View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2835_low_5 (Length: 546)

Name: NF2835_low_5
Description: NF2835
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2835_low_5
NF2835_low_5
[»] chr2 (26 HSPs)
chr2 (1-530)||(39903671-39904192)
chr2 (1-115)||(12016700-12016814)
chr2 (1-115)||(16126589-16126703)
chr2 (1-115)||(19228459-19228573)
chr2 (1-116)||(22705488-22705603)
chr2 (5-114)||(27665075-27665184)
chr2 (1-115)||(16919184-16919298)
chr2 (5-114)||(14377462-14377571)
chr2 (14-114)||(4821323-4821423)
chr2 (5-115)||(2060072-2060183)
chr2 (4-100)||(10690819-10690915)
chr2 (1-115)||(13351241-13351356)
chr2 (10-115)||(8770916-8771021)
chr2 (1-114)||(16123312-16123425)
chr2 (1-115)||(26229884-26229997)
chr2 (446-530)||(39923342-39923426)
chr2 (3-115)||(15411652-15411765)
chr2 (4-115)||(9747353-9747465)
chr2 (8-115)||(45062238-45062346)
chr2 (5-71)||(12438723-12438788)
chr2 (5-53)||(43388859-43388907)
chr2 (5-115)||(23932602-23932713)
chr2 (5-73)||(22162149-22162217)
chr2 (59-112)||(35729209-35729262)
chr2 (8-52)||(40562171-40562215)
chr2 (58-114)||(41492164-41492220)
[»] chr7 (26 HSPs)
chr7 (4-115)||(384460-384571)
chr7 (1-115)||(3561908-3562022)
chr7 (1-115)||(39757140-39757254)
chr7 (1-115)||(9331995-9332109)
chr7 (5-114)||(19889378-19889487)
chr7 (5-114)||(5909313-5909422)
chr7 (2-111)||(47120228-47120337)
chr7 (5-114)||(12085962-12086071)
chr7 (12-115)||(18102260-18102364)
chr7 (5-115)||(23982785-23982896)
chr7 (5-71)||(24250351-24250417)
chr7 (5-115)||(36548490-36548600)
chr7 (5-114)||(7170040-7170149)
chr7 (39-115)||(8170593-8170669)
chr7 (5-107)||(47457499-47457602)
chr7 (14-72)||(24699181-24699240)
chr7 (5-114)||(39869160-39869268)
chr7 (5-88)||(19868151-19868235)
chr7 (50-114)||(41331487-41331551)
chr7 (5-115)||(25709429-25709540)
chr7 (71-114)||(24250602-24250645)
chr7 (5-73)||(24463027-24463095)
chr7 (12-83)||(2276719-2276791)
chr7 (5-53)||(8091405-8091453)
chr7 (67-115)||(8594998-8595045)
chr7 (5-53)||(12650858-12650906)
[»] chr6 (19 HSPs)
chr6 (1-115)||(22974603-22974717)
chr6 (1-115)||(23813684-23813798)
chr6 (1-113)||(5362925-5363037)
chr6 (1-115)||(2830711-2830825)
chr6 (1-115)||(31069612-31069726)
chr6 (4-115)||(1017808-1017920)
chr6 (7-115)||(10887068-10887177)
chr6 (5-70)||(3850589-3850654)
chr6 (1-65)||(32615540-32615607)
chr6 (15-115)||(31568157-31568257)
chr6 (7-115)||(6016895-6017004)
chr6 (7-115)||(18332718-18332827)
chr6 (6-107)||(31169801-31169903)
chr6 (11-114)||(17596385-17596488)
chr6 (5-115)||(8977496-8977607)
chr6 (8-77)||(34300403-34300472)
chr6 (8-73)||(17141315-17141381)
chr6 (59-115)||(31503834-31503890)
chr6 (5-53)||(26602523-26602571)
[»] chr5 (21 HSPs)
chr5 (1-115)||(4047446-4047560)
chr5 (1-115)||(9184241-9184355)
chr5 (1-115)||(2795557-2795671)
chr5 (4-115)||(30328357-30328468)
chr5 (1-115)||(34578045-34578159)
chr5 (1-115)||(15190906-15191021)
chr5 (5-110)||(11375997-11376103)
chr5 (9-115)||(41350244-41350350)
chr5 (5-114)||(28629916-28630025)
chr5 (1-115)||(31365980-31366096)
chr5 (5-115)||(12642023-12642133)
chr5 (41-115)||(14466524-14466598)
chr5 (5-114)||(11636769-11636878)
chr5 (5-114)||(8103611-8103720)
chr5 (5-114)||(16174653-16174762)
chr5 (7-115)||(24329665-24329774)
chr5 (5-72)||(5958196-5958264)
chr5 (8-67)||(29538768-29538827)
chr5 (3-73)||(31567563-31567634)
chr5 (1-115)||(10664995-10665109)
chr5 (5-53)||(15241043-15241091)
[»] chr8 (35 HSPs)
chr8 (1-115)||(7140489-7140603)
chr8 (1-115)||(10129137-10129251)
chr8 (3-115)||(9801704-9801816)
chr8 (1-115)||(13327971-13328085)
chr8 (5-114)||(9743899-9744008)
chr8 (8-115)||(18567446-18567553)
chr8 (1-115)||(39701833-39701947)
chr8 (1-115)||(40210851-40210965)
chr8 (5-115)||(8140605-8140715)
chr8 (1-108)||(19343873-19343981)
chr8 (49-114)||(45519593-45519658)
chr8 (5-114)||(38527858-38527971)
chr8 (5-114)||(35678306-35678415)
chr8 (5-115)||(26682105-26682216)
chr8 (4-75)||(45516325-45516395)
chr8 (4-114)||(1203638-1203748)
chr8 (1-75)||(39703487-39703561)
chr8 (5-114)||(14816157-14816266)
chr8 (5-114)||(14829474-14829583)
chr8 (5-114)||(39024888-39024997)
chr8 (5-115)||(8284598-8284710)
chr8 (7-115)||(26834600-26834709)
chr8 (7-115)||(31812152-31812261)
chr8 (63-115)||(31451420-31451472)
chr8 (8-114)||(4084574-4084680)
chr8 (8-114)||(4080425-4080531)
chr8 (8-114)||(4102881-4102987)
chr8 (9-115)||(44091360-44091466)
chr8 (7-88)||(34249716-34249799)
chr8 (5-115)||(6818054-6818165)
chr8 (5-115)||(12132020-12132131)
chr8 (5-73)||(10974626-10974695)
chr8 (3-52)||(35745982-35746031)
chr8 (5-45)||(6850678-6850718)
chr8 (5-53)||(37264538-37264586)
[»] chr3 (29 HSPs)
chr3 (1-115)||(3863363-3863477)
chr3 (1-115)||(16875055-16875169)
chr3 (5-114)||(11610952-11611061)
chr3 (1-114)||(50364224-50364337)
chr3 (1-114)||(13495327-13495441)
chr3 (1-114)||(20938090-20938204)
chr3 (14-114)||(29686367-29686467)
chr3 (1-115)||(32553400-32553514)
chr3 (1-107)||(54621256-54621362)
chr3 (1-77)||(51339252-51339328)
chr3 (5-114)||(40497085-40497194)
chr3 (7-115)||(38389486-38389595)
chr3 (14-115)||(24978693-24978794)
chr3 (5-58)||(30214098-30214150)
chr3 (5-115)||(37055396-37055507)
chr3 (50-115)||(36426439-36426504)
chr3 (51-115)||(23523030-23523094)
chr3 (1-107)||(35094989-35095092)
chr3 (5-115)||(38786354-38786463)
chr3 (5-53)||(46845533-46845581)
chr3 (15-115)||(7940838-7940940)
chr3 (68-114)||(41151734-41151780)
chr3 (159-239)||(53576925-53577007)
chr3 (5-53)||(9710981-9711029)
chr3 (12-115)||(23803076-23803180)
chr3 (5-106)||(26486416-26486515)
chr3 (5-53)||(37444184-37444231)
chr3 (59-115)||(49396472-49396528)
chr3 (9-53)||(53537084-53537128)
[»] chr1 (32 HSPs)
chr1 (1-115)||(313783-313897)
chr1 (1-115)||(44918058-44918172)
chr1 (10-115)||(6570015-6570120)
chr1 (1-115)||(8062238-8062352)
chr1 (14-115)||(30288894-30288995)
chr1 (5-114)||(17919491-17919600)
chr1 (5-114)||(39150358-39150467)
chr1 (3-114)||(39930832-39930943)
chr1 (1-113)||(32716195-32716307)
chr1 (413-516)||(38593826-38593932)
chr1 (15-114)||(52833503-52833602)
chr1 (7-115)||(30171918-30172027)
chr1 (7-115)||(30187459-30187568)
chr1 (5-114)||(6754509-6754618)
chr1 (6-107)||(30363033-30363135)
chr1 (5-114)||(41624867-41624976)
chr1 (60-115)||(10896446-10896501)
chr1 (7-115)||(21854147-21854256)
chr1 (7-115)||(31100963-31101071)
chr1 (63-115)||(44007560-44007612)
chr1 (1-45)||(51382405-51382449)
chr1 (50-107)||(3096292-3096349)
chr1 (15-83)||(9516628-9516697)
chr1 (5-113)||(39627603-39627712)
chr1 (8-115)||(36490819-36490927)
chr1 (21-73)||(43671743-43671795)
chr1 (5-69)||(2222311-2222375)
chr1 (50-115)||(21391929-21391994)
chr1 (5-73)||(23591735-23591804)
chr1 (7-115)||(34802007-34802115)
chr1 (59-115)||(24669019-24669075)
chr1 (59-115)||(52337858-52337914)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-115)||(52809-52923)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-115)||(145711-145825)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-115)||(13119-13233)
[»] chr4 (27 HSPs)
chr4 (1-115)||(48910832-48910946)
chr4 (5-110)||(41415592-41415697)
chr4 (1-115)||(35999977-36000084)
chr4 (1-115)||(29190846-29190960)
chr4 (3-115)||(53961358-53961470)
chr4 (5-114)||(7349726-7349835)
chr4 (3-115)||(4329630-4329742)
chr4 (3-103)||(10389310-10389410)
chr4 (1-115)||(23553603-23553718)
chr4 (7-115)||(16667414-16667523)
chr4 (1-68)||(49228390-49228457)
chr4 (7-115)||(47326922-47327031)
chr4 (7-115)||(47341718-47341827)
chr4 (7-115)||(54495667-54495776)
chr4 (5-110)||(10813529-10813635)
chr4 (37-114)||(23051413-23051490)
chr4 (1-76)||(49650244-49650319)
chr4 (7-115)||(27362430-27362539)
chr4 (5-115)||(49181109-49181220)
chr4 (5-115)||(37784890-37785001)
chr4 (7-115)||(8736841-8736949)
chr4 (14-110)||(39539510-39539607)
chr4 (67-115)||(49228754-49228802)
chr4 (5-87)||(2096908-2096991)
chr4 (1-114)||(34941311-34941425)
chr4 (5-54)||(23438193-23438242)
chr4 (4-115)||(52391334-52391446)
[»] scaffold0155 (1 HSPs)
scaffold0155 (3-115)||(3443-3556)
[»] scaffold0727 (1 HSPs)
scaffold0727 (1-115)||(5724-5839)
[»] scaffold0009 (1 HSPs)
scaffold0009 (8-107)||(43503-43602)
[»] scaffold0018 (1 HSPs)
scaffold0018 (3-115)||(182079-182190)
[»] scaffold0111 (1 HSPs)
scaffold0111 (7-115)||(37144-37253)
[»] scaffold0618 (1 HSPs)
scaffold0618 (9-115)||(8444-8550)
[»] scaffold0036 (1 HSPs)
scaffold0036 (5-115)||(94048-94159)
[»] scaffold0305 (1 HSPs)
scaffold0305 (8-73)||(18068-18134)


Alignment Details
Target: chr2 (Bit Score: 458; Significance: 0; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 458; E-Value: 0
Query Start/End: Original strand, 1 - 530
Target Start/End: Complemental strand, 39904192 - 39903671
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  39904192 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatgtttaatataaaaaacataagttccaagttaaatttacta 39904093  T
Q  101 ctttaaacttcttaaacttcttaacatgatagaaaacccttatttatatttaagagcgttgctatttggtacgggttaaaaacaacgaaaaatgacggga 200  Q
    |||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39904092 ctttaaacttcttaa---------catgatagaaaacccttatttatatttaagagcgttgctatttggtacgggttaaaaacaacgaaaaatgacggga 39904002  T
Q  201 agaagaaacaagctgttacagattttttatttaatattatagtaaattttgacttgtagtggca-tcatgggtaggttttagtgttattcgtcaaatttt 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||     
T  39904001 agaagaaacaagctgttacagattttttatttaatattatagtaaattttgacttgtagtggcaatcatgggtaggttttagtgttattcgtcaaatttc 39903902  T
Q  300 gttggtttgttccgcactatacagtatttccctatatttatacatcnnnnnnngtataaagtatttcccttatcattagtatcactatgacctgacccaa 399  Q
    ||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  39903901 gttggtttgttccgcactatacagtatttccctatatttatacatcaaaaaaagtataaagtatttcccttatcattagtatcactatgacctgacccaa 39903802  T
Q  400 actcacgagttaattttattaggaaagaatcatgagttgttttagctgttgcgaataggatgagtttaaggctgctggaagtggtgaaccatatgttgta 499  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39903801 actcatgagttaattttattaggaaagaatcatgagttgttttagctgttgcgaataggatgagtttaaggctgctggaagtggtgaaccatatgttgta 39903702  T
Q  500 aaaaatctagcaggtaatttgacaagtatat 530  Q
    |||||||||||||||||||||||||||||||    
T  39903701 aaaaatctagcaggtaatttgacaagtatat 39903671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 12016700 - 12016814
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  12016700 aggtaactaaaagtagtaactttttattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaagttccaagttaaaattacta 12016799  T
Q  101 ctttaaacttcttaa 115  Q
    |||||||||||||||    
T  12016800 ctttaaacttcttaa 12016814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 16126703 - 16126589
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||    
T  16126703 aggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaagtttcaagttaaagttacta 16126604  T
Q  101 ctttaaacttcttaa 115  Q
    |||||||||||||||    
T  16126603 ctttaaacttcttaa 16126589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 19228459 - 19228573
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||| ||||||||||| ||| ||||||    
T  19228459 aggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagttacatatttaatacaaaaaacacaagttccaagtcaaagttacta 19228558  T
Q  101 ctttaaacttcttaa 115  Q
    |||||||||||||||    
T  19228559 ctttaaacttcttaa 19228573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 22705488 - 22705603
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||| |||| |||||||||||||||||||||| ||||| ||||||||| ||||||    
T  22705488 aggtaactaaaagtagtaacttttcattgaaaaccaacaattattaatttaaagttacatatttaatataaaaaacacaagtttcaagttaaaattacta 22705587  T
Q  101 ctttaaacttcttaaa 116  Q
    ||||||||||||||||    
T  22705588 ctttaaacttcttaaa 22705603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 27665184 - 27665075
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactacttt 104  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||| ||||||||||| ||| ||||||||||    
T  27665184 aactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaacacaagttccaagtcaaagttactacttt 27665085  T
Q  105 aaacttctta 114  Q
    ||||||||||    
T  27665084 aaacttctta 27665075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 16919298 - 16919184
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||| ||||| ||| ||||||    
T  16919298 aggtaactaaaagtagtaactttttgttgaaaaccaacaattattgattaaaagttacatatttaatataaaaaacacaagtttcaagtcaaagttacta 16919199  T
Q  101 ctttaaacttcttaa 115  Q
    |||||||||| ||||    
T  16919198 ctttaaacttgttaa 16919184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 14377462 - 14377571
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactacttt 104  Q
    |||||||||||||||||||| |||||||| |||||||||||  ||||||| |||||||||||||||||||||| ||||| ||||| ||| ||||||||||    
T  14377462 aactaaaagtagtaactttttattgaaaaccaacaattatttgttaaaagttacatatttaatataaaaaacacaagtttcaagtcaaagttactacttt 14377561  T
Q  105 aaacttctta 114  Q
    ||||||||||    
T  14377562 aaacttctta 14377571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 14 - 114
Target Start/End: Original strand, 4821323 - 4821423
Alignment:
Q  14 tagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactactttaaacttctt 113  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||| ||| | ||| |||||||||||||||||||    
T  4821323 tagtaacttttcattgaaaaccaacaattatttattaaaagctacatatttaatataaaaaacacaagtttcaaatcaaagttactactttaaacttctt 4821422  T
Q  114 a 114  Q
    |    
T  4821423 a 4821423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 2060183 - 2060072
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaa-agctacatatttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    ||||||||||| |||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||| || |||||||||||| |||||||||    
T  2060183 aactaaaagtaataacttttcattaaaaatcaacaattatttattaaagagctacatatttaatataaaagacacaaattccaagttaaagttactactt 2060084  T
Q  104 taaacttcttaa 115  Q
    |||| |||||||    
T  2060083 taaatttcttaa 2060072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 10690819 - 10690915
Alignment:
Q  4 taactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||| |||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||    
T  10690819 taactaaaattagtaatttttcattaaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagtttcaaattaaaattacta 10690915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 13351356 - 13351241
Alignment:
Q  1 aggtaactaaaagtagtaacttttc-attgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttact 99  Q
    ||||||||||||||||| | ||||  |||||||||||||||||||| |||||||| |||||||| ||||||||||||| |||||| |||| ||| |||||    
T  13351356 aggtaactaaaagtagttatttttttattgaaaatcaacaattattaattaaaagttacatattaaatataaaaaacacaagttctaagtcaaagttact 13351257  T
Q  100 actttaaacttcttaa 115  Q
    ||||||||||||||||    
T  13351256 actttaaacttcttaa 13351241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 8771021 - 8770916
Alignment:
Q  10 aaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactactttaaact 109  Q
    ||||||||||||||||| | |||| ||||||||||| |||||||| |||||||||||||||||||||| || || ||||| ||| |||||||||||||||    
T  8771021 aaagtagtaacttttcaataaaaaccaacaattatttattaaaagttacatatttaatataaaaaacaaaaatttcaagtcaaaattactactttaaact 8770922  T
Q  110 tcttaa 115  Q
    ||||||    
T  8770921 tcttaa 8770916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 16123312 - 16123425
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||||| |||||||||||||||||||  ||||||| ||||||||| | |||||||||||||||||||||| ||||||| | | ||| ||||||    
T  16123312 aggtaactaaaagaagtaacttttcattgaaaacaaacaattgttgattaaatgttacatatttaatataaaaaacacaagttcctaatcaaaattacta 16123411  T
Q  101 ctttaaacttctta 114  Q
     |||||||||||||    
T  16123412 atttaaacttctta 16123425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 26229997 - 26229884
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||||||||||| |||| ||| |||| |||||||||||||||||||| |||||||||||||||||||| |||| ||  |||| ||| ||||||    
T  26229997 aggtaactaaaagtagtaattttttatt-aaaaccaacaattattgattaaaagttacatatttaatataaaaaatataaattttaagtcaaagttacta 26229899  T
Q  101 ctttaaacttcttaa 115  Q
     ||||||||||||||    
T  26229898 ttttaaacttcttaa 26229884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 446 - 530
Target Start/End: Complemental strand, 39923426 - 39923342
Alignment:
Q  446 tgttgcgaataggatgagtttaaggctgctggaagtggtgaaccatatgttgtaaaaaatctagcaggtaatttgacaagtatat 530  Q
    ||||| ||||||||  ||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||    
T  39923426 tgttgtgaataggacaagtttaaggctactggaagtggtgaaccacatgttgtaaaaaatccagcaggtaatttgactagtatat 39923342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 15411765 - 15411652
Alignment:
Q  3 gtaactaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaaatttactac 101  Q
    ||||||||||||||||| |||| |||||||| ||||||| ||| ||| ||||||||||||||||||||||||   | ||||| ||||  ||| ||||||     
T  15411765 gtaactaaaagtagtaattttttattgaaaaacaacaataatttattaaaaagctacatatttaatataaaatgaacaagtttcaagacaaagttactat 15411666  T
Q  102 tttaaacttcttaa 115  Q
    ||||||||||||||    
T  15411665 tttaaacttcttaa 15411652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 9747353 - 9747465
Alignment:
Q  4 taactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaaatttactact 102  Q
    |||||||||||||||||| || |||||||| |||||| ||||  | |||| ||||||||||||||||||||   | ||||||||||  ||| |||||| |    
T  9747353 taactaaaagtagtaactatttattgaaaaacaacaactatttgtaaaaaagctacatatttaatataaaatgaacaagttccaagacaaaattactatt 9747452  T
Q  103 ttaaacttcttaa 115  Q
    |||||||||||||    
T  9747453 ttaaacttcttaa 9747465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 45062238 - 45062346
Alignment:
Q  8 taaaagtagtaacttttcattgaaaatcaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaaatttactactttaa 106  Q
    ||||||| ||||||||| ||| |||| ||| ||||||| ||||||| | ||||| ||||||||||||  || |||||||||  |||| |||||| ||| |    
T  45062238 taaaagtggtaactttttattaaaaaacaaaaattatttattaaaaagttacatgtttaatataaaatgcacaagttccaaaataaagttactattttga 45062337  T
Q  107 acttcttaa 115  Q
    |||||||||    
T  45062338 acttcttaa 45062346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 12438788 - 12438723
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataa 71  Q
    |||||||| || |||||||||||| |||| ||||||||||| ||||||| ||| |||||||||||||    
T  12438788 aactaaaaataataacttttcatt-aaaaccaacaattatttattaaaaactatatatttaatataa 12438723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 43388907 - 43388859
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa 53  Q
    |||||||||||| || |||| |||||||||||||||||||| |||||||    
T  43388907 aactaaaagtagaaattttttattgaaaatcaacaattatttattaaaa 43388859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 23932602 - 23932713
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    |||||||| |||||||||| |||||||||  |||||||||| ||||||| | |  ||| |||||||||||  || ||||||| |   || ||||||| ||    
T  23932602 aactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagttttatagttaatataaaatgcacaagttccgatacaattttactattt 23932701  T
Q  104 taaacttcttaa 115  Q
    ||||||||||||    
T  23932702 taaacttcttaa 23932713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 22162217 - 22162149
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaa 73  Q
    |||||||||||||||||||| |||| ||| ||||||||| | ||| |||| ||||||| |||||||||||    
T  22162217 aactaaaagtagtaactttttattg-aaaccaacaattaattattaaaaatctacatagttaatataaaa 22162149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 35729209 - 35729262
Alignment:
Q  59 atatttaatataaaaaacataagttccaagttaaatttactactttaaacttct 112  Q
    ||||||| ||||||| ||| |||||||||  ||||||| |||||||||||||||    
T  35729209 atatttactataaaatacacaagttccaatataaatttgctactttaaacttct 35729262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 40562215 - 40562171
Alignment:
Q  8 taaaagtagtaacttttcattgaaaatcaacaattattgattaaa 52  Q
    |||||| ||||| |||| |||||||||||||||||||| ||||||    
T  40562215 taaaagcagtaagtttttattgaaaatcaacaattatttattaaa 40562171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 41492220 - 41492164
Alignment:
Q  58 catatttaatataaaaaacataagttccaagttaaatttactactttaaacttctta 114  Q
    ||||||||||| ||||  || ||||| ||||||||| ||| ||||||||||||||||    
T  41492220 catatttaataaaaaatgcacaagtttcaagttaaagttattactttaaacttctta 41492164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 3e-49; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 384571 - 384460
Alignment:
Q  4 taactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||    
T  384571 taactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaaaacaagttccaagttaaagttactactt 384472  T
Q  104 taaacttcttaa 115  Q
    ||||||||||||    
T  384471 taaacttcttaa 384460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 3562022 - 3561908
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||  |||||||| ||||||    
T  3562022 aggtaactaaaagcagtaacttttcattgaaaatcaataattattgattaaaagctacatatttaatataaaaaacacaagttttaagttaaagttacta 3561923  T
Q  101 ctttaaacttcttaa 115  Q
    |||||||||||||||    
T  3561922 ctttaaacttcttaa 3561908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 39757254 - 39757140
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||| ||||||    
T  39757254 aggtaactaaaagtagtaatttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacacaaatttcaagttaaagttacta 39757155  T
Q  101 ctttaaacttcttaa 115  Q
     ||||||||||||||    
T  39757154 ttttaaacttcttaa 39757140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 9331995 - 9332109
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||| ||||| ||| ||||||    
T  9331995 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaatgttacatatttaatataaaaaacacaagtttcaagtcaaagttacta 9332094  T
Q  101 ctttaaacttcttaa 115  Q
     ||||||||||||||    
T  9332095 atttaaacttcttaa 9332109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 19889378 - 19889487
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactacttt 104  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||| ||||||||||| ||| ||||||||||    
T  19889378 aactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaacacaagttccaagtcaaagttactacttt 19889477  T
Q  105 aaacttctta 114  Q
    ||||||||||    
T  19889478 aaacttctta 19889487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 5909422 - 5909313
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactacttt 104  Q
    ||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| ||| ||||||||||    
T  5909422 aactaaaagcagtaacttttcattgaaaaccaacaattatttattaaaagctacatatttaatataaaaaacacaagtttcaagtcaaagttactacttt 5909323  T
Q  105 aaacttctta 114  Q
    ||||||||||    
T  5909322 aaacttctta 5909313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 47120337 - 47120228
Alignment:
Q  2 ggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactac 101  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||| | |||||||||||||||||||||| ||||||||||| ||| ||||||     
T  47120337 ggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaacacaagttccaagtcaaagttactaa 47120238  T
Q  102 tttaaacttc 111  Q
    ||||||||||    
T  47120237 tttaaacttc 47120228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 12086071 - 12085962
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactacttt 104  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||| || ||||||||||||||||||| ||||| ||||| ||| |||||  |||    
T  12086071 aactaaaagtagtaacttttcgttgaaaatcaacaattatttattaaaagttaaatatttaatataaaaaacacaagtttcaagtcaaaattacttattt 12085972  T
Q  105 aaacttctta 114  Q
    ||||||||||    
T  12085971 aaacttctta 12085962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 12 - 115
Target Start/End: Complemental strand, 18102364 - 18102260
Alignment:
Q  12 agtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataa-aaaacataagttccaagttaaatttactactttaaactt 110  Q
    |||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||| |||||| ||||| ||||| ||| ||| || |||||||||    
T  18102364 agtagtaatttttcattgaaaatcaacaattattgattaaatgttacatatttaatataaaaaaacacaagtttcaagtcaaagttattaatttaaactt 18102265  T
Q  111 cttaa 115  Q
    |||||    
T  18102264 cttaa 18102260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 23982896 - 23982785
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagct-acatatttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    |||||||||||||||||||||||| |||| ||||||||| | ||||||| || | ||||||||||||||| ||| ||||||||||| ||| |||||||||    
T  23982896 aactaaaagtagtaacttttcattcaaaaccaacaattaattattaaaaacttaaatatttaatataaaatacacaagttccaagtcaaagttactactt 23982797  T
Q  104 taaacttcttaa 115  Q
    |||| |||||||    
T  23982796 taaatttcttaa 23982785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 24250351 - 24250417
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataa 71  Q
    ||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  24250351 aactaaaagtattaacttttcattgaaaaccaacaattatttattaaaagctacatatttaatataa 24250417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 36548600 - 36548490
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactacttt 104  Q
    ||||||||||||||| |||| |||||||| ||||||||||||||||||   |||||||||||||||||||| | || ||  |||| ||| |||||| |||    
T  36548600 aactaaaagtagtaattttttattgaaaaccaacaattattgattaaatattacatatttaatataaaaaatacaaattttaagtcaaagttactaattt 36548501  T
Q  105 aaacttcttaa 115  Q
    |||||||||||    
T  36548500 aaacttcttaa 36548490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 7170040 - 7170149
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaag-ctacatatttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    |||||||| ||||||||||| |||||||  ||||||||| | |||||||  ||||||| |||||||||||  || ||||||||||| ||| |||||||||    
T  7170040 aactaaaaatagtaactttttattgaaac-caacaattaattattaaaaatctacataattaatataaaatgcacaagttccaagtcaaagttactactt 7170138  T
Q  104 taaacttctta 114  Q
    |||||||||||    
T  7170139 taaacttctta 7170149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 115
Target Start/End: Original strand, 8170593 - 8170669
Alignment:
Q  39 aattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactactttaaacttcttaa 115  Q
    |||||||||||||||| || ||||||||||||||||| | |||||  |||||||| |||||||||||||||| ||||    
T  8170593 aattattgattaaaagttatatatttaatataaaaaataaaagttttaagttaaagttactactttaaactttttaa 8170669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 5 - 107
Target Start/End: Complemental strand, 47457602 - 47457499
Alignment:
Q  5 aactaaaagtagtaacttttc-attgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaaatttactact 102  Q
    ||||||||||||||| ||||  ||||||||| |||||||||| ||| |||||||||| || ||||||||||  ||||| |||||||| ||| ||||||||    
T  47457602 aactaaaagtagtaatttttttattgaaaat-aacaattatttatttaaaagctacacatataatataaaatgcataaattccaagtcaaagttactact 47457504  T
Q  103 ttaaa 107  Q
    |||||    
T  47457503 ttaaa 47457499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 24699181 - 24699240
Alignment:
Q  14 tagtaacttttcattgaaaatcaacaattattgatta-aaagctacatatttaatataaa 72  Q
    |||||||||||||||||||| ||||||||||| |||| |||| |||||||||||||||||    
T  24699181 tagtaacttttcattgaaaaacaacaattatttattataaagttacatatttaatataaa 24699240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 39869160 - 39869268
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    |||||||| |||||||||||||||||||| ||||||||| | ||| ||||  |||||||||||||| |||  || ||||| ||||| ||| |||||||||    
T  39869160 aactaaaaatagtaacttttcattgaaaaccaacaattaattattaaaaatttacatatttaatat-aaatgcacaagtttcaagtcaaa-ttactactt 39869257  T
Q  104 taaacttctta 114  Q
    || ||||||||    
T  39869258 tacacttctta 39869268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 19868151 - 19868235
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgat-taaaagctacatatttaatataaaaaacataagttccaag 88  Q
    ||||||||||||||| ||||||||||||| || |||||||| ||  ||||| || ||||||||||||||| ||| ||||| ||||    
T  19868151 aactaaaagtagtaaattttcattgaaaaacaccaattatttatcaaaaagttatatatttaatataaaatacacaagtttcaag 19868235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 41331551 - 41331487
Alignment:
Q  50 aaaagctacatatttaatataaaaaacataagttccaagttaaatttactactttaaacttctta 114  Q
    |||| |||||||||||||||||||  || ||||||||||| ||| ||||||||||||| ||||||    
T  41331551 aaaacctacatatttaatataaaatgcacaagttccaagtcaaagttactactttaaatttctta 41331487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 25709540 - 25709429
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    ||||||||||||||| |||| ||||| || ||||||| ||| ||| ||||||||| |||||||||| |||   | |||||||||   ||| |||||| ||    
T  25709540 aactaaaagtagtaattttttattgataaacaacaataatttattaaaaagctacctatttaatatgaaatgaacaagttccaatacaaagttactattt 25709441  T
Q  104 taaacttcttaa 115  Q
    ||||||||||||    
T  25709440 taaacttcttaa 25709429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 114
Target Start/End: Original strand, 24250602 - 24250645
Alignment:
Q  71 aaaaacataagttccaagttaaatttactactttaaacttctta 114  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  24250602 aaaaacacaagttccaagtcaaagttactactttaaacttctta 24250645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 24463095 - 24463027
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaag-ctacatatttaatataaaa 73  Q
    ||||||||||||||| || | |||||||| |||||| |||| |||||||  |||||||||||||||||||    
T  24463095 aactaaaagtagtaatttcttattgaaaa-caacaagtatttattaaaaaactacatatttaatataaaa 24463027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 2276719 - 2276791
Alignment:
Q  12 agtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagtt 83  Q
    |||||||||| ||||||||||| || |||||||| ||| ||||| ||  |||||||||||||| ||| |||||    
T  2276719 agtagtaactcttcattgaaaaacaccaattatttattaaaaagttatctatttaatataaaatacacaagtt 2276791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 8091453 - 8091405
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa 53  Q
    |||||||||||| || |||| |||||||||||| ||||||| |||||||    
T  8091453 aactaaaagtagcaaatttttattgaaaatcaataattatttattaaaa 8091405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 8594998 - 8595045
Alignment:
Q  67 tataaaaaacataagttccaagttaaatttactactttaaacttcttaa 115  Q
    ||||||||||| ||||||||||||||| | |||| ||||||||||||||    
T  8594998 tataaaaaacacaagttccaagttaaagtcacta-tttaaacttcttaa 8595045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 12650858 - 12650906
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa 53  Q
    |||||||| ||||||||||||||||||||  | |||||||| |||||||    
T  12650858 aactaaaaatagtaacttttcattgaaaactaccaattatttattaaaa 12650906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 99; Significance: 1e-48; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 22974717 - 22974603
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||    
T  22974717 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagttacatatttaatataaaaaacacaagttccaagttaaagttacta 22974618  T
Q  101 ctttaaacttcttaa 115  Q
     ||||||||||||||    
T  22974617 ttttaaacttcttaa 22974603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 23813684 - 23813798
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||    
T  23813684 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagttacatatttaatataaaaaacacaagttccaagttaaagttacta 23813783  T
Q  101 ctttaaacttcttaa 115  Q
     ||||||||||||||    
T  23813784 ttttaaacttcttaa 23813798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 5363037 - 5362925
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  5363037 aggtaactaaaagtagtaacttttcattgaaaaccaacaattgttgattaaaagctacatatttaatataaaaaacacaagttccaagttaaagttacta 5362938  T
Q  101 ctttaaacttctt 113  Q
    |||||||||||||    
T  5362937 ctttaaacttctt 5362925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 2830825 - 2830711
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||| || ||||| ||| ||    
T  2830825 aggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaaattctaaattaaagttatta 2830726  T
Q  101 ctttaaacttcttaa 115  Q
     ||||||||||||||    
T  2830725 ttttaaacttcttaa 2830711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 31069726 - 31069612
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||||||||||| |||| |||||||| |||||||||||||||||| | |||||||||||||||||||||| ||||||||||| ||| ||||||    
T  31069726 aggtaactaaaagtagtaagtttttattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaacacaagttccaagtcaaagttacta 31069627  T
Q  101 ctttaaacttcttaa 115  Q
     ||||||||||||||    
T  31069626 atttaaacttcttaa 31069612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 1017920 - 1017808
Alignment:
Q  4 taactaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaaatttactact 102  Q
    |||||||||||||||||||||| ||||||| ||||||||||| ||| ||||  ||||||||||||||||||  || || || ||||| ||| ||||||||    
T  1017920 taactaaaagtagtaacttttcgttgaaaaccaacaattatttattaaaaatttacatatttaatataaaatgcacaactttcaagtcaaagttactact 1017821  T
Q  103 ttaaacttcttaa 115  Q
    |||||||||||||    
T  1017820 ttaaacttcttaa 1017808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 7 - 115
Target Start/End: Original strand, 10887068 - 10887177
Alignment:
Q  7 ctaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaaatttactacttta 105  Q
    ||||||||||||| |||| |||||||| ||| | ||||| ||||||| |||||||||||||||||||| ||| ||||||||| | ||| |||| ||||||    
T  10887068 ctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatataaaatacacaagttccaaatcaaaattaccacttta 10887167  T
Q  106 aacttcttaa 115  Q
    ||||||||||    
T  10887168 aacttcttaa 10887177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 3850589 - 3850654
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatata 70  Q
    |||||||||||| |||||||||||||||||||| ||||||| |||||||| |||||||||||||||    
T  3850589 aactaaaagtagcaacttttcattgaaaatcaataattattcattaaaagttacatatttaatata 3850654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 32615607 - 32615540
Alignment:
Q  1 aggtaactaaaagta---gtaacttttcattgaaaatcaacaattattgattaaaagctacatattta 65  Q
    |||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32615607 aggtaactaaaagtactagtaacttttcattgaaaatcatcaattattgattaaaagctacatattta 32615540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 15 - 115
Target Start/End: Original strand, 31568157 - 31568257
Alignment:
Q  15 agtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactactttaaacttctta 114  Q
    |||| ||||| ||||||||||||||||| ||  | |||||||||||||||| ||||||||||| ||||| ||| | ||| |||||||||||||||| |||    
T  31568157 agtagctttttattgaaaatcaacaatttttattcaaaagctacatatttattataaaaaacacaagtttcaaatcaaagttactactttaaacttttta 31568256  T
Q  115 a 115  Q
    |    
T  31568257 a 31568257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 7 - 115
Target Start/End: Original strand, 6016895 - 6017004
Alignment:
Q  7 ctaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaaatttactacttta 105  Q
    ||||||||||||||||||||||||||| ||||| |||||  || ||||| || ||||||||||| |||  || ||||||||||| ||| |||| ||||||    
T  6016895 ctaaaagtagtaacttttcattgaaaaacaacacttattttttaaaaagttatatatttaatatgaaatgcacaagttccaagtcaaagttaccacttta 6016994  T
Q  106 aacttcttaa 115  Q
    ||||| ||||    
T  6016995 aactttttaa 6017004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 7 - 115
Target Start/End: Complemental strand, 18332827 - 18332718
Alignment:
Q  7 ctaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaaatttactacttta 105  Q
    ||||||||||||| |||| |||||||| ||| | ||||| ||||||| |||| ||||||||||| |||  |||||||||||||| ||| |||  ||||||    
T  18332827 ctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctatatatttaatatgaaatgcataagttccaagtcaaaattatcacttta 18332728  T
Q  106 aacttcttaa 115  Q
    ||||||||||    
T  18332727 aacttcttaa 18332718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 31169903 - 31169801
Alignment:
Q  6 actaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagc-tacatatttaatataaaaaacataagttccaagttaaatttactacttt 104  Q
    ||||||| |||||| ||||| ||||||| ||| ||||| | ||||||| | ||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  31169903 actaaaaatagtaatttttctttgaaaaccaataattaattattaaaaacctacatatttaatataaaatgcacaagttccaagtcaaagttactacttt 31169804  T
Q  105 aaa 107  Q
    |||    
T  31169803 aaa 31169801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 17596385 - 17596488
Alignment:
Q  11 aagtagtaacttttcattgaaaatcaacaattattgattaaaag-ctacatatttaatataaaaaacataagttccaagttaaatttactactttaaact 109  Q
    |||||||||||||| |||||||  ||||||||| | |||||||  ||||||| |||||||||||  || ||||||||| | ||| |||||||||||||||    
T  17596385 aagtagtaactttttattgaaac-caacaattaattattaaaaatctacatagttaatataaaatgcacaagttccaaatcaaagttactactttaaact 17596483  T
Q  110 tctta 114  Q
    |||||    
T  17596484 tctta 17596488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 8977607 - 8977496
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    |||||||||||| ||| ||| |||||||| ||||||| ||| ||| ||||| ||||||||||||||||||  || ||||| |||   |||||||||| ||    
T  8977607 aactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaagttacatatttaatataaaatgcacaagttacaatacaaatttactattt 8977508  T
Q  104 taaacttcttaa 115  Q
    | ||||||||||    
T  8977507 tgaacttcttaa 8977496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 34300403 - 34300472
Alignment:
Q  8 taaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaaca 77  Q
    ||||||| ||||||||| || ||||||||| ||||||| ||| ||||||||||||||||||||||||||||    
T  34300403 taaaagtggtaacttttgat-gaaaatcaataattatttatttaaaagctacatatttaatataaaaaaca 34300472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 17141315 - 17141381
Alignment:
Q  8 taaaagtagtaacttttcattgaaaatcaacaattattgattaaaa-gctacatatttaatataaaa 73  Q
    |||||||||| |||||| ||| |||| ||||||| ||| ||||||| ||||||||||||||||||||    
T  17141315 taaaagtagttactttttattaaaaaacaacaataatttattaaaaagctacatatttaatataaaa 17141381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 31503834 - 31503890
Alignment:
Q  59 atatttaatataaaaaacataagttccaagttaaatttactactttaaacttcttaa 115  Q
    ||||||||||||||| ||| |||||||||  |||| ||||||||||||| |||||||    
T  31503834 atatttaatataaaatacacaagttccaatataaacttactactttaaatttcttaa 31503890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 26602571 - 26602523
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa 53  Q
    ||||||||||||||| |||||| |||||| ||||||||| | |||||||    
T  26602571 aactaaaagtagtaatttttcactgaaaaccaacaattaattattaaaa 26602523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 1e-48; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 4047446 - 4047560
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  4047446 aggtaactaaaagtagtaacttttcattgaaaaccaacaattgttgattaaaagctacatatttaatataaaaaacacaagttccaagttaaagttacta 4047545  T
Q  101 ctttaaacttcttaa 115  Q
    |||||||||||||||    
T  4047546 ctttaaacttcttaa 4047560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 9184241 - 9184355
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||    
T  9184241 aggtaactaaaagtagtaacttttcattgaaaaccaataattattgattaaaaactacatatttaatataaaaaacacaagttccaagttaaagttacta 9184340  T
Q  101 ctttaaacttcttaa 115  Q
    |||||||||||||||    
T  9184341 ctttaaacttcttaa 9184355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 2795557 - 2795671
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||| ||||||||||| ||| ||||||    
T  2795557 aggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagttacatatttaatacaaaaaacacaagttccaagtcaaagttacta 2795656  T
Q  101 ctttaaacttcttaa 115  Q
    |||||||||||||||    
T  2795657 ctttaaacttcttaa 2795671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 30328468 - 30328357
Alignment:
Q  4 taactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    |||||||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  30328468 taactaaaagtagtcatttttcattaaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaagttccaagttaaagttactactt 30328369  T
Q  104 taaacttcttaa 115  Q
    ||||||||||||    
T  30328368 taaacttcttaa 30328357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 34578045 - 34578159
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||  |||||||| ||||||    
T  34578045 aggtaactaaaagtaataatttttcattgaaaatcaacaattgttgattaaaagctacatatttaatataaaaaatacaagttttaagttaaagttacta 34578144  T
Q  101 ctttaaacttcttaa 115  Q
     ||||||||| ||||    
T  34578145 ttttaaactttttaa 34578159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 15190906 - 15191021
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatat-aaaaaacataagttccaagttaaatttact 99  Q
    |||||| |||||||||||| |||||||||||||  ||||||||||||||||||| |||||||||||||| |||||||| ||||| ||||| ||| |||||    
T  15190906 aggtaagtaaaagtagtaatttttcattgaaaacaaacaattattgattaaaagttacatatttaatataaaaaaacacaagtttcaagtcaaaattact 15191005  T
Q  100 actttaaacttcttaa 115  Q
    ||||||||||||||||    
T  15191006 actttaaacttcttaa 15191021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 11375997 - 11376103
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaaca-taagttccaagttaaatttactactt 103  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||  || || ||||| ||| |||||||||    
T  11375997 aactaaaagtagtaacttttcattgaaaatcaataattatttattaaaagctacatatttaatataaaaaacacaaaatttcaagtcaaagttactactt 11376096  T
Q  104 taaactt 110  Q
    |||||||    
T  11376097 taaactt 11376103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 41350244 - 41350350
Alignment:
Q  9 aaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactactttaaac 108  Q
    ||||||| ||| ||| || |||||||||||||||||| |||||||| ||||||||||||||||||| || ||||||||||| ||| ||||||||||||||    
T  41350244 aaaagtattaattttgcactgaaaatcaacaattatttattaaaagttacatatttaatataaaaagcacaagttccaagtcaaaattactactttaaac 41350343  T
Q  109 ttcttaa 115  Q
    |||||||    
T  41350344 ttcttaa 41350350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 28629916 - 28630025
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactacttt 104  Q
    |||||||| || ||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||| ||||  |||||||||  || ||||||    
T  28629916 aactaaaaataataacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaacacaagtctcaagttaaagatattacttt 28630015  T
Q  105 aaacttctta 114  Q
    ||||||||||    
T  28630016 aaacttctta 28630025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 31366096 - 31365980
Alignment:
Q  1 aggtaactaaaagtagtaacttttc--attgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttac 98  Q
    ||||| ||||| ||||||||||||   |||||||| |||||||||||||||||| | |||||||||||||||||||||| ||||||||||| ||| ||||    
T  31366096 aggtagctaaatgtagtaactttttttattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaacacaagttccaagtcaaagttac 31365997  T
Q  99 tactttaaacttcttaa 115  Q
    || ||||||||||||||    
T  31365996 taatttaaacttcttaa 31365980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 12642133 - 12642023
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactacttt 104  Q
    ||||||||||||||| ||||||||||||| |||||||||| | ||||| | |||||||||||||||||||||| ||||||||| | ||| ||| || |||    
T  12642133 aactaaaagtagtaatttttcattgaaaaccaacaattatcgtttaaatgttacatatttaatataaaaaacacaagttccaaatcaaagttattaattt 12642034  T
Q  105 aaacttcttaa 115  Q
    |||||||||||    
T  12642033 aaacttcttaa 12642023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 14466598 - 14466524
Alignment:
Q  41 ttattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactactttaaacttcttaa 115  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  14466598 ttattgattaaaagctacatatttaatataaaaaacacaagtttcaagttaaagttactactttaaacttcttaa 14466524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 11636769 - 11636878
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    ||||||||||||||||||||||||||||| ||||||||| | ||| ||||  |||||||||||||| |||  || ||||| ||||| ||| |||||||||    
T  11636769 aactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaatttacatatttaatat-aaatgcacaagtttcaagtcaaagttactactt 11636867  T
Q  104 taaacttctta 114  Q
    |||||||||||    
T  11636868 taaacttctta 11636878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 8103720 - 8103611
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaag-ctacatatttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    |||||||| ||||||||||| |||||||  ||||||||| | |||||||  ||||||| |||||||||||  || ||||||||||| ||| |||||||||    
T  8103720 aactaaaaatagtaactttttattgaaac-caacaattaattattaaaaatctacataattaatataaaatgcacaagttccaagtcaaagttactactt 8103622  T
Q  104 taaacttctta 114  Q
    |||||||||||    
T  8103621 taaacttctta 8103611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 16174762 - 16174653
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagc-tacatatttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    ||||||||||||||||||||||||||||| ||||||||| | ||||||| | |||||||||||||| |||  || ||||| ||| | ||| |||||||||    
T  16174762 aactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaacttacatatttaatat-aaatgcacaagtttcaattcaaagttactactt 16174664  T
Q  104 taaacttctta 114  Q
    |||| ||||||    
T  16174663 taaatttctta 16174653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 115
Target Start/End: Complemental strand, 24329774 - 24329665
Alignment:
Q  7 ctaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaaatttactacttta 105  Q
    ||||||||||||| |||| |||||||| ||||| ||||| ||| ||||| ||| ||||||||||||||   | ||||||||||| ||| |||| ||||||    
T  24329774 ctaaaagtagtaatttttaattgaaaaacaacatttatttatttaaaagatacctatttaatataaaatgtacaagttccaagtcaaagttaccacttta 24329675  T
Q  106 aacttcttaa 115  Q
    ||||| ||||    
T  24329674 aactttttaa 24329665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 5958264 - 5958196
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaa 72  Q
    ||||||||||||||| ||||||||||||||||||||||| | ||| ||||  |||||||||||||||||    
T  5958264 aactaaaagtagtaatttttcattgaaaatcaacaattaattattaaaaatttacatatttaatataaa 5958196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 29538768 - 29538827
Alignment:
Q  8 taaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaat 67  Q
    |||||| |||||||||||||| |||| ||||||||||| ||||||||||| |||||||||    
T  29538768 taaaagaagtaacttttcattaaaaaccaacaattatttattaaaagctatatatttaat 29538827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 31567634 - 31567563
Alignment:
Q  3 gtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaag-ctacatatttaatataaaa 73  Q
    ||||||||||  |||||||||| |||||||| ||| ||||||| |||||||  |||||||||||||||||||    
T  31567634 gtaactaaaaagagtaactttttattgaaaaacaataattattcattaaaaaactacatatttaatataaaa 31567563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 10665109 - 10664995
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaaatttact 99  Q
    ||||||||||||||| |||||||||||||||||| |  ||||||| ||| ||||| || | |||||||||  || ||| ||||||||||  ||| ||||     
T  10665109 aggtaactaaaagtaataacttttcattgaaaat-attaattatttattaaaaagttataaatttaatatgcaatacacaagttccaagacaaacttacc 10665011  T
Q  100 actttaaacttcttaa 115  Q
    | |||||| |||||||    
T  10665010 attttaaatttcttaa 10664995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 15241091 - 15241043
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa 53  Q
    |||||||| ||||| | |||||||||||| ||||||||||| |||||||    
T  15241091 aactaaaaatagtatcatttcattgaaaaacaacaattatttattaaaa 15241043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 3e-46; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 7140603 - 7140489
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||    
T  7140603 aggtaactaaaagtagtaactttttattgaaaaccaacaattattgattaaaaactacatatttaatataaaaaacacaagttccaagttaaaattacta 7140504  T
Q  101 ctttaaacttcttaa 115  Q
    |||||||||||||||    
T  7140503 ctttaaacttcttaa 7140489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 10129137 - 10129251
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    |||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  10129137 aggtaactaaaattagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaagttccaagttaaaattacta 10129236  T
Q  101 ctttaaacttcttaa 115  Q
    |||||||||||||||    
T  10129237 ctttaaacttcttaa 10129251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 9801704 - 9801816
Alignment:
Q  3 gtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactact 102  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||| ||||| ||| ||||||||    
T  9801704 gtaattaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagttatatatttaatataacaaacataagtttcaagtcaaagttactact 9801803  T
Q  103 ttaaacttcttaa 115  Q
    |||||||||||||    
T  9801804 ttaaacttcttaa 9801816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 13328085 - 13327971
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||| ||||| ||||| ||| ||||||    
T  13328085 aggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaacacaagtttcaagtcaaagttacta 13327986  T
Q  101 ctttaaacttcttaa 115  Q
     ||||||||||||||    
T  13327985 atttaaacttcttaa 13327971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 9743899 - 9744008
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactacttt 104  Q
    ||||||||||||||| |||| |||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  9743899 aactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaacataagttccaagtcaaagttactacttt 9743998  T
Q  105 aaacttctta 114  Q
    ||||||||||    
T  9743999 aaacttctta 9744008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 18567553 - 18567446
Alignment:
Q  8 taaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactactttaaa 107  Q
    ||||||| |||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||| | ||||||||| ||| |||||| ||||||    
T  18567553 taaaagtggtaacttttcattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaacacatgttccaagtcaaagttactaatttaaa 18567454  T
Q  108 cttcttaa 115  Q
    ||||||||    
T  18567453 cttcttaa 18567446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 39701947 - 39701833
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| | |||||||| |||||||||||||||||||||| || || ||||| ||| ||||||    
T  39701947 aggtaactaaaagtagtaacttttcgttgaaaaccaacaattactaattaaaagttacatatttaatataaaaaacacaaatttcaagtcaaagttacta 39701848  T
Q  101 ctttaaacttcttaa 115  Q
    |||||||||| ||||    
T  39701847 ctttaaacttgttaa 39701833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 40210965 - 40210851
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||| || ||| |||| ||| ||||||    
T  40210965 aggtaactaaaagtattaacttttcattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaacacaaattcaaagtcaaagttacta 40210866  T
Q  101 ctttaaacttcttaa 115  Q
     ||||||| ||||||    
T  40210865 atttaaacgtcttaa 40210851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 8140605 - 8140715
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactacttt 104  Q
    ||||||||||||| | ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||  |||| ||| ||| ||||||    
T  8140605 aactaaaagtagtgatttttcattgaaaaccaacaattatttattaaaagctacatatttaatataaaaaacataaattttaagtcaaaattattacttt 8140704  T
Q  105 aaacttcttaa 115  Q
    || ||||||||    
T  8140705 aatcttcttaa 8140715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 19343981 - 19343873
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaata-taaaaaacataagttccaagttaaatttact 99  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||| ||||||| | ||||| ||||| ||| |||||    
T  19343981 aggtaaccaaaagtagtaacttttcattgaaaaccaacaattattgagtaaaagttacatatttaatattaaaaaatacaagtttcaagtcaaaattact 19343882  T
Q  100 actttaaac 108  Q
    |||||||||    
T  19343881 actttaaac 19343873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 45519658 - 45519593
Alignment:
Q  49 taaaagctacatatttaatataaaaaacataagttccaagttaaatttactactttaaacttctta 114  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  45519658 taaaagctacatatttaatataaaaaacacaagttccaagttaaagttactactttaaacttctta 45519593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 38527858 - 38527971
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgatt----aaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||| ||||||||||||||||| |||| |||||| |||    |||||||||||||||||||||||||||| || |||||| | ||| ||| ||    
T  38527858 aactaaaagtaataacttttcattgaaaaccaacgattatttatttattaaaagctacatatttaatataaaaaacacaaattccaaatcaaaattatta 38527957  T
Q  101 ctttaaacttctta 114  Q
    ||||||||||||||    
T  38527958 ctttaaacttctta 38527971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 35678415 - 35678306
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    ||||||||||||||||||||||||||||| ||||||||| | ||| ||||  |||||||||||||| ||| ||| ||||| ||||| ||| |||||||||    
T  35678415 aactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaatttacatatttaatat-aaatacacaagtttcaagtcaaagttactactt 35678317  T
Q  104 taaacttctta 114  Q
    |||||||||||    
T  35678316 taaacttctta 35678306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 26682105 - 26682216
Alignment:
Q  5 aactaaaagtagtaacttttc-attgaaaatcaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaaatttactact 102  Q
    ||||||||||||||| ||||  |||||||| ||||||||||| ||||||| |||||| |||||||||||||  || ||||||||||| ||| ||||||||    
T  26682105 aactaaaagtagtaatttttttattgaaaa-caacaattatttattaaaaagctacacatttaatataaaatgcacaagttccaagtcaaagttactact 26682203  T
Q  103 ttaaacttcttaa 115  Q
    ||||| |||||||    
T  26682204 ttaaatttcttaa 26682216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 45516325 - 45516395
Alignment:
Q  4 taactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaa 75  Q
    ||||||||||||||||||||| ||||||| | |||||||||| |||||||||||||||||||||||| ||||    
T  45516325 taactaaaagtagtaactttttattgaaact-aacaattatttattaaaagctacatatttaatatataaaa 45516395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 1203638 - 1203748
Alignment:
Q  4 taactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    |||||||||  |||||||||||||||||||  || ||||||| |||||  | |||||||||||||||||||||| |||||   | | ||| |||||||||    
T  1203638 taactaaaaaaagtaacttttcattgaaaacaaataattattaattaactgttacatatttaatataaaaaacacaagtttttaatcaaaattactactt 1203737  T
Q  104 taaacttctta 114  Q
    |||||||||||    
T  1203738 taaacttctta 1203748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 39703487 - 39703561
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaa 75  Q
    ||||||||||||||||||||||||| || |||| |||||||||  | ||||||| ||||||||||||||||||||    
T  39703487 aggtaactaaaagtagtaacttttcgttaaaaaccaacaattacgggttaaaagttacatatttaatataaaaaa 39703561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 14816266 - 14816157
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    |||||||||||||||||||| |||||||| ||||||||| | ||| ||||  |||||||||||||| ||| ||| |||||  |||| ||| |||||||||    
T  14816266 aactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaatttacatatttaatat-aaatacacaagttttaagtcaaagttactactt 14816168  T
Q  104 taaacttctta 114  Q
    |||| ||||||    
T  14816167 taaatttctta 14816157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 14829474 - 14829583
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    |||||||||||||||||||| |||||||| ||||||||| | ||| ||||  |||||||||||||| ||| ||| |||||  |||| ||| |||||||||    
T  14829474 aactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaatttacatatttaatat-aaatacacaagttttaagtcaaagttactactt 14829572  T
Q  104 taaacttctta 114  Q
    |||| ||||||    
T  14829573 taaatttctta 14829583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 39024997 - 39024888
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaag-ctacatatttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    ||||||||||| |||||||| |||||||  ||||||||| | |||||||  ||||||| |||||||||||  || || |||||||| ||| |||||||||    
T  39024997 aactaaaagtaataactttttattgaaac-caacaattaattattaaaaatctacatagttaatataaaatgcacaaattccaagtcaaagttactactt 39024899  T
Q  104 taaacttctta 114  Q
    |||||||||||    
T  39024898 taaacttctta 39024888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 8284710 - 8284598
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa--gctacatatttaatataaaaaacataagttccaagttaaatttactact 102  Q
    |||||||||||||||||||| ||| ||||  |||||||||| |||||||   | || |||||||||||||| ||| |||||||||||  || || ||| |    
T  8284710 aactaaaagtagtaactttttattaaaaaagaacaattatttattaaaaagaccacctatttaatataaaatacacaagttccaagtcgaagttgctaat 8284611  T
Q  103 ttaaacttcttaa 115  Q
    |||||||||||||    
T  8284610 ttaaacttcttaa 8284598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 115
Target Start/End: Original strand, 26834600 - 26834709
Alignment:
Q  7 ctaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaaatttactacttta 105  Q
    ||||||||||||| |||| |||||||| ||| | ||||| ||||||| |||||||||||||||| |||  || ||||||||||| ||| |||| | ||||    
T  26834600 ctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaatgcacaagttccaagtcaaaattaccatttta 26834699  T
Q  106 aacttcttaa 115  Q
    || |||||||    
T  26834700 aatttcttaa 26834709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 115
Target Start/End: Original strand, 31812152 - 31812261
Alignment:
Q  7 ctaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaaatttactacttta 105  Q
    ||||||||||||| |||| ||||||||  || | ||||| ||||||| |||||||||||||||| |||  || ||||||||||| ||| |||| | ||||    
T  31812152 ctaaaagtagtaattttttattgaaaaataaaacttatttattaaaaagctacatatttaatatgaaatgcacaagttccaagtcaaaattaccatttta 31812251  T
Q  106 aacttcttaa 115  Q
    ||||||||||    
T  31812252 aacttcttaa 31812261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 31451420 - 31451472
Alignment:
Q  63 ttaatataaaaaacataagttccaagttaaatttactactttaaacttcttaa 115  Q
    ||||||||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  31451420 ttaatataaaaaacacaagtttcaagttaaagttactactttaaacttcttaa 31451472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 4084680 - 4084574
Alignment:
Q  8 taaaagtagtaacttttcattgaaaatcaacaatt-attgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactactttaa 106  Q
    ||||||||||||||||||||||||||  ||||||| |||  | ||||  |||||||||||||| |||  |||||||| ||||| ||| ||||||||||||    
T  4084680 taaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatatttaatat-aaatgcataagtttcaagtcaaagttactactttaa 4084582  T
Q  107 acttctta 114  Q
    | ||||||    
T  4084581 atttctta 4084574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 4080531 - 4080425
Alignment:
Q  8 taaaagtagtaacttttcattgaaaatcaacaatt-attgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactactttaa 106  Q
    ||||||||||||||||||||||||||  ||||||| |||  | ||||  |||||||||||||| |||  || ||||| ||||| ||| ||||||||||||    
T  4080531 taaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatatttaatat-aaatgcacaagtttcaagtcaaagttactactttaa 4080433  T
Q  107 acttctta 114  Q
    | ||||||    
T  4080432 atttctta 4080425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 4102987 - 4102881
Alignment:
Q  8 taaaagtagtaacttttcattgaaaatcaacaatt-attgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactactttaa 106  Q
    ||||||||||||||||||||||||||  ||||||| |||  | ||||  |||||||||||||| |||  || ||||| ||||| ||| ||||||||||||    
T  4102987 taaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatatttaatat-aaatgcaaaagtttcaagtcaaagttactactttaa 4102889  T
Q  107 acttctta 114  Q
    | ||||||    
T  4102888 atttctta 4102881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 44091360 - 44091466
Alignment:
Q  9 aaaagtagtaacttttcattgaaaatcaacaattattgattaaaag-ctacatatttaatataaaaaacataagttccaagttaaatttactactttaaa 107  Q
    ||||||| ||| |||| |||||||| ||||||||||| |||||||  ||||| |||||||||||||  || |||||| || | ||| |||||||||||||    
T  44091360 aaaagtattaattttttattgaaaa-caacaattatttattaaaaaactacaaatttaatataaaatgcacaagttctaaatcaaagttactactttaaa 44091458  T
Q  108 cttcttaa 115  Q
     |||||||    
T  44091459 tttcttaa 44091466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 34249716 - 34249799
Alignment:
Q  7 ctaaaagtagtaacttttcattgaaaatcaacaattattgatt--aaaagctacatatttaatataaaaaacataagttccaag 88  Q
    ||||||||| ||| ||||||||||||| ||  ||||||| |||  ||||| || ||||||||||||||| ||| ||||||||||    
T  34249716 ctaaaagtattaatttttcattgaaaaacactaattatttattaaaaaagttaaatatttaatataaaatacacaagttccaag 34249799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 6818054 - 6818165
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    |||||||| |||||||||| |||||||||  |||||||||| ||||||| | |  ||| |||||||||||  || ||||||| |   || ||||||| ||    
T  6818054 aactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagttttatagttaatataaaatgcacaagttccgatacaattttactattt 6818153  T
Q  104 taaacttcttaa 115  Q
    ||||||||||||    
T  6818154 taaacttcttaa 6818165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 12132020 - 12132131
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    |||||||||||| ||||||| |||||||| | |||| |||| ||| ||||| || |||||||||||||||     |||||||||   ||| |||||||||    
T  12132020 aactaaaagtagcaactttttattgaaaaaccacaagtatttattaaaaagttatatatttaatataaaatgttcaagttccaatacaaacttactactt 12132119  T
Q  104 taaacttcttaa 115  Q
    |||| |||||||    
T  12132120 taaatttcttaa 12132131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 10974695 - 10974626
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaa 73  Q
    |||||||||||||||| ||| |||||||| ||| || |||| ||| ||||  ||||||||||||||||||    
T  10974695 aactaaaagtagtaacattttattgaaaaacaataactatttattaaaaaattacatatttaatataaaa 10974626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 35746031 - 35745982
Alignment:
Q  3 gtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaa 52  Q
    ||||||||||| | |||||||||||||||||  |||||||||| ||||||    
T  35746031 gtaactaaaagaaataacttttcattgaaaacaaacaattattaattaaa 35745982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 6850718 - 6850678
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattatt 45  Q
    |||||| ||||||||||||| |||||||| |||||||||||    
T  6850718 aactaatagtagtaactttttattgaaaaacaacaattatt 6850678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 37264538 - 37264586
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa 53  Q
    ||||||||||||||| || | |||||||||||| ||||||| |||||||    
T  37264538 aactaaaagtagtaaattgttattgaaaatcaataattatttattaaaa 37264586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 3e-46; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 3863363 - 3863477
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||    
T  3863363 aggtaactaaaggtagtaacttttcattgaaaatcagcaattattgattaaaagctacatatttaatataaaaaacacaagttccaagctaaagttacta 3863462  T
Q  101 ctttaaacttcttaa 115  Q
    |||||||||||||||    
T  3863463 ctttaaacttcttaa 3863477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 16875169 - 16875055
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||||||||||| |||| |||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||    
T  16875169 aggtaactaaaagtagtaattttttattgaaaaccaacaattgttgattaaaagctacatatttaatataaaaaacacaagtttcaagttaaagttacta 16875070  T
Q  101 ctttaaacttcttaa 115  Q
    |||||||||||||||    
T  16875069 ctttaaacttcttaa 16875055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 11610952 - 11611061
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactacttt 104  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||| ||||||||||| ||| ||||||||||    
T  11610952 aactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaacacaagttccaagtcaaagttactacttt 11611051  T
Q  105 aaacttctta 114  Q
    ||||||||||    
T  11611052 aaacttctta 11611061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 50364224 - 50364337
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    |||||||||||||||||||||| | |||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||| ||||||    
T  50364224 aggtaactaaaagtagtaacttataattgaaaaccaacaattattgattaaaagttacatatttaatataaaaaacacaagttccaagtcaaagttacta 50364323  T
Q  101 ctttaaacttctta 114  Q
    ||||||||||||||    
T  50364324 ctttaaacttctta 50364337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 13495327 - 13495441
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaaatttact 99  Q
    ||||||||||||||||||| |||| |||||||||||||||||||| ||| |||| |||||||||||||||||||  || ||||||||||| ||| |||||    
T  13495327 aggtaactaaaagtagtaattttttattgaaaatcaacaattatttattaaaaacctacatatttaatataaaatgcacaagttccaagtcaaaattact 13495426  T
Q  100 actttaaacttctta 114  Q
    |||||||||||||||    
T  13495427 actttaaacttctta 13495441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 20938090 - 20938204
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatat-aaaaaacataagttccaagttaaatttact 99  Q
    ||||||||||||||| |||||||| ||||||||  ||||||||||||||||||  |||||||||||||| |||||||| ||||||||||| ||| |||||    
T  20938090 aggtaactaaaagtaataactttttattgaaaactaacaattattgattaaaaattacatatttaatataaaaaaacacaagttccaagtcaaagttact 20938189  T
Q  100 actttaaacttctta 114  Q
    |||||||||||||||    
T  20938190 actttaaacttctta 20938204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 14 - 114
Target Start/End: Original strand, 29686367 - 29686467
Alignment:
Q  14 tagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactactttaaacttctt 113  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||| |||| |||||||||||||| |||||| |||||||| |||||||||||||||||||    
T  29686367 tagtaacttttcactgaatatcaacaattatttattaaaagctatatatgtaatataaaaaacacaagttctaagttaaagttactactttaaacttctt 29686466  T
Q  114 a 114  Q
    |    
T  29686467 a 29686467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 32553400 - 32553514
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    |||||| |||||||||||||||||||||||||||||| |||||||  |||||   |||||||||||||||||||||| ||||| ||| ||||| ||| ||    
T  32553400 aggtaattaaaagtagtaacttttcattgaaaatcaataattattagttaaatattacatatttaatataaaaaacacaagtttcaaattaaagttatta 32553499  T
Q  101 ctttaaacttcttaa 115  Q
     ||||||||||||||    
T  32553500 atttaaacttcttaa 32553514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 54621362 - 54621256
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    |||||| |||||||||||| |||||||| |||| |||||||||||||||||| | |||||||||||||||||||||| || |||||||| ||| ||||||    
T  54621362 aggtaattaaaagtagtaatttttcattaaaaaccaacaattattgattaaatgttacatatttaatataaaaaacacaacttccaagtcaaagttacta 54621263  T
Q  101 ctttaaa 107  Q
     ||||||    
T  54621262 atttaaa 54621256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 51339328 - 51339252
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaaca 77  Q
    |||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  51339328 aggtaactaaaaatagtaatttttcattgaaaaccaacaattattgattaaaagctacgtatttaatataaaaaaca 51339252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 40497085 - 40497194
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaag-ctacatatttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    |||||||||||||||||||| ||||||| |||||||||| | |||||||  ||||||| |||||||||||  || |||||| |||||||| |||||||||    
T  40497085 aactaaaagtagtaactttttattgaaa-tcaacaattaattattaaaaatctacatagttaatataaaatgcacaagttctaagttaaagttactactt 40497183  T
Q  104 taaacttctta 114  Q
    |||||||||||    
T  40497184 taaacttctta 40497194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 115
Target Start/End: Original strand, 38389486 - 38389595
Alignment:
Q  7 ctaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaaatttactacttta 105  Q
    ||||||||||||| |||| |||||||| ||| | ||||| ||||||| |||||||||||||||| |||  || ||||||||||| ||| |||| ||||||    
T  38389486 ctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaatgcacaagttccaagtcaaaattaccacttta 38389585  T
Q  106 aacttcttaa 115  Q
    ||||||||||    
T  38389586 aacttcttaa 38389595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 24978693 - 24978794
Alignment:
Q  14 tagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactactttaaacttctt 113  Q
    ||||||||||| ||||| || ||| |||||||||||||||  |||||||| ||| ||||||||| ||||| ||||| ||  | |||||||||||||| ||    
T  24978693 tagtaactttttattgagaaccaataattattgattaaaaattacatattaaatttaaaaaacacaagtttcaagtcaacgtaactactttaaacttgtt 24978792  T
Q  114 aa 115  Q
    ||    
T  24978793 aa 24978794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 30214150 - 30214098
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctac 58  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  30214150 aactaaaa-tagtaacttttcattgaaaatcaacaattatttattaaaagctac 30214098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 37055507 - 37055396
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    |||||||| |||||||||| |||||||||  |||||||||| ||||||| | |  ||| ||||||||||||||| ||||||| |   || ||||||| ||    
T  37055507 aactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagttttatagttaatataaaaaacacaagttccgatacaactttactattt 37055408  T
Q  104 taaacttcttaa 115  Q
    ||||||||||||    
T  37055407 taaacttcttaa 37055396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 36426504 - 36426439
Alignment:
Q  50 aaaagctacatatttaatataaaaaacataagttccaagttaaatttactactttaaacttcttaa 115  Q
    |||||||||||||||||||| |||  || ||||||||||| ||| |||| ||||||||||||||||    
T  36426504 aaaagctacatatttaatatgaaatgcacaagttccaagtcaaaattaccactttaaacttcttaa 36426439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 23523030 - 23523094
Alignment:
Q  51 aaagctacatatttaatataaaaaacataagttccaagttaaatttactactttaaacttcttaa 115  Q
    ||||||||||||||||||| |||  || ||||||||||| ||| |||| ||||||||||||||||    
T  23523030 aaagctacatatttaatatgaaatgcacaagttccaagtcaaaattaccactttaaacttcttaa 23523094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 35094989 - 35095092
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||||| ||||||||||||||||||| || || ||||   | ||||| |  ||||||||||||||| | |||| || |||| |||||||||||    
T  35094989 aggtaactaaaagcagtaacttttcattgaaaaacatcatttat---taaaaagttgtatatttaatataaaatatataaatttcaagataaatttacta 35095085  T
Q  101 ctttaaa 107  Q
     ||||||    
T  35095086 ttttaaa 35095092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 38786463 - 38786354
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactacttt 104  Q
    |||||||| |||||| |||| ||||||||| |||||||||| |||||||  |||| ||||| |||||||  || || || ||| | ||| |||||| |||    
T  38786463 aactaaaaatagtaattttttattgaaaat-aacaattatttattaaaaaatacacatttagtataaaatccacaaatttcaaatcaaaattactatttt 38786365  T
Q  105 aaacttcttaa 115  Q
    |||||||||||    
T  38786364 aaacttcttaa 38786354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 46845581 - 46845533
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa 53  Q
    |||||||||||| || |||| |||||||||||||||||||| |||||||    
T  46845581 aactaaaagtagaaattttttattgaaaatcaacaattatttattaaaa 46845533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 115
Target Start/End: Original strand, 7940838 - 7940940
Alignment:
Q  15 agtaacttttcattgaaaatcaac-aattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaaatttactactttaaacttct 112  Q
    |||||||||||||||||||   || ||||||| ||||||| | || ||||||||||||||| ||| ||||| ||||  |||||||| | |||||| ||||    
T  7940838 agtaacttttcattgaaaaaacactaattatttattaaaaagttatatatttaatataaaatacagaagttacaagacaaatttaccattttaaatttct 7940937  T
Q  113 taa 115  Q
    |||    
T  7940938 taa 7940940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 68 - 114
Target Start/End: Original strand, 41151734 - 41151780
Alignment:
Q  68 ataaaaaacataagttccaagttaaatttactactttaaacttctta 114  Q
    |||||||| | |||||||||||| || ||||||||||||||||||||    
T  41151734 ataaaaaatacaagttccaagttcaaattactactttaaacttctta 41151780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 53577007 - 53576925
Alignment:
Q  159 ttgctatttggtacgggttaaaaacaacgaaaaatgacggga-agaagaaacaagctgttacaga-ttttttatttaatatta 239  Q
    |||||||||||||||||  |||||| ||||||||  |||||| | ||||||||||| | || ||| |||||||||||||||||    
T  53577007 ttgctatttggtacgggagaaaaactacgaaaaactacgggagaaaagaaacaagccgctagagatttttttatttaatatta 53576925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 9710981 - 9711029
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa 53  Q
    |||||||| |||||| |||| |||||||| ||||||||||| |||||||    
T  9710981 aactaaaactagtaagtttttattgaaaaacaacaattattaattaaaa 9711029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 12 - 115
Target Start/End: Complemental strand, 23803180 - 23803076
Alignment:
Q  12 agtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaaatttactactttaaactt 110  Q
    |||||||||||||  ||||||| ||||||||||| ||| ||||| |  ||||||||||| ||| | | |||||||||   ||| || ||| |||||||||    
T  23803180 agtagtaactttttcttgaaaaacaacaattatttattcaaaagttttatatttaatatgaaatatacaagttccaatgcaaaatttctattttaaactt 23803081  T
Q  111 cttaa 115  Q
    |||||    
T  23803080 cttaa 23803076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 26486515 - 26486416
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaag-ctacatatttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    |||||||||||||| ||| | ||| ||||   ||||||||| |||||||  ||| ||||||||||||||| ||| ||||| ||| |||| ||||||| ||    
T  26486515 aactaaaagtagtagcttattattaaaaa---acaattatttattaaaaaactatatatttaatataaaatacacaagtttcaaattaattttactattt 26486419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 37444184 - 37444231
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa 53  Q
    |||||||||||||||||||| |||| ||||||||||||| | |||||||    
T  37444184 aactaaaagtagtaactttttattg-aaatcaacaattaattattaaaa 37444231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 49396472 - 49396528
Alignment:
Q  59 atatttaatataaaaaacataagttccaagttaaatttactactttaaacttcttaa 115  Q
    |||||||||||||||  ||||| ||  || | |||||||||||||||||||||||||    
T  49396472 atatttaatataaaatgcataaattttaattcaaatttactactttaaacttcttaa 49396528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 53537128 - 53537084
Alignment:
Q  9 aaaagtagtaacttttcattgaaaatcaacaattattgattaaaa 53  Q
    |||| |||||||||| ||||||||| ||||||||||| |||||||    
T  53537128 aaaaatagtaactttacattgaaaaacaacaattatttattaaaa 53537084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 3e-46; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 313783 - 313897
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  313783 aggtaactaaaagtagtaatttttgattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaagttccaagttaaagttacta 313882  T
Q  101 ctttaaacttcttaa 115  Q
    |||||||||||||||    
T  313883 ctttaaacttcttaa 313897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 44918058 - 44918172
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  44918058 aggtaactaaaagtagtaaatttttattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaaattaaagttacta 44918157  T
Q  101 ctttaaacttcttaa 115  Q
    ||||||| |||||||    
T  44918158 ctttaaatttcttaa 44918172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 6570120 - 6570015
Alignment:
Q  10 aaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactactttaaact 109  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  6570120 aaagtactaacttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaagttccaagttaaagttactactttaaact 6570021  T
Q  110 tcttaa 115  Q
    ||||||    
T  6570020 tcttaa 6570015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 8062238 - 8062352
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| || ||| ||||| ||||||    
T  8062238 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaaactatatatttaatataaaaaacataaatttcaaattaaagttacta 8062337  T
Q  101 ctttaaacttcttaa 115  Q
    |||||||||| ||||    
T  8062338 ctttaaactttttaa 8062352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 14 - 115
Target Start/End: Complemental strand, 30288995 - 30288894
Alignment:
Q  14 tagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactactttaaacttctt 113  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  30288995 tagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaagttccaagttaaaattactactttaaacttctt 30288896  T
Q  114 aa 115  Q
    ||    
T  30288895 aa 30288894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 17919491 - 17919600
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactacttt 104  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||| || |||||||| ||| ||||||||||    
T  17919491 aactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaacacaaattccaagtcaaagttactacttt 17919590  T
Q  105 aaacttctta 114  Q
    ||||||||||    
T  17919591 aaacttctta 17919600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 39150467 - 39150358
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactacttt 104  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||| || |||||||| ||| ||||||||||    
T  39150467 aactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaacacaaattccaagtcaaagttactacttt 39150368  T
Q  105 aaacttctta 114  Q
    ||||||||||    
T  39150367 aaacttctta 39150358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 39930943 - 39930832
Alignment:
Q  3 gtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactact 102  Q
    ||||||||||||||||| |||||||||||||  || ||||||| ||||||| |||||||| |||||||||||| | ||||| ||||||||| ||||||||    
T  39930943 gtaactaaaagtagtaatttttcattgaaaacaaataattatttattaaaaactacatatataatataaaaaatacaagtttcaagttaaagttactact 39930844  T
Q  103 ttaaacttctta 114  Q
    ||||||||||||    
T  39930843 ttaaacttctta 39930832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 32716307 - 32716195
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||| | ||||||||||| |||||||  ||||||||||||||||| | |||||||||||||||||||||| ||||||| | | ||| ||||||    
T  32716307 aggtaactaaatgaagtaacttttcgttgaaaacaaacaattattgattaaatgttacatatttaatataaaaaacacaagttcctaatcaaaattacta 32716208  T
Q  101 ctttaaacttctt 113  Q
    |||||||||||||    
T  32716207 ctttaaacttctt 32716195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 413 - 516
Target Start/End: Complemental strand, 38593932 - 38593826
Alignment:
Q  413 ttttattaggaaagaatcatgagttgttttagctgttgcgaataggatgagttt---aaggctgctggaagtggtgaaccatatgttgtaaaaaatctag 509  Q
    |||||||||||||||||||||||||||||  ||||||||||| |||||||||||   |||||||||| ||||||||  ||||||||||||||||| | ||    
T  38593932 ttttattaggaaagaatcatgagttgtttcggctgttgcgaagaggatgagtttcacaaggctgctgaaagtggtgggccatatgttgtaaaaaacccag 38593833  T
Q  510 caggtaa 516  Q
    |||||||    
T  38593832 caggtaa 38593826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 52833602 - 52833503
Alignment:
Q  15 agtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactactttaaacttctta 114  Q
    ||||| |||||||||||||  |||||||||| ||||||||||||||||||| |||||||| || || || ||||| ||| |||||| |||||||||||||    
T  52833602 agtaatttttcattgaaaacaaacaattatttattaaaagctacatatttattataaaaatcacaaatttcaagtcaaaattactattttaaacttctta 52833503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 115
Target Start/End: Original strand, 30171918 - 30172027
Alignment:
Q  7 ctaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaaatttactacttta 105  Q
    ||||||||||||| |||| |||||||| ||| | ||||| ||||||| |||||||||||||||| |||  || ||||||||||| ||| |||| ||||||    
T  30171918 ctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaatgcacaagttccaagtcaaagttaccacttta 30172017  T
Q  106 aacttcttaa 115  Q
    ||||||||||    
T  30172018 aacttcttaa 30172027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 115
Target Start/End: Original strand, 30187459 - 30187568
Alignment:
Q  7 ctaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaaatttactacttta 105  Q
    ||||||||||||| |||| |||||||| ||| | ||||| ||||||| |||||||||||||||| |||  || ||||||||||| ||| |||| ||||||    
T  30187459 ctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaatgcacaagttccaagtcaaagttaccacttta 30187558  T
Q  106 aacttcttaa 115  Q
    ||||||||||    
T  30187559 aacttcttaa 30187568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 6754509 - 6754618
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaag-ctacatatttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    |||||||| ||||||||||| |||||||  ||||||||| | |||||||  ||||||| |||||||||||  || ||||||||||| ||| |||||||||    
T  6754509 aactaaaaatagtaactttttattgaaac-caacaattaattattaaaaatctacataattaatataaaatgcacaagttccaagtcaaagttactactt 6754607  T
Q  104 taaacttctta 114  Q
    |||||||||||    
T  6754608 taaacttctta 6754618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 30363135 - 30363033
Alignment:
Q  6 actaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagc-tacatatttaatataaaaaacataagttccaagttaaatttactacttt 104  Q
    ||||||| ||||||||||| |||||||| ||||||||| | ||||||| | ||||||||||||||||||  || ||||||||||| ||| |||||| |||    
T  30363135 actaaaaatagtaactttttattgaaaaccaacaattaattattaaaaacctacatatttaatataaaatgcacaagttccaagtcaaagttactatttt 30363036  T
Q  105 aaa 107  Q
    |||    
T  30363035 aaa 30363033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 41624867 - 41624976
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaag-ctacatatttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    |||||||| ||||||||||| |||||||  ||||||||| | |||||||  ||||||| |||||||||||  || ||||||||||| ||| |||||||||    
T  41624867 aactaaaaatagtaactttttattgaaac-caacaattaattattaaaaatctacataattaatataaaatgcacaagttccaagtcaaagttactactt 41624965  T
Q  104 taaacttctta 114  Q
    |||||||||||    
T  41624966 taaacttctta 41624976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 10896446 - 10896501
Alignment:
Q  60 tatttaatataaaaaacataagttccaagttaaatttactactttaaacttcttaa 115  Q
    |||||||||||||||||| |||||| |||||||| |||||||||||||||||||||    
T  10896446 tatttaatataaaaaacacaagttcaaagttaaagttactactttaaacttcttaa 10896501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 115
Target Start/End: Complemental strand, 21854256 - 21854147
Alignment:
Q  7 ctaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaaatttactacttta 105  Q
    ||||||||||||| |||| |||||||| ||||| ||||| ||| ||||| ||| ||||||||||||||   | ||||||||||| ||| |||| ||||||    
T  21854256 ctaaaagtagtaatttttaattgaaaaacaacatttatttatttaaaagatacctatttaatataaaatgtacaagttccaagtcaaagttaccacttta 21854157  T
Q  106 aacttcttaa 115  Q
    ||||| ||||    
T  21854156 aactttttaa 21854147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 115
Target Start/End: Complemental strand, 31101071 - 31100963
Alignment:
Q  7 ctaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaaatttactacttta 105  Q
    ||||||||||||| ||||||||||||| ||||| ||||| ||||||| || |||||||||||||||||  || |||||  |||| ||| |||| ||||||    
T  31101071 ctaaaagtagtaa-ttttcattgaaaaacaacacttatttattaaaaagcaacatatttaatataaaatgcacaagttttaagtcaaagttaccacttta 31100973  T
Q  106 aacttcttaa 115  Q
    || |||||||    
T  31100972 aatttcttaa 31100963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 44007612 - 44007560
Alignment:
Q  63 ttaatataaaaaacataagttccaagttaaatttactactttaaacttcttaa 115  Q
    ||||||||||||||| ||||||||||||||| || ||||||||||||||||||    
T  44007612 ttaatataaaaaacacaagttccaagttaaagttgctactttaaacttcttaa 44007560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 51382405 - 51382449
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattatt 45  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  51382405 aggtaactaaaagtagtaacttttcattgaaaaccaacaattatt 51382449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 107
Target Start/End: Original strand, 3096292 - 3096349
Alignment:
Q  50 aaaagctacatatttaatataaaaaacataagttccaagttaaatttactactttaaa 107  Q
    |||| |||||||||||||||||||||||||||||  |||||||| ||| |||||||||    
T  3096292 aaaatctacatatttaatataaaaaacataagttttaagttaaaattattactttaaa 3096349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 9516628 - 9516697
Alignment:
Q  15 agtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagtt 83  Q
    ||||||||||||||||||| || |||||||| ||| ||||| || ||||||||||||||| ||| |||||    
T  9516628 agtaacttttcattgaaaaacaccaattatttattaaaaagttatatatttaatataaaatacacaagtt 9516697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 5 - 113
Target Start/End: Complemental strand, 39627712 - 39627603
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    |||||||| ||| ||||||| |||||||| ||||||| | | ||| ||||| ||||||||||||||||||  || ||||| |||   |||||||||| ||    
T  39627712 aactaaaaatagcaacttttaattgaaaaacaacaatcacttattgaaaagttacatatttaatataaaatgcacaagttacaatacaaatttactattt 39627613  T
Q  104 taaacttctt 113  Q
    | ||||||||    
T  39627612 tgaacttctt 39627603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 36490819 - 36490927
Alignment:
Q  8 taaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaaatttactactttaa 106  Q
    |||||||||||| |||| |||||||| ||||||||||| ||| ||||| || ||||| |||| ||||   | |||||||||   ||| |||||| |||||    
T  36490819 taaaagtagtaagtttttattgaaaaacaacaattatttattaaaaagttatatattaaatacaaaatgtacaagttccaatgcaaagttactattttaa 36490918  T
Q  107 acttcttaa 115  Q
    |||||||||    
T  36490919 acttcttaa 36490927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 43671743 - 43671795
Alignment:
Q  21 ttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaa 73  Q
    |||| ||| |||||||||||||||| |||||||| || |||||||||||||||    
T  43671743 tttttatttaaaatcaacaattatttattaaaagttatatatttaatataaaa 43671795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 2222375 - 2222311
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatat 69  Q
    |||||||||||||||||||| |||||||| ||| ||||||| ||| ||||||||  ||||||||||    
T  2222375 aactaaaagtagtaactttt-attgaaaaacaataattatttattaaaaagctaactatttaatat 2222311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 21391994 - 21391929
Alignment:
Q  50 aaaagctacatatttaatataaaaaacataagttccaagttaaatttactactttaaacttcttaa 115  Q
    |||| ||| |||||| |||||||| ||| |||||| |||  ||| |||||||||||||||||||||    
T  21391994 aaaaactaaatattttatataaaatacacaagttctaagccaaagttactactttaaacttcttaa 21391929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 23591735 - 23591804
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaa 73  Q
    |||||||| |||||| |||| |||||||||||| ||||||| ||| ||||| || |||||||||| ||||    
T  23591735 aactaaaattagtaagtttttattgaaaatcaataattatttattaaaaagttatatatttaatacaaaa 23591804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 115
Target Start/End: Original strand, 34802007 - 34802115
Alignment:
Q  7 ctaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaaatttactacttta 105  Q
    ||||||||||||| |||| |||||||| ||| | ||||| ||| |||| ||||||||||||||| |||  || ||||||| ||  ||| |||| | ||||    
T  34802007 ctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaaactacatatttaatatgaaatgcacaagttcc-agacaaaattaccatttta 34802105  T
Q  106 aacttcttaa 115  Q
    ||||||||||    
T  34802106 aacttcttaa 34802115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 24669019 - 24669075
Alignment:
Q  59 atatttaatataaaaaacataagttccaagttaaatttactactttaaacttcttaa 115  Q
    |||||||||||||||  ||||||||  ||  ||||||||||| ||||||||||||||    
T  24669019 atatttaatataaaatgcataagttataatataaatttactattttaaacttcttaa 24669075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 52337858 - 52337914
Alignment:
Q  59 atatttaatataaaaaacataagttccaagttaaatttactactttaaacttcttaa 115  Q
    ||||||||||||||| ||||||||| |||   | |||||||| ||||||||||||||    
T  52337858 atatttaatataaaatacataagttgcaatgcatatttactattttaaacttcttaa 52337914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 91; Significance: 8e-44; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 52923 - 52809
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||| ||||||||||| ||| ||||||    
T  52923 aggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagttacatatttaatacaaaaaacacaagttccaagtcaaagttacta 52824  T
Q  101 ctttaaacttcttaa 115  Q
    |||||||||||||||    
T  52823 ctttaaacttcttaa 52809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 91; Significance: 8e-44; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 145711 - 145825
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||| ||||||||||| ||| ||||||    
T  145711 aggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagttacatatttaatacaaaaaacacaagttccaagtcaaagttacta 145810  T
Q  101 ctttaaacttcttaa 115  Q
    |||||||||||||||    
T  145811 ctttaaacttcttaa 145825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 83; Significance: 5e-39; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 13119 - 13233
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| || |||||| ||||| ||||||    
T  13119 aggtaactaaaagtagtaatttttcattgaaaaccaacaattgttgattaaaagctacatatttaatataaaaaacacaaattccaaattaaagttacta 13218  T
Q  101 ctttaaacttcttaa 115  Q
     ||||||||||||||    
T  13219 ttttaaacttcttaa 13233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 5e-39; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 48910946 - 48910832
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||| || |||| ||||||| ||||||    
T  48910946 aggtaactaaaagtagtaattttttattgaaaattaacaattattgattaaaagctacatatttaacataaaaaacacaaattcctagttaaagttacta 48910847  T
Q  101 ctttaaacttcttaa 115  Q
    |||||||||||||||    
T  48910846 ctttaaacttcttaa 48910832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 41415697 - 41415592
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactacttt 104  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| || || ||||| ||| ||||||||||    
T  41415697 aactaaaagtagtaacttttaattgaaaatcaacaattatttattaaaagctacatatttaatataaaaaacacaaatttcaagtcaaagttactacttt 41415598  T
Q  105 aaactt 110  Q
    ||||||    
T  41415597 aaactt 41415592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 36000084 - 35999977
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||       ||||||||| ||||||    
T  36000084 aggtaactaaaagtagtaactttttattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaaca-------caagttaaagttacta 35999992  T
Q  101 ctttaaacttcttaa 115  Q
    |||||||||||||||    
T  35999991 ctttaaacttcttaa 35999977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 29190960 - 29190846
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttacta 100  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||| | | |||||||||||| ||||||| ||||||||||| ||| ||||||    
T  29190960 aggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaatgttgcatatttaatattaaaaacacaagttccaagtcaaagttacta 29190861  T
Q  101 ctttaaacttcttaa 115  Q
     ||||||||||||||    
T  29190860 atttaaacttcttaa 29190846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 53961358 - 53961470
Alignment:
Q  3 gtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactact 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||| | |||||||||||||||||||||| || || ||||| ||| |||||| |    
T  53961358 gtaactaaaagtagtaatttttcattgaaaatcaacaattattgtttaaatgttacatatttaatataaaaaacacaaatttcaagtcaaaattactaat 53961457  T
Q  103 ttaaacttcttaa 115  Q
    |||||||||||||    
T  53961458 ttaaacttcttaa 53961470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 7349726 - 7349835
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactacttt 104  Q
    ||||||||||| ||||||||||||||||| |||||||||||  ||||||| |||||||||||||||||||||| |||||  |||| ||| ||||||||||    
T  7349726 aactaaaagtaataacttttcattgaaaaccaacaattatttgttaaaagttacatatttaatataaaaaacacaagttttaagtcaaagttactacttt 7349825  T
Q  105 aaacttctta 114  Q
    ||||||||||    
T  7349826 aaacttctta 7349835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 4329630 - 4329742
Alignment:
Q  3 gtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactact 102  Q
    |||| |||||||||||| |||| |||||||| |||| ||||||||||||||| ||||||||||||||||||||||||| || ||||| ||| ||||||||    
T  4329630 gtaattaaaagtagtaatttttaattgaaaaccaacgattattgattaaaagttacatatttaatataaaaaacataaatttcaagtcaaagttactact 4329729  T
Q  103 ttaaacttcttaa 115  Q
    |||||||| ||||    
T  4329730 ttaaactttttaa 4329742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 10389410 - 10389310
Alignment:
Q  3 gtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactact 102  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||| |||||| |||| ||| ||||||||    
T  10389410 gtaactaaaagtattaacttttaattgaaaaccaacaattattgattaaaagttacatatttcatataaaaaacacaagttctaagtcaaaattactact 10389311  T
Q  103 t 103  Q
    |    
T  10389310 t 10389310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 23553603 - 23553718
Alignment:
Q  1 aggtaactaaaagtagtaacttttc-attgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttact 99  Q
    |||||||||||| |||||| ||||  |||||||| ||||||||||||||||||| ||||||||||||||||||||| | || ||  |||||||| |||||    
T  23553603 aggtaactaaaaatagtaatttttttattgaaaaccaacaattattgattaaaaactacatatttaatataaaaaatacaaattttaagttaaagttact 23553702  T
Q  100 actttaaacttcttaa 115  Q
    ||||||||||| ||||    
T  23553703 actttaaactttttaa 23553718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 7 - 115
Target Start/End: Complemental strand, 16667523 - 16667414
Alignment:
Q  7 ctaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaaatttactacttta 105  Q
    ||||||||||||| ||||||||||||| ||||| ||||| ||||||| |||||||||||||||||||| ||| ||||| ||||||||| |||  | ||||    
T  16667523 ctaaaagtagtaatttttcattgaaaaacaacacttatttattaaaaagctacatatttaatataaaatacacaagtttcaagttaaaattatcatttta 16667424  T
Q  106 aacttcttaa 115  Q
    ||||||||||    
T  16667423 aacttcttaa 16667414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 49228390 - 49228457
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaata 68  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||| | |||||||||||||    
T  49228390 aggtaactaaaagtagtaacttttcattgaaaaccaacaattgttgattaaatgttacatatttaata 49228457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 115
Target Start/End: Complemental strand, 47327031 - 47326922
Alignment:
Q  7 ctaaaagtagtaacttttcattgaaaatcaacaattattgattaaaag-ctacatatttaatataaaaaacataagttccaagttaaatttactacttta 105  Q
    ||||||||||||| ||||||||||||| ||| | ||||| |||||||  ||||||||||||||| |||  || ||||||||||| ||| |||| ||||||    
T  47327031 ctaaaagtagtaatttttcattgaaaaacaaaacttatttattaaaaaactacatatttaatatgaaatgcaaaagttccaagtcaaagttaccacttta 47326932  T
Q  106 aacttcttaa 115  Q
    ||||||||||    
T  47326931 aacttcttaa 47326922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 115
Target Start/End: Complemental strand, 47341827 - 47341718
Alignment:
Q  7 ctaaaagtagtaacttttcattgaaaatcaacaattattgattaaaag-ctacatatttaatataaaaaacataagttccaagttaaatttactacttta 105  Q
    ||||||||||||| ||||||||||||| ||| | ||||| |||||||  ||||||||||||||| |||  || ||||||||||| ||| |||| ||||||    
T  47341827 ctaaaagtagtaatttttcattgaaaaacaaaacttatttattaaaaaactacatatttaatatgaaatgcaaaagttccaagtcaaagttaccacttta 47341728  T
Q  106 aacttcttaa 115  Q
    ||||||||||    
T  47341727 aacttcttaa 47341718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 115
Target Start/End: Complemental strand, 54495776 - 54495667
Alignment:
Q  7 ctaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaaatttactacttta 105  Q
    ||||||||||||| ||||  ||||||| ||| | ||||| ||||||| |||||||||||||||| |||  || ||||||||||||||| |||| ||||||    
T  54495776 ctaaaagtagtaatttttttttgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaatgcacaagttccaagttaaagttaccacttta 54495677  T
Q  106 aacttcttaa 115  Q
    ||||||||||    
T  54495676 aacttcttaa 54495667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 10813635 - 10813529
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacata-tttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    ||||||||||| |||||||| |||||||| |||||||||||  ||||||| |||||| |||||| ||||||||| || ||  |||| ||| |||||||||    
T  10813635 aactaaaagtaataactttttattgaaaaccaacaattatttgttaaaagttacatattttaatttaaaaaacacaaattttaagtcaaagttactactt 10813536  T
Q  104 taaactt 110  Q
    |||||||    
T  10813535 taaactt 10813529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 23051490 - 23051413
Alignment:
Q  37 acaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactactttaaacttctta 114  Q
    ||||||||| |||||||| ||||||||| |||||||||||| ||||| ||||| ||| ||||||||||||| ||||||    
T  23051490 acaattatttattaaaagttacatattttatataaaaaacacaagtttcaagtcaaagttactactttaaatttctta 23051413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 49650244 - 49650319
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaac 76  Q
    ||||||||||||| |||||||||||||| ||||  |||||||||||| |||| | ||||| |||||||||||||||    
T  49650244 aggtaactaaaagaagtaacttttcattaaaaacaaacaattattgaataaatgttacatgtttaatataaaaaac 49650319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 115
Target Start/End: Original strand, 27362430 - 27362539
Alignment:
Q  7 ctaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaaatttactacttta 105  Q
    ||||||||||||| |||| |||||||| ||| | ||||| || |||| |||||||||||||||| |||  || || |||||||| ||| |||| ||||||    
T  27362430 ctaaaagtagtaattttttattgaaaaacaaaacttatttatcaaaaagctacatatttaatatgaaatgcacaaattccaagtcaaaattaccacttta 27362529  T
Q  106 aacttcttaa 115  Q
    ||||||||||    
T  27362530 aacttcttaa 27362539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 49181109 - 49181220
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    |||||||||||| ||| ||| |||||||| ||||||| ||| ||| ||||| ||||||||||||||||||  || ||||| |||   |||||||||| ||    
T  49181109 aactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaagttacatatttaatataaaatgcacaagttacaatacaaatttactattt 49181208  T
Q  104 taaacttcttaa 115  Q
    | ||||||||||    
T  49181209 tgaacttcttaa 49181220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 37785001 - 37784890
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    |||||||||||| ||||||| |||||||| ||| ||| ||| ||| ||||| ||||||||||| ||||||  || || || |||  ||||||||||| ||    
T  37785001 aactaaaagtagcaactttttattgaaaaacaataatcatttattaaaaagttacatatttaacataaaatgcacaaattacaatataaatttactattt 37784902  T
Q  104 taaacttcttaa 115  Q
    | ||||||||||    
T  37784901 tgaacttcttaa 37784890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 7 - 115
Target Start/End: Complemental strand, 8736949 - 8736841
Alignment:
Q  7 ctaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaaatttactacttta 105  Q
    ||||||||||||| |||| |||||||| ||| | ||||| ||| ||||| |||||||||||||| |||  ||  |||||||||| ||| |||| ||||||    
T  8736949 ctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagttacatatttaatatgaaatgca-cagttccaagtcaaagttaccacttta 8736851  T
Q  106 aacttcttaa 115  Q
    || |||||||    
T  8736850 aatttcttaa 8736841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 39539510 - 39539607
Alignment:
Q  14 tagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaaatttactactttaaactt 110  Q
    |||||| ||||||||||||| ||||| ||||| ||| |||||||||||||||||||| |||  || ||||| ||||| | | |||| | |||||||||    
T  39539510 tagtaatttttcattgaaaaacaacacttatttattaaaaagctacatatttaatatgaaattcacaagtttcaagtcatagttaccattttaaactt 39539607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 49228754 - 49228802
Alignment:
Q  67 tataaaaaacataagttccaagttaaatttactactttaaacttcttaa 115  Q
    ||||||||||| ||||||||||| ||| |||||| ||||||||||||||    
T  49228754 tataaaaaacacaagttccaagtcaaagttactaatttaaacttcttaa 49228802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 2096908 - 2096991
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaa 87  Q
    ||||||||||   ||||||| |||||||| ||||||||||| ||| ||||| || |||||||||||||||  || |||||||||    
T  2096908 aactaaaagtgacaactttttattgaaaaacaacaattatttattaaaaagttatatatttaatataaaatgcacaagttccaa 2096991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 34941311 - 34941425
Alignment:
Q  1 aggtaactaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaaatttact 99  Q
    |||||||||||||||  ||||||| |||||||| |||||| |||| ||| ||||| || ||||| |||| ||||   | |||||||||   ||| |||||    
T  34941311 aggtaactaaaagtaacaactttttattgaaaaacaacaactatttattaaaaagttatatattaaatacaaaatgtacaagttccaatgcaaaattact 34941410  T
Q  100 actttaaacttctta 114  Q
    | |||||||||||||    
T  34941411 attttaaacttctta 34941425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 23438193 - 23438242
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaag 54  Q
    ||||||| |||||||||||| |||||||| ||||||| ||| ||||||||    
T  23438193 aactaaatgtagtaactttttattgaaaaacaacaataatttattaaaag 23438242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 52391334 - 52391446
Alignment:
Q  4 taactaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaaatttactact 102  Q
    ||||||| |||||||||||||  ||||||| ||||||||||| ||| ||||| |  ||||||||||| |||   | |||||||||   ||| || ||| |    
T  52391334 taactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaagttttatatttaatattaaatgtacaagttccaatacaaaatttctatt 52391433  T
Q  103 ttaaacttcttaa 115  Q
    |||||||||||||    
T  52391434 ttaaacttcttaa 52391446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 3556 - 3443
Alignment:
Q  3 gtaactaaaagtagtaactttt-cattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactac 101  Q
    |||||||||||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| | |||||    
T  3556 gtaactaaaagtagtaactttttcattaaaaaccaacaattattgattaaaagttacatatttaatataaaaaacataagttccaatttaaagtaactac 3457  T
Q  102 tttaaacttcttaa 115  Q
    ||||||||||||||    
T  3456 tttaaacttcttaa 3443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 5724 - 5839
Alignment:
Q  1 aggtaactaaaagtagtaacttttc-attgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttact 99  Q
    |||||||||||| |||||| ||||  |||||||| ||||||||||||||||||| ||||||||||||||||||||| | || ||  |||||||| |||||    
T  5724 aggtaactaaaaatagtaatttttttattgaaaaccaacaattattgattaaaaactacatatttaatataaaaaatacaaattttaagttaaagttact 5823  T
Q  100 actttaaacttcttaa 115  Q
    ||||||||||| ||||    
T  5824 actttaaactttttaa 5839  T

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Target: scaffold0009 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 43503 - 43602
Alignment:
Q  8 taaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactactttaaa 107  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||| || ||||||||||||||||| |||||||  |||||||| ||| | |||||||    
T  43503 taaaagtagtaatttttcattgaaaatcaacaattattaattaaaagttatatatttaatataaaaaatataagttttaagttaaagttattgctttaaa 43602  T

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Target: scaffold0018 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 182079 - 182190
Alignment:
Q  3 gtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaatttactact 102  Q
    ||||| ||||||||||| |||| ||||||||  |||||||||| |||||||| |||||||||||||||||||||| ||||| |||  | ||  |||||||    
T  182079 gtaaccaaaagtagtaattttttattgaaaacaaacaattatttattaaaagttacatatttaatataaaaaacacaagtttcaa-atcaacgtactact 182177  T
Q  103 ttaaacttcttaa 115  Q
    |||||||||||||    
T  182178 ttaaacttcttaa 182190  T

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Target: scaffold0111 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 7 - 115
Target Start/End: Complemental strand, 37253 - 37144
Alignment:
Q  7 ctaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaaatttactacttta 105  Q
    ||||||||||||| |||| |||||||| ||| | ||||| ||||||| |||||||||||||||| |||  || ||||||||||| ||| |||  ||||||    
T  37253 ctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaatgcacaagttccaagtcaaagttatcacttta 37154  T
Q  106 aacttcttaa 115  Q
    ||||||||||    
T  37153 aacttcttaa 37144  T

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Target: scaffold0618 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 115
Target Start/End: Complemental strand, 8550 - 8444
Alignment:
Q  9 aaaagtagtaacttttcattgaaaatcaacaattattgattaaaag-ctacatatttaatataaaaaacataagttccaagttaaatttactactttaaa 107  Q
    ||||||| ||| |||| |||||||| ||||||||||| |||||||  ||||| |||||||||||||  || |||||| || | ||| |||||||||||||    
T  8550 aaaagtattaattttttattgaaaa-caacaattatttattaaaaaactacaaatttaatataaaatgcacaagttctaaatcaaagttactactttaaa 8452  T
Q  108 cttcttaa 115  Q
     |||||||    
T  8451 tttcttaa 8444  T

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Target: scaffold0036 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 94159 - 94048
Alignment:
Q  5 aactaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaaatttactactt 103  Q
    ||||||||||||||| |||| ||||||||  || ||||||| ||| |||| ||| |||||||||| ||||   |||||||||||  |||| ||| || ||    
T  94159 aactaaaagtagtaagtttttattgaaaactaataattatttattaaaaaactatatatttaatacaaaatgtataagttccaatgtaaagttagtattt 94060  T
Q  104 taaacttcttaa 115  Q
     |||||||||||    
T  94059 aaaacttcttaa 94048  T

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Target: scaffold0305 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 18134 - 18068
Alignment:
Q  8 taaaagtagtaacttttcattgaaaatcaacaattattgatta-aaagctacatatttaatataaaa 73  Q
    |||||||||||||| || ||| |||| ||||||||||| |||| |||| || |||||||||||||||    
T  18134 taaaagtagtaactcttaattaaaaaacaacaattatttattagaaagttatatatttaatataaaa 18068  T

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