View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2836_high_15 (Length: 227)
Name: NF2836_high_15
Description: NF2836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2836_high_15 |
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Alignment Details
Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 19 - 213
Target Start/End: Original strand, 40053548 - 40053742
Alignment:
| Q |
19 |
cataggtgggactaccctgaaattcttttgacccagcaaatcgatggacacttttctcacatgctcatacatttggtcatcattaactgtgggagggtaa |
118 |
Q |
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| T |
40053548 |
cataggtgggactaccctgaaattcttttgacccagcaaatcgatggacacttttttcacatgctcatacatttggtcatcattaaccgtgggagggtaa |
40053647 |
T |
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| Q |
119 |
atagtgtactccttttcaaagaagtcaacttctgcaaagcaactgtaaacactagcctgttgcacaattacctgttcaagagttgggacaatagt |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40053648 |
atagtgtactccttttcaaagaagtcaacttctgcaaagcaactgtaaacactagcctgttgcacaattacctgttcaagagttgggacaatagt |
40053742 |
T |
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