View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2836_low_11 (Length: 339)
Name: NF2836_low_11
Description: NF2836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2836_low_11 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 288; Significance: 1e-161; HSPs: 15)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 1 - 332
Target Start/End: Complemental strand, 38453233 - 38452902
Alignment:
| Q |
1 |
cggagacaataaaatcatcaccgtcgatcgtaatatcaacttctccgacctcatggcaaagctttccacgttcatgttttccgatgtttgcttcaagtat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
38453233 |
cggagacaataaaatcatcaccgtcgatcgtaatatcaacttctccgacctcatggcaaagctttccatattcatgttttccgatgtttgcttcaagtat |
38453134 |
T |
 |
| Q |
101 |
caactccttggtgaagattttgatgctttgatcccggtttataacgaagaagatctcaatcatatgatgttcgagtatgatcgtatgtgtcacttttcac |
200 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
38453133 |
caactccttggtgaagatttcgatgctttgatcccggtttataacgaagaagatctcaatcatatgatgttagagtatgatcatatgtgtcacttttcac |
38453034 |
T |
 |
| Q |
201 |
gaaagcctgcatggctgagggtcttcctcttccctgtccctgttaacaacaacaaggcatcttttgattctttggcttccgtcgaatcgctcaattccgt |
300 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
38453033 |
gaaagcctgcatggttgagggtcttcctcttccctgtccttgttaacaacaacaaggcatcttttgattctttaacttccgtcgactcgctcaattccgt |
38452934 |
T |
 |
| Q |
301 |
tcatgtttctccttttgaagaatattcatctc |
332 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |
|
|
| T |
38452933 |
tcaagtttctccttttgaagaatattcatctc |
38452902 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 2 - 332
Target Start/End: Original strand, 38169678 - 38170008
Alignment:
| Q |
2 |
ggagacaataaaatcatcaccgtcgatcgtaatatcaacttctccgacctcatggcaaagctttccacgttcatgttttccgatgtttgcttcaagtatc |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38169678 |
ggagacaataaaatcatcaccgtcgatcgtaatatcaacttctctgacctcatggcaaagctttccacgttcatgttttccgatgtttgcttcaagtatc |
38169777 |
T |
 |
| Q |
102 |
aactccttggtgaagattttgatgctttgatcccggtttataacgaagaagatctcaatcatatgatgttcgagtatgatcgtatgtgtcacttttcacg |
201 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
38169778 |
aactccttggtgaagatttcgatgctttgatcccaatttataacgaagaagatctcaatcatattatgttcgagtatgatcgtatgtgtcacttttcacg |
38169877 |
T |
 |
| Q |
202 |
aaagcctgcatggctgagggtcttcctcttccctgtccctgttaacaacaacaaggcatcttttgattctttggcttccgtcgaatcgctcaattccgtt |
301 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |
|
|
| T |
38169878 |
aaagcctgcatggctgagggtcttcctcttcccggtccctattaacaacaacaaggcatcttttgattctttggcttccgtcaaatcgctcaatttcgtt |
38169977 |
T |
 |
| Q |
302 |
catgtttctccttttgaagaatattcatctc |
332 |
Q |
| |
|
| |||||||||||||||||||||||||||| |
|
|
| T |
38169978 |
cgagtttctccttttgaagaatattcatctc |
38170008 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 2 - 332
Target Start/End: Complemental strand, 38182922 - 38182592
Alignment:
| Q |
2 |
ggagacaataaaatcatcaccgtcgatcgtaatatcaacttctccgacctcatggcaaagctttccacgttcatgttttccgatgtttgcttcaagtatc |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38182922 |
ggagacaataaaatcatcaccgtcgatcgtaatatcaacttctctgacctcatggcaaagctttccacgttcatgttttccgatgtttgcttcaagtatc |
38182823 |
T |
 |
| Q |
102 |
aactccttggtgaagattttgatgctttgatcccggtttataacgaagaagatctcaatcatatgatgttcgagtatgatcgtatgtgtcacttttcacg |
201 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
38182822 |
aactacttggtgaagatttggatgctttgatcccagtttataacgaagaagatctcaatcatatgatgttcgagtatgatcgtatgtgtcgcttttcaca |
38182723 |
T |
 |
| Q |
202 |
aaagcctgcatggctgagggtcttcctcttccctgtccctgttaacaacaacaaggcatcttttgattctttggcttccgtcgaatcgctcaattccgtt |
301 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
38182722 |
aaagcctgcatggttgagggtcttcctcttcccggtccctattaacaacaacaaggcatcttttgattctttggcttccgtcgactcgctcaattccgtt |
38182623 |
T |
 |
| Q |
302 |
catgtttctccttttgaagaatattcatctc |
332 |
Q |
| |
|
|| |||| ||||||||||||||||||||||| |
|
|
| T |
38182622 |
caagtttttccttttgaagaatattcatctc |
38182592 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 2 - 332
Target Start/End: Original strand, 38188209 - 38188539
Alignment:
| Q |
2 |
ggagacaataaaatcatcaccgtcgatcgtaatatcaacttctccgacctcatggcaaagctttccacgttcatgttttccgatgtttgcttcaagtatc |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38188209 |
ggagacaataaaatcatcaccgtcgatcgtaatatcaacttctctgacctcatggcaaagctttccacgttcatgttttccgatgtttgcttcaagtatc |
38188308 |
T |
 |
| Q |
102 |
aactccttggtgaagattttgatgctttgatcccggtttataacgaagaagatctcaatcatatgatgttcgagtatgatcgtatgtgtcacttttcacg |
201 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
38188309 |
aactacttggtgaagatttggatgctttgatcccagtttataacgaagaagatctcaatcatatgatgttcgagtatgatcgtatgtgtcgcttttcaca |
38188408 |
T |
 |
| Q |
202 |
aaagcctgcatggctgagggtcttcctcttccctgtccctgttaacaacaacaaggcatcttttgattctttggcttccgtcgaatcgctcaattccgtt |
301 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
38188409 |
aaagcctgcatggttgagggtcttcctcttcccggtccctattaacaacaacaaggcatcttttgattctttggcttccgtcgactcgctcaattccgtt |
38188508 |
T |
 |
| Q |
302 |
catgtttctccttttgaagaatattcatctc |
332 |
Q |
| |
|
|| |||| ||||||||||||||||||||||| |
|
|
| T |
38188509 |
caagtttttccttttgaagaatattcatctc |
38188539 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 2 - 332
Target Start/End: Complemental strand, 38210148 - 38209818
Alignment:
| Q |
2 |
ggagacaataaaatcatcaccgtcgatcgtaatatcaacttctccgacctcatggcaaagctttccacgttcatgttttccgatgtttgcttcaagtatc |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38210148 |
ggagacaataaaatcatcaccgtcgatcgtaatatcaacttctctgacctcatggcaaagctttccacgttcatgttttccgatgtttgcttcaagtatc |
38210049 |
T |
 |
| Q |
102 |
aactccttggtgaagattttgatgctttgatcccggtttataacgaagaagatctcaatcatatgatgttcgagtatgatcgtatgtgtcacttttcacg |
201 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
38210048 |
aactacttggtgaagatttggatgctttgatcccagtttataacgaagaagatctcaatcatatgatgttcgagtatgatcgtatgtgtcgcttttcaca |
38209949 |
T |
 |
| Q |
202 |
aaagcctgcatggctgagggtcttcctcttccctgtccctgttaacaacaacaaggcatcttttgattctttggcttccgtcgaatcgctcaattccgtt |
301 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
38209948 |
aaagcctgcatggttgagggtcttcctcttcccggtccctattaacaacaacaaggcatcttttgattctttggcttccgtcgactcgctcaattccgtt |
38209849 |
T |
 |
| Q |
302 |
catgtttctccttttgaagaatattcatctc |
332 |
Q |
| |
|
|| |||| ||||||||||||||||||||||| |
|
|
| T |
38209848 |
caagtttttccttttgaagaatattcatctc |
38209818 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 2 - 332
Target Start/End: Original strand, 38215434 - 38215764
Alignment:
| Q |
2 |
ggagacaataaaatcatcaccgtcgatcgtaatatcaacttctccgacctcatggcaaagctttccacgttcatgttttccgatgtttgcttcaagtatc |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
38215434 |
ggagacaataaaatcatcaccgtcgatcgtaatatcaacttctctgacctcatggcaaagctttccacgttcatgttttccgatgtttgtttcaagtatc |
38215533 |
T |
 |
| Q |
102 |
aactccttggtgaagattttgatgctttgatcccggtttataacgaagaagatctcaatcatatgatgttcgagtatgatcgtatgtgtcacttttcacg |
201 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
38215534 |
aactccttggtgaagatttggatgctttgatcccagtttataacgaagaagatctcaatcatatgatgttcgagtatgatcgtatgtgtcgcttttcaca |
38215633 |
T |
 |
| Q |
202 |
aaagcctgcatggctgagggtcttcctcttccctgtccctgttaacaacaacaaggcatcttttgattctttggcttccgtcgaatcgctcaattccgtt |
301 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
38215634 |
aaagcctgcatggttgagggtcttcctcttcccggtccctattaacaacaacaaggcatcttttgattctttggcttccgtcgactcgctcaattccgtt |
38215733 |
T |
 |
| Q |
302 |
catgtttctccttttgaagaatattcatctc |
332 |
Q |
| |
|
|| |||| ||||||||||||||||||||||| |
|
|
| T |
38215734 |
caagtttttccttttgaagaatattcatctc |
38215764 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 1 - 332
Target Start/End: Original strand, 38185466 - 38185797
Alignment:
| Q |
1 |
cggagacaataaaatcatcaccgtcgatcgtaatatcaacttctccgacctcatggcaaagctttccacgttcatgttttccgatgtttgcttcaagtat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38185466 |
cggagacaataaaatcatcaccgtcgatcgtaatatcaacttctctgacctcatggcaaagctttccacgttcatgttttccgatgtttgcttcaagtat |
38185565 |
T |
 |
| Q |
101 |
caactccttggtgaagattttgatgctttgatcccggtttataacgaagaagatctcaatcatatgatgttcgagtatgatcgtatgtgtcacttttcac |
200 |
Q |
| |
|
||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
38185566 |
caactacttggtgaagatttggatgctttgatcccagtttataacgaagaagatctcaatcatatgatgttcgagtatgatcgtatgtgtcgcttttcac |
38185665 |
T |
 |
| Q |
201 |
gaaagcctgcatggctgagggtcttcctcttccctgtccctgttaacaacaacaaggcatcttttgattctttggcttccgtcgaatcgctcaattccgt |
300 |
Q |
| |
|
||||||||||||| |||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
38185666 |
aaaagcctgcatggttgagagtcttcctcttcccggtccctattaacaacaacaaggcatcttttgattctttggcttccgtcgactcgctcaattccgt |
38185765 |
T |
 |
| Q |
301 |
tcatgtttctccttttgaagaatattcatctc |
332 |
Q |
| |
|
||| |||| ||||||||||||||||||||||| |
|
|
| T |
38185766 |
tcaagtttttccttttgaagaatattcatctc |
38185797 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 1 - 332
Target Start/End: Complemental strand, 38212891 - 38212560
Alignment:
| Q |
1 |
cggagacaataaaatcatcaccgtcgatcgtaatatcaacttctccgacctcatggcaaagctttccacgttcatgttttccgatgtttgcttcaagtat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38212891 |
cggagacaataaaatcatcaccgtcgatcgtaatatcaacttctctgacctcatggcaaagctttccacgttcatgttttccgatgtttgcttcaagtat |
38212792 |
T |
 |
| Q |
101 |
caactccttggtgaagattttgatgctttgatcccggtttataacgaagaagatctcaatcatatgatgttcgagtatgatcgtatgtgtcacttttcac |
200 |
Q |
| |
|
||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
38212791 |
caactacttggtgaagatttggatgctttgatcccagtttataacgaagaagatctcaatcatatgatgttcgagtatgatcgtatgtgtcgcttttcac |
38212692 |
T |
 |
| Q |
201 |
gaaagcctgcatggctgagggtcttcctcttccctgtccctgttaacaacaacaaggcatcttttgattctttggcttccgtcgaatcgctcaattccgt |
300 |
Q |
| |
|
||||||||||||| |||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
38212691 |
aaaagcctgcatggttgagagtcttcctcttcccggtccctattaacaacaacaaggcatcttttgattctttggcttccgtcgactcgctcaattccgt |
38212592 |
T |
 |
| Q |
301 |
tcatgtttctccttttgaagaatattcatctc |
332 |
Q |
| |
|
||| |||| ||||||||||||||||||||||| |
|
|
| T |
38212591 |
tcaagtttttccttttgaagaatattcatctc |
38212560 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 2 - 279
Target Start/End: Original strand, 38443263 - 38443540
Alignment:
| Q |
2 |
ggagacaataaaatcatcaccgtcgatcgtaatatcaacttctccgacctcatggcaaagctttccacgttcatgttttccgatgtttgcttcaagtatc |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||| |||||||||||||||||| |
|
|
| T |
38443263 |
ggagacaataaaatcatcaccgtcgatcgtaatatcaacttctccgacctcatggcaaagctttcctcattcatggtttccaatgtttgcttcaagtatc |
38443362 |
T |
 |
| Q |
102 |
aactccttggtgaagattttgatgctttgatcccggtttataacgaagaagatctcaatcatatgatgttcgagtatgatcgtatgtgtcacttttcacg |
201 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38443363 |
aactccttggtgaagattttgatgctttgatcccagtttataacgaagaagatctcaatcatatgatgttcgagtatgatcgtatgtgtcacttttcacg |
38443462 |
T |
 |
| Q |
202 |
aaagcctgcatggctgagggtcttcctcttccctgtccctgttaacaacaacaaggcatcttttgattctttggcttc |
279 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38443463 |
aaagcctgcatggttgagggtcttcctcttccctgtccctgttaacaacaacaaggcatcttttgattctttggcttc |
38443540 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 153 - 332
Target Start/End: Original strand, 38219947 - 38220126
Alignment:
| Q |
153 |
atctcaatcatatgatgttcgagtatgatcgtatgtgtcacttttcacgaaagcctgcatggctgagggtcttcctcttccctgtccctgttaacaacaa |
252 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||| |
|
|
| T |
38219947 |
atctcaatcatatgatgttcgagtatgatcgtatgtgtcgcttttcacgaaagcctgcatggttgagggtcttcctcttcccggtccctattaacaacaa |
38220046 |
T |
 |
| Q |
253 |
caaggcatcttttgattctttggcttccgtcgaatcgctcaattccgttcatgtttctccttttgaagaatattcatctc |
332 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||||||||||||||||||| || ||||||||||||||||||||||||| |
|
|
| T |
38220047 |
caaggcatcttttgattctttggcttccatcaaatcgctcaattccgttcaagtctctccttttgaagaatattcatctc |
38220126 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 98 - 280
Target Start/End: Original strand, 38155845 - 38156027
Alignment:
| Q |
98 |
tatcaactccttggtgaagattttgatgctttgatcccggtttataacgaagaagatctcaatcatatgatgttcgagtatgatcgtatgtgtcactttt |
197 |
Q |
| |
|
||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||| ||||||||||||||||| | |||||| | ||| ||||| |
|
|
| T |
38155845 |
tatcaactccttggtgaagatctcgatgctttgattccggtttataacgaagaagatcttgatcatatgatgttcgagaacgatcgtttatgttgctttt |
38155944 |
T |
 |
| Q |
198 |
cacgaaagcctgcatggctgagggtcttcctcttccctgtccctgttaacaacaacaaggcatcttttgattctttggcttcc |
280 |
Q |
| |
|
|||||||||||||| | |||||||||||||||||||| ||||| ||| ||||||||||||||||||| |||||||||||||| |
|
|
| T |
38155945 |
cacgaaagcctgcaaagttgagggtcttcctcttccctctccctattagcaacaacaaggcatcttttaattctttggcttcc |
38156027 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 38183358 - 38183476
Alignment:
| Q |
2 |
ggagacaataaaatcatcaccgtcgatcgtaatatcaacttctccgacctcatggcaaagctttccacgttcatgttttccgatgtttgcttcaagtatc |
101 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38183358 |
ggagacaataaaatcatcatcgtcgatcgtaatatcaacttctttgacctcatggcaaagctttccacgttcatgttttccgatgtttgcttcaagtatc |
38183457 |
T |
 |
| Q |
102 |
aactccttggtgaagattt |
120 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
38183458 |
aactccttggtgaagattt |
38183476 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 38214999 - 38214881
Alignment:
| Q |
2 |
ggagacaataaaatcatcaccgtcgatcgtaatatcaacttctccgacctcatggcaaagctttccacgttcatgttttccgatgtttgcttcaagtatc |
101 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38214999 |
ggagacaataaaatcatcatcgtcgatcgtaatatcaacttctttgacctcatggcaaagctttccacgttcatgttttccgatgtttgcttcaagtatc |
38214900 |
T |
 |
| Q |
102 |
aactccttggtgaagattt |
120 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
38214899 |
aactccttggtgaagattt |
38214881 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 26 - 191
Target Start/End: Original strand, 28340977 - 28341142
Alignment:
| Q |
26 |
gatcgtaatatcaacttctccgacctcatggcaaagctttccacgttcatgttttccgatgtttgcttcaagtatcaactccttggtgaagattttgatg |
125 |
Q |
| |
|
|||||||||||||| |||||||||||| | | ||||||||| | ||||||| | |||| |||||||||||| || |||| |||||||||| || ||| |
|
|
| T |
28340977 |
gatcgtaatatcaaattctccgacctcgttgaaaagctttcttcaaccatgtttgctgatgcttgcttcaagtaccagctccctggtgaagatcttaatg |
28341076 |
T |
 |
| Q |
126 |
ctttgatcccggtttataacgaagaagatctcaatcatatgatgttcgagtatgatcgtatgtgtc |
191 |
Q |
| |
|
||||||| | ||| | ||||| || |||||| | |||||||| ||||||||||||||||||||| |
|
|
| T |
28341077 |
atttgatctccgttcacaacgatgatgatctcgaaaatatgatggtcgagtatgatcgtatgtgtc |
28341142 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 38197426 - 38197370
Alignment:
| Q |
2 |
ggagacaataaaatcatcaccgtcgatcgtaatatcaacttctccgacctcatggca |
58 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
38197426 |
ggagacaataaaatcatcaccgtcgatcgtaatatcaacttctctgacctcatggca |
38197370 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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