View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2835_low_20 (Length: 317)

Name: NF2835_low_20
Description: NF2835
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2835_low_20
NF2835_low_20
[»] chr7 (33 HSPs)
chr7 (17-305)||(39931003-39931292)
chr7 (30-275)||(36363991-36364236)
chr7 (35-233)||(4937553-4937751)
chr7 (32-233)||(17721152-17721353)
chr7 (35-233)||(234863-235061)
chr7 (40-233)||(11276678-11276871)
chr7 (40-233)||(29968491-29968684)
chr7 (47-230)||(31423122-31423305)
chr7 (66-233)||(47877500-47877666)
chr7 (18-84)||(9978703-9978769)
chr7 (39-111)||(13553613-13553685)
chr7 (100-230)||(37255278-37255408)
chr7 (66-219)||(25018774-25018927)
chr7 (55-200)||(17056079-17056224)
chr7 (39-111)||(18768047-18768119)
chr7 (33-111)||(32815738-32815816)
chr7 (42-111)||(34457590-34457659)
chr7 (31-111)||(9895537-9895617)
chr7 (92-211)||(17504041-17504160)
chr7 (92-211)||(17549054-17549173)
chr7 (40-211)||(19544832-19545003)
chr7 (25-200)||(27218537-27218712)
chr7 (28-219)||(45164977-45165168)
chr7 (66-180)||(41805215-41805328)
chr7 (47-111)||(11341435-11341500)
chr7 (38-111)||(23887722-23887795)
chr7 (38-111)||(23898898-23898971)
chr7 (40-111)||(19735157-19735229)
chr7 (55-111)||(22819162-22819218)
chr7 (146-199)||(6335940-6335993)
chr7 (29-105)||(587530-587606)
chr7 (139-219)||(11341327-11341407)
chr7 (69-113)||(15653166-15653210)
[»] scaffold0034 (1 HSPs)
scaffold0034 (35-233)||(105268-105466)
[»] chr8 (33 HSPs)
chr8 (35-233)||(7924903-7925101)
chr8 (35-233)||(8300320-8300518)
chr8 (35-233)||(41664793-41664991)
chr8 (32-233)||(9923118-9923319)
chr8 (35-233)||(172464-172662)
chr8 (24-233)||(20824816-20825025)
chr8 (31-230)||(13878908-13879107)
chr8 (31-230)||(25090907-25091105)
chr8 (42-219)||(36492912-36493089)
chr8 (31-230)||(17700000-17700199)
chr8 (40-163)||(32267141-32267264)
chr8 (151-250)||(38046858-38046957)
chr8 (66-180)||(12332418-12332532)
chr8 (40-111)||(24794385-24794456)
chr8 (31-180)||(43271007-43271155)
chr8 (31-122)||(37434380-37434471)
chr8 (39-111)||(11393777-11393849)
chr8 (39-111)||(43249234-43249305)
chr8 (38-229)||(37165549-37165740)
chr8 (42-230)||(42176987-42177172)
chr8 (185-287)||(43283248-43283350)
chr8 (27-111)||(16048333-16048417)
chr8 (40-179)||(8902398-8902537)
chr8 (27-111)||(5585328-5585412)
chr8 (136-219)||(4310368-4310451)
chr8 (27-122)||(18187774-18187869)
chr8 (39-122)||(23942715-23942798)
chr8 (39-109)||(10530306-10530376)
chr8 (29-111)||(27288715-27288797)
chr8 (45-113)||(6245719-6245787)
chr8 (55-111)||(40366287-40366343)
chr8 (22-89)||(14345331-14345398)
chr8 (39-111)||(25320450-25320522)
[»] chr4 (36 HSPs)
chr4 (35-233)||(23642016-23642214)
chr4 (35-233)||(23647674-23647872)
chr4 (31-230)||(55725127-55725326)
chr4 (35-233)||(47419321-47419519)
chr4 (35-233)||(1827965-1828163)
chr4 (35-233)||(19755784-19755982)
chr4 (35-233)||(19783824-19784022)
chr4 (35-233)||(15740737-15740935)
chr4 (31-230)||(48312614-48312813)
chr4 (31-233)||(46146194-46146396)
chr4 (12-232)||(5789494-5789714)
chr4 (39-230)||(11586627-11586818)
chr4 (31-230)||(54482580-54482779)
chr4 (40-111)||(42952935-42953006)
chr4 (39-219)||(7099013-7099193)
chr4 (40-112)||(43516178-43516250)
chr4 (39-125)||(19115061-19115147)
chr4 (39-125)||(26694553-26694639)
chr4 (49-111)||(51072132-51072194)
chr4 (31-152)||(19733402-19733523)
chr4 (136-219)||(19162703-19162786)
chr4 (186-233)||(19735311-19735358)
chr4 (39-225)||(8935599-8935785)
chr4 (29-87)||(25136067-25136125)
chr4 (136-229)||(36183058-36183151)
chr4 (66-198)||(38296258-38296390)
chr4 (39-167)||(7662737-7662865)
chr4 (185-225)||(23657822-23657862)
chr4 (75-110)||(13841794-13841829)
chr4 (26-113)||(23872892-23872979)
chr4 (136-219)||(40688597-40688680)
chr4 (25-122)||(5633850-5633947)
chr4 (46-111)||(48805617-48805682)
chr4 (28-84)||(19162595-19162651)
chr4 (29-105)||(29122839-29122914)
chr4 (147-199)||(54685161-54685213)
[»] chr3 (39 HSPs)
chr3 (35-233)||(2364794-2364992)
chr3 (35-233)||(34332240-34332438)
chr3 (31-246)||(962584-962799)
chr3 (35-233)||(10322996-10323194)
chr3 (35-233)||(19919654-19919852)
chr3 (31-230)||(19891197-19891396)
chr3 (31-230)||(48569460-48569659)
chr3 (33-233)||(3141368-3141568)
chr3 (35-233)||(16179464-16179662)
chr3 (31-227)||(12341676-12341872)
chr3 (49-219)||(52250564-52250733)
chr3 (27-236)||(20531470-20531677)
chr3 (42-198)||(48930278-48930434)
chr3 (39-111)||(21739952-21740024)
chr3 (40-111)||(14863895-14863966)
chr3 (39-111)||(10868242-10868314)
chr3 (39-111)||(15481187-15481259)
chr3 (25-200)||(31675481-31675656)
chr3 (74-200)||(6825372-6825498)
chr3 (39-219)||(25024273-25024453)
chr3 (25-113)||(34830030-34830118)
chr3 (39-111)||(36709549-36709621)
chr3 (136-219)||(8130482-8130565)
chr3 (25-200)||(31920766-31920941)
chr3 (40-198)||(40513154-40513312)
chr3 (55-180)||(44888474-44888599)
chr3 (27-111)||(22734140-22734224)
chr3 (29-105)||(23604008-23604084)
chr3 (39-111)||(45684815-45684887)
chr3 (26-113)||(30166760-30166847)
chr3 (31-113)||(3271119-3271201)
chr3 (39-111)||(1231653-1231725)
chr3 (55-111)||(31548017-31548073)
chr3 (40-111)||(46908100-46908171)
chr3 (66-180)||(17077754-17077868)
chr3 (38-111)||(55367249-55367321)
chr3 (47-111)||(35273726-35273790)
chr3 (29-85)||(42458703-42458758)
chr3 (39-111)||(42674868-42674940)
[»] chr5 (36 HSPs)
chr5 (31-246)||(33170162-33170377)
chr5 (35-233)||(42514237-42514435)
chr5 (35-233)||(27116598-27116796)
chr5 (35-233)||(30731739-30731937)
chr5 (32-233)||(28535098-28535298)
chr5 (35-233)||(42928648-42928846)
chr5 (32-233)||(35983213-35983414)
chr5 (40-233)||(23238900-23239093)
chr5 (24-233)||(8299596-8299805)
chr5 (31-211)||(10780740-10780920)
chr5 (66-233)||(31642028-31642195)
chr5 (31-225)||(27796009-27796203)
chr5 (42-219)||(41590627-41590804)
chr5 (31-180)||(27165386-27165535)
chr5 (24-180)||(25856853-25857009)
chr5 (42-219)||(4297741-4297918)
chr5 (39-111)||(38358106-38358178)
chr5 (39-125)||(35122135-35122221)
chr5 (40-217)||(380434-380611)
chr5 (71-200)||(476763-476892)
chr5 (19-247)||(22094659-22094887)
chr5 (185-233)||(27165525-27165573)
chr5 (136-219)||(36256309-36256392)
chr5 (155-233)||(12825716-12825794)
chr5 (26-111)||(26262292-26262377)
chr5 (26-122)||(30509463-30509559)
chr5 (26-122)||(30549803-30549899)
chr5 (39-113)||(10486348-10486423)
chr5 (26-113)||(34481585-34481672)
chr5 (139-225)||(15862206-15862292)
chr5 (29-91)||(41925734-41925796)
chr5 (139-225)||(42039234-42039320)
chr5 (31-111)||(26263407-26263487)
chr5 (34-107)||(38184033-38184106)
chr5 (34-107)||(38214251-38214324)
chr5 (185-233)||(25856999-25857047)
[»] chr1 (20 HSPs)
chr1 (35-233)||(6051120-6051318)
chr1 (35-180)||(35541604-35541749)
chr1 (39-233)||(47622506-47622700)
chr1 (39-111)||(20796296-20796368)
chr1 (39-111)||(49264393-49264465)
chr1 (39-111)||(39430916-39430988)
chr1 (25-113)||(45795912-45796000)
chr1 (55-200)||(22191227-22191372)
chr1 (26-167)||(32352726-32352867)
chr1 (48-113)||(45270878-45270943)
chr1 (45-198)||(13867268-13867421)
chr1 (25-200)||(3544516-3544691)
chr1 (25-111)||(1248001-1248087)
chr1 (49-179)||(33142652-33142782)
chr1 (66-111)||(15174746-15174791)
chr1 (39-111)||(13112717-13112789)
chr1 (75-111)||(26131910-26131946)
chr1 (66-111)||(3074384-3074429)
chr1 (66-111)||(21405476-21405521)
chr1 (66-111)||(44692059-44692104)
[»] scaffold1350 (1 HSPs)
scaffold1350 (31-236)||(58-263)
[»] chr2 (26 HSPs)
chr2 (31-229)||(14440265-14440463)
chr2 (39-233)||(28253237-28253431)
chr2 (52-287)||(37445556-37445792)
chr2 (31-180)||(12646091-12646240)
chr2 (31-230)||(33515628-33515827)
chr2 (66-219)||(43310790-43310943)
chr2 (70-219)||(26146746-26146895)
chr2 (39-111)||(11233919-11233991)
chr2 (25-111)||(33583842-33583928)
chr2 (39-111)||(9668435-9668507)
chr2 (25-113)||(11196988-11197076)
chr2 (39-111)||(28399979-28400051)
chr2 (42-122)||(35488465-35488545)
chr2 (136-219)||(13416202-13416285)
chr2 (26-149)||(13550718-13550841)
chr2 (26-149)||(13551171-13551294)
chr2 (47-225)||(20004483-20004662)
chr2 (52-180)||(37437559-37437688)
chr2 (68-113)||(15127057-15127102)
chr2 (66-126)||(10689178-10689238)
chr2 (61-113)||(42051722-42051774)
chr2 (41-113)||(43722474-43722546)
chr2 (26-113)||(45422157-45422244)
chr2 (185-247)||(15018180-15018242)
chr2 (73-119)||(30504774-30504820)
chr2 (42-111)||(36804758-36804827)
[»] chr6 (34 HSPs)
chr6 (35-233)||(2554123-2554321)
chr6 (31-233)||(17605755-17605957)
chr6 (39-230)||(14372420-14372611)
chr6 (31-233)||(13938236-13938437)
chr6 (35-179)||(24766839-24766983)
chr6 (31-230)||(10576671-10576870)
chr6 (24-232)||(18681988-18682196)
chr6 (31-180)||(21629543-21629692)
chr6 (24-227)||(17577130-17577335)
chr6 (163-236)||(10922067-10922140)
chr6 (33-230)||(20882456-20882653)
chr6 (39-111)||(13086178-13086250)
chr6 (25-174)||(14843552-14843701)
chr6 (39-180)||(15956421-15956561)
chr6 (29-105)||(17228636-17228712)
chr6 (200-287)||(5041980-5042066)
chr6 (66-113)||(34434897-34434944)
chr6 (38-122)||(1104375-1104459)
chr6 (39-111)||(21549487-21549559)
chr6 (26-149)||(15674430-15674553)
chr6 (88-197)||(18588902-18589011)
chr6 (55-200)||(29056069-29056214)
chr6 (185-225)||(5085601-5085641)
chr6 (147-219)||(15602855-15602927)
chr6 (40-232)||(32186201-32186393)
chr6 (139-229)||(26514245-26514335)
chr6 (88-193)||(7956149-7956254)
chr6 (185-246)||(24767004-24767065)
chr6 (48-125)||(33805405-33805482)
chr6 (185-225)||(503107-503147)
chr6 (185-225)||(8264748-8264788)
chr6 (79-111)||(14552041-14552073)
chr6 (31-103)||(15987931-15988003)
chr6 (79-111)||(19616348-19616380)
[»] scaffold0472 (1 HSPs)
scaffold0472 (40-233)||(3769-3962)
[»] scaffold0131 (1 HSPs)
scaffold0131 (39-167)||(3985-4113)
[»] scaffold0016 (1 HSPs)
scaffold0016 (69-180)||(28344-28455)
[»] scaffold0002 (2 HSPs)
scaffold0002 (37-167)||(327562-327692)
scaffold0002 (37-167)||(312108-312238)
[»] scaffold0043 (1 HSPs)
scaffold0043 (25-174)||(34024-34173)
[»] scaffold0029 (1 HSPs)
scaffold0029 (37-167)||(134281-134411)
[»] scaffold0309 (1 HSPs)
scaffold0309 (40-119)||(715-794)
[»] scaffold0308 (1 HSPs)
scaffold0308 (39-125)||(17770-17856)
[»] scaffold0048 (1 HSPs)
scaffold0048 (48-113)||(63737-63802)
[»] scaffold0418 (1 HSPs)
scaffold0418 (39-167)||(8187-8315)
[»] scaffold0036 (1 HSPs)
scaffold0036 (24-111)||(2993-3080)
[»] scaffold0250 (1 HSPs)
scaffold0250 (49-111)||(12464-12526)
[»] scaffold0112 (1 HSPs)
scaffold0112 (39-109)||(15090-15160)
[»] scaffold0026 (1 HSPs)
scaffold0026 (139-224)||(67606-67691)


Alignment Details
Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 17 - 305
Target Start/End: Original strand, 39931003 - 39931292
Alignment:
Q  17 gatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgttt 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  39931003 gatggtcttctgtttgtttgagaaaggagtatggagggttgggggttaggaggttgagggagcttaatattgctctgttaggtaaatggtgttggcgttt 39931102  T
Q  117 gttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttgg 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  39931103 gttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggttggaggatgggggccggagttgttcttgttgg 39931202  T
Q  217 tggtgggagatagtgagaatccgggatggggttgaaggta-ggagtgatgggtggtttgcgtcgtgtgtgtctttttgggatgatgtcca 305  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  39931203 tggtgggagatagtgagaattcgggatggggttgaaggtagggagtgatgggtggtttgtgtcgtgtgtgtctttttggtatgatgtcca 39931292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 30 - 275
Target Start/End: Complemental strand, 36364236 - 36363991
Alignment:
Q  30 ttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggt 129  Q
    ||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||    
T  36364236 ttgtttgagaaaggagtatggtgggttgggggttaggagattgagggagtttaatattgctttgttgagtaaatggtgttggcgtttgttagtggagggt 36364137  T
Q  130 gatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatag 229  Q
     ||| |||| || ||||||||||||||||||| || ||||||||||||     | ||||||||| ||||||||||||||||| ||| ||| |||||||||    
T  36364136 aatggtttggggcgtagggtgttggtggctagttaaggtgtggaggataaatagttggaggatgagggccgaagttgttcttcttgatggagggagatag 36364037  T
Q  230 tgagaatccgggatggggttgaaggtaggagtgatgggtggtttgc 275  Q
    ||||||||||||||||||| | ||||||  ||||||||||||||||    
T  36364036 tgagaatccgggatggggtaggaggtagtggtgatgggtggtttgc 36363991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 35 - 233
Target Start/End: Original strand, 4937553 - 4937751
Alignment:
Q  35 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 134  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| ||||||||||||||| | |||||| ||||| | ||||     
T  4937553 tgaggaaggagtatggagggttgggggttaagaggttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagagggatgc 4937652  T
Q  135 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    ||||||| | | |||||| ||||||||||||||||||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  4937653 tttgtggagaaaggtgttagtggctaggtatggtgtggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 4937751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 32 - 233
Target Start/End: Complemental strand, 17721353 - 17721152
Alignment:
Q  32 gtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtga 131  Q
    ||||||| ||||||||||||||||||||||||| ||||||||| ||||||||| | ||| |||| ||||||||||||||||| |||||| |||||   ||    
T  17721353 gtttgaggaaggagtatggagggttgggggttacgaggttgagagagtttaatttagctttgttgggtaaatggtgttggcggttgttattggagaagga 17721254  T
Q  132 tgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtg 231  Q
     | ||||||| | | |||||||||||||||||||||||||| ||||||  |  |||||||||||||||| ||||||||||  |||||| |||||||||||    
T  17721253 agctttgtggagaaaggtgttggtggctaggtatggtgtggcggatggaggtttggaggatgggggccggagttgttcttcatggtggagggagatagtg 17721154  T
Q  232 ag 233  Q
    ||    
T  17721153 ag 17721152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 35 - 233
Target Start/End: Original strand, 234863 - 235061
Alignment:
Q  35 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 134  Q
    |||| |||||||||||||||||||| |||| ||||||| | ||||||||||||||| |||| ||||||||||||||| | |||||| ||||| | || |     
T  234863 tgaggaaggagtatggagggttgggagttacgaggttgcgagagtttaatattgctttgttgggtaaatggtgttggtggttgttattggagagagaagc 234962  T
Q  135 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    ||||||| | | |||||| ||||||||||||||||||| ||||||  |  |||||||||||||||| ||||||||||  |||||| |||||||||||||    
T  234963 tttgtggcgaaaggtgttagtggctaggtatggtgtggcggatggaggtttggaggatgggggccggagttgttcttcgtggtggagggagatagtgag 235061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 40 - 233
Target Start/End: Original strand, 11276678 - 11276871
Alignment:
Q  40 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgt 139  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||| || | ||||||||||||||||| |||||| ||||| | || | |||||    
T  11276678 aaggagtatggagggttgggggttacgaggttgagggagtttaacattgctttggtgggtaaatggtgttggcggttgttattggagagggaagctttgt 11276777  T
Q  140 ggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    || | | |||||| ||||||||||||||||||| ||||||  |  |||||||||||| ||| |||||||| |  |||||| |||||||||||||    
T  11276778 ggagaaaggtgttagtggctaggtatggtgtggcggatggaggtttggaggatggggcccggagttgttcgtcgtggtggagggagatagtgag 11276871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 40 - 233
Target Start/End: Complemental strand, 29968684 - 29968491
Alignment:
Q  40 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgt 139  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| ||||||||||||||||| |||||| ||||| | || | |||||    
T  29968684 aaggagtatggagggttgggggttacgagattgagggagtttaatattgctttgttgggtaaatggtgttggcggttgttattggagagggaagctttgt 29968585  T
Q  140 ggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    || | | |||||| |||||||||||||| |||| ||||||  |  ||||||||| |||||| |||||||| |  |||||| |||||||||||||    
T  29968584 ggagaaaggtgttagtggctaggtatggcgtggcggatggaggtttggaggatgcgggccggagttgttcgtcgtggtggagggagatagtgag 29968491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 47 - 230
Target Start/End: Complemental strand, 31423305 - 31423122
Alignment:
Q  47 atggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtag 146  Q
    |||||||| |||| |||| ||||||||| |||||||| | |||| |||| || |||||||||||||| |||||||| ||  | |||| ||||||| ||||    
T  31423305 atggagggatgggtgttaggaggttgagagagtttaacagtgctttgttggggaaatggtgttggcggttgttagttgatagggatggtttgtggcgtag 31423206  T
Q  147 ggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 230  Q
    |||||||||||||||| ||||||||| ||||||  |  |||||||||||||||| ||||||||||  |||| | ||||||||||    
T  31423205 ggtgttggtggctaggcatggtgtggcggatggtggtttggaggatgggggccggagttgttcttcgtggttgagggagatagt 31423122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 233
Target Start/End: Complemental strand, 47877666 - 47877500
Alignment:
Q  66 gaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtat 165  Q
    ||||||||| ||||||||||||||| |||| | ||||||||||||||| |||||| ||||| | || | ||||||| |   |||||||||||||||||||    
T  47877666 gaggttgagagagtttaatattgctttgttggataaatggtgttggcggttgttattggagagggaagctttgtggcgacaggtgttggtggctaggtat 47877567  T
Q  166 ggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    ||||||| ||||||  |  |||||||| ||||||| ||||||||||  |||||| |||||||||||||    
T  47877566 ggtgtggcggatggaggtttggaggat-ggggccggagttgttcttcgtggtggagggagatagtgag 47877500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 9978703 - 9978769
Alignment:
Q  18 atggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaat 84  Q
    |||||||||||||||||| | |||||||||||| |||||||| ||||||||||||||||||||||||    
T  9978703 atggtcttctgtttgtttaaaaaaggagtatggtgggttgggcgttatgaggttgagggagtttaat 9978769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 13553613 - 13553685
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||| ||| ||||||||||||| ||||||||||||||||||| ||||| |||||| |||||||||||||    
T  13553613 aaaggagtctggggggttgggggttaggaggttgagggagtttaattttgctttgttagataaatggtgttgg 13553685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 100 - 230
Target Start/End: Complemental strand, 37255408 - 37255278
Alignment:
Q  100 aaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggcc 199  Q
    ||||| |||||||| |||||||| ||  | |||| |||| || |||||||||||||||||||||||||||||| ||||||  |  ||||||||||||||     
T  37255408 aaatgatgttggcggttgttagttgatagggatggtttggggcgtagggtgttggtggctaggtatggtgtggcggatggtggtttggaggatgggggct 37255309  T
Q  200 gaagttgttcttgttggtggtgggagatagt 230  Q
    | |||||||| |  || ||| ||||||||||    
T  37255308 ggagttgttcatcgtgatggagggagatagt 37255278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 25018774 - 25018927
Alignment:
Q  66 gaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtat 165  Q
    ||||||||||||||||||| ||||  ||||| | ||||||||||||||||| || ||| || |   |   || |||| ||||||||||||||| || |||    
T  25018774 gaggttgagggagtttaatgttgcgttgttaagaaaatggtgttggcgtttattggtgaagaggagtagcttatggtatagggtgttggtggcaagatat 25018873  T
Q  166 ggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 219  Q
    |||| ||||| |||| || |||||| |||||| |||||| |||||| |||||||    
T  25018874 ggtgaggaggctgggaggttggaggttgggggtcgaagtggttcttcttggtgg 25018927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 200
Target Start/End: Complemental strand, 17056224 - 17056079
Alignment:
Q  55 ttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttgg 154  Q
    |||||||| | |||| |||||||||||||| || ||||||||||||||||||||||| | || ||||| ||    | |  | |||||| |||||||||||    
T  17056224 ttgggggtgaggaggatgagggagtttaatgtttctctgttaggtaaatggtgttggaggttattagttgataagggtagtatgtggtatagggtgttgg 17056125  T
Q  155 tggctaggtatggtgtggaggatgggcggctggaggatgggggccg 200  Q
    ||||  | ||||||| |||||||||| || ||| || |||||||||    
T  17056124 tggcgcgttatggtgaggaggatgggaggttggtggttgggggccg 17056079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 18768119 - 18768047
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||| |||||| |||||||||| ||| |||| |||||||||||||||| |  |||||||||||||||||    
T  18768119 aaaggagtttggaggtttgggggttaggagattgaaggagtttaatattgctttactaggtaaatggtgttgg 18768047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 33 - 111
Target Start/End: Original strand, 32815738 - 32815816
Alignment:
Q  33 tttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||| ||||||||| ||| |||||||||||||   || |||||||||||||||||||||| ||||  ||||||||||||    
T  32815738 tttgggaaaggagtttggtgggttgggggttaaccggatgagggagtttaatattgctcttttagaaaaatggtgttgg 32815816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 34457590 - 34457659
Alignment:
Q  42 ggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||| ||||||| |||||||||| ||| |||| |||||||||||||||| |  |||||||||||||||||    
T  34457590 ggagcatggaggtttgggggttaggagattgaaggagtttaatattgctttactaggtaaatggtgttgg 34457659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 111
Target Start/End: Complemental strand, 9895617 - 9895537
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||| | ||||||||||||||||||| ||| | || ||| ||||| |||||||||| | || |||||||||||||||||    
T  9895617 tgtttgcgtaaggagtatggagggttggcggtgaggaagttaagggaatttaatattgatttgctaggtaaatggtgttgg 9895537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 211
Target Start/End: Original strand, 17504041 - 17504160
Alignment:
Q  92 tgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggagga 191  Q
    |||||||||| |||||||||| | ||||||| ||  | |||| | | |||| | | ||||||||||| || || |||| |||||||||| || |||||||    
T  17504041 tgttaggtaagtggtgttggcatatgttagttgatagagatggtctttggtatcgagtgttggtggcgagatacggtgaggaggatgggaggttggagga 17504140  T
Q  192 tgggggccgaagttgttctt 211  Q
    ||||||||| ||| ||||||    
T  17504141 tgggggccggagtggttctt 17504160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 211
Target Start/End: Complemental strand, 17549173 - 17549054
Alignment:
Q  92 tgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggagga 191  Q
    |||||||||| |||||||||| | ||||||| ||  | |||| | | |||| | | ||||||||||| || || |||| |||||||||| || |||||||    
T  17549173 tgttaggtaagtggtgttggcatatgttagttgatagagatggtctttggtatcgagtgttggtggcgagatacggtgaggaggatgggaggttggagga 17549074  T
Q  192 tgggggccgaagttgttctt 211  Q
    ||||||||| ||| ||||||    
T  17549073 tgggggccggagtggttctt 17549054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 211
Target Start/End: Original strand, 19544832 - 19545003
Alignment:
Q  40 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgt 139  Q
    ||||||||||||||||| ||||| | |  ||||||||||||||||| |||  | ||||| ||||||||||||||  |||| |||||  | ||||  || |    
T  19544832 aaggagtatggagggttaggggtcaggcagttgagggagtttaatagtgccttattaggcaaatggtgttggcggatgttggtggatagagatgggtttt 19544931  T
Q  140 ggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttctt 211  Q
    ||| ||||||||||| | |  | ||||||| |||||  | | || |||||| ||||||||| ||| ||||||    
T  19544932 ggtatagggtgttggcgacacgatatggtgaggaggcagagaggttggaggttgggggccggagtggttctt 19545003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 200
Target Start/End: Original strand, 27218537 - 27218712
Alignment:
Q  25 tctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgg 124  Q
    ||||||||||| | |||||||| ||||||| ||||||| | |  |||| || | |||||| | ||| |||||||||||||||||||||| |||||  | |    
T  27218537 tctgtttgtttaaaaaaggagtttggagggctgggggtgaggcagttgcggaaatttaatttagctttgttaggtaaatggtgttggcggttgttgatag 27218636  T
Q  125 agggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccg 200  Q
    |  | | ||  || |||| ||||||||||||||| || ||||||| |||||  ||| || ||| || |||||||||    
T  27218637 atagaggtggattttggtatagggtgttggtggcgagatatggtgaggaggcagggaggttggcggttgggggccg 27218712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 219
Target Start/End: Original strand, 45164977 - 45165168
Alignment:
Q  28 gtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagg 127  Q
    |||||| |||||||||||||||| || || || |||| | |||||||||||||||||   ||  ||||||| || ||||||||| | ||  | || ||      
T  45164977 gtttgtatgagaaaggagtatggtggtttaggagttaggcggttgagggagtttaatgaggcgttgttagggaagtggtgttggagattacttgttgatc 45165076  T
Q  128 gtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 219  Q
    |||  |  ||||||| | |||||||||| ||||| ||||||||   ||||||| || |||||||||| ||||| ||| |||||| |||||||    
T  45165077 gtggagggttgtggtatggggtgttggttgctagatatggtgttagggatgggaggttggaggatggaggccggagtggttctttttggtgg 45165168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 180
Target Start/End: Original strand, 41805215 - 41805328
Alignment:
Q  66 gaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtat 165  Q
    ||||||||||||||||||| ||  | ||||||| ||||||||||||||||| || |||||| |   |  ||| |||| ||||||||||||||| || |||    
T  41805215 gaggttgagggagtttaatgttcgt-tgttaggaaaatggtgttggcgtttattggtggagaggagtagtttttggtatagggtgttggtggcgagatat 41805313  T
Q  166 ggtgtggaggatggg 180  Q
    |||| ||||| ||||    
T  41805314 ggtgaggaggttggg 41805328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 11341500 - 11341435
Alignment:
Q  47 atggagggttgggggttatgaggttgagggagtttaatatt-gctctgttaggtaaatggtgttgg 111  Q
    ||||||| |||||||||| | ||||||||||||||||| || ||| ||||||| ||||||||||||    
T  11341500 atggaggtttgggggttacgcggttgagggagtttaattttagctatgttaggaaaatggtgttgg 11341435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 23887795 - 23887722
Alignment:
Q  38 gaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||| |||| ||||||||||||||| |    |||||||||||||||||| ||| ||||||| ||||||||||||    
T  23887795 gaaatgagtttggagggttgggggtcagacagttgagggagtttaatatagctttgttaggaaaatggtgttgg 23887722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 23898971 - 23898898
Alignment:
Q  38 gaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||| |||| ||||||||||||||| |    |||||||||||||||||| ||| ||||||| ||||||||||||    
T  23898971 gaaatgagtttggagggttgggggtcagacagttgagggagtttaatatagctttgttaggaaaatggtgttgg 23898898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 111
Target Start/End: Complemental strand, 19735229 - 19735157
Alignment:
Q  40 aaggagtatggagggttgggggtt-atgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    ||||||| |||||||||| ||||| | ||| |||||| |||||||| ||||  ||||||||||||||||||||    
T  19735229 aaggagtctggagggttgagggtttacgagattgaggaagtttaattttgcattgttaggtaaatggtgttgg 19735157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 22819162 - 22819218
Alignment:
Q  55 ttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||| | ||||||||||||||||||| || |||||||||| || |||||||||    
T  22819162 ttgggggtgaggaggttgagggagtttaatgtttctctgttaggcaagtggtgttgg 22819218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 199
Target Start/End: Original strand, 6335940 - 6335993
Alignment:
Q  146 gggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggcc 199  Q
    |||||||||| |||||||||||||||   |||||| || |||||||||||||||    
T  6335940 gggtgttggttgctaggtatggtgtgcgcgatgggaggttggaggatgggggcc 6335993  T

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Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 587606 - 587530
Alignment:
Q  29 tttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatgg 105  Q
    |||| ||||| |||||| |||| |||||||| ||||  || ||| |||||||||||||| || | ||||||||||||    
T  587606 tttgcttgagcaaggagaatggggggttgggtgttaaaagattgcgggagtttaatatttctttattaggtaaatgg 587530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 11341407 - 11341327
Alignment:
Q  139 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 219  Q
    |||| |||||||||||  ||||||||||||| |||||  ||| || ||||||  |||||||| |||||||| | |||||||    
T  11341407 tggtatagggtgttggctgctaggtatggtgaggaggcagggaggttggaggtcgggggccggagttgttccttttggtgg 11341327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 15653166 - 15653210
Alignment:
Q  69 gttgagggagtttaatattgctctgttaggtaaatggtgttggcg 113  Q
    ||||| ||| ||||||| |||| ||||||||||||||||||||||    
T  15653166 gttgaaggaatttaatagtgctttgttaggtaaatggtgttggcg 15653210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 35 - 233
Target Start/End: Original strand, 105268 - 105466
Alignment:
Q  35 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 134  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| ||||||||||||||| | |||||| ||||| | ||||     
T  105268 tgaggaaggagtatggagggttgggggttaagaggttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagagggatgc 105367  T
Q  135 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    ||||||| | | |||||| ||||||||||||||||||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  105368 tttgtggagaaaggtgttagtggctaggtatggtgtggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 105466  T

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Target: chr8 (Bit Score: 103; Significance: 3e-51; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 35 - 233
Target Start/End: Complemental strand, 7925101 - 7924903
Alignment:
Q  35 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 134  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| ||||||||||||||| | |||||| ||||| | ||||     
T  7925101 tgaggaaggagtatggagggttgggggttaagaggttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagagggatgc 7925002  T
Q  135 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    ||||||| | | |||||| ||||||||||||||||||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  7925001 tttgtggagaaaggtgttagtggctaggtatggtgtggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 7924903  T

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Target: chr8; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 35 - 233
Target Start/End: Complemental strand, 8300518 - 8300320
Alignment:
Q  35 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 134  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| ||||||||||||||| | |||||| ||||| | ||||     
T  8300518 tgaggaaggagtatggagggttgggggttaagaggttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagagggatgc 8300419  T
Q  135 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    ||||||| | | |||||| ||||||||||||||||||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  8300418 tttgtggagaaaggtgttagtggctaggtatggtgtggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagatcgtgag 8300320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 35 - 233
Target Start/End: Original strand, 41664793 - 41664991
Alignment:
Q  35 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 134  Q
    |||| ||||||||||||||||||||||||| ||||||||| |||||||| |||||| |||| ||||||||||||||||| |||||| ||||| | || |     
T  41664793 tgaggaaggagtatggagggttgggggttacgaggttgagagagtttaacattgctttgttgggtaaatggtgttggcggttgttattggagagggaggc 41664892  T
Q  135 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    ||||||| | | |||||| ||||||||||||||||||| ||||||  |  |||||||||||||||| ||||||||||  ||||||  ||||||||||||    
T  41664893 tttgtggaggaaggtgttagtggctaggtatggtgtggcggatggaggtttggaggatgggggccggagttgttcttcgtggtggatggagatagtgag 41664991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 32 - 233
Target Start/End: Complemental strand, 9923319 - 9923118
Alignment:
Q  32 gtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtga 131  Q
    ||||||| ||||||||||||||||||||||||| ||||||||| ||||||||| | ||| |||| | ||||||||||||||| |||||| |||||   ||    
T  9923319 gtttgaggaaggagtatggagggttgggggttacgaggttgagagagtttaatttagctttgttggataaatggtgttggcggttgttattggagaagga 9923220  T
Q  132 tgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtg 231  Q
     | ||||||| | | |||||||||||||||||||||||||| ||||||  |  |||||||||||||||| ||||||||||  |||||| |||||||||||    
T  9923219 agctttgtggagaaaggtgttggtggctaggtatggtgtggcggatggaggtttggaggatgggggccggagttgttcttcatggtggagggagatagtg 9923120  T
Q  232 ag 233  Q
    ||    
T  9923119 ag 9923118  T

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Target: chr8; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 35 - 233
Target Start/End: Original strand, 172464 - 172662
Alignment:
Q  35 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 134  Q
    |||| ||||||||||||||||||||| ||| |||||||||||||||||| |||||| |||| ||||||||||| ||| | |||||| ||||| | ||||     
T  172464 tgaggaaggagtatggagggttggggtttaagaggttgagggagtttaacattgctttgttgggtaaatggtgctggaggttgttattggagagggatgc 172563  T
Q  135 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
     |||||| | | |||||| ||||||||||||||||||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  172564 gttgtggagaaaggtgttagtggctaggtatggtgtggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagatcgtgag 172662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 233
Target Start/End: Complemental strand, 20825025 - 20824816
Alignment:
Q  24 ttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtg 123  Q
    |||||| || ||||| | |||||||||||||||||| |||| ||||||||| |||||||| |||||| |||| || |||||||||||| |  |||||||     
T  20825025 ttctgtgtgcttgaggagggagtatggagggttgggtgttaggaggttgagagagtttaacattgctttgttggggaaatggtgttggaggctgttagtt 20824926  T
Q  124 gagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtggg 223  Q
    ||  | |  | ||||||| ||||||||||| ||||||||||||| |||||||||||  |  |||||||||||||||| ||||||||||  |||||| |||    
T  20824925 gataggggaggtttgtggagtagggtgttgttggctaggtatggcgtggaggatggtggtttggaggatgggggccggagttgttctttgtggtggaggg 20824826  T
Q  224 agatagtgag 233  Q
    |||| |||||    
T  20824825 agattgtgag 20824816  T

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Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 230
Target Start/End: Original strand, 13878908 - 13879107
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 130  Q
    |||||||| | ||||||||| |||||||| |||  ||| |||||  ||||||| |||||| || |||| |||||||||||||| |||||||| ||  | |    
T  13878908 tgtttgaggagggagtatggggggttgggtgttcggagattgagcaagtttaacattgctttgctagggaaatggtgttggcggttgttagttgatagag 13879007  T
Q  131 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 230  Q
    | |  || ||| |||||||||||||||||||||||||||||| ||||||  |  |||||||||||||||  ||||||||||  |||||| ||||||||||    
T  13879008 aggggttatggcgtagggtgttggtggctaggtatggtgtggcggatggtggtttggaggatgggggccagagttgttcttcgtggtggagggagatagt 13879107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 230
Target Start/End: Complemental strand, 25091105 - 25090907
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 130  Q
    |||||||| | ||||||||| || ||||| |||| ||| ||||| |||||||| |||||| ||||||| |||||||||| ||| |||||||| ||  | |    
T  25091105 tgtttgaggagggagtatgg-ggtttgggtgttaggagattgagagagtttaacattgctttgttagggaaatggtgttagcggttgttagttgatagag 25091007  T
Q  131 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 230  Q
    | |  |||||| |||||||||||||||||| ||||||||||| ||||||  |  |||||||||||||||| || |||||||  |||||| ||||||||||    
T  25091006 aggggttgtggcgtagggtgttggtggctatgtatggtgtggcggatggtggtttggaggatgggggccggagctgttcttcgtggtggagggagatagt 25090907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 219
Target Start/End: Complemental strand, 36493089 - 36492912
Alignment:
Q  42 ggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtgg 141  Q
    |||||||||||| ||||||||   ||||||| ||||||||||| ||||  | ||||| |||||||||||||||||||| || ||| |   |  ||| |||    
T  36493089 ggagtatggaggtttgggggtgcggaggttgcgggagtttaatgttgcgttattaggcaaatggtgttggcgtttgttggttgagaggagtagtttatgg 36492990  T
Q  142 tgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 219  Q
    | ||||||||||||||| |||||||||| |||||||||| || ||| || ||||||||| ||  |||||| |||||||    
T  36492989 tatagggtgttggtggcgaggtatggtgaggaggatgggaggttggcggttgggggccggagaggttcttcttggtgg 36492912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 230
Target Start/End: Complemental strand, 17700199 - 17700000
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 130  Q
    |||||||| | |||||||||||||||||| || | ||||||||| |||||||| |||||| |||| || ||||||||||||||  ||||||| ||  | |    
T  17700199 tgtttgaggagggagtatggagggttgggtgtgaggaggttgagagagtttaacattgctttgttggggaaatggtgttggcggctgttagttgataggg 17700100  T
Q  131 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 230  Q
      | ||||||| ||||||||||  ||||||||||||| |||   |||||  |  |||||||||||||||| ||||| ||||   ||||| ||||||||||    
T  17700099 gaggtttgtggagtagggtgttcttggctaggtatggagtgacagatggtggtttggaggatgggggccggagttgctcttcgcggtggagggagatagt 17700000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 163
Target Start/End: Complemental strand, 32267264 - 32267141
Alignment:
Q  40 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgt 139  Q
    ||||||||||||||||||||||||| ||| ||||| |||||||| || ||| |||| ||||||||||||||||| |||||| ||||| | || | |||||    
T  32267264 aaggagtatggagggttgggggttacgagattgagagagtttaacatagctttgttgggtaaatggtgttggcggttgttattggagagggaagctttgt 32267165  T
Q  140 ggtgtagggtgttggtggctaggt 163  Q
    || | | |||||| ||||||||||    
T  32267164 ggagaaaggtgttagtggctaggt 32267141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 151 - 250
Target Start/End: Complemental strand, 38046957 - 38046858
Alignment:
Q  151 ttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgagaatccgggatggggttg 250  Q
    ||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||  || ||| |||||||||| ||||| |||| ||| ||||    
T  38046957 ttggttgctaggtatggtgtggaggatgggaggttggaggatgggggccgaagttgttcttcgtgatggagggagatagttagaattcggggtggtgttg 38046858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 66 - 180
Target Start/End: Complemental strand, 12332532 - 12332418
Alignment:
Q  66 gaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggag-ggtgatgatttgtggtgtagggtgttggtggctaggta 164  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||||| |||| |  | | |||| ||||||||||||||| || ||    
T  12332532 gaggttgagggagtttaatattgcgttgttaggcaaatggtgttggcgtttattagtggagaggtg-tagtctttggtatagggtgttggtggcgagata 12332434  T
Q  165 tggtgtggaggatggg 180  Q
    ||||| ||||||||||    
T  12332433 tggtgaggaggatggg 12332418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 40 - 111
Target Start/End: Complemental strand, 24794456 - 24794385
Alignment:
Q  40 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| ||||||||||||||||||||    
T  24794456 aaggagtctggagggttgggggttaggagattgagggagtttaattttgctttgttaggtaaatggtgttgg 24794385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 180
Target Start/End: Complemental strand, 43271155 - 43271007
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 130  Q
    |||||||| | |||||||||||| ||||| |||| ||||||||| |||||||| ||| | ||  | || |||||||||||||| |||||||  ||    |    
T  43271155 tgtttgaggagggagtatggagg-ttgggtgttaggaggttgagagagtttaacatttccctactggggaaatggtgttggcggttgttagatgatatgg 43271057  T
Q  131 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatggg 180  Q
     || ||||||||||||||||||| |||||||||||||||||| |||||||    
T  43271056 gtggtttgtggtgtagggtgttgatggctaggtatggtgtggcggatggg 43271007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 37434380 - 37434471
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagt 122  Q
    |||||||| | |||||||||||||||||| |||| ||||||||| |||||||| |||||| |||| || ||||||||||||||  |||||||    
T  37434380 tgtttgaggagggagtatggagggttgggtgttaggaggttgagagagtttaacattgctttgttgggaaaatggtgttggcggctgttagt 37434471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 11393777 - 11393849
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||| ||||||||||||||||| | | ||||||||||||||| ||||  ||||||||||||||||||||    
T  11393777 aaaggagtctggagggttgggggttaggtgattgagggagtttaattttgcattgttaggtaaatggtgttgg 11393849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 43249234 - 43249305
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||| ||||||||||||| ||| ||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  43249234 aaaggagtctggagggttgggg-ttaggaggttgagagagtttaattttgctttgttaggtaaatggtgttgg 43249305  T

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Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 38 - 229
Target Start/End: Original strand, 37165549 - 37165740
Alignment:
Q  38 gaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgattt 137  Q
    |||||||| |||| || |||||||| | | |||||| ||| |||||||||||||| ||||| || || |||||| |  ||||||||||  | |  |  ||    
T  37165549 gaaaggagaatgggggtttgggggtgaggcggttgaaggaatttaatattgctctattaggaaagtgatgttggaggatgttagtggatagaggaggctt 37165648  T
Q  138 gtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatag 229  Q
    ||||| ||||||  ||||||| || ||||| | ||||||||||||| |||||| ||||||||| |||  ||||  ||||||| |||||||||    
T  37165649 gtggtatagggtactggtggcgagatatggcgaggaggatgggcggttggaggttgggggccggagtgtttctacttggtggagggagatag 37165740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 230
Target Start/End: Original strand, 42176987 - 42177172
Alignment:
Q  42 ggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtgg 141  Q
    ||||||||||||| || | |||| | ||||||| |||||||| ||| || |||| |  ||||| ||||| || |||||||| ||  | |||| |||||||    
T  42176987 ggagtatggagggatgagtgttagggggttgagagagtttaacattcctttgttggagaaatgatgttgacggttgttagttgatagggatggtttgtgg 42177086  T
Q  142 tgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 230  Q
     ||||||||||||||||||||||   |  ||  |||||  |  ||||||||| |||||||||||||||||  |||||| ||||||||||    
T  42177087 cgtagggtgttggtggctaggta---tcaggcagatggtggtttggaggatgcgggccgaagttgttcttcgtggtggagggagatagt 42177172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 287
Target Start/End: Original strand, 43283248 - 43283350
Alignment:
Q  185 tggaggatgggggccgaagttgttcttgttggtggtgggagatagtgagaatccgggatggggttgaaggtaggagtgatgggtggtttgcgtcgtgtgt 284  Q
    ||||||||||  |||| |||||||||||||||||| ||||||||||||||||  |||||| |||||  | |||   |||| |||||||||| ||||||||    
T  43283248 tggaggatggaagccggagttgttcttgttggtggagggagatagtgagaatttgggatgaggttggtgttagttatgataggtggtttgcttcgtgtgt 43283347  T
Q  285 gtc 287  Q
    |||    
T  43283348 gtc 43283350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 16048333 - 16048417
Alignment:
Q  27 tgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||||  |||||||||||||||||||||||  || |  | ||||||||||||| || ||||| ||||||||||||||||||    
T  16048333 tgtttgtttacgaaaggagtatggagggttggggactaggcagatgagggagtttaacatggctcttttaggtaaatggtgttgg 16048417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 8902537 - 8902398
Alignment:
Q  40 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgt 139  Q
    |||||| | ||||| |||||||||| |||| |||| || |||||| | ||||| ||||| ||||||||||||||  ||||||| ||  | | ||  ||||    
T  8902537 aaggaggaaggaggtttgggggttaggaggatgagagaatttaatctggctctcttaggaaaatggtgttggcggatgttagttgatagagctggcttgt 8902438  T
Q  140 ggtgtagggtgttggtggctaggtatggtgtggaggatgg 179  Q
    ||| ||||||||| |||||| | ||||||| |||||||||    
T  8902437 ggtatagggtgttagtggctcgttatggtgaggaggatgg 8902398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 111
Target Start/End: Complemental strand, 5585412 - 5585328
Alignment:
Q  27 tgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||||| | |||||||||||||| |||| ||| | || ||| ||||| |||||||||||| |  |||||||||||||||||    
T  5585412 tgtttgtttgcgtaaggagtatggaggattggaggtgaggaagttaagggaatttaatattgctttactaggtaaatggtgttgg 5585328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 4310368 - 4310451
Alignment:
Q  136 ttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 219  Q
    ||||||| |||||||||||| ||||| |||| |||   ||||||| || |||||||||||||||| ||| |||||| |||||||    
T  4310368 ttgtggtatagggtgttggttgctagatatgatgttagggatgggaggttggaggatgggggccggagtggttctttttggtgg 4310451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 18187869 - 18187774
Alignment:
Q  27 tgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagt 122  Q
    |||||||||  |||| |||| ||||||||||||||||| |     |||||||||||| | |||| |||||||||||||||||||| | ||||||||    
T  18187869 tgtttgtttaggaaaagagtctggagggttgggggttaggcatacgagggagtttaacactgctttgttaggtaaatggtgttggagattgttagt 18187774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 23942798 - 23942715
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagt 122  Q
    ||||||| ||||||| |||||||| | || ||||| |||||||||| ||||| |  ||||||||||||||||| | ||||||||    
T  23942798 aaaggagcatggaggtttgggggtcaggaagttgaaggagtttaatgttgctttactaggtaaatggtgttggaggttgttagt 23942715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 10530376 - 10530306
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgtt 109  Q
    |||||||||||||||| || | ||||  |||||||| |||||||||||| | |||||||| ||||||||||    
T  10530376 aaaggagtatggagggatgagtgttagtaggttgagagagtttaatattaccctgttaggaaaatggtgtt 10530306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 111
Target Start/End: Complemental strand, 27288797 - 27288715
Alignment:
Q  29 tttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    ||||||||||||||||||||||||| ||| ||||||  ||| ||| ||| ||||||||  || | ||||| ||||||||||||    
T  27288797 tttgtttgagaaaggagtatggaggcttgagggttagaaggatgaaggaatttaatatatctttattaggaaaatggtgttgg 27288715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 113
Target Start/End: Complemental strand, 6245787 - 6245719
Alignment:
Q  45 gtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcg 113  Q
    |||||||||||||||||| | || ||||  |||||||||||  ||| |||||||||||| |||||||||    
T  6245787 gtatggagggttgggggtgaggaagttgcaggagtttaatagcgctttgttaggtaaattgtgttggcg 6245719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 40366343 - 40366287
Alignment:
Q  55 ttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||||| | ||||||||||||||||| | | |||||| |||||||||||||||    
T  40366343 ttgggggttaggcggttgagggagtttaatgtggttctgtttggtaaatggtgttgg 40366287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 14345331 - 14345398
Alignment:
Q  22 tcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgc 89  Q
    |||||| ||||||||||||||||||||| | | ||| |||| | |||||||||| |||||||| ||||    
T  14345331 tcttctatttgtttgagaaaggagtatgaaagtttgagggtgaggaggttgaggaagtttaatgttgc 14345398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 25320522 - 25320450
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    ||||||| |||| ||||||||||||| | |||| || ||||||||| || || |||| || ||||||||||||    
T  25320522 aaaggaggatggggggttgggggttaggcggttaagagagtttaatttttctttgttgggaaaatggtgttgg 25320450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 3e-51; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 35 - 233
Target Start/End: Original strand, 23642016 - 23642214
Alignment:
Q  35 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 134  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| ||||||||||||||| | |||||| ||||| | ||||     
T  23642016 tgaggaaggagtatggagggttgggggttaagaggttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagagggatgc 23642115  T
Q  135 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    ||||||| | | |||||| ||||||||||||||||||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  23642116 tttgtggagaaaggtgttagtggctaggtatggtgtggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 23642214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 35 - 233
Target Start/End: Original strand, 23647674 - 23647872
Alignment:
Q  35 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 134  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| | ||||||||||||| | |||||| ||||| | ||||     
T  23647674 tgaggaaggagtatggagggttgggggttaagaggttgagggagtttaacattgctttgttggataaatggtgttggaggttgttattggagagggatgc 23647773  T
Q  135 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    ||||||| | | |||||| ||||||||||||||||||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  23647774 tttgtggagaaaggtgttagtggctaggtatggtgtggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 23647872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 31 - 230
Target Start/End: Original strand, 55725127 - 55725326
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 130  Q
    |||||||| | |||||||||||||||||| |||| ||||||||| ||||||||  ||||| ||||||| |||||||||||| | |||||||| ||  | |    
T  55725127 tgtttgaggagggagtatggagggttgggtgttaggaggttgagagagtttaactttgctttgttagggaaatggtgttggaggttgttagtagatagag 55725226  T
Q  131 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 230  Q
    |||  || |||| ||||||||||||||||||||||||||||||||||||  |  |||||||||||||||| |||||||||| ||||||| ||||||||||    
T  55725227 atggattatggtatagggtgttggtggctaggtatggtgtggaggatggtggtttggaggatgggggccggagttgttcttcttggtggagggagatagt 55725326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 35 - 233
Target Start/End: Complemental strand, 47419519 - 47419321
Alignment:
Q  35 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 134  Q
    |||| ||||||| ||||||||||||||||  |||| ||||||||||||| |||||| |||||||||||||||||||| | |||||  ||||| | ||||     
T  47419519 tgaggaaggagtttggagggttgggggttcagaggctgagggagtttaacattgctttgttaggtaaatggtgttggaggttgttgttggagagggatgc 47419420  T
Q  135 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    ||||||| | | |||||| ||||||||||||||||||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  47419419 tttgtggagaaaggtgttagtggctaggtatggtgtggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 47419321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 35 - 233
Target Start/End: Original strand, 1827965 - 1828163
Alignment:
Q  35 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 134  Q
    |||| ||||||||||||||  ||||||||| ||||||||| |||||||| ||| || |||| | ||||||||||||||| |||||| |||||   ||||     
T  1827965 tgaggaaggagtatggaggactgggggttacgaggttgagagagtttaacatttctttgttggataaatggtgttggcggttgttattggagaaggatgt 1828064  T
Q  135 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    ||||||| | | |||||| ||||||||||||||||||||||||||  |  ||| |||||||||||| |||||||||| ||||||| |||||||||||||    
T  1828065 tttgtggaggaaggtgttagtggctaggtatggtgtggaggatggaggtttggcggatgggggccggagttgttcttcttggtggcgggagatagtgag 1828163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 35 - 233
Target Start/End: Complemental strand, 19755982 - 19755784
Alignment:
Q  35 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 134  Q
    |||| |||||||||||||||||||| ||||  |||||||| |||||||| |||||| |||| | ||||||||||||||| |||||| ||||| | || |     
T  19755982 tgaggaaggagtatggagggttgggtgttacaaggttgagagagtttaacattgctttgttggataaatggtgttggcggttgttattggagagggaagc 19755883  T
Q  135 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    ||||||| | | |||||| ||||||||||||||||||| ||||||  |  |||||||||||||||| ||||||||||  |||||| |||||||||||||    
T  19755882 tttgtggaggaaggtgttagtggctaggtatggtgtggcggatggaggtttggaggatgggggccggagttgttcttcgtggtggagggagatagtgag 19755784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 35 - 233
Target Start/End: Original strand, 19783824 - 19784022
Alignment:
Q  35 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 134  Q
    |||| |||||||||||||||||||| ||||  |||||||| |||||||| |||||| |||| | ||||||||||||||| |||||| ||||| | || |     
T  19783824 tgaggaaggagtatggagggttgggtgttacaaggttgagagagtttaacattgctttgttggataaatggtgttggcggttgttattggagagggaagc 19783923  T
Q  135 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    ||||||| | | |||||| ||||||||||||||||||| ||||||  |  |||||||||||||||| ||||||||||  |||||| |||||||||||||    
T  19783924 tttgtggaggaaggtgttagtggctaggtatggtgtggcggatggaggtttggaggatgggggccggagttgttcttcgtggtggagggagatagtgag 19784022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 35 - 233
Target Start/End: Complemental strand, 15740935 - 15740737
Alignment:
Q  35 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 134  Q
    |||| ||||||||||||||||||||||| | ||||||||  |||||||| |||||| |||| |||||||||||||  || |||||| |||||   || |     
T  15740935 tgaggaaggagtatggagggttgggggtaacgaggttgacagagtttaacattgctttgttgggtaaatggtgtttacggttgttattggagaaggaagt 15740836  T
Q  135 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    ||||||| | | |||||| ||||||||||||||||||||||||||  |  ||| |||||||||||| ||||||||||  |||||| |||||||||||||    
T  15740835 tttgtggagaaaggtgttagtggctaggtatggtgtggaggatggaggtttggcggatgggggccggagttgttcttcatggtggcgggagatagtgag 15740737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 31 - 230
Target Start/End: Complemental strand, 48312813 - 48312614
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 130  Q
    |||||||| | ||||||||| |||||||| |||  ||| ||||| |||||||| |||||| || |||| |||||||||| ||| |||||||| ||  | |    
T  48312813 tgtttgaggagggagtatggggggttgggtgttcggagattgagagagtttaacattgctttgctagggaaatggtgttagcggttgttagttgatagag 48312714  T
Q  131 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 230  Q
    | |  |||||| |||||||||||||||||||||||||||||| ||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||||||    
T  48312713 aggggttgtggcgtagggtgttggtggctaggtatggtgtggcggatggtggtttggaggatgggggccggagttgttcttcgtggtggagggagatagt 48312614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 31 - 233
Target Start/End: Complemental strand, 46146396 - 46146194
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 130  Q
    |||||||| |||||||| |||||| |||| |||| ||| ||||||| |||||| |||||| ||||||| |||||||||||  | |||||||| ||| | |    
T  46146396 tgtttgaggaaggagtacggagggatgggtgttaggagattgagggggtttaacattgctttgttaggaaaatggtgttgaaggttgttagtagagagag 46146297  T
Q  131 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 230  Q
    |||  |||||| ||||||||||||||||||| |||||||  | ||||||  |  ||||| |||||||||| |||||||| | ||||||| ||||||||||    
T  46146296 atgggttgtggcgtagggtgttggtggctagatatggtgcagcggatggtggtttggagaatgggggccggagttgttcatcttggtggcgggagatagt 46146197  T
Q  231 gag 233  Q
    |||    
T  46146196 gag 46146194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 232
Target Start/End: Original strand, 5789494 - 5789714
Alignment:
Q  12 aatgagatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||| |||| |||| | |||||| | | |||||||| ||||||||| | || ||||||||||||||||||| |  || |||| || || |||||||||    
T  5789494 aatgaggtggttttctctatgtttgcggagggagtatgaagggttgggagataggaggttgagggagtttaatgtcactttgttgggaaagtggtgttgg 5789593  T
Q  112 cgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttctt 211  Q
     | |||||||| ||| |||| |  |||||| ||| |||||| |||||||||||||||||||||| |||  |  |||||||||||||||| ||||||||||    
T  5789594 aggttgttagtagagagtgaagggttgtggcgtaaggtgttagtggctaggtatggtgtggagggtggaggtttggaggatgggggccggagttgttctt 5789693  T
Q  212 gttggtggtgggagatagtga 232  Q
     ||||||| ||||||| ||||    
T  5789694 cttggtggcgggagattgtga 5789714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 230
Target Start/End: Original strand, 11586627 - 11586818
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttg 138  Q
    |||||| ||| ||||| |||  |||| |||||| || ||||||| || ||| |||||||| |||||||||||||| |||||||| ||    || |  |||    
T  11586627 aaaggaatatagagggatggatgttaggaggttaagagagtttattactgccctgttaggaaaatggtgttggcggttgttagttgataaggaagggttg 11586726  T
Q  139 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 230  Q
    ||||||| |||||| ||||||||||||||||||| ||||||  |  ||||| ||||||||||||||||||||| ||||||| ||||||||||    
T  11586727 tggtgtaaggtgttagtggctaggtatggtgtggcggatggaggtttggagaatgggggccgaagttgttcttcttggtggagggagatagt 11586818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 31 - 230
Target Start/End: Original strand, 54482580 - 54482779
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 130  Q
    |||||||| | ||||||||| ||| |||| |||  ||| ||||| |||||||| |||||| || |||| |||||||||||||| |||||||| ||  | |    
T  54482580 tgtttgaggagggagtatggggggctgggtgttcggagattgagcgagtttaacattgctttgctagggaaatggtgttggcggttgttagttgatagag 54482679  T
Q  131 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 230  Q
    | |  || ||| ||||||||||||||||||||||||||||||  |||||  |  ||||||||||||| || ||||||||||  |||||| ||||||||||    
T  54482680 aggggttatggcgtagggtgttggtggctaggtatggtgtggcagatggtggtttggaggatgggggtcggagttgttcttcgtggtggagggagatagt 54482779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 42952935 - 42953006
Alignment:
Q  40 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| ||||||||||||||||||||    
T  42952935 aaggagtctggagggttgggggttaggagattgagggagtttaattttgctttgttaggtaaatggtgttgg 42953006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 219
Target Start/End: Complemental strand, 7099193 - 7099013
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttg 138  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||   ||  |||| || || | ||||||| |||||||||| ||  | || | ||||    
T  7099193 aaaggagtatggaggtttgggtgttaggcagttgagggagtttaatgaggcgttgttgggaaagttgtgttggagtttgttagttgatcgagagggtttg 7099094  T
Q  139 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 219  Q
    |||| | |||| ||| | ||||| ||||||| |||||||| | || |||||||||||||||| ||| |||||  |||||||    
T  7099093 tggtatcgggttttgatagctagatatggtgaggaggatgagaggttggaggatgggggccggagtggttctatttggtgg 7099013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 112
Target Start/End: Original strand, 43516178 - 43516250
Alignment:
Q  40 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggc 112  Q
    ||||||||||||||||||||||| | || ||||  ||| ||||||| |||| |||||||||||||||||||||    
T  43516178 aaggagtatggagggttgggggtgaggaagttgcaggaatttaatagtgctttgttaggtaaatggtgttggc 43516250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 125
Target Start/End: Complemental strand, 19115147 - 19115061
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgga 125  Q
    |||||||| ||||||||| |||||||    ||||| |||||||||||||||| | ||||| |||||||||||| | |||||||||||    
T  19115147 aaaggagtttggagggttaggggttagacagttgaaggagtttaatattgctttattagggaaatggtgttggaggttgttagtgga 19115061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 125
Target Start/End: Complemental strand, 26694639 - 26694553
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgga 125  Q
    |||| |||||||||| |||||||| | ||| |||| |||||||||||||||| |  ||||||||||||||||| |  ||||||||||    
T  26694639 aaagaagtatggaggtttgggggtgaggagattgaaggagtttaatattgctttactaggtaaatggtgttggaggatgttagtgga 26694553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 51072132 - 51072194
Alignment:
Q  49 ggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    ||||| |||||||| | |||| |||||||||||||| ||||||||||||| ||||||||||||    
T  51072132 ggaggtttgggggtcaggaggatgagggagtttaatgttgctctgttagggaaatggtgttgg 51072194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 152
Target Start/End: Original strand, 19733402 - 19733523
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 130  Q
    |||||||| |||||||| | |||| |||| |||| ||| |||||||||||||| | || | ||||||| |||||||||||| | |||||| | ||| | |    
T  19733402 tgtttgaggaaggagtacgaagggatgggtgttaggagattgagggagtttaacactgttttgttaggaaaatggtgttggaggttgttaatagagagag 19733501  T
Q  131 atgatttgtggtgtagggtgtt 152  Q
    |||  |||||| ||||||||||    
T  19733502 atgggttgtggcgtagggtgtt 19733523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 19162703 - 19162786
Alignment:
Q  136 ttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 219  Q
    ||||||| |||||||||||| ||||| ||||||||   ||| ||| || |||||||||||||||| ||| |||||| |||||||    
T  19162703 ttgtggtatagggtgttggttgctagatatggtgttagggacgggaggttggaggatgggggccggagtggttctttttggtgg 19162786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 19735311 - 19735358
Alignment:
Q  186 ggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    ||||||||||||||| |||||||||| ||||||| |||||||||||||    
T  19735311 ggaggatgggggccggagttgttcttcttggtggcgggagatagtgag 19735358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 225
Target Start/End: Complemental strand, 8935785 - 8935599
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttg 138  Q
    |||||||| ||||||||| |||||||    ||||| |||||||||||||||  |  |||| |||||||||||| |  ||||||||||  | | || |||     
T  8935785 aaaggagtttggagggttaggggttagacagttgaaggagtttaatattgccttactagggaaatggtgttggaggatgttagtggataggggtggtttt 8935686  T
Q  139 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggag 225  Q
    |||| ||| || || || ||| | ||||| | || |  |||| || |||||||||||||||| |||||||||| ||||||| |||||    
T  8935685 tggtatagagttttagtcgctcgttatggcgaggtgtgtgggaggttggaggatgggggccggagttgttcttcttggtggcgggag 8935599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 25136125 - 25136067
Alignment:
Q  29 tttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatatt 87  Q
    ||||||||| ||||||| ||||||| ||||| || | ||||||||||||||||||||||    
T  25136125 tttgtttgaaaaaggagaatggaggtttgggtgtgaagaggttgagggagtttaatatt 25136067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 229
Target Start/End: Complemental strand, 36183151 - 36183058
Alignment:
Q  136 ttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatag 229  Q
    ||||||| ||||||  | ||||| || ||||||| ||||||||||||| |||||| ||||||||| |||  ||||  ||||||| |||||||||    
T  36183151 ttgtggtatagggtacttgtggcaagatatggtgaggaggatgggcggttggaggttgggggccggagtgtttctacttggtggagggagatag 36183058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 198
Target Start/End: Complemental strand, 38296390 - 38296258
Alignment:
Q  66 gaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga-tttgtggtgtagggtgttggtggctaggta 164  Q
    |||||||||||||||||||   ||  | ||||| |||||||||||||| || ||||||||| | || || ||| |||| ||||||||||||||| || ||    
T  38296390 gaggttgagggagtttaatgaggcgttattagggaaatggtgttggcggttattagtggagag-gaggagtttttggtatagggtgttggtggcgagata 38296292  T
Q  165 tggtgtggaggatgggcggctggaggatgggggc 198  Q
    ||||| || | ||||| || |||||| |||||||    
T  38296291 tggtgaggtgaatgggaggttggaggttgggggc 38296258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 167
Target Start/End: Original strand, 7662737 - 7662865
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttg 138  Q
    ||||||| ||||||| |||||||| |    ||||| ||| ||||||| |||| ||||||||||||||||||||||  |||| |||||  | | || ||||    
T  7662737 aaaggagaatggaggtttgggggtgagacagttgaaggaatttaatagtgctttgttaggtaaatggtgttggcggatgttggtggacagaggtggtttg 7662836  T
Q  139 tggtgtagggtgttggtggctaggtatgg 167  Q
    |||| ||| || || || |||||||||||    
T  7662837 tggtatagtgtcttagttgctaggtatgg 7662865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 23657862 - 23657822
Alignment:
Q  185 tggaggatgggggccgaagttgttcttgttggtggtgggag 225  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  23657862 tggaggatgggggccgaagttgttcttcttggtggcgggag 23657822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 110
Target Start/End: Complemental strand, 13841829 - 13841794
Alignment:
Q  75 ggagtttaatattgctctgttaggtaaatggtgttg 110  Q
    |||||||||||||||||| |||||||||||||||||    
T  13841829 ggagtttaatattgctcttttaggtaaatggtgttg 13841794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 23872892 - 23872979
Alignment:
Q  26 ctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcg 113  Q
    |||||||||| | |||||||||||| || ||||||||   ||  |||| |||||||||| | ||| ||||||| ||||||||||||||    
T  23872892 ctgtttgtttaaaaaaggagtatggcggtttgggggtacggaaattgaaggagtttaatttagctttgttaggaaaatggtgttggcg 23872979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 40688680 - 40688597
Alignment:
Q  136 ttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 219  Q
    ||||||| | |||||||||| | ||| ||||||||   ||||||| || |||||||||||||||| ||| |||||| |||||||    
T  40688680 ttgtggtatcgggtgttggttggtagatatggtgttagggatgggaggttggaggatgggggccggagtggttctttttggtgg 40688597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 5633850 - 5633947
Alignment:
Q  25 tctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagt 122  Q
    |||||||||||||||||||||  |||||| |||| ||| | |||  | || |||||||||| |||  | |||||||| ||||||||| | ||||||||    
T  5633850 tctgtttgtttgagaaaggaggttggaggtttggaggtaaggagaattagtgagtttaatagtgcattattaggtaagtggtgttggagattgttagt 5633947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 48805682 - 48805617
Alignment:
Q  46 tatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||| |||||| | | |||| |||| ||||||||||||||||| |||||||| | |||||||    
T  48805682 tatggaggtttggggctgaggaggatgagagagtttaatattgctctattaggtaagttgtgttgg 48805617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 19162595 - 19162651
Alignment:
Q  28 gtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaat 84  Q
    |||||| |||||||||||||||| || || || |||| | |||||||||||||||||    
T  19162595 gtttgtatgagaaaggagtatggtggtttaggagttaggcggttgagggagtttaat 19162651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 29122839 - 29122914
Alignment:
Q  29 tttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatgg 105  Q
    ||||||||| ||||||| |||| ||||||||| |||  |||||| |||||||||||||| || | ||||| ||||||    
T  29122839 tttgtttgaaaaaggagaatggggggttgggg-ttaaaaggttgcgggagtttaatatttctttattagggaaatgg 29122914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 54685213 - 54685161
Alignment:
Q  147 ggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggcc 199  Q
    ||||||||| |||||||||||||||   |||||| || |||||||||||||||    
T  54685213 ggtgttggttgctaggtatggtgtgcgtgatgggaggttggaggatgggggcc 54685161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 3e-51; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 35 - 233
Target Start/End: Complemental strand, 2364992 - 2364794
Alignment:
Q  35 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 134  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| ||||||||||||||| | |||||| ||||| | ||||     
T  2364992 tgaggaaggagtatggagggttgggggttaagaggttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagagggatgc 2364893  T
Q  135 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    ||||||| | | |||||| ||||||||||||||||||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  2364892 tttgtggagaaaggtgttagtggctaggtatggtgtggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 2364794  T

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Target: chr3; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 35 - 233
Target Start/End: Original strand, 34332240 - 34332438
Alignment:
Q  35 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 134  Q
    |||| ||||||||||||||||||||||||| ||||||||| |||||||| |||||| |||| ||||||||||||||||| |||||| ||||| | || |     
T  34332240 tgaggaaggagtatggagggttgggggttacgaggttgagagagtttaacattgctttgttgggtaaatggtgttggcggttgttattggagagggaggc 34332339  T
Q  135 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    ||||||| | | |||||| ||||||||||||||||||| ||||||  |  |||||||||||||| | ||||||||||  |||||| |||||||||||||    
T  34332340 tttgtggagaaaggtgttagtggctaggtatggtgtggcggatggaggtttggaggatgggggcgggagttgttcttcgtggtggagggagatagtgag 34332438  T

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Target: chr3; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 31 - 246
Target Start/End: Original strand, 962584 - 962799
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 130  Q
    |||||||| |||||||| |||||| |||| |||| ||| ||||||||||||||||||||| ||||||| |||||||||||| | |||||||| ||| | |    
T  962584 tgtttgaggaaggagtacggagggatgggtgttaggagtttgagggagtttaatattgctttgttaggaaaatggtgttggaggttgttagtagagagag 962683  T
Q  131 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 230  Q
    |||  |||||| |||||||||| |||||||||||||||| || ||||||  |  ||||||||||||| || |||||||| | ||||||| ||||||||||    
T  962684 atgggttgtggcgtagggtgttagtggctaggtatggtggggcggatggtggtttggaggatgggggtcggagttgttcatcttggtggagggagatagt 962783  T
Q  231 gagaatccgggatggg 246  Q
    ||| ||  ||||||||    
T  962784 gaggattagggatggg 962799  T

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Target: chr3; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 35 - 233
Target Start/End: Original strand, 10322996 - 10323194
Alignment:
Q  35 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 134  Q
    |||| ||||||| ||||||||||||||||| |||| ||||||||||||| |||||| |||| ||||||||||||||| | |||||  ||||| | ||||     
T  10322996 tgaggaaggagtttggagggttgggggttaagaggctgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttgttggagagggatgc 10323095  T
Q  135 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    ||||||| | | |||||| ||||||||||||||||||||||||||  |  |||||||||||||||| |||| |||||  |||||| ||||||| |||||    
T  10323096 tttgtggagaaaggtgttagtggctaggtatggtgtggaggatggcggtttggaggatgggggccggagttattcttcgtggtggagggagattgtgag 10323194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 35 - 233
Target Start/End: Original strand, 19919654 - 19919852
Alignment:
Q  35 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 134  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||  |||| || |||||||||||| | |||||| ||||| | ||||     
T  19919654 tgaggaaggagtatggagggttgggggttaagaggttgagggagtttaacattgccttgttgggcaaatggtgttggaggttgttattggagagggatgc 19919753  T
Q  135 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    ||||||| |   |||||| |||||||||||||||||||||||||   |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  19919754 tttgtggagacaggtgttagtggctaggtatggtgtggaggatgacggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 19919852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 31 - 230
Target Start/End: Complemental strand, 19891396 - 19891197
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 130  Q
    |||||||| | ||||||||||||| |||| |||| ||||||||| ||||||||  ||||  ||||  | |||||||||||||| |||||||| ||  | |    
T  19891396 tgtttgaggagggagtatggagggatgggtgttaggaggttgagagagtttaactttgcattgttgaggaaatggtgttggcgattgttagttgataggg 19891297  T
Q  131 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 230  Q
     || ||||||| ||||||||||||||||||||||||||||||  |||||  |  |||||||||||||||||||||||||||  |||||| ||||||||||    
T  19891296 ttggtttgtggcgtagggtgttggtggctaggtatggtgtggcagatggtggtttggaggatgggggccgaagttgttcttcgtggtggagggagatagt 19891197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 31 - 230
Target Start/End: Original strand, 48569460 - 48569659
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 130  Q
    |||||||| | ||||||||||||| |||| |||| ||| ||||| |||||||| |||||| || |||  |||||||||||||| |||||||| ||  | |    
T  48569460 tgtttgaggagggagtatggagggctgggtgttaggagattgagagagtttaacattgctttgctagagaaatggtgttggcggttgttagttgatagag 48569559  T
Q  131 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 230  Q
    |||  |||||| |||||||||||||||||||||||||||||| ||||||  |  ||||||||||||||||||| |||||||  |||| | ||||||||||    
T  48569560 atgggttgtggcgtagggtgttggtggctaggtatggtgtggcggatggtggtttggaggatgggggccgaagctgttcttcgtggtagagggagatagt 48569659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 33 - 233
Target Start/End: Complemental strand, 3141568 - 3141368
Alignment:
Q  33 tttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgat 132  Q
    |||||| ||||||||| ||||| |||| |||| ||| |||||||||||||| | |||| ||||||| |||||||||||| | |||||||| ||| | |||    
T  3141568 tttgaggaaggagtatagagggatgggtgttaggagattgagggagtttaacactgctttgttaggaaaatggtgttggaggttgttagtagagagagat 3141469  T
Q  133 gatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtga 232  Q
    |  |||||| |||||||||| |||||||||||||||| || ||||||     |||||||||||||||| | |||||| | ||||||| ||||||||||||    
T  3141468 gggttgtggcgtagggtgttagtggctaggtatggtgcggcggatggtgatttggaggatgggggccggaattgttcatcttggtggcgggagatagtga 3141369  T
Q  233 g 233  Q
    |    
T  3141368 g 3141368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 35 - 233
Target Start/End: Complemental strand, 16179662 - 16179464
Alignment:
Q  35 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 134  Q
    |||| |||||||||| ||||||||| |||| ||||||||||||||||||| | ||| |||| || |||||||||||| | |||||||| ||| |||| |     
T  16179662 tgaggaaggagtatgaagggttgggagttaggaggttgagggagtttaatgtcgctttgttggggaaatggtgttggaggttgttagtagagagtgaagg 16179563  T
Q  135 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
     |||||| ||| |||||| ||||| ||||||||||| || | |||  |  |||||||||||||||| |||||||||| ||||||| ||||||| |||||    
T  16179562 gttgtggcgtaaggtgttagtggcgaggtatggtgtagacggtggaggtttggaggatgggggccggagttgttcttcttggtggcgggagattgtgag 16179464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 227
Target Start/End: Original strand, 12341676 - 12341872
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 130  Q
    |||||||| | |||||||||||||||||| || | ||||||||| |||||||| |||||| |||| || ||||||||||||||  ||||||| ||  | |    
T  12341676 tgtttgaggagggagtatggagggttgggtgtgaggaggttgagagagtttaacattgctttgttggggaaatggtgttggcggctgttagttgataggg 12341775  T
Q  131 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagat 227  Q
      | ||||||| ||||||||||| ||||||||||||| |||||||||||  |  |||||||||||||||| ||||| ||||  |||||| |||||||    
T  12341776 gaggtttgtggagtagggtgttgttggctaggtatggcgtggaggatggtggtttggaggatgggggccggagttgctcttcgtggtggagggagat 12341872  T

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Target: chr3; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 49 - 219
Target Start/End: Original strand, 52250564 - 52250733
Alignment:
Q  49 ggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtaggg 148  Q
    ||||||||||| ||   ||||||||||||||||||| ||||  ||||||| |||||||||||||||||||| |||||| | | |  ||| |||| |||||    
T  52250564 ggagggttgggtgtgcggaggttgagggagtttaatgttgcgttgttagggaaatggtgttggcgtttgttggtggagag-ggtagtttatggtataggg 52250662  T
Q  149 tgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 219  Q
    |||||||||| || ||||||| |||||||||| || |||||| ||||||||| ||| |||||| |||||||    
T  52250663 tgttggtggcgagatatggtgaggaggatgggaggttggaggttgggggccggagtggttcttcttggtgg 52250733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 27 - 236
Target Start/End: Original strand, 20531470 - 20531677
Alignment:
Q  27 tgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggag 126  Q
    ||||||| |||| ||||||||||| ||||||||||||| |||||||||  ||||||| |  ||  | || || ||||||||||||||||||||| | ||     
T  20531470 tgtttgtatgaggaaggagtatggtgggttgggggttaggaggttgag--agtttaacaccgcattattggggaaatggtgttggcgtttgttaattgat 20531567  T
Q  127 ggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggaga 226  Q
     | || | ||||||| ||| ||||||||| |||||||||| || |||||||||  |  |||| ||||||||  | |||| ||||| ||||||| ||||||    
T  20531568 agggaaggtttgtggcgtaaggtgttggtagctaggtatgctgcggaggatggaggtttggaagatgggggttggagttattcttcttggtggagggaga 20531667  T
Q  227 tagtgagaat 236  Q
    ||||||||||    
T  20531668 tagtgagaat 20531677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 42 - 198
Target Start/End: Complemental strand, 48930434 - 48930278
Alignment:
Q  42 ggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtgg 141  Q
    ||||| |||||| ||||||||   ||||||||||||||||||||||||  ||||||||||||||||||||||  |||| || ||| |  ||  ||| |||    
T  48930434 ggagtttggaggtttgggggtgcggaggttgagggagtttaatattgcattgttaggtaaatggtgttggcggctgttggtagagaggaatagtttatgg 48930335  T
Q  142 tgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggc 198  Q
    | |||||| |||||||| || ||||||| |||||||||| || |||||| |||||||    
T  48930334 tatagggttttggtggcgagatatggtgaggaggatgggaggttggaggttgggggc 48930278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 21739952 - 21740024
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||| ||||||||||||||| | ||| ||||||||||||||| ||||| ||||||||||||||||||||    
T  21739952 aaaggagtctggagggttgggggtaaggagattgagggagtttaattttgctttgttaggtaaatggtgttgg 21740024  T

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Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 14863895 - 14863966
Alignment:
Q  40 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||  ||||||||||||||||||||    
T  14863895 aaggagtctggagggttgggggttaggagattgagggagtttaattttgcattgttaggtaaatggtgttgg 14863966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 10868314 - 10868242
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||| ||||||||| ||||| | ||| ||||||||||||||| ||||| ||||||||||||||||||||    
T  10868314 aaaggagtctggagggttaggggtaaggagattgagggagtttaattttgctttgttaggtaaatggtgttgg 10868242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 15481187 - 15481259
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    ||||||| ||||||| |||||||||| || ||||| |||||||||||||||| | ||||||||||||||||||    
T  15481187 aaaggagcatggaggtttgggggttaggaagttgaaggagtttaatattgctttattaggtaaatggtgttgg 15481259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 200
Target Start/End: Complemental strand, 31675656 - 31675481
Alignment:
Q  25 tctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgg 124  Q
    |||||||||||  ||||||||||||||||||| ||||| |    |||||||||||||||   |||| ||||||||||||||||||||||  |||| ||||    
T  31675656 tctgtttgtttacgaaaggagtatggagggttaggggtgagacagttgagggagtttaaccatgctttgttaggtaaatggtgttggcgaatgttggtgg 31675557  T
Q  125 agggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccg 200  Q
    |  | | || ||| |||| ||||||| ||||||  || ||||||| |||||  ||| || ||||||  ||||||||    
T  31675556 atagaggtggtttttggtatagggtgctggtggtgagatatggtgaggaggcagggaggttggaggtagggggccg 31675481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 200
Target Start/End: Complemental strand, 6825498 - 6825372
Alignment:
Q  74 gggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtgga 173  Q
    ||||||||||||||||  | ||||| |||||||||||||||||||| || ||| |   |  ||| |||| |||||||||||||||  ||||||||| |||    
T  6825498 gggagtttaatattgcgttattaggcaaatggtgttggcgtttgttggttgagaggagtagtttatggtatagggtgttggtggcgcggtatggtgagga 6825399  T
Q  174 ggatgggcggctggaggatgggggccg 200  Q
    ||||||| || ||| || |||||||||    
T  6825398 ggatgggaggttggcggttgggggccg 6825372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 219
Target Start/End: Original strand, 25024273 - 25024453
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttg 138  Q
    |||||||  |||||||||||| |||| |  |||| ||||||||||| |  |||| | ||| |||||||||||| |  ||||||||||  | |||| |||     
T  25024273 aaaggagcttggagggttgggagttaggcagttgggggagtttaatttatctctttaaggaaaatggtgttggaggatgttagtggatagagatggtttt 25024372  T
Q  139 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 219  Q
    |||| |||||||||||  ||||| ||||||| |||||  ||| || ||| || |||||| || |||||||||| |||||||    
T  25024373 tggtatagggtgttggaagctagatatggtgaggaggcagggaggttggcggttgggggtcggagttgttcttattggtgg 25024453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 34830118 - 34830030
Alignment:
Q  25 tctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcg 113  Q
    |||||||||||  | ||||||||||||||||||||||| | || ||||   || ||||||| |||| ||||||||||||||||||||||    
T  34830118 tctgtttgtttacgtaaggagtatggagggttgggggtgaggaagttgcatgaatttaatagtgctttgttaggtaaatggtgttggcg 34830030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 36709621 - 36709549
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    ||||||| ||||||| |||||||||| || ||||| |||||||||||||||| |  |||||||||||||||||    
T  36709621 aaaggagcatggaggtttgggggttaggaagttgaaggagtttaatattgctttactaggtaaatggtgttgg 36709549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 8130565 - 8130482
Alignment:
Q  136 ttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 219  Q
    ||||||| |||||||||||| |||||||||||||||   |||||| || |||||| ||||||||| ||| |||||| |||||||    
T  8130565 ttgtggtatagggtgttggttgctaggtatggtgtgcgtgatgggaggttggaggttgggggccggagtggttctttttggtgg 8130482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 200
Target Start/End: Original strand, 31920766 - 31920941
Alignment:
Q  25 tctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgg 124  Q
    |||||||||||  ||||||||||||||||||| || || |    |||||||||||||||   |||| ||||||||||||||||||||||  |||| ||||    
T  31920766 tctgtttgtttacgaaaggagtatggagggttaggagtgagacagttgagggagtttaaccatgctttgttaggtaaatggtgttggcgaatgttggtgg 31920865  T
Q  125 agggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccg 200  Q
    |  | | || ||| |||| ||||||| ||||||  || ||||||| |||||  ||| || ||||||  ||||||||    
T  31920866 atagaggtggtttttggtatagggtgctggtggtgagatatggtgaggaggcagggaggttggaggtagggggccg 31920941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 198
Target Start/End: Original strand, 40513154 - 40513312
Alignment:
Q  40 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgt 139  Q
    ||||||||||| || |||||||| | || ||||  ||| ||||||| |||| ||||||||||||||||||||||  |||| |||||  | | || ||| |    
T  40513154 aaggagtatgggggtttgggggtgaggaagttgcaggattttaatagtgctttgttaggtaaatggtgttggcggatgttggtggatagaggtggtttat 40513253  T
Q  140 ggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggc 198  Q
    ||| ||||||  |||| ||| ||||||||| |  || ||||||| |||||| |||||||    
T  40513254 ggtatagggtcctggtagctcggtatggtgagacggctgggcggttggaggttgggggc 40513312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 180
Target Start/End: Complemental strand, 44888599 - 44888474
Alignment:
Q  55 ttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttgg 154  Q
    |||||||| | |||| |||||||||||||| || ||||||||||||||||||||||| | || ||||| ||    | |  | |||||| |||||||||||    
T  44888599 ttgggggtgaggaggatgagggagtttaatgtttctctgttaggtaaatggtgttggaggttattagttgataagggtagtatgtggtatagggtgttgg 44888500  T
Q  155 tggctaggtatggtgtggaggatggg 180  Q
    ||||  | ||||||| ||||||||||    
T  44888499 tggcgcgttatggtgaggaggatggg 44888474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 22734140 - 22734224
Alignment:
Q  27 tgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||||| | |||||||||||||| |||| ||| | || ||| ||||| |||||||||||| |  |||||||||||||||||    
T  22734140 tgtttgtttgcgtaaggagtatggaggattggaggtgaggaagttaagggaatttaatattgctttactaggtaaatggtgttgg 22734224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 23604084 - 23604008
Alignment:
Q  29 tttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatgg 105  Q
    ||||||||| ||||||| |||| |||||||||||||  |||||| |||||||||||||| || | ||||| ||||||    
T  23604084 tttgtttgaaaaaggagaatggggggttgggggttaaaaggttgcgggagtttaatatttctttattagggaaatgg 23604008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 45684887 - 45684815
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||| |||||| |||||||||| | | |||| |||||||||||||||| |  |||||||||||||||||    
T  45684887 aaaggagtttggaggtttgggggttaggcgattgaaggagtttaatattgctttactaggtaaatggtgttgg 45684815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 30166760 - 30166847
Alignment:
Q  26 ctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcg 113  Q
    |||||||||  | ||||||| ||||||| |||||||| | |  ||||| ||| ||||||| |||| ||||||||||||||||||||||    
T  30166760 ctgtttgttccacaaaggagaatggaggtttgggggtgaggcagttgaaggaatttaatagtgctttgttaggtaaatggtgttggcg 30166847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 3271119 - 3271201
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcg 113  Q
    ||||||||||||||| | ||||| ||||| |||| ||| |||| ||||||| || || |||| |||||||||||||| |||||    
T  3271119 tgtttgagaaaggaggagggaggtttgggtgttaggagtttgaaggagttttatcttactctcttaggtaaatggtggtggcg 3271201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 1231653 - 1231725
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    ||||||| |||| ||||||||||||| |||||| || ||||||||| || || |||| || ||||||||||||    
T  1231653 aaaggaggatggggggttgggggttaggaggttaagagagtttaatttttctttgttggggaaatggtgttgg 1231725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 31548073 - 31548017
Alignment:
Q  55 ttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||| | |||| |||||||||||||| || |||||||||| ||||||||||||    
T  31548073 ttgggggtgaggaggatgagggagtttaatgtttctctgttaggaaaatggtgttgg 31548017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 46908100 - 46908171
Alignment:
Q  40 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    ||||||| ||||||||||||||| | | | ||| ||||||||||| ||||| |||||||||| |||| ||||    
T  46908100 aaggagtttggagggttgggggtgaggcgtttgtgggagtttaattttgctttgttaggtaagtggtcttgg 46908171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 180
Target Start/End: Original strand, 17077754 - 17077868
Alignment:
Q  66 gaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtat 165  Q
    |||||||||||||||||| | || | |||| || |||||||||| | | |||||||| ||| | ||||  |||||| ||| |||  |||||||||||||     
T  17077754 gaggttgagggagtttaacactgttttgttgggaaaatggtgttagaggttgttagtagagagagatgggttgtggcgtaaggttctggtggctaggtac 17077853  T
Q  166 ggtgtggaggatggg 180  Q
    || || |||||||||    
T  17077854 ggagtagaggatggg 17077868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 55367321 - 55367249
Alignment:
Q  38 gaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    ||||||||||||| ||||||||||| | || ||||| ||| |||||| ||||  ||||||| ||||||||||||    
T  55367321 gaaaggagtatgg-gggttgggggtgaggaagttgaaggaatttaatcttgcgttgttaggaaaatggtgttgg 55367249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 35273790 - 35273726
Alignment:
Q  47 atggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    ||||||||||||||||||   ||||| | ||||||||| || |||||||||| || |||||||||    
T  35273790 atggagggttgggggttagacggttgggagagtttaatttttctctgttagggaagtggtgttgg 35273726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 42458703 - 42458758
Alignment:
Q  29 tttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaata 85  Q
    ||||||||| ||||||| |||||||||| ||||| |  |||||||||||||||||||    
T  42458703 tttgtttgaaaaaggagaatggagggtt-ggggtgaaaaggttgagggagtttaata 42458758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 42674868 - 42674940
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    ||||||| ||||||| |||| ||| | ||| |||| |||||||||||||| | |  |||||||||||||||||    
T  42674868 aaaggagcatggaggtttggaggtgaggagattgaaggagtttaatattgttttactaggtaaatggtgttgg 42674940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 2e-49; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 31 - 246
Target Start/End: Complemental strand, 33170377 - 33170162
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 130  Q
    |||||||| ||||||||||||||| |||| |||| ||| ||||||||||||||||||||| ||||||| |||||||||||| | |||||||| ||| | |    
T  33170377 tgtttgaggaaggagtatggagggatgggtgttaggagtttgagggagtttaatattgctttgttaggaaaatggtgttggaggttgttagtagagagag 33170278  T
Q  131 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 230  Q
    |||  |||||| |||||||||| |||||||||||||||| || ||||||  |  |||||||||||||||| |||||||| | ||||||| ||||||||||    
T  33170277 atgggttgtggcgtagggtgttagtggctaggtatggtgcggcggatggtggtttggaggatgggggccggagttgttcatcttggtggcgggagatagt 33170178  T
Q  231 gagaatccgggatggg 246  Q
    ||| ||  ||||||||    
T  33170177 gaggattagggatggg 33170162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 35 - 233
Target Start/End: Complemental strand, 42514435 - 42514237
Alignment:
Q  35 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 134  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| ||||||| ||||||| | |||||| | ||| | ||||     
T  42514435 tgaggaaggagtatggagggttgggggttaagaggttgagggagtttaacattgctttgttgggtaaattgtgttggaggttgttattagagagggatgc 42514336  T
Q  135 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    ||||||| | | |||||| ||||||||||||||||||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  42514335 tttgtggagaaaggtgttagtggctaggtatggtgtggaggatggcagtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 42514237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 35 - 233
Target Start/End: Original strand, 27116598 - 27116796
Alignment:
Q  35 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 134  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| ||||||||||||||| | |||||| |||||   ||||     
T  27116598 tgaggaaggagtatggagggttgggggttaagaggttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagcaggatgc 27116697  T
Q  135 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
     |||||| | | |||||| |||||||||||||| |||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  27116698 gttgtggagaaaggtgttagtggctaggtatggcgtggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagatcgtgag 27116796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 35 - 233
Target Start/End: Original strand, 30731739 - 30731937
Alignment:
Q  35 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 134  Q
    |||| |||||||||||||||||||| |||| |||||||||||||||||| |||||| |||| ||||||||||||||| | |||||| ||||| | ||||     
T  30731739 tgaggaaggagtatggagggttgggagttaagaggttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagagggatgc 30731838  T
Q  135 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    ||||||| |   ||| || ||||||||||||||||||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  30731839 tttgtggagacaggtattagtggctaggtatggtgtggaggatggcggtttggaggatgggggccggagttgttcttcatggtggagggagattgtgag 30731937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 32 - 233
Target Start/End: Original strand, 28535098 - 28535298
Alignment:
Q  32 gtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtga 131  Q
    ||||||| ||| ||||||||||||||||||||| ||||||||| ||||||||| | ||| |||| ||||||||||||||||| |||||| |||||   ||    
T  28535098 gtttgaggaagaagtatggagggttgggggttacgaggttgagagagtttaatttagct-tgttgggtaaatggtgttggcggttgttattggagaagga 28535196  T
Q  132 tgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtg 231  Q
     | ||||||| | | |||||||||||||||||||||||||| ||||||  |  |||||||||||||||| ||||||||||  |||||| |||||||||||    
T  28535197 agctttgtggagaaaggtgttggtggctaggtatggtgtggcggatggaggtttggaggatgggggccggagttgttcttcatggtggagggagatagtg 28535296  T
Q  232 ag 233  Q
    ||    
T  28535297 ag 28535298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 35 - 233
Target Start/End: Complemental strand, 42928846 - 42928648
Alignment:
Q  35 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 134  Q
    |||| ||||||||||||||| |||| |||| ||||||||| ||||||||||||||| |||| || || ||||||||||| |||||| | ||  | || |     
T  42928846 tgaggaaggagtatggagggatgggtgttaggaggttgagagagtttaatattgctttgttgggaaagtggtgttggcgattgttaatagatagggaagc 42928747  T
Q  135 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    ||| |||||||||||||||||||||||||||| ||||| ||||||  |  |||||||||||||||| ||||||||||  |||||| || ||||||||||    
T  42928746 tttatggtgtagggtgttggtggctaggtatgatgtggcggatggaggtttggaggatgggggccggagttgttcttcgtggtggaggcagatagtgag 42928648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 32 - 233
Target Start/End: Original strand, 35983213 - 35983414
Alignment:
Q  32 gtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtga 131  Q
    ||||||| ||||||||||||||||||||||||| ||||||||  ||||||||| | ||| |||| | ||||||||||||||| |||||| |||||   ||    
T  35983213 gtttgaggaaggagtatggagggttgggggttacgaggttgaaagagtttaatttagctttgttggataaatggtgttggcggttgttattggagaagga 35983312  T
Q  132 tgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtg 231  Q
     | ||||||| | | ||||||||||||||||||||||| || ||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||    
T  35983313 agctttgtggagaaaggtgttggtggctaggtatggtgaggcggatggaggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtg 35983412  T
Q  232 ag 233  Q
    ||    
T  35983413 ag 35983414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 40 - 233
Target Start/End: Complemental strand, 23239093 - 23238900
Alignment:
Q  40 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgt 139  Q
    ||||||||||||||||||||||||| ||| ||||||||||| || |||||| |||| |||||||||||||| || |||||| ||||| | ||   |||||    
T  23239093 aaggagtatggagggttgggggttacgagattgagggagttcaacattgctttgttgggtaaatggtgttgacggttgttattggagagggaatctttgt 23238994  T
Q  140 ggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    || | | |||||| ||||||||||||||||||| ||||||  |  |||||| ||||||||| |||||||| |  |||||| |||||||||||||    
T  23238993 ggagaaaggtgttagtggctaggtatggtgtggcggatggaggtttggaggttgggggccggagttgttcgtcgtggtggagggagatagtgag 23238900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 24 - 233
Target Start/End: Original strand, 8299596 - 8299805
Alignment:
Q  24 ttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtg 123  Q
    |||||| || ||||| | |||||||||||||||||| |||| ||||||| | |||||||| |||||| |||| || |||||||||||| |  |||||||     
T  8299596 ttctgtgtgcttgaggagggagtatggagggttgggtgttaggaggttgcgagagtttaacattgctttgttggggaaatggtgttggaggctgttagtt 8299695  T
Q  124 gagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtggg 223  Q
    ||  | |  | ||||||| ||||||||||| ||||||||||||| |||||||||||  |  |||||||||||||||| ||||||||||  |||||| |||    
T  8299696 gataggggaggtttgtggagtagggtgttgttggctaggtatggcgtggaggatggtggtttggaggatgggggccggagttgttctttgtggtggaggg 8299795  T
Q  224 agatagtgag 233  Q
    |||| |||||    
T  8299796 agattgtgag 8299805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 211
Target Start/End: Complemental strand, 10780920 - 10780740
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 130  Q
    |||||||| | |||||||||||||||||| || | ||||||||| |||||||| |||||| |||| || ||||||||||||||  ||||||| ||  | |    
T  10780920 tgtttgaggagggagtatggagggttgggtgtgaggaggttgagagagtttaacattgctttgttggggaaatggtgttggcggctgttagttgataggg 10780821  T
Q  131 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttctt 211  Q
      | ||||||| ||||||||||| ||||||||||||| |||| ||||||  |  |||||||||||||||| ||||| ||||    
T  10780820 gaggtttgtggagtagggtgttgttggctaggtatggagtggcggatggtggtttggaggatgggggccggagttgctctt 10780740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 66 - 233
Target Start/End: Complemental strand, 31642195 - 31642028
Alignment:
Q  66 gaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtat 165  Q
    ||||||||| ||||||||| | ||| |||| | ||||||||||||||| |||||| |||||   || | ||||||| | | ||||||||||||||| |||    
T  31642195 gaggttgagagagtttaatttagctttgttggataaatggtgttggcggttgttattggagaaggaagctttgtggagaaaggtgttggtggctagatat 31642096  T
Q  166 ggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    ||||||| ||||||  |  |||||||||||||||| ||||||||||  |||||| |||||||||||||    
T  31642095 ggtgtggcggatggaggtttggaggatgggggccggagttgttcttcatggtggcgggagatagtgag 31642028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 225
Target Start/End: Complemental strand, 27796203 - 27796009
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 130  Q
    |||||||| | ||||||||| |||||||| |||  ||| |||||  ||||||| |||||| || |||| |||||||||||||| |||||||| ||  | |    
T  27796203 tgtttgaggagggagtatggggggttgggtgttcggagattgagcaagtttaacattgctttgctagggaaatggtgttggcggttgttagttgatagag 27796104  T
Q  131 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggag 225  Q
    | |  || ||| |||||||||||||||||||||||||||||| ||||||  |  |||||||||||||||  ||||||||||  |||||| |||||    
T  27796103 aggggttatggcgtagggtgttggtggctaggtatggtgtggcggatggtggtttggaggatgggggccagagttgttcttcgtggtggagggag 27796009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 219
Target Start/End: Complemental strand, 41590804 - 41590627
Alignment:
Q  42 ggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtgg 141  Q
    |||||||||||| ||||||||   ||||||| ||||||||||| ||||  | ||||| |||||||||||||||||||| || ||| |   |  ||| |||    
T  41590804 ggagtatggaggtttgggggtgcggaggttgcgggagtttaatgttgcgttattaggcaaatggtgttggcgtttgttggttgagaggagtactttatgg 41590705  T
Q  142 tgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 219  Q
    | ||||||||||||||| |||||||||| |||||||||| || ||| || ||||||||| ||  |||||| |||||||    
T  41590704 tatagggtgttggtggcgaggtatggtgaggaggatgggaggttggcggttgggggccggagaggttcttcttggtgg 41590627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 180
Target Start/End: Original strand, 27165386 - 27165535
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 130  Q
    |||||||| ||||||||||||||| |||| |||| |||||||||  ||||||| |||||  || | || |||||||||||||| |||||||| ||  | |    
T  27165386 tgtttgaggaaggagtatggagggatgggtgttaggaggttgagaaagtttaacattgcattgctggggaaatggtgttggcggttgttagtagataggg 27165485  T
Q  131 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatggg 180  Q
    | |  |||| | ||| |||||||||||||||||||| |||||||||||||    
T  27165486 aagggttgttgcgtaaggtgttggtggctaggtatgttgtggaggatggg 27165535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 180
Target Start/End: Original strand, 25856853 - 25857009
Alignment:
Q  24 ttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtg 123  Q
    |||||| || ||||| | |||||||||||||||||| |||| ||||||| | |||||||| |||||| |||| || |||||||||| | |  |||||||     
T  25856853 ttctgtgtgcttgaggagggagtatggagggttgggtgttaggaggttgcgagagtttaacattgctttgttggggaaatggtgttagaggctgttagtt 25856952  T
Q  124 gagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatggg 180  Q
    ||  | |  | ||||||| ||||||||||| ||||||||||||| ||||||||||||    
T  25856953 gataggggaggtttgtggagtagggtgttgttggctaggtatggcgtggaggatggg 25857009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 219
Target Start/End: Original strand, 4297741 - 4297918
Alignment:
Q  42 ggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtgg 141  Q
    |||||||||||| ||||||||   ||||||| ||||||||||| ||||  | ||||| ||||||||||||| |||||| || ||| |   |  ||| |||    
T  4297741 ggagtatggaggtttgggggtgcggaggttgcgggagtttaatgttgcgttattaggcaaatggtgttggcatttgttggttgagaggagtagtttatgg 4297840  T
Q  142 tgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 219  Q
    | ||||||||||||||| |||||||||| |||||||||| || ||| || ||||| ||| ||  |||||| |||||||    
T  4297841 tatagggtgttggtggcgaggtatggtgaggaggatgggaggttggcggttggggcccggagaggttcttcttggtgg 4297918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 38358178 - 38358106
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||| |||||| |||||||||| ||| |||| |||||||||||||||| |  |||||||||||||||||    
T  38358178 aaaggagtttggaggtttgggggttaggagattgaaggagtttaatattgctttactaggtaaatggtgttgg 38358106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 125
Target Start/End: Original strand, 35122135 - 35122221
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgga 125  Q
    |||||||| ||||||||||||||||| |||||||||| |||||||| ||||  |  |||| |||||||||||| |  ||||||||||    
T  35122135 aaaggagtctggagggttgggggttaggaggttgaggaagtttaatgttgcattactagggaaatggtgttggaggatgttagtgga 35122221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 217
Target Start/End: Complemental strand, 380611 - 380434
Alignment:
Q  40 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgt 139  Q
    |||||||||||||| |||||||| | |  ||||||||||||||||| ||   |  |||| ||||||||||||||  |||| |||||  | |||| ||| |    
T  380611 aaggagtatggaggtttgggggtcaggcagttgagggagtttaatagtgtcttactaggcaaatggtgttggcggatgttggtggatagagatggtttct 380512  T
Q  140 ggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggt 217  Q
    ||| ||||||| |||  ||  ||||||||| |||||  ||| || |||||| ||||||||| ||| |||||| |||||    
T  380511 ggtatagggtgctggaagcgcggtatggtgaggaggcagggaggttggaggttgggggccggagtggttcttcttggt 380434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 200
Target Start/End: Complemental strand, 476892 - 476763
Alignment:
Q  71 tgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgt 170  Q
    ||||||||||||||| |||| ||||||||||||||||||||||  |||| || ||  | |||| ||| |||| ||||||| |||| || || |||||||     
T  476892 tgagggagtttaatagtgctttgttaggtaaatggtgttggcgaatgttggtagatagagatggtttttggtatagggtgctggtagcgagatatggtga 476793  T
Q  171 ggaggatgggcggctggaggatgggggccg 200  Q
    |||||  ||| || ||||||  ||||||||    
T  476792 ggaggcagggaggttggaggtagggggccg 476763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 22094659 - 22094887
Alignment:
Q  19 tggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgt 118  Q
    ||||||||||||||| |   |||||||| ||||||||| |||||||    ||||| |||||||||||||||| |  |||| || ||||||||| |  |||    
T  22094659 tggtcttctgtttgtctccaaaaggagtttggagggttaggggttagacagttgaaggagtttaatattgctttactagggaagtggtgttggaggatgt 22094758  T
Q  119 tagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtg 218  Q
    |||||||  | | || ||| |||| ||| || || || ||| | ||||| | ||    |||| || |||||||||||||||||||||||||||  |||||    
T  22094759 tagtggataggggtggtttttggtatagagttttagtcgctcgttatggcgaggtttgtgggaggttggaggatgggggccgaagttgttcttcgtggtg 22094858  T
Q  219 gtgggagatagtgagaatccgggatgggg 247  Q
    | ||||| | | ||||||  |||||||||    
T  22094859 gcgggaggtggggagaattagggatgggg 22094887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 27165525 - 27165573
Alignment:
Q  185 tggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    ||||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  27165525 tggaggatgggggccgaagttgttcttcttggtggagggagataatgag 27165573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 36256392 - 36256309
Alignment:
Q  136 ttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 219  Q
    ||||||| |||||||||||| | ||| ||||||||   ||||||| || |||||||||||||||| ||| |||||| |||||||    
T  36256392 ttgtggtatagggtgttggttgttagatatggtgttagggatgggaggttggaggatgggggccggagtggttctttttggtgg 36256309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 12825794 - 12825716
Alignment:
Q  155 tggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    |||||||||||||||||||||||||  |  ||||||||||||| |  ||||||||||  |||||| ||||||| |||||    
T  12825794 tggctaggtatggtgtggaggatggcagtttggaggatgggggtcagagttgttcttcgtggtggagggagattgtgag 12825716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 26262292 - 26262377
Alignment:
Q  26 ctgtttgtttgagaaaggagtatggagggttgggggttatgag-gttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||||| |||||||| |||| ||||||| || ||| ||| | ||||||||||||||| |||| ||||||| ||||||||||||    
T  26262292 ctgtttgtttaagaaaggaatatgaagggttgagg-ttaagagagatgagggagtttaatactgctttgttaggaaaatggtgttgg 26262377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 122
Target Start/End: Original strand, 30509463 - 30509559
Alignment:
Q  26 ctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagt 122  Q
    |||||||||  | ||||||||  |||||||||||||||| || ||||| ||| |||||| | ||| || |||| |||||||||||| | ||||||||    
T  30509463 ctgtttgttctaaaaaggagttaggagggttgggggttaggaagttgaaggaatttaatgtagctttgctagggaaatggtgttggaggttgttagt 30509559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 122
Target Start/End: Original strand, 30549803 - 30549899
Alignment:
Q  26 ctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagt 122  Q
    |||||||||  | ||||||||  |||||||||||||||| || ||||| ||| |||||| | ||| || |||| |||||||||||| | ||||||||    
T  30549803 ctgtttgttctaaaaaggagttaggagggttgggggttaggaagttgaaggaatttaatgtagctttgctagggaaatggtgttggaggttgttagt 30549899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 10486348 - 10486423
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctg-ttaggtaaatggtgttggcg 113  Q
    ||||||||||||||| |||||||| |  | ||||| ||||||||||| |||| || ||||| ||||||||||||||    
T  10486348 aaaggagtatggaggtttgggggtgagaaagttgaaggagtttaatagtgctttgtttagggaaatggtgttggcg 10486423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 34481672 - 34481585
Alignment:
Q  26 ctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcg 113  Q
    |||||||||| | |||||||||||| || |||||||| | ||   ||| ||||||||| || ||| ||||||| ||||||||||||||    
T  34481672 ctgtttgtttaaaaaaggagtatggtggtttgggggtgaggaaagtgaaggagtttaacatagctttgttagggaaatggtgttggcg 34481585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 225
Target Start/End: Original strand, 15862206 - 15862292
Alignment:
Q  139 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggag 225  Q
    |||| |||||||||| | |||||||||||||  |||| ||||||| |||||| ||||||  | |||||||| | ||||||| |||||    
T  15862206 tggtatagggtgttgattgctaggtatggtgaagaggctgggcggttggaggttgggggatggagttgttcgtattggtggagggag 15862292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 41925796 - 41925734
Alignment:
Q  29 tttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctc 91  Q
    ||||||||||||||||||||||||| || ||| ||| |    |||||||||||||||||||||    
T  41925796 tttgtttgagaaaggagtatggaggttttgggattaggccaatgagggagtttaatattgctc 41925734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 225
Target Start/End: Original strand, 42039234 - 42039320
Alignment:
Q  139 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggag 225  Q
    |||| ||||||||||||||| |  ||||||| || || ||||||| |||||||||||||||| |||  || || ||||||| |||||    
T  42039234 tggtatagggtgttggtggcgaaatatggtgaggtggttgggcggttggaggatgggggccggagtgctttttcttggtggagggag 42039320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 111
Target Start/End: Original strand, 26263407 - 26263487
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggtta-tgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    ||||| |||| ||| |||| |||||||||||| | |||| | |||||||||||||| |||| ||||||| ||||||||||||    
T  26263407 tgtttaagaacggaatatgaagggttgggggtaagtgagat-gagggagtttaatactgctttgttaggaaaatggtgttgg 26263487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 38184106 - 38184033
Alignment:
Q  34 ttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtg 107  Q
    ||||| |||||| | ||||| ||||| ||||  ||||||| |||||||||| ||||||| || |||||||||||    
T  38184106 ttgagtaaggaggagggaggtttgggtgttagaaggttgaaggagtttaatcttgctctcttgggtaaatggtg 38184033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 38214251 - 38214324
Alignment:
Q  34 ttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtg 107  Q
    ||||| |||||| | ||||| ||||| ||||  ||||||| |||||||||| ||||||| || |||||||||||    
T  38214251 ttgagtaaggaggagggaggtttgggtgttagaaggttgaaggagtttaatcttgctctcttgggtaaatggtg 38214324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 25856999 - 25857047
Alignment:
Q  185 tggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  25856999 tggaggatgggggccggagttgttctttgtggtggagggagattgtgag 25857047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 7e-49; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 35 - 233
Target Start/End: Complemental strand, 6051318 - 6051120
Alignment:
Q  35 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 134  Q
    |||| ||||||||||||||||||||||||| |||||||| ||||||||| |||||| |||| ||||||||||||||| | |||||| ||||| | ||||     
T  6051318 tgaggaaggagtatggagggttgggggttaagaggttgaaggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagcgggatgc 6051219  T
Q  135 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    ||||||| | | |||||| ||||||||||||||||||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  6051218 tttgtggagaaaggtgttagtggctaggtatggtgtggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 6051120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 35 - 180
Target Start/End: Complemental strand, 35541749 - 35541604
Alignment:
Q  35 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 134  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||||||| |||||| |||| ||||||||||||||| | |||||| ||||| | ||||     
T  35541749 tgaggaagaagtatggagggttgggggttaagaggttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagagggatgc 35541650  T
Q  135 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatggg 180  Q
    ||||||| | | |||||| |||||||||||||||||||||||||||    
T  35541649 tttgtggagaaaggtgttagtggctaggtatggtgtggaggatggg 35541604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 39 - 233
Target Start/End: Original strand, 47622506 - 47622700
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttg 138  Q
    ||||||||||||||||||||  |||| ||||||| | ||||||||||| || |||||||| ||||| ||||| ||||||||||| ||  | || |  ||     
T  47622506 aaaggagtatggagggttggctgttaggaggttgggagagtttaatatagccctgttaggaaaatgatgttgacgtttgttagttgatagggaagggtta 47622605  T
Q  139 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    ||  ||| |||||||||||||||||||||||||| ||||||  |  |||||||| ||||||| |||||||||| ||||||| | |||||||||||    
T  47622606 tgacgtaaggtgttggtggctaggtatggtgtggtggatggaggtttggaggataggggccggagttgttcttcttggtggagagagatagtgag 47622700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 20796368 - 20796296
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||| |||||| |||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  20796368 aaaggagtctggaggattgggggttaggaggttgagggagtttaattttgctttgttaggtaaatggtgttgg 20796296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 49264393 - 49264465
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||  ||| | ||||||||||||||||||||    
T  49264393 aaaggagtctggagggttgggggttaggaggttgagggagtttaactttgttttgttaggtaaatggtgttgg 49264465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 39430988 - 39430916
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||| ||||||||| ||||||| |||||||||||||||||||  |||| |||||||||| |||||||||    
T  39430988 aaaggagtctggagggttaggggttaggaggttgagggagtttaattgtgctttgttaggtaagtggtgttgg 39430916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 45796000 - 45795912
Alignment:
Q  25 tctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcg 113  Q
    |||||||||||  | ||||||||||||||||||||||| | || ||||  ||| ||||||| |||| ||||||||||||||||||||||    
T  45796000 tctgtttgtttacgtaaggagtatggagggttgggggtgaggaagttgcaggaatttaatagtgctttgttaggtaaatggtgttggcg 45795912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 200
Target Start/End: Original strand, 22191227 - 22191372
Alignment:
Q  55 ttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttgg 154  Q
    |||||||| | |||| |||||||||||||| || ||||||||||||||||||||||| | || ||||| ||    | |  | |||||| |||||||||||    
T  22191227 ttgggggtgaggaggatgagggagtttaatgtttctctgttaggtaaatggtgttggaggttattagttgataagggtagtatgtggtatagggtgttgg 22191326  T
Q  155 tggctaggtatggtgtggaggatgggcggctggaggatgggggccg 200  Q
    ||||  | ||||||| |||||||||| || ||| || |||||||||    
T  22191327 tggcgtgttatggtgaggaggatgggaggttggtggttgggggccg 22191372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 167
Target Start/End: Original strand, 32352726 - 32352867
Alignment:
Q  26 ctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgga 125  Q
    |||||||||| | |||||||||||| || |||||||| | ||  |||| |||||||||| | ||| ||||||| ||||||||||||||  |||| |||||    
T  32352726 ctgtttgtttaaaaaaggagtatggcggtttgggggtgaggaaattgaaggagtttaatttagctttgttaggaaaatggtgttggcggatgttggtgga 32352825  T
Q  126 gggtgatgatttgtggtgtagggtgttggtggctaggtatgg 167  Q
      | | || |||||||| |||||| || || |||||||||||    
T  32352826 tagaggtggtttgtggtatagggttttagtcgctaggtatgg 32352867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 48 - 113
Target Start/End: Complemental strand, 45270943 - 45270878
Alignment:
Q  48 tggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcg 113  Q
    |||||| ||||||||   ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  45270943 tggaggtttgggggtgcagaggttgagggagtttaatattgcattgttaggtaaatggtgttggcg 45270878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 198
Target Start/End: Original strand, 13867268 - 13867421
Alignment:
Q  45 gtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgt 144  Q
    ||||||||| |||||||| | || ||||  ||| ||||||| |||| ||||||||||||||||||||||  |||| |||||  | | || ||| |||| |    
T  13867268 gtatggaggtttgggggtgaggaagttgcaggaatttaatagtgctttgttaggtaaatggtgttggcggatgttggtggatagaggtggtttatggtat 13867367  T
Q  145 agggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggc 198  Q
    |||||  |||| ||| ||||||||| |  || ||||||| |||||| |||||||    
T  13867368 agggtcctggtagctcggtatggtgagacggctgggcggttggaggttgggggc 13867421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 200
Target Start/End: Original strand, 3544516 - 3544691
Alignment:
Q  25 tctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgg 124  Q
    |||||||||||   ||||||||||||||||||||| || |    | ||||||||||||||  || | ||||||||||||||||||||||  |||| || |    
T  3544516 tctgtttgtttacaaaaggagtatggagggttgggagtgagatagctgagggagtttaattgtgttttgttaggtaaatggtgttggcgaatgttggtag 3544615  T
Q  125 agggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccg 200  Q
    |  | |||| ||| |||| ||||||| |||| || || ||||||| |||||  ||| || ||||||  ||||||||    
T  3544616 atagagatggtttttggtatagggtgctggtagcgagatatggtgaggaggcagggaggttggaggtagggggccg 3544691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 111
Target Start/End: Original strand, 1248001 - 1248087
Alignment:
Q  25 tctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||||||   |||||||||||| ||||| ||||| | |  ||| ||||||||||||| |||| |||||||||||| |||||||    
T  1248001 tctgtttgtttacaaaaggagtatggggggttaggggtgaggcagttaagggagtttaatagtgctttgttaggtaaatagtgttgg 1248087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 179
Target Start/End: Original strand, 33142652 - 33142782
Alignment:
Q  49 ggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtaggg 148  Q
    ||||| |||||||| | |||| |||| || |||||| | ||||| |||||||||||||||||| | |||||||| ||  | || |  ||||||| |||||    
T  33142652 ggaggattgggggtgaggaggatgagagaatttaatttggctctcttaggtaaatggtgttggaggttgttagttgatagagaaggcttgtggtataggg 33142751  T
Q  149 tgttggtggctaggtatggtgtggaggatgg 179  Q
    ||||||||||  | || |||| |||||||||    
T  33142752 tgttggtggcccgttacggtgaggaggatgg 33142782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 15174746 - 15174791
Alignment:
Q  66 gaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||    
T  15174746 gaggttgagggagtttaatgttgctctgttagggaagtggtgttgg 15174791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 13112717 - 13112789
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    ||||||| |||| ||||||||||||| |||||| || ||||||||| || || |||| || ||||||||||||    
T  13112717 aaaggaggatggggggttgggggttaggaggttaagagagtttaatttttctttgttggggaaatggtgttgg 13112789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 26131946 - 26131910
Alignment:
Q  75 ggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||||| ||||||||||||||||||||||||||    
T  26131946 ggagtttaatgttgctctgttaggtaaatggtgttgg 26131910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 111
Target Start/End: Complemental strand, 3074429 - 3074384
Alignment:
Q  66 gaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||| |||||||||||||| || |||||||||| ||||||||||||    
T  3074429 gaggatgagggagtttaatgtttctctgttaggaaaatggtgttgg 3074384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 111
Target Start/End: Complemental strand, 21405521 - 21405476
Alignment:
Q  66 gaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||| |||||||||||||| || |||||||||| ||||||||||||    
T  21405521 gaggatgagggagtttaatgtttctctgttaggaaaatggtgttgg 21405476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 111
Target Start/End: Complemental strand, 44692104 - 44692059
Alignment:
Q  66 gaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    ||||||||||||||||||||| ||| |||| ||||| |||||||||    
T  44692104 gaggttgagggagtttaatatagctttgtttggtaagtggtgttgg 44692059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 263 - 58
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 130  Q
    |||||||| | |||||||||||||||||| |||| ||||||||| |||||||| |||||| ||||||| |||||||||||| | |||||||| ||  | |    
T  263 tgtttgaggagggagtatggagggttgggtgttaggaggttgagagagtttaacattgctttgttagggaaatggtgttggaggttgttagtagatagag 164  T
Q  131 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 230  Q
    |||  |||||| ||| ||||||||||| |||||||||||||||||||||  |  |||||||||||||||||||||| |||| ||||||| ||||||||||    
T  163 atggattgtggcgtaaggtgttggtggttaggtatggtgtggaggatggtggtttggaggatgggggccgaagttgctcttcttggtggagggagatagt 64  T
Q  231 gagaat 236  Q
     |||||    
T  63 cagaat 58  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 2e-46; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 31 - 229
Target Start/End: Complemental strand, 14440463 - 14440265
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 130  Q
    |||||||| | |||||||||||||||||| |||| ||||||||| |||||||| ||||||||||| |  ||||||||||||||||||||||| ||  | |    
T  14440463 tgtttgaggagggagtatggagggttgggtgttaggaggttgagagagtttaacattgctctgttggtgaaatggtgttggcgtttgttagttgataggg 14440364  T
Q  131 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatag 229  Q
     || ||||||||||||||||||| |||||||||||||| ||| ||||||  |  |||||||||||||||| ||||||||||  |||||| |||||||||    
T  14440363 gtggtttgtggtgtagggtgttgttggctaggtatggtatggcggatggtggtttggaggatgggggccggagttgttcttcgtggtggagggagatag 14440265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 39 - 233
Target Start/End: Complemental strand, 28253431 - 28253237
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttg 138  Q
    ||||||||||||||||||||| || | ||||||||| ||||||||| | || |||||||| ||||||||||||||||||||||||||| | || |  ||     
T  28253431 aaaggagtatggagggttgggtgtaaggaggttgagagagtttaatttagccctgttaggaaaatggtgttggcgtttgttagtggagagggaagggtta 28253332  T
Q  139 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    ||| ||| |||||||  ||||||||||||||||| ||||||  |  |||||||||||||||| |||||||||| ||||||| |||||||||||||    
T  28253331 tggcgtaaggtgttgagggctaggtatggtgtggcggatggaggtttggaggatgggggccggagttgttcttcttggtggagggagatagtgag 28253237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 52 - 287
Target Start/End: Complemental strand, 37445792 - 37445556
Alignment:
Q  52 gggttgggggttatgaggttgagggagtttaatattgctctgttaggt-aaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtg 150  Q
    ||||||||||||| || ||||||||||||||| |  ||| |||| ||  ||||||||||||||| ||||||| ||  ||||||  || ||| ||||||||    
T  37445792 gggttgggggttaggaagttgagggagtttaacaccgctttgttgggggaaatggtgttggcgtctgttagttgatagtgatgggttctggcgtagggtg 37445693  T
Q  151 ttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgagaatccgggatggggttg 250  Q
    ||||||||||||||||||| ||||||  || || |||||||||||||||| ||||||||||  ||||||||||||   |||||||| ||||| ||| |      
T  37445692 ttggtggctaggtatggtgcggaggacaggaggttggaggatgggggccggagttgttcttcgtggtggtgggagtgtgtgagaattcgggacgggataa 37445593  T
Q  251 aaggtaggagtgatgggtggtttgcgtcgtgtgtgtc 287  Q
     ||||||  |||||||||||||| ||  |||||||||    
T  37445592 gaggtagtggtgatgggtggtttacggagtgtgtgtc 37445556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 180
Target Start/End: Complemental strand, 12646240 - 12646091
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 130  Q
    |||||||| | |||||||||||||||||| |||| ||||||||| ||||||||  ||| | ||||||| |||||||||||| | |||||||| ||  | |    
T  12646240 tgtttgaggagggagtatggagggttgggtgttaggaggttgagagagtttaactttgttttgttaggaaaatggtgttggaggttgttagtagatagag 12646141  T
Q  131 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatggg 180  Q
    |||  ||||||| ||||||||||||||||||||| |||||||||||||||    
T  12646140 atggattgtggtatagggtgttggtggctaggtaaggtgtggaggatggg 12646091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 230
Target Start/End: Original strand, 33515628 - 33515827
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 130  Q
    |||||||| | ||||||||| ||| |||| |||| ||| || || |||||||| |||||| || |||| ||||||||||| || |||||||| ||  | |    
T  33515628 tgtttgaggagggagtatggggggctgggtgttaggagattaagagagtttaacattgctttgctagggaaatggtgttgacggttgttagttgatagag 33515727  T
Q  131 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 230  Q
    |||  |||||| |||||||||||||||||||||||||||||| ||||||  |  ||||||||||||| || || |||||||  |||||| ||||||||||    
T  33515728 atgggttgtggcgtagggtgttggtggctaggtatggtgtggcggatggtggtttggaggatgggggtcggagctgttcttcgtggtggagggagatagt 33515827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 43310943 - 43310790
Alignment:
Q  66 gaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtat 165  Q
    ||||||||||||||||||| ||||  ||||||| ||||||||||||||||| || |||||| |   |  |||||||| ||||||||||||||| || |||    
T  43310943 gaggttgagggagtttaatgttgcgttgttaggcaaatggtgttggcgtttattggtggagaggagtagtttgtggtatagggtgttggtggcgagatat 43310844  T
Q  166 ggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 219  Q
    || | |||||||||| || |||||| ||||||||| ||| |||||| |||||||    
T  43310843 ggcgaggaggatgggaggttggaggttgggggccggagtggttcttcttggtgg 43310790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 219
Target Start/End: Complemental strand, 26146895 - 26146746
Alignment:
Q  70 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 169  Q
    ||||||||||||||| ||||  ||||||| |||||||||||||||||||| |||||| |   |  |||||||| ||||||||||||||| || ||||| |    
T  26146895 ttgagggagtttaatgttgcgttgttaggcaaatggtgttggcgtttgttggtggagaggagtagtttgtggtatagggtgttggtggcgagatatggcg 26146796  T
Q  170 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 219  Q
     |||||||||| || |||||| ||||||||| ||| ||| || |||||||    
T  26146795 aggaggatgggaggttggaggttgggggccggagtggttattcttggtgg 26146746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 11233919 - 11233991
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||| ||||||||||||||||| || |||||||||||||||| ||||| ||||||||||||||||||||    
T  11233919 aaaggagtctggagggttgggggttaggaagttgagggagtttaattttgctttgttaggtaaatggtgttgg 11233991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 111
Target Start/End: Original strand, 33583842 - 33583928
Alignment:
Q  25 tctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||||||   |||||||||||||||||||||||| | |  |||||||||||||||||| ||| ||||| ||||||||||||||    
T  33583842 tctgtttgtttacaaaaggagtatggagggttgggggtaaggcagttgagggagtttaatatagctttgttaagtaaatggtgttgg 33583928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 9668435 - 9668507
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||| || |||||||||||||| ||||||||||||||||||  ||||| |||||||||||| |||||||    
T  9668435 aaaggagtctgaagggttgggggttaggaggttgagggagtttaactttgctttgttaggtaaatagtgttgg 9668507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 11197076 - 11196988
Alignment:
Q  25 tctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcg 113  Q
    |||||||||||| | | ||||||||||||||||||||| | |||||||  ||| |||||||  ||| ||||||| ||||||||||||||    
T  11197076 tctgtttgtttgtgtagggagtatggagggttgggggtaaggaggttgcaggaatttaatagcgctttgttaggcaaatggtgttggcg 11196988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 28399979 - 28400051
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||| |||||| |||||||||| | | |||| |||||||||||||||| |  |||||||||||||||||    
T  28399979 aaaggagtttggaggtttgggggttaggcgattgaaggagtttaatattgctttactaggtaaatggtgttgg 28400051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 35488545 - 35488465
Alignment:
Q  42 ggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagt 122  Q
    |||| ||||||| |||||||||| || ||||| |||||||||| ||||| |  ||||||||||||||||| | ||||||||    
T  35488545 ggagcatggaggtttgggggttaggaagttgaaggagtttaatgttgctttactaggtaaatggtgttggaggttgttagt 35488465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 13416285 - 13416202
Alignment:
Q  136 ttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 219  Q
    ||||||| | |||||||||| |||||||||||||||   |||||| || |||||||||||||||| ||| |||||  |||||||    
T  13416285 ttgtggtatcgggtgttggttgctaggtatggtgtgcgtgatgggaggttggaggatgggggccggagtggttctatttggtgg 13416202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 13550841 - 13550718
Alignment:
Q  26 ctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgga 125  Q
    |||||||||| | |||||||| ||| || |||||||| | ||| |||| |||||||||||| ||  ||||||| |||||||||||| | ||||| || ||    
T  13550841 ctgtttgtttaaaaaaggagtgtggcggtttgggggtgaggagattgaaggagtttaatatagcattgttagggaaatggtgttggaggttgttggttga 13550742  T
Q  126 gggtgatgatttgtggtgtagggt 149  Q
      | | ||||||||||| ||||||    
T  13550741 tagaggtgatttgtggtatagggt 13550718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 13551294 - 13551171
Alignment:
Q  26 ctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgga 125  Q
    |||||||||| | |||||||| ||| || |||||||| | ||| |||| |||||||||||| ||  ||||||| |||||||||||| | ||||| || ||    
T  13551294 ctgtttgtttaaaaaaggagtgtggcggtttgggggtgaggagattgaaggagtttaatatagcattgttagggaaatggtgttggaggttgttggttga 13551195  T
Q  126 gggtgatgatttgtggtgtagggt 149  Q
      | | ||||||||||| ||||||    
T  13551194 tagaggtgatttgtggtatagggt 13551171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 225
Target Start/End: Complemental strand, 20004662 - 20004483
Alignment:
Q  47 atggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtag 146  Q
    ||||||| |||||||||| || | ||||||||||||| | |||| ||||||  |||||||||||| |  ||||||| ||  | |  |||||||||| |||    
T  20004662 atggaggtttgggggttaggaagatgagggagtttaacactgctttgttagaaaaatggtgttggaggatgttagttgataggggagatttgtggtatag 20004563  T
Q  147 ggtgttggtggctaggtatggtgtggaggatgggcggctggaggat-gggggccgaagttgttcttgttggtggtgggag 225  Q
    ||| ||||||||| | || |||| ||| |  ||| || |||||||| |||||  | ||||||||||  ||||||||||||    
T  20004562 ggtattggtggctggttacggtgaggatgtagggaggttggaggatggggggttggagttgttcttcgtggtggtgggag 20004483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 180
Target Start/End: Complemental strand, 37437688 - 37437559
Alignment:
Q  52 gggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgt 151  Q
    |||||||||||||  | ||||||||||||||| |  ||| |||| || ||||||||||||||| ||||||| ||  ||||||  || ||| |  | ||||    
T  37437688 gggttgggggttagaaagttgagggagtttaacaccgctttgttggggaaatggtgttggcgtctgttagttgatagtgatgggttctggcgntgagtgt 37437589  T
Q  152 tggtggcta-ggtatggtgtggaggatggg 180  Q
    ||||||||| ||||||||  ||||||||||    
T  37437588 tggtggctagggtatggtacggaggatggg 37437559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 15127057 - 15127102
Alignment:
Q  68 ggttgagggagtttaatattgctctgttaggtaaatggtgttggcg 113  Q
    ||||||||||||||||| ||| | ||||||||||||||||||||||    
T  15127057 ggttgagggagtttaatgttgttatgttaggtaaatggtgttggcg 15127102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 10689238 - 10689178
Alignment:
Q  66 gaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggag 126  Q
    ||||||||||||||||||| ||||  ||||||| || |||||||||||||| || ||||||    
T  10689238 gaggttgagggagtttaatgttgcgttgttaggaaagtggtgttggcgtttattggtggag 10689178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 42051722 - 42051774
Alignment:
Q  61 gttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcg 113  Q
    |||| |||||| ||||| |||||| |||| |||||||||||||||||||||||    
T  42051722 gttaggaggttaagggaatttaatgttgccctgttaggtaaatggtgttggcg 42051774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 43722474 - 43722546
Alignment:
Q  41 aggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcg 113  Q
    |||||| |||||| ||||||||   || | |||||||||||||| ||||  ||||||||||||||||||||||    
T  43722474 aggagtttggaggtttgggggtgcagaagatgagggagtttaatgttgcgttgttaggtaaatggtgttggcg 43722546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 45422244 - 45422157
Alignment:
Q  26 ctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcg 113  Q
    |||||||||  | ||||||| ||||||| |||||||| |    ||||| ||| ||||||| |||| ||||||||||||||||||||||    
T  45422244 ctgtttgttccacaaaggagaatggaggtttgggggtgagacagttgaaggaatttaatagtgctttgttaggtaaatggtgttggcg 45422157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 15018242 - 15018180
Alignment:
Q  185 tggaggatgggggccgaagttgttcttgttggtggtgggagatagtgagaatccgggatgggg 247  Q
    |||||| |||||||||||||||||||| ||||||| ||||| ||| ||| ||  |||||||||    
T  15018242 tggaggttgggggccgaagttgttcttcttggtggcgggaggtagggaggattagggatgggg 15018180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 30504774 - 30504820
Alignment:
Q  73 agggagtttaatattgctctgttaggtaaatggtgttggcgtttgtt 119  Q
    |||||||||||||||||||||||||| || | |||||||| ||||||    
T  30504774 agggagtttaatattgctctgttagggaagtagtgttggcatttgtt 30504820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 36804827 - 36804758
Alignment:
Q  42 ggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||| ||||| |||||||||||| || |||||  ||||||||||||||| |  |||| ||||||||||||    
T  36804827 ggagcatggatggttgggggttaggaagttgaaagagtttaatattgctttactaggaaaatggtgttgg 36804758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 1e-41; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 35 - 233
Target Start/End: Complemental strand, 2554321 - 2554123
Alignment:
Q  35 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 134  Q
    |||| |||||||||||||||||| |||||| ||||||||| |||||||| |||||| |||| ||||||||||||||||  |||||| ||||| | || |     
T  2554321 tgaggaaggagtatggagggttgagggttacgaggttgagagagtttaacattgctttgttgggtaaatggtgttggcagttgttattggagagggaagc 2554222  T
Q  135 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    ||||||| | | |||||| ||||||||||||||||||| ||||||  |  |||||||||||||||| ||||||||||  |||||| |||||||| ||||    
T  2554221 tttgtggagaaaggtgttagtggctaggtatggtgtggcggatggaggtttggaggatgggggccggagttgttcttcgtggtggagggagataatgag 2554123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 31 - 233
Target Start/End: Original strand, 17605755 - 17605957
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 130  Q
    |||||||| | |||||||||||||||||| |||| ||||||||| |||||||| |||||| |||| || |||||||||||| |  ||||||| ||  | |    
T  17605755 tgtttgaggagggagtatggagggttgggtgttaggaggttgagagagtttaacattgctttgttggggaaatggtgttggtggctgttagttgataggg 17605854  T
Q  131 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 230  Q
      | ||||||| ||||||||||| ||||||||||||| |||||||||||  |  |||||||||||||||| |||||||||| || |||| ||||||| ||    
T  17605855 gaggtttgtggagtagggtgttgttggctaggtatggcgtggaggatggtggtttggaggatgggggccggagttgttcttctttgtggagggagattgt 17605954  T
Q  231 gag 233  Q
    |||    
T  17605955 gag 17605957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 39 - 230
Target Start/End: Original strand, 14372420 - 14372611
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttg 138  Q
    ||||||||||||||||||||| ||||  ||||| || ||||||||| | ||  ||||||| ||||||||| ||||||||||||||||| | || |  ||     
T  14372420 aaaggagtatggagggttgggtgttagaaggttaagagagtttaatttagccttgttaggaaaatggtgtaggcgtttgttagtggagagggaagggtta 14372519  T
Q  139 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 230  Q
    ||| ||| |||||||||||||||||||||||||| ||| |   |  |||||||||||||||| |||||||||| ||||||| ||||||||||    
T  14372520 tggcgtaaggtgttggtggctaggtatggtgtggcggacgaaagtttggaggatgggggccggagttgttcttcttggtggagggagatagt 14372611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 31 - 233
Target Start/End: Complemental strand, 13938437 - 13938236
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 130  Q
    |||||||| |||||||| |||||| |||| |||| ||| ||||| |||||||| |||||| ||||| | |||||||||||| | |||||||| ||| | |    
T  13938437 tgtttgaggaaggagtacggagggatgggtgttaggagattgagagagtttaacattgctttgttaagaaaatggtgttggaggttgttagtagagagag 13938338  T
Q  131 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 230  Q
    ||| || |||| |||||||||| |||||||||||||||| || ||||||  |  |||||||||||||||| |||||||| | |||||||  |||||||||    
T  13938337 atggtt-gtggcgtagggtgttagtggctaggtatggtgcggcggatggtggtttggaggatgggggccggagttgttcatcttggtggcaggagatagt 13938239  T
Q  231 gag 233  Q
    |||    
T  13938238 gag 13938236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 179
Target Start/End: Original strand, 24766839 - 24766983
Alignment:
Q  35 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 134  Q
    |||| ||||||||||||||||||||||||| |||||| || ||||||||| ||||| |||||||||||||||||||||| |||||| | ||  | || |     
T  24766839 tgaggaaggagtatggagggttgggggttacgaggttaagagagtttaatgttgctttgttaggtaaatggtgttggcggttgttactagatagggaagc 24766938  T
Q  135 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgg 179  Q
    ||||||| | | |||||||||||||||||||||||||| ||||||    
T  24766939 tttgtggcgaaaggtgttggtggctaggtatggtgtggcggatgg 24766983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 31 - 230
Target Start/End: Original strand, 10576671 - 10576870
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 130  Q
    |||||||| | |||||||||||||||||| |||| ||||||||| |||||||| |||| | |||| || ||||||||||||||  ||||||| ||  | |    
T  10576671 tgtttgaggagggagtatggagggttgggtgttaggaggttgagagagtttaacattgttttgttggggaaatggtgttggcggctgttagttgataggg 10576770  T
Q  131 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 230  Q
      | |||| || ||||||||||| |||||||||||||||||| ||||||  |  |||||||||||||||| ||||| ||||  |||||| ||||||||||    
T  10576771 gaggtttgcggagtagggtgttgttggctaggtatggtgtggcggatggtggtttggaggatgggggccggagttgctcttcgtggtggagggagatagt 10576870  T

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Target: chr6; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 24 - 232
Target Start/End: Original strand, 18681988 - 18682196
Alignment:
Q  24 ttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtg 123  Q
    |||| ||||| |||| |||||||||  |||||||||  ||  |||||||||||| ||||| | |||| ||||||| |||||||||||| | ||||||||     
T  18681988 ttctatttgtatgaggaaggagtataaagggttgggttttcggaggttgagggattttaacactgctttgttaggaaaatggtgttggaggttgttagtt 18682087  T
Q  124 gagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtggg 223  Q
    ||  | || |  || ||||||| |||||||||||| |||||||||  |||||||||  |  |||||||||||||||| |||||||||| ||||||| |||    
T  18682088 gacagagaggggttatggtgtaaggtgttggtggccaggtatggttcggaggatggaggtttggaggatgggggccggagttgttcttcttggtggcggg 18682187  T
Q  224 agatagtga 232  Q
    |||||||||    
T  18682188 agatagtga 18682196  T

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Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 180
Target Start/End: Original strand, 21629543 - 21629692
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgga-gggt 129  Q
    |||||||| | |||||||||||||||||| |||| ||||||||| |||||||| |||||| |||| || |||| |||||||||  ||||||| ||  |||    
T  21629543 tgtttgaggagggagtatggagggttgggtgttaggaggttgagagagtttaacattgctttgttggggaaattgtgttggcggctgttagttgataggt 21629642  T
Q  130 gatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatggg 180  Q
    || | ||||||| ||||||||||| ||||||||||||| ||||||||||||    
T  21629643 ga-ggtttgtggagtagggtgttgttggctaggtatggcgtggaggatggg 21629692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 227
Target Start/End: Original strand, 17577130 - 17577335
Alignment:
Q  24 ttctgtttgtttgagaaaggagtatggagggttgggggttat--gaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttag 121  Q
    |||||| || ||||| | |||| ||||||||||||| |||||  ||||||| | |||||||| |||||| |||| || |||||||||||| |  ||||||    
T  17577130 ttctgtgtgcttgaggagggagcatggagggttgggtgttataggaggttgcgagagtttaacattgctttgttggggaaatggtgttggaggctgttag 17577229  T
Q  122 tggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtg 221  Q
    | ||  | |  | ||||||| ||||||||||| ||||||||||||| ||||||||||   |  |||||||||||||||  ||||||||||  |||||| |    
T  17577230 ttgataggggaggtttgtggagtagggtgttgttggctaggtatggcgtggaggatgatggtttggaggatgggggccagagttgttctttgtggtggag 17577329  T
Q  222 ggagat 227  Q
    ||||||    
T  17577330 ggagat 17577335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 10922140 - 10922067
Alignment:
Q  163 tatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgagaat 236  Q
    |||||||||||||||||  ||||| ||||||||||||| |||||||||| ||||||| ||||||||||||||||    
T  10922140 tatggtgtggaggatggaaggctgaaggatgggggccggagttgttcttcttggtggagggagatagtgagaat 10922067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 33 - 230
Target Start/End: Original strand, 20882456 - 20882653
Alignment:
Q  33 tttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgat 132  Q
    |||||| | ||||||||||||| |||| |||| ||||||||| |||||||| |||||| |||| |  |||||||||||||| |||||||| |   | |||    
T  20882456 tttgaggagggagtatggagggatgggtgttaggaggttgagagagtttaacattgctttgttggagaaatggtgttggcggttgttagttgttagggat 20882555  T
Q  133 gatttgtggtgtagggtgttggtggctaggtat-ggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 230  Q
    | ||||    ||||||||||||| |||||||||  |||||| ||||||  |  |||||||  ||||||| ||||||||||  |||||| ||||||||||    
T  20882556 ggtttgcaacgtagggtgttggtcgctaggtataagtgtggcggatggtggtttggagga-cggggccggagttgttcttcgtggtggagggagatagt 20882653  T

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Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 13086250 - 13086178
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||  ||||||||||||||||| || ||||| |||||||||| ||||| ||||||||||||||||||||    
T  13086250 aaaggaggctggagggttgggggttaggaagttgaaggagtttaatgttgctttgttaggtaaatggtgttgg 13086178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 174
Target Start/End: Original strand, 14843552 - 14843701
Alignment:
Q  25 tctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgg 124  Q
    |||||||||||   ||||||||||||||||||||| || |  | | ||||||||||||||| || | ||||||||||||||||||||||  |||| || |    
T  14843552 tctgtttgtttacaaaaggagtatggagggttgggagtgagaaagctgagggagtttaatagtgatttgttaggtaaatggtgttggcgaatgttggtag 14843651  T
Q  125 agggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggag 174  Q
    |  | |||| ||| |||| ||||||| |||| || || ||||||| ||||    
T  14843652 atagagatggtttttggtatagggtgctggtagcgagatatggtgaggag 14843701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 39 - 180
Target Start/End: Original strand, 15956421 - 15956561
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttg 138  Q
    |||||||||||||||| ||   |||| | ||||||| || ||||||||||| ||||| || ||||||| |||||| |||||| | ||  | ||  | |||    
T  15956421 aaaggagtatggagggatgtttgttaggtggttgagagactttaatattgccctgttgggaaaatggttttggcggttgttaattgatagagaa-agttg 15956519  T
Q  139 tggtgtagggtgttggtggctaggtatggtgtggaggatggg 180  Q
    ||| ||| |||||||||||||||||||||||||| |||||||    
T  15956520 tggcgtaaggtgttggtggctaggtatggtgtggcggatggg 15956561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 17228712 - 17228636
Alignment:
Q  29 tttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatgg 105  Q
    ||||||||| ||||||  ||||||| |||||||| | |||||||||||||||||||||| || ||||||| ||||||    
T  17228712 tttgtttgaaaaaggataatggaggtttgggggtgaagaggttgagggagtttaatatttctttgttagggaaatgg 17228636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 287
Target Start/End: Complemental strand, 5042066 - 5041980
Alignment:
Q  200 gaagttgttcttgttggtggtgggagatagtgagaatccgggatggggttgaaggtaggagtgatgggtggtttgcgtcgtgtgtgtc 287  Q
    |||||| ||||| ||||||| ||||||||||||||||||| |||||||| ||||||||  |||| ||||||||||   ||||||||||    
T  5042066 gaagttattctttttggtggagggagatagtgagaatccgagatggggtagaaggtagtcgtga-gggtggtttgttgcgtgtgtgtc 5041980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 113
Target Start/End: Complemental strand, 34434944 - 34434897
Alignment:
Q  66 gaggttgagggagtttaatattgctctgttaggtaaatggtgttggcg 113  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  34434944 gaggttgagggagtttaatattgcattgttaggtaaatggtgttggcg 34434897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 1104375 - 1104459
Alignment:
Q  38 gaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagt 122  Q
    ||||||| | ||||||||| ||||||| |  | |||||||| |||| | |||| |||||||||||||||||||| ||||||||||    
T  1104375 gaaaggattctggagggtttggggttaggcagatgagggagattaacactgctttgttaggtaaatggtgttggagtttgttagt 1104459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 21549559 - 21549487
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    ||||||| ||||||| |||||||| | ||| |||| |||||||||||||||| |  |||||||||||||||||    
T  21549559 aaaggagcatggaggtttgggggtgaggagattgaaggagtttaatattgctttactaggtaaatggtgttgg 21549487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 15674553 - 15674430
Alignment:
Q  26 ctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgga 125  Q
    |||||||||| | |||||||||||| || ||||||||   ||  |||| |||||||||| | ||| ||||||| ||||||||||||||  |||| |||||    
T  15674553 ctgtttgtttaaaaaaggagtatggcggtttgggggtgcggaaattgaaggagtttaatttagctttgttaggaaaatggtgttggcggatgttggtgga 15674454  T
Q  126 gggtgatgatttgtggtgtagggt 149  Q
      | |||| |||||||| ||||||    
T  15674453 ccgagatggtttgtggtatagggt 15674430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 197
Target Start/End: Complemental strand, 18589011 - 18588902
Alignment:
Q  88 gctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctgg 187  Q
    ||||| || ||||| |||||||||||||||||||| ||  | || |  || |||| | | |||||||||||||| ||||||| |||||| ||| || |||    
T  18589011 gctctattgggtaagtggtgttggcgtttgttagttgatagagacgggttatggtatcgagtgttggtggctagatatggtgaggaggacgggaggttgg 18588912  T
Q  188 aggatggggg 197  Q
    ||||||||||    
T  18588911 aggatggggg 18588902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 200
Target Start/End: Complemental strand, 29056214 - 29056069
Alignment:
Q  55 ttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttgg 154  Q
    |||||||| | |||| |||||||||||||| || |||||||||  |||||||||||| | || ||||| ||    |||  | |||||| |||||||||||    
T  29056214 ttgggggtgaggaggatgagggagtttaatgtttctctgttagaaaaatggtgttggaggttattagtcgataaagatagtatgtggtatagggtgttgg 29056115  T
Q  155 tggctaggtatggtgtggaggatgggcggctggaggatgggggccg 200  Q
    | ||  | ||||||| |||||||||| || ||| || |||||||||    
T  29056114 tagcacgttatggtgaggaggatgggaggttggcggttgggggccg 29056069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 5085601 - 5085641
Alignment:
Q  185 tggaggatgggggccgaagttgttcttgttggtggtgggag 225  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  5085601 tggaggatgggggccgaagttgttcttcttggtggcgggag 5085641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 219
Target Start/End: Complemental strand, 15602927 - 15602855
Alignment:
Q  147 ggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 219  Q
    ||||||||| |||||||||||||||   |||||| || |||||||||||||||| ||| |||||  |||||||    
T  15602927 ggtgttggttgctaggtatggtgtgcgtgatgggaggttggaggatgggggccggagtggttctatttggtgg 15602855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 232
Target Start/End: Complemental strand, 32186393 - 32186201
Alignment:
Q  40 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgt 139  Q
    |||||||||| |||| ||||||| | |  ||| || ||||||||| | ||  |||| | ||||||||||||||  ||||| |||||  | | ||  || |    
T  32186393 aaggagtatgaagggctgggggtgaggcagtttagagagtttaatttagccttgttggataaatggtgttggcagttgttggtggatagaggtgggtttt 32186294  T
Q  140 ggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtga 232  Q
    ||| ||||||||||||||| || ||| ||| || || |||| || |||||| ||||||||| |||  ||||| ||||||| ||||| ||||||    
T  32186293 ggtatagggtgttggtggcgagatatagtgaggtggctgggaggttggaggttgggggccggagtgcttcttcttggtggagggaggtagtga 32186201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 26514335 - 26514245
Alignment:
Q  139 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatag 229  Q
    |||| ||| |||||||||||| ||||||||| |||||  ||| |  |||||| ||||||||| ||| |||||  ||||||| |||||||||    
T  26514335 tggtatagagtgttggtggctcggtatggtgaggaggcagggagtttggaggttgggggccggagtggttctatttggtggagggagatag 26514245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 193
Target Start/End: Original strand, 7956149 - 7956254
Alignment:
Q  88 gctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctgg 187  Q
    |||||||| ||||| || ||||||||| ||||||| ||  | |||| | | |||| | | |||||||||||||| ||||||| |||||| ||| || |||    
T  7956149 gctctgttgggtaagtgatgttggcgtatgttagttgatagagatggtctttggtatcgagtgttggtggctagatatggtgaggaggacgggaggttgg 7956248  T
Q  188 aggatg 193  Q
    ||||||    
T  7956249 aggatg 7956254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 246
Target Start/End: Original strand, 24767004 - 24767065
Alignment:
Q  185 tggaggatgggggccgaagttgttcttgttggtggtgggagatagtgagaatccgggatggg 246  Q
    ||||||||||||| || ||||||||||  |||||| ||||||||||||| ||  ||||||||    
T  24767004 tggaggatgggggtcggagttgttcttcgtggtggagggagatagtgaggattagggatggg 24767065  T

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Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 33805482 - 33805405
Alignment:
Q  48 tggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgga 125  Q
    ||||||||||||||| | || ||||| |||||||||| ||||  || |||| |||||||||||| |  ||||||||||    
T  33805482 tggagggttgggggtcaggaagttgaaggagtttaatgttgcattgctagggaaatggtgttggaggatgttagtgga 33805405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 503107 - 503147
Alignment:
Q  185 tggaggatgggggccgaagttgttcttgttggtggtgggag 225  Q
    |||||||||||||||| |||||||||| ||||||| |||||    
T  503107 tggaggatgggggccggagttgttcttcttggtggcgggag 503147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 8264788 - 8264748
Alignment:
Q  185 tggaggatgggggccgaagttgttcttgttggtggtgggag 225  Q
    |||||||||||||||| |||||||||| ||||||| |||||    
T  8264788 tggaggatgggggccggagttgttcttcttggtggcgggag 8264748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 111
Target Start/End: Complemental strand, 14552073 - 14552041
Alignment:
Q  79 tttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||||||||| ||||||||||||||||||    
T  14552073 tttaatattgctctattaggtaaatggtgttgg 14552041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 15987931 - 15988003
Alignment:
Q  31 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaat 103  Q
    |||||||| ||||| ||| |||| || ||||||| || | ||| ||||||||| |||||| ||||||||||||    
T  15987931 tgtttgagtaaggattattgaggtttaggggttaggaagatgatggagtttaacattgctttgttaggtaaat 15988003  T

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Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 111
Target Start/End: Original strand, 19616348 - 19616380
Alignment:
Q  79 tttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||||||| ||||||||||||||||||||    
T  19616348 tttaatattgctttgttaggtaaatggtgttgg 19616380  T

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Target: scaffold0472 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 40 - 233
Target Start/End: Complemental strand, 3962 - 3769
Alignment:
Q  40 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgt 139  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||| |||||| |||| ||||||||||||||||| |||||| ||||| | |||| |||||    
T  3962 aaggagtatggagggttggaggttacgagattgagggagtttaacattgctttgttgggtaaatggtgttggcggttgttattggagagggatgctttgt 3863  T
Q  140 ggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 233  Q
    || | | |||||| ||||||||||||||||||  ||||||  |  |||||| ||||||||| |||||||| |  |||||| |||||||||||||    
T  3862 ggagaaaggtgttagtggctaggtatggtgtgacggatggaggtttggaggttgggggccggagttgttcgtcgtggtggagggagatagtgag 3769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 167
Target Start/End: Original strand, 3985 - 4113
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttg 138  Q
    ||||||||||||||| |||||||| |    ||||| ||||||||||| |||||||||||| ||||||||||||||  |||| |||||  | |||| ||||    
T  3985 aaaggagtatggaggtttgggggtgagacagttgaaggagtttaatagtgctctgttagggaaatggtgttggcggatgttggtggatagagatggtttg 4084  T
Q  139 tggtgtagggtgttggtggctaggtatgg 167  Q
    |||| |||||| || || || ||||||||    
T  4085 tggtatagggttttagttgccaggtatgg 4113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 180
Target Start/End: Complemental strand, 28455 - 28344
Alignment:
Q  69 gttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggt 168  Q
    ||||||||||||||||  |||  ||||||| |||||||||||||||||||| |||||| |   |  |||||||| ||||||||||||||| || |||||     
T  28455 gttgagggagtttaatgctgcgttgttaggcaaatggtgttggcgtttgttggtggagaggagtagtttgtggtatagggtgttggtggcaagatatggc 28356  T
Q  169 gtggaggatggg 180  Q
    | ||||||||||    
T  28355 gaggaggatggg 28344  T

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Target: scaffold0002 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 327562 - 327692
Alignment:
Q  37 agaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatt 136  Q
    ||||||||||||||||| |||||||| |    ||||| ||||||||||| |||| ||||||| ||||||||||||||  |||| |||||  | |||| ||    
T  327562 agaaaggagtatggaggtttgggggtgagacagttgaaggagtttaatagtgctttgttagggaaatggtgttggcggatgttggtggatagagatggtt 327661  T
Q  137 tgtggtgtagggtgttggtggctaggtatgg 167  Q
    |||||| |||||| || || || ||||||||    
T  327662 tgtggtatagggttttagttgccaggtatgg 327692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 312108 - 312238
Alignment:
Q  37 agaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatt 136  Q
    ||||||||||| ||||| |||||||| |    ||||| ||||||||||| |||| ||||||| ||||||||||||||  |||| |||||  | |||| ||    
T  312108 agaaaggagtacggaggtttgggggtgagacagttgaaggagtttaatagtgctttgttagggaaatggtgttggcggatgttggtggatagagatggtt 312207  T
Q  137 tgtggtgtagggtgttggtggctaggtatgg 167  Q
    |||||| |||||| || || || ||||||||    
T  312208 tgtggtatagggttttagttgccaggtatgg 312238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 174
Target Start/End: Original strand, 34024 - 34173
Alignment:
Q  25 tctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgg 124  Q
    |||||||||||   ||||||||||||||||||||| || |    | ||||||||||||||| |||| ||||||||||| ||||||||||  |||| || |    
T  34024 tctgtttgtttacaaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttaggtaaaaggtgttggcgaatgttggtag 34123  T
Q  125 agggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggag 174  Q
    || | |||| ||| |||| ||||||| |||| || || ||||||| ||||    
T  34124 agagagatggtttttggtatagggtgctggtagcgagatatggtgaggag 34173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 134281 - 134411
Alignment:
Q  37 agaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatt 136  Q
    ||||||||||| ||||| |||||||| |    ||||| ||||||||||| |||| ||||||| ||||||||||||||  |||| |||||  | |||| ||    
T  134281 agaaaggagtacggaggtttgggggtgagacagttgaaggagtttaatagtgctttgttagggaaatggtgttggcggatgttggtggatagagatggtt 134380  T
Q  137 tgtggtgtagggtgttggtggctaggtatgg 167  Q
    |||||| |||||| || || || ||||||||    
T  134381 tgtggtatagggttttagttgccaggtatgg 134411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 119
Target Start/End: Original strand, 715 - 794
Alignment:
Q  40 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgtt 119  Q
    |||||| | ||||| |||||||| | |||| |||||||||||||| ||||||| ||||| || |||||||||||| ||||    
T  715 aaggaggaaggaggtttgggggtcaggaggatgagggagtttaatgttgctctattagggaagtggtgttggcgtatgtt 794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 125
Target Start/End: Complemental strand, 17856 - 17770
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgga 125  Q
    |||||||| ||||||||||||||| | || ||||| |||||||||| ||||  || |||| |||||||||||| |  ||||||||||    
T  17856 aaaggagtttggagggttgggggtcaggaagttgaaggagtttaatgttgcattgctagggaaatggtgttggtggatgttagtgga 17770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 113
Target Start/End: Original strand, 63737 - 63802
Alignment:
Q  48 tggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcg 113  Q
    ||||||||||||||||| |  |||||||||||||||| | ||| || |||| ||||||||||||||    
T  63737 tggagggttgggggttaggcagttgagggagtttaatttagctttgctagggaaatggtgttggcg 63802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 167
Target Start/End: Complemental strand, 8315 - 8187
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttg 138  Q
    ||||||| ||||||| |||||||| |    ||||| ||| ||||||| |||| ||||||||||||||||||||||  |||| |||||  | | || ||||    
T  8315 aaaggagaatggaggtttgggggtgagacagttgaaggaatttaatagtgctttgttaggtaaatggtgttggcggatgttggtggacagaggtggtttg 8216  T
Q  139 tggtgtagggtgttggtggctaggtatgg 167  Q
    |||| ||| || || || |||||||||||    
T  8215 tggtatagtgtcttagttgctaggtatgg 8187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 111
Target Start/End: Original strand, 2993 - 3080
Alignment:
Q  24 ttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    |||||||||||||  ||||||| | |||||||||||||||| |  |||||| |  |||||| || || | ||||||||||||||||||    
T  2993 ttctgtttgtttgccaaaggaggacggagggttgggggttaggcagttgagagcttttaatttttctttattaggtaaatggtgttgg 3080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 12526 - 12464
Alignment:
Q  49 ggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 111  Q
    ||||| || ||||||| | |||||||||||||| || | ||| ||||||||||||||||||||    
T  12526 ggaggtttaggggttaggcggttgagggagtttcatgtggctgtgttaggtaaatggtgttgg 12464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 15090 - 15160
Alignment:
Q  39 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgtt 109  Q
    ||||||| ||||||  |||||||||| || ||||| ||| |||||||||||| |  |||||||||||||||    
T  15090 aaaggagcatggagttttgggggttaggaagttgaaggattttaatattgctttactaggtaaatggtgtt 15160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 67691 - 67606
Alignment:
Q  139 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtggga 224  Q
    |||| |||||||||| |  |||||||||||| |||||  ||| || |||||| ||||||| | ||| |||||| ||||||||||||    
T  67691 tggtatagggtgttgatttctaggtatggtgaggaggcagggaggttggaggttgggggctggagtggttcttcttggtggtggga 67606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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