View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2827_high_20 (Length: 266)
Name: NF2827_high_20
Description: NF2827
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2827_high_20 |
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Alignment Details
Target: chr2 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 17 - 248
Target Start/End: Original strand, 45698158 - 45698389
Alignment:
| Q |
17 |
aacctgtgcaattagaaaaggaaaagaaattaacagacattctcatcaaatcatacaatgtatctgcttatatagagtcctagaggatacatacgagttg |
116 |
Q |
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| T |
45698158 |
aacctgtgcaattagaaaaggaaaagaaattaacagacattctcatcaaatcatacaatgtatatgcttaaatagagtcctagaggatacatacgagttg |
45698257 |
T |
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| Q |
117 |
aacaatgatgaaaatgaatgcatgatctctggcaacaagaaactgaaatttcaatctcaaccaccaacgatctttagggacatttggtcgaattatgaag |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45698258 |
aacaatgatgaaaatgaatgcatgatctctggcaacaagaaactgaaatttcaatctcaaccaccaacgatctttagggacatttggtcgaattatgaag |
45698357 |
T |
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| Q |
217 |
agagctctgcattcagtacagtgagaaaaagc |
248 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
45698358 |
agagctctgcattcagtacagtgagaaaaagc |
45698389 |
T |
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