View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2835_low_16 (Length: 359)

Name: NF2835_low_16
Description: NF2835
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2835_low_16
NF2835_low_16
[»] chr5 (5 HSPs)
chr5 (1-141)||(15328138-15328278)
chr5 (1-141)||(18710481-18710621)
chr5 (224-353)||(15328361-15328490)
chr5 (224-353)||(18710269-18710398)
chr5 (1-103)||(725859-725961)
[»] chr4 (3 HSPs)
chr4 (228-353)||(14934581-14934706)
chr4 (1-141)||(14934793-14934930)
chr4 (1-103)||(114671-114773)
[»] chr8 (2 HSPs)
chr8 (225-353)||(45496810-45496938)
chr8 (1-141)||(45496589-45496726)
[»] scaffold0096 (1 HSPs)
scaffold0096 (1-103)||(51538-51640)
[»] chr7 (1 HSPs)
chr7 (1-103)||(609255-609357)
[»] chr6 (5 HSPs)
chr6 (1-103)||(8997369-8997471)
chr6 (1-103)||(9006552-9006654)
chr6 (1-100)||(11376322-11376421)
chr6 (12-104)||(17945639-17945731)
chr6 (1-100)||(27748365-27748464)
[»] chr3 (4 HSPs)
chr3 (1-103)||(19687320-19687422)
chr3 (12-104)||(25508736-25508828)
chr3 (63-97)||(19638294-19638328)
chr3 (260-326)||(25508984-25509050)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-103)||(84345-84447)
[»] scaffold0500 (1 HSPs)
scaffold0500 (1-103)||(6376-6478)
[»] chr2 (1 HSPs)
chr2 (1-103)||(24991576-24991678)
[»] scaffold0021 (1 HSPs)
scaffold0021 (11-100)||(165804-165893)
[»] chr1 (1 HSPs)
chr1 (228-326)||(24053700-24053804)


Alignment Details
Target: chr5 (Bit Score: 133; Significance: 4e-69; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 15328138 - 15328278
Alignment:
Q  1 gtaccaaggctttttcttgactgttatgaggcatttctgcagtagaagttagtaaagttttgggtacccatatctttttgggtccttcatggttagtgtt 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15328138 gtaccaaggctttttcttgactgttatgaggcattcctgcagtagaagttagtaaagttttgggtacccatatctttttgggtccttcatggttagtgtt 15328237  T
Q  101 atttcttaaaaaatttcctttatggaacttggtgatatttg 141  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  15328238 atttcttaaaaaatttcctttacggaacttggtgatatttg 15328278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 18710621 - 18710481
Alignment:
Q  1 gtaccaaggctttttcttgactgttatgaggcatttctgcagtagaagttagtaaagttttgggtacccatatctttttgggtccttcatggttagtgtt 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18710621 gtaccaaggctttttcttgactgttatgaggcattcctgcagtagaagttagtaaagttttgggtacccatatttttttgggtccttcatggttagtgtt 18710522  T
Q  101 atttcttaaaaaatttcctttatggaacttggtgatatttg 141  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  18710521 atttcttaaaaaatttcctttacggaacttggtgatatttg 18710481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 224 - 353
Target Start/End: Original strand, 15328361 - 15328490
Alignment:
Q  224 gcagtatgtacatttatatctttctatctttttgttaggaataaaaagatcttcatacattttttgtttatgatcagttttaaaacctatgcaagtttta 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15328361 gcagtatgtacatttatatctttctatctttttgttaggaataaaaagatcttcatacattttttgtttgtgatcagttttaaaacctatgcaagtttta 15328460  T
Q  324 tcatgataactcttttgaactcctatgata 353  Q
    ||||||||| | ||||||||||||||||||    
T  15328461 tcatgataatttttttgaactcctatgata 15328490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 224 - 353
Target Start/End: Complemental strand, 18710398 - 18710269
Alignment:
Q  224 gcagtatgtacatttatatctttctatctttttgttaggaataaaaagatcttcatacattttttgtttatgatcagttttaaaacctatgcaagtttta 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18710398 gcagtatgtacatttatatctttctatctttttgttaggaataaaaagatcttcatacattttttgtttgtgatcagttttaaaacctatgcaagtttta 18710299  T
Q  324 tcatgataactcttttgaactcctatgata 353  Q
    ||||||||| | ||||||||||||||||||    
T  18710298 tcatgataatttttttgaactcctatgata 18710269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 725859 - 725961
Alignment:
Q  1 gtaccaaggctttttcttgactgttatgaggcatttctgcagtagaagttagtaaagttttgggtacccatatctttttgggtccttcatggttagtgtt 100  Q
    |||||| ||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||| ||||||||||||| ||||||||||||    
T  725859 gtaccagggctttttcttgactgttatgagacattcctgcagtagaagttagtaatgctttgggtacccatatttttttgggtccttgatggttagtgtt 725958  T
Q  101 att 103  Q
    |||    
T  725959 att 725961  T

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Target: chr4 (Bit Score: 106; Significance: 6e-53; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 228 - 353
Target Start/End: Complemental strand, 14934706 - 14934581
Alignment:
Q  228 tatgtacatttatatctttctatctttttgttaggaataaaaagatcttcatacattttttgtttatgatcagttttaaaacctatgcaagttttatcat 327  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||     
T  14934706 tatgtacatttatatctttctgtctttttgttaggaataaaaagatcttcatacattttttgtttgtgatcagttttaaaacctatgcaagttttatcag 14934607  T
Q  328 gataactcttttgaactcctatgata 353  Q
     |||| ||||||||||||||||||||    
T  14934606 aataattcttttgaactcctatgata 14934581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 14934930 - 14934793
Alignment:
Q  1 gtaccaaggctttttcttgactgttatgaggcatttctgcagtagaagttagtaaagttttgggtacccatatctttttgggtccttcatggttagtgtt 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||    
T  14934930 gtaccaaggctttttcttgactgttatgaggcattcctgcagtagaagttagtagagtcttgggtacccatatttttttgggtccttcatggttagtgtt 14934831  T
Q  101 atttcttaaaaaatttcctttatggaacttggtgatatttg 141  Q
    ||   |||| ||||||||||||||||||| ||||| |||||    
T  14934830 at---ttaagaaatttcctttatggaactgggtgagatttg 14934793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 114773 - 114671
Alignment:
Q  1 gtaccaaggctttttcttgactgttatgaggcatttctgcagtagaagttagtaaagttttgggtacccatatctttttgggtccttcatggttagtgtt 100  Q
    |||||| ||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||| ||||||||||||| ||||||||||||    
T  114773 gtaccagggctttttcttgactgttatgagacattcctgcagtagaagttagtaatgctttgggtacccatatttttttgggtccttgatggttagtgtt 114674  T
Q  101 att 103  Q
    |||    
T  114673 att 114671  T

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Target: chr8 (Bit Score: 101; Significance: 5e-50; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 225 - 353
Target Start/End: Original strand, 45496810 - 45496938
Alignment:
Q  225 cagtatgtacatttatatctttctatctttttgttaggaataaaaagatcttcatacattttttgtttatgatcagttttaaaacctatgcaagttttat 324  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||    
T  45496810 cagtatgtacatttatatctttctgtctttttgttaggaataaaaagatcttcatatattttctgtttgtgatcagttttaaaacctatgcaagttttat 45496909  T
Q  325 catgataactcttttgaactcctatgata 353  Q
    ||  |||| ||||||||||||||||||||    
T  45496910 cagaataattcttttgaactcctatgata 45496938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 45496589 - 45496726
Alignment:
Q  1 gtaccaaggctttttcttgactgttatgaggcatttctgcagtagaagttagtaaagttttgggtacccatatctttttgggtccttcatggttagtgtt 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||    
T  45496589 gtaccaaggctttttcttgactgttatgaggcattcctgcagtagaagttagtagagtcttgggtacccatatttttttgggtccttcatggttagtgtt 45496688  T
Q  101 atttcttaaaaaatttcctttatggaacttggtgatatttg 141  Q
    ||||   |  ||||||||||||||||||| ||||| |||||    
T  45496689 attt---acgaaatttcctttatggaactgggtgagatttg 45496726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 51640 - 51538
Alignment:
Q  1 gtaccaaggctttttcttgactgttatgaggcatttctgcagtagaagttagtaaagttttgggtacccatatctttttgggtccttcatggttagtgtt 100  Q
    |||||| ||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||| ||||||||||||| ||||||||||||    
T  51640 gtaccagggctttttcttgactgttatgagacattcctgcagtagaagttagtaatgctttgggtacccatatttttttgggtccttgatggttagtgtt 51541  T
Q  101 att 103  Q
    |||    
T  51540 att 51538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 609357 - 609255
Alignment:
Q  1 gtaccaaggctttttcttgactgttatgaggcatttctgcagtagaagttagtaaagttttgggtacccatatctttttgggtccttcatggttagtgtt 100  Q
    |||||| ||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||| ||||||||||||| ||||||||||||    
T  609357 gtaccagggctttttcttgactgttatgagacattcctgcagtagaagttagtaatgctttgggtacccatatttttttgggtccttgatggttagtgtt 609258  T
Q  101 att 103  Q
    |||    
T  609257 att 609255  T

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Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 8997471 - 8997369
Alignment:
Q  1 gtaccaaggctttttcttgactgttatgaggcatttctgcagtagaagttagtaaagttttgggtacccatatctttttgggtccttcatggttagtgtt 100  Q
    |||||| ||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||| ||||||||||||| ||||||||||||    
T  8997471 gtaccagggctttttcttgactgttatgagacattcctgcagtagaagttagtaatgctttgggtacccatatttttttgggtccttgatggttagtgtt 8997372  T
Q  101 att 103  Q
    |||    
T  8997371 att 8997369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 9006654 - 9006552
Alignment:
Q  1 gtaccaaggctttttcttgactgttatgaggcatttctgcagtagaagttagtaaagttttgggtacccatatctttttgggtccttcatggttagtgtt 100  Q
    |||||| ||||||||||||||||||||||| |||| ||||||||||||||||||  | ||||||||||||||  ||| ||||||||| ||||||||||||    
T  9006654 gtaccagggctttttcttgactgttatgagacattcctgcagtagaagttagtagtgctttgggtacccataattttctgggtccttgatggttagtgtt 9006555  T
Q  101 att 103  Q
    |||    
T  9006554 att 9006552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 11376421 - 11376322
Alignment:
Q  1 gtaccaaggctttttcttgactgttatgaggcatttctgcagtagaagttagtaaagttttgggtacccatatctttttgggtccttcatggttagtgtt 100  Q
    |||||||||||||||||||||||||||||| |||| ||||||||  ||||||||  ||||||| ||||||||| ||| ||||||||| ||||||||||||    
T  11376421 gtaccaaggctttttcttgactgttatgagacattcctgcagtatgagttagtagtgttttggatacccatatttttctgggtccttgatggttagtgtt 11376322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 17945731 - 17945639
Alignment:
Q  12 ttttcttgactgttatgaggcatttctgcagtagaagttagtaaagttttgggtacccatatctttttgggtccttcatggttagtgttattt 104  Q
    ||||||||||| | ||||| |||| ||||| ||||||||||||  ||||||||||||||||| ||||||||||||   |||||||||||||||    
T  17945731 ttttcttgactatcatgagacattcctgcaatagaagttagtagtgttttgggtacccatatttttttgggtcctatgtggttagtgttattt 17945639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 27748365 - 27748464
Alignment:
Q  1 gtaccaaggctttttcttgactgttatgaggcatttctgcagtagaagttagtaaagttttgggtacccatatctttttgggtccttcatggttagtgtt 100  Q
    |||||||||||||||||||||||| ||||| |||| ||||||||  ||||| ||   |||| ||||||||||| ||| ||||||||| ||||||||||||    
T  27748365 gtaccaaggctttttcttgactgtcatgagacattcctgcagtatgagttaatattttttttggtacccatatttttctgggtccttgatggttagtgtt 27748464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 2e-34; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 19687422 - 19687320
Alignment:
Q  1 gtaccaaggctttttcttgactgttatgaggcatttctgcagtagaagttagtaaagttttgggtacccatatctttttgggtccttcatggttagtgtt 100  Q
    |||||| ||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||| ||||||||||||| ||||||||||||    
T  19687422 gtaccagggctttttcttgactgttatgagacattcctgcagtagaagttagtaatgctttgggtacccatatttttttgggtccttgatggttagtgtt 19687323  T
Q  101 att 103  Q
    |||    
T  19687322 att 19687320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 25508736 - 25508828
Alignment:
Q  12 ttttcttgactgttatgaggcatttctgcagtagaagttagtaaagttttgggtacccatatctttttgggtccttcatggttagtgttattt 104  Q
    ||||||||| ||| ||| | |||| |||| |||||||||||||  || |||||||||||||||||||||||||||| ||||||||||||||||    
T  25508736 ttttcttgattgtcatgtgacattcctgctgtagaagttagtagtgtcttgggtacccatatctttttgggtccttgatggttagtgttattt 25508828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 97
Target Start/End: Complemental strand, 19638328 - 19638294
Alignment:
Q  63 ggtacccatatctttttgggtccttcatggttagt 97  Q
    ||||||||||||||||||||||||| |||||||||    
T  19638328 ggtacccatatctttttgggtcctttatggttagt 19638294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 326
Target Start/End: Original strand, 25508984 - 25509050
Alignment:
Q  260 aggaataaaaagatcttcatacattttttgtttatgatcagttttaaaacctatgcaagttttatca 326  Q
    ||||||||| |||| || ||| | ||| || |||||||  |||||||||||||||||||||||||||    
T  25508984 aggaataaagagatttttataaagtttatgcttatgatttgttttaaaacctatgcaagttttatca 25509050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 84447 - 84345
Alignment:
Q  1 gtaccaaggctttttcttgactgttatgaggcatttctgcagtagaagttagtaaagttttgggtacccatatctttttgggtccttcatggttagtgtt 100  Q
    |||||| ||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||| ||||||||||||| |||| |||||||    
T  84447 gtaccagggctttttcttgactgttatgagacattcctgcagtagaagttagtaatgctttgggtacccatatttttttgggtccttgatggatagtgtt 84348  T
Q  101 att 103  Q
    |||    
T  84347 att 84345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 6478 - 6376
Alignment:
Q  1 gtaccaaggctttttcttgactgttatgaggcatttctgcagtagaagttagtaaagttttgggtacccatatctttttgggtccttcatggttagtgtt 100  Q
    |||||| ||||||||||||| ||||||||| |||| |||||||||||||||||||    |||||||||||||| ||||||||||||| ||||||||||||    
T  6478 gtaccagggctttttcttgattgttatgagacattcctgcagtagaagttagtaataccttgggtacccatatttttttgggtccttgatggttagtgtt 6379  T
Q  101 att 103  Q
    |||    
T  6378 att 6376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 24991678 - 24991576
Alignment:
Q  1 gtaccaaggctttttcttgactgttatgaggcatttctgcagtagaagttagtaaagttttgggtacccatatctttttgggtccttcatggttagtgtt 100  Q
    |||||| ||||||||||||||||||||||| |||| ||||||||||| |||||||    |||||||||||||| ||||||||||||| ||||||||||||    
T  24991678 gtaccagggctttttcttgactgttatgagacattcctgcagtagaaattagtaatacattgggtacccatatttttttgggtccttgatggttagtgtt 24991579  T
Q  101 att 103  Q
    |||    
T  24991578 att 24991576  T

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Target: scaffold0021 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 165893 - 165804
Alignment:
Q  11 tttttcttgactgttatgaggcatttctgcagtagaagttagtaaagttttgggtacccatatctttttgggtccttcatggttagtgtt 100  Q
    |||||||| ||||| ||||| |||| ||||||||  ||||||||   |||||||||||||||| ||| ||||||||| ||||||||||||    
T  165893 tttttctttactgtcatgagacattcctgcagtatgagttagtagttttttgggtacccatatttttctgggtccttgatggttagtgtt 165804  T

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Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 24053804 - 24053700
Alignment:
Q  228 tatgtacatttatatctttctatctttttg------ttaggaataaaaagatcttcatacattttttgtttatgatcagttttaaaacctatgcaagttt 321  Q
    |||||||||||||||||||| | |||||||      || |||||||| | || |||||| || |||||||||||||  ||||||||||| ||||||||||    
T  24053804 tatgtacatttatatctttccacctttttgatttttttgggaataaagaaattttcatatatcttttgtttatgatttgttttaaaaccgatgcaagttt 24053705  T
Q  322 tatca 326  Q
    |||||    
T  24053704 tatca 24053700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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