View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2827_low_5 (Length: 490)
Name: NF2827_low_5
Description: NF2827
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2827_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 452; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 452; E-Value: 0
Query Start/End: Original strand, 20 - 483
Target Start/End: Original strand, 46892243 - 46892706
Alignment:
| Q |
20 |
ccctcctcatacccctccaaatggtcccctcttcttttgggcctacatcttctacctctcaaaatatcttgaattcattgacactctcttcataatccta |
119 |
Q |
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| T |
46892243 |
ccctcctcatacccctccaaatggtcccctcttcttttgggcctacatcttctacctctcaaaatatcttgaattcattgacactctcttcatcatccta |
46892342 |
T |
|
| Q |
120 |
tcaagatccatcaaacgcctctcattcctccacgtgtaccatcattcaaccgtcccagtcatgtgttatctatggcttaattcttctcaatcactcttcc |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46892343 |
tcaagatccatcaaacgcctctcattcctccacgtgtaccatcattcaaccgtcccagtcatgtgttatctatggcttaattcttctcaatcactcttcc |
46892442 |
T |
|
| Q |
220 |
ctattgcacttcttaccaactcatccgtccacgtcatcatgtactcttactacttcctcaccaccgttggtatccgaccgccttggaaacgcgtcgttac |
319 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
46892443 |
ctattgcacttcttaccaactcatccgtccacgtcatcatgtactcttactacttcctcaccaccgttggaatccgaccgccttggaaacgcgtcgttac |
46892542 |
T |
|
| Q |
320 |
cgactgccagattgttcagttcgtgttcagcttcgccgtctccggtctcatgctttattatcacttcggatccgatggtggtggatgctctgggatgaag |
419 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
46892543 |
cgactgccagattgttcagttcgtgttcagcttcgccgtctccggtctcatgctttattatcacttcggatccgatggtggtggatgctgtgggatgaag |
46892642 |
T |
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| Q |
420 |
gcttggtgtttcaatgctgtttttaatgcttctcttttggctctttttcttgattttcatctca |
483 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46892643 |
gcttggtgtttcaatgctgtttttaatgcttctcttttggctctttttcttgattttcatctca |
46892706 |
T |
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