View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2832_high_8 (Length: 211)
Name: NF2832_high_8
Description: NF2832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2832_high_8 |
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Alignment Details
Target: chr5 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 4386829 - 4386666
Alignment:
| Q |
31 |
ccaaacataatcatacttatgtggcctaaaccaaacttaaattggtcaagtttagattactaccaagtgtaaagcatgttataagatgtaaagtcctaac |
130 |
Q |
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| T |
4386829 |
ccaaacataatcatacttatgtggccttaaccaaacttaaattggtcaagtttagattactaccaagtgtaaatcatgttataagatgtaaagtcctaac |
4386730 |
T |
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| Q |
131 |
tagagattggtagaaagtgaagtgttgttgaggtttgatataaagttacattacctgacctatg |
194 |
Q |
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|||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4386729 |
tagagagtggtggaaagtgaagtgttgttgaggtttgatataaagttacattacctgacctatg |
4386666 |
T |
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