View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2828_low_10 (Length: 268)
Name: NF2828_low_10
Description: NF2828
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2828_low_10 |
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Alignment Details
Target: chr3 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 23895674 - 23895922
Alignment:
| Q |
1 |
ggacatatttcaaccaattcaaacaaaaaattggctcgttttgaaaagattcaagaaatatattaaactaagtagaattaaggtacatagatacaatttt |
100 |
Q |
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|||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23895674 |
ggacatatttcaaccaattcaaaccaaaaattggcatgttttgaaaagattcaagaaatatattaaactaagtagaattaaggtacatagatacaatttt |
23895773 |
T |
|
| Q |
101 |
ttacacctgttgagctctccatagactcatcatttctcaaactacccaaagaaacattacaaaagccacaccaaaattacacaccatattcagtaactag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
23895774 |
ttacacctgttgagctctccatagactcatcatttctcaaactacccaaagaaacattacaaaagccacaccaagattacacaccatattcagtaactag |
23895873 |
T |
|
| Q |
201 |
tgtatcaaaaagcttttcagcatcaagaacaccatttaggggaagactg |
249 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23895874 |
tgtatcaaaaagcttttcagcatcaagaacaccatttaggggaagactg |
23895922 |
T |
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