View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2827_high_13 (Length: 339)
Name: NF2827_high_13
Description: NF2827
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2827_high_13 |
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Alignment Details
Target: chr2 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 29649802 - 29650121
Alignment:
| Q |
1 |
tcaaacatcaacaaagttgtgaatggtggtgtgccaatcctcatttcaacagcatatatgttagaaatagttggcacaagtggttgaaaagtttgtgggg |
100 |
Q |
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| T |
29649802 |
tcaaacatcaacaaagttgtgaatggtggtgtgccaatcctcatttcaacagcatatatgttagaaatagttgggacaagtggttgaaaagtttgtgggg |
29649901 |
T |
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| Q |
101 |
atattgcattggtgttgttcatttgatacttaagagcatgaatttttgagagttggactaatttattgtgtttctcttcaagagaaatgtttttgggaaa |
200 |
Q |
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| T |
29649902 |
atattgcattggtgttgttcatttgatacttaagagcatgaatttttgagagttggactaatctattgtgtttctcttcaagagaaatgtttttgggaaa |
29650001 |
T |
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| Q |
201 |
gagcaatgaatcaaagtttactcgtgggattaatttcattgagaaagacatggttcctatgggaatgtagacacaaaataacacaaagagtgttaagaaa |
300 |
Q |
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| T |
29650002 |
gagaattgaatcaaagtttactcgtgggattaatttcattgagaaagacatggttcctatgggaatgtagacacaaaataacacaaagagtgttaagaaa |
29650101 |
T |
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| Q |
301 |
ctaaatgaagaagccatttt |
320 |
Q |
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|||||||||||||||||||| |
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| T |
29650102 |
ctaaatgaagaagccatttt |
29650121 |
T |
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