  427 aattttggttgtctcaaaagttg 449  Q
    | || |||||||  |||||||||    
T  8427682 atttatggttgttccaaaagttg 8427704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 404 - 477
Target Start/End: Original strand, 9521914 - 9521987
Alignment:
Q  404 tcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacaca 477  Q
    |||||||||  ||||||||||||| || ||||||||||||||||| |||    |||| || |||||||||||||    
T  9521914 tcaatacctatttttctttgtaaatttatggttgtctcaaaagttatcacacaaataaatattcaaataacaca 9521987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 379
Target Start/End: Complemental strand, 10833717 - 10833639
Alignment:
Q  301 gagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    ||||||||||||||| |||| ||       ||||| | |||||||||||| ||||| ||||||||||||| ||||||||    
T  10833717 gagaaatgatattttgacaaccattttgtgacaatctatgtgacaattttatctctcatactcacattatttttttact 10833639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 395 - 448
Target Start/End: Original strand, 31415007 - 31415060
Alignment:
Q  395 gtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagtt 448  Q
    |||||| |||||||| |||  ||||||| ||||||| |||||||||||||||||    
T  31415007 gtttttgtgtcaatatctctctttctttttaaaattatggttgtctcaaaagtt 31415060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 396 - 453
Target Start/End: Complemental strand, 34852274 - 34852217
Alignment:
Q  396 tttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcat 453  Q
    |||||||| |||||| || |||| |||||||| |||| ||| ||||||||||||||||    
T  34852274 tttttatgccaatacatctttttatttgtaaattttttgttatctcaaaagttgtcat 34852217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 65; Significance: 4e-28; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 337 - 481
Target Start/End: Original strand, 11816 - 11965
Alignment:
Q  337 tttgtgacaattttgtctcttatactcacattatg-ttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattt 431  Q
    |||||||||| ||| ||||| ||||| |||||||  ||||||    |||||| ||||| ||| |||||| ||||||||||||||||||||||||||||||    
T  11816 tttgtgacaactttctctctcatacttacattattctttttattttctctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaattt 11915  T
Q  432 tggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||| ||| ||||||||||||| |  |||||||||||||||| |||||||    
T  11916 tggtcgtcacaaaagttgtcatatttatagatgttcaaataatacaactc 11965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 63; Significance: 6e-27; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 358 - 481
Target Start/End: Complemental strand, 53376 - 53249
Alignment:
Q  358 atactcacattatgttttta----ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtctcaaaagttgtcat 453  Q
    ||||||||||||||||||||    |||||| | |||||||||||||| |||||||| |||||||||||| |||| |||||||||||| |||| || ||||    
T  53376 atactcacattatgtttttattttctctctcttttgttttagtttttgtgtcaatatctcattttctttataaatttttggttgtctaaaaacttatcat 53277  T
Q  454 gtgaatagatgttcaaataacacaactc 481  Q
     | |||| ||||||||||||||||||||    
T  53276 ataaataaatgttcaaataacacaactc 53249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 56; Significance: 9e-23; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 333 - 481
Target Start/End: Complemental strand, 76659 - 76507
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    |||||||||||||| ||| ||||| |||| |||||||| |||| |||    |||| ||||| ||| |||||| || || |||||||||| ||||||||||    
T  76659 aatttttgtgacaactttctctctcatacccacattatcttttcactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaa 76560  T
Q  429 ttttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||||||||| ||||||||||||  |  || |||||| ||||||||||||||    
T  76559 ttttggttgtcacaaaagttgtcacatatatggatgttaaaataacacaactc 76507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 331 - 481
Target Start/End: Original strand, 8697 - 8851
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttac----tctctatattgttttagtttttatgtcaatacctcattttctttgtaa 426  Q
    |||| ||||||||||| ||| ||| | ||||||| ||||| |||||||    ||||| | ||| ||| |||||| ||||| |||||||||| ||||||||    
T  8697 acaacttttgtgacaactttctctttcatactcatattatctttttacgttctctctctgttgctttggtttttgtgtcactacctcatttcctttgtaa 8796  T
Q  427 aattttggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    |||||||||||||  |||||||||||  |  || |||||||||||||||||||||    
T  8797 aattttggttgtcataaaagttgtcagatatatggatgttcaaataacacaactc 8851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 337 - 481
Target Start/End: Complemental strand, 16823 - 16677
Alignment:
Q  337 tttgtgacaattttgtctcttatactcacattatgtttttactctctat---attgttttagtttttatgtcaatacctcattttctttgtaaaattttg 433  Q
    |||||||||| ||| ||||| ||||||||||||| ||| |||| ||| |   |||| |||||||||| |  ||||||||||||||||||||||| | |||    
T  16823 tttgtgacaactttctctctcatactcacattatctttatactttctctcttattgctttagtttttgtaccaatacctcattttctttgtaaa-tgttg 16725  T
Q  434 gttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
     |||||| |||||||||||| | ||| ||||||||||||||| |||||    
T  16724 attgtcttaaaagttgtcatataaatggatgttcaaataacagaactc 16677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 337 - 481
Target Start/End: Original strand, 56021 - 56167
Alignment:
Q  337 tttgtgacaattttgtctcttatactcacattatgtttttactctctat---attgttttagtttttatgtcaatacctcattttctttgtaaaattttg 433  Q
    |||||||||| ||| ||||| ||||||||||||| ||| |||| ||| |   |||| |||||||||| |  ||||||||||||||||||||||| | |||    
T  56021 tttgtgacaactttctctctcatactcacattatctttatactttctctcttattgctttagtttttgtaccaatacctcattttctttgtaaa-tgttg 56119  T
Q  434 gttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
     |||||| |||||||||||| | ||| ||||||||||||||| |||||    
T  56120 attgtcttaaaagttgtcatataaatggatgttcaaataacagaactc 56167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 336 - 481
Target Start/End: Original strand, 49329 - 49478
Alignment:
Q  336 ttttgtgacaattttgtctcttatactcacattatgtttttactctcta----tattgttttagtttttatgtcaatacctcattttctttgtaaaattt 431  Q
    |||| |||||| ||| ||||| ||||||||||||| |||||||| |||     |||| |||| |||||| ||||| |||||||||| |||||||||||||    
T  49329 ttttatgacaactttctctctcatactcacattatctttttactttctcactctattattttggtttttgtgtcactacctcatttcctttgtaaaattt 49428  T
Q  432 tggttgtctcaaaagttgtcatgtgaatagatgttcaaataacacaactc 481  Q
    ||||| || ||||||||||||  |  || ||||||||||||||| |||||    
T  49429 tggttatcacaaaagttgtcacatatatggatgttcaaataacataactc 49478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 378 - 439
Target Start/End: Original strand, 35603 - 35664
Alignment:
Q  378 ctctctatattgttttagtttttatgtcaatacctcattttctttgtaaaattttggttgtc 439  Q
    |||||| ||||| ||| |||||| ||||| |||||||||||||||||||||||||| |||||    
T  35603 ctctctctattgctttggtttttgtgtcactacctcattttctttgtaaaattttgattgtc 35664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 331 - 427
Target Start/End: Original strand, 89989 - 90087
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttac--tctctatattgttttagtttttatgtcaatacctcattttctttgtaaa 427  Q
    |||| ||||||||||| ||| ||||| ||||||| || ||||||||||  | ||| ||||  ||| |||||||||||||||| | ||||||||||||||    
T  89989 acaacttttgtgacaactttttctctcatactcatatcatgtttttactttttctctattcctttggtttttatgtcaatacttaattttctttgtaaa 90087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 333 - 439
Target Start/End: Complemental strand, 11003 - 10893
Alignment:
Q  333 aatttttgtgacaattttgtctcttatactcacattatgtttttact----ctctatattgttttagtttttatgtcaatacctcattttctttgtaaaa 428  Q
    ||||||| ||| |||||| || || ||||||||||||| ||||||||    |||| |||| ||||  ||||| ||| | ||||||||||||||| |||||    
T  11003 aatttttttgataattttctccctcatactcacattatctttttactttctctctctattattttgatttttgtgttactacctcattttctttataaaa 10904  T
Q  429 ttttggttgtc 439  Q
    ||||| |||||    
T  10903 ttttgattgtc 10893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 34835 - 34787
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    ||||||||| |||||| ||| ||||| ||||||||||||||||||||||    
T  34835 acaatttttatgacaactttctctctcatactcacattatgtttttact 34787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 331 - 379
Target Start/End: Original strand, 12527 - 12575
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttact 379  Q
    |||||||||||||||| ||| ||||||||||||| ||||| ||||||||    
T  12527 acaatttttgtgacaactttctctcttatactcatattatatttttact 12575  T

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Target: scaffold0687 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 410
Target Start/End: Complemental strand, 1387 - 1308
Alignment:
Q  331 acaatttttgtgacaattttgtctcttatactcacattatgtttttactctctatattgttttagtttttatgtcaatac 410  Q
    |||| ||||||||||||||| | | | |||||||| ||||||||||| ||||| ||||| | |||||||  |||||||||    
T  1387 acaacttttgtgacaattttctttttcatactcactttatgtttttattctctctattgctatagttttcgtgtcaatac 1308  T

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Target: scaffold0508 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 341 - 383
Target Start/End: Complemental strand, 11568 - 11526
Alignment:
Q  341 tgacaattttgtctcttatactcacattatgtttttactctct 383  Q
    |||||||||| ||||| |||||||||||||||||||| |||||    
T  11568 tgacaattttctctctcatactcacattatgtttttattctct 11526  T

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Target: scaffold0432 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 293 - 368
Target Start/End: Complemental strand, 6599 - 6524
Alignment:
Q  293 tttaaatagagaaatgatattttaacaatcannnnnnnacaatttttgtgacaattttgtctcttatactcacatt 368  Q
    ||||| |||||||||||||||| ||||||||       |||| ||||||||||| ||| ||||| |||||||||||    
T  6599 tttaagtagagaaatgatatttgaacaatcattttttaacaacttttgtgacaactttatctctcatactcacatt 6524  T

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