View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2836_low_17 (Length: 258)

Name: NF2836_low_17
Description: NF2836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2836_low_17
NF2836_low_17
[»] chr3 (59 HSPs)
chr3 (17-258)||(22405436-22405677)
chr3 (17-147)||(10040530-10040659)
chr3 (17-155)||(25294933-25295071)
chr3 (26-165)||(54237430-54237569)
chr3 (60-150)||(19146977-19147067)
chr3 (17-155)||(51060277-51060415)
chr3 (17-150)||(29762156-29762289)
chr3 (17-165)||(6462385-6462533)
chr3 (17-160)||(53649700-53649843)
chr3 (43-150)||(34662320-34662427)
chr3 (61-150)||(7650244-7650333)
chr3 (17-150)||(54261199-54261332)
chr3 (20-164)||(29127895-29128039)
chr3 (66-165)||(3507519-3507618)
chr3 (26-129)||(3755552-3755655)
chr3 (25-164)||(29135894-29136033)
chr3 (51-164)||(28572198-28572311)
chr3 (61-150)||(31072895-31072984)
chr3 (17-126)||(49543492-49543601)
chr3 (17-121)||(3763024-3763127)
chr3 (17-117)||(15795528-15795627)
chr3 (66-165)||(3136680-3136779)
chr3 (61-155)||(13893943-13894037)
chr3 (17-164)||(15320159-15320306)
chr3 (68-155)||(47219168-47219255)
chr3 (25-128)||(47303512-47303615)
chr3 (20-150)||(7328820-7328949)
chr3 (17-150)||(48341993-48342126)
chr3 (17-119)||(52364832-52364934)
chr3 (66-127)||(30045843-30045904)
chr3 (51-115)||(4638161-4638225)
chr3 (81-165)||(49021189-49021273)
chr3 (56-155)||(928612-928711)
chr3 (60-127)||(7648756-7648823)
chr3 (43-130)||(30767268-30767355)
chr3 (99-165)||(36043660-36043726)
chr3 (66-155)||(26361963-26362052)
chr3 (66-127)||(35923647-35923708)
chr3 (25-130)||(49198332-49198437)
chr3 (93-165)||(7310689-7310761)
chr3 (66-130)||(8164575-8164639)
chr3 (17-117)||(42412808-42412908)
chr3 (67-165)||(15084931-15085029)
chr3 (43-150)||(22909783-22909889)
chr3 (93-155)||(19873421-19873483)
chr3 (68-130)||(43330753-43330815)
chr3 (68-146)||(50405608-50405686)
chr3 (64-117)||(39849091-39849144)
chr3 (25-150)||(45877435-45877560)
chr3 (17-150)||(51682955-51683088)
chr3 (67-155)||(26043835-26043923)
chr3 (51-150)||(26590267-26590366)
chr3 (17-121)||(33251635-33251739)
chr3 (68-164)||(34374429-34374525)
chr3 (17-113)||(41219566-41219661)
chr3 (17-129)||(41630534-41630646)
chr3 (66-150)||(45450448-45450532)
chr3 (66-150)||(47471853-47471937)
chr3 (66-146)||(55069684-55069764)
[»] chr4 (50 HSPs)
chr4 (27-150)||(40780861-40780984)
chr4 (17-150)||(38166005-38166138)
chr4 (17-150)||(42722577-42722710)
chr4 (17-148)||(1940779-1940907)
chr4 (17-150)||(29895765-29895898)
chr4 (62-150)||(2559330-2559418)
chr4 (61-165)||(4738640-4738744)
chr4 (17-121)||(1446804-1446908)
chr4 (66-150)||(7246646-7246730)
chr4 (17-145)||(8889000-8889128)
chr4 (17-164)||(53599038-53599185)
chr4 (56-130)||(5472868-5472942)
chr4 (56-150)||(43458630-43458724)
chr4 (17-130)||(7741903-7742016)
chr4 (17-150)||(47078436-47078569)
chr4 (66-155)||(49260660-49260749)
chr4 (17-150)||(52950060-52950193)
chr4 (17-149)||(21429279-21429411)
chr4 (25-165)||(36145200-36145340)
chr4 (51-130)||(6779223-6779302)
chr4 (51-150)||(16450312-16450411)
chr4 (20-155)||(20128290-20128425)
chr4 (43-130)||(20532429-20532516)
chr4 (64-155)||(38168282-38168372)
chr4 (60-150)||(14859312-14859402)
chr4 (61-155)||(18531541-18531635)
chr4 (20-150)||(38075414-38075544)
chr4 (56-150)||(47682382-47682475)
chr4 (60-146)||(48317279-48317365)
chr4 (64-149)||(295534-295619)
chr4 (17-150)||(55921012-55921145)
chr4 (43-155)||(13073542-13073654)
chr4 (51-150)||(14124028-14124127)
chr4 (51-150)||(43468359-43468458)
chr4 (17-150)||(49952145-49952279)
chr4 (68-126)||(55703776-55703834)
chr4 (61-146)||(3159473-3159558)
chr4 (17-129)||(27248406-27248516)
chr4 (67-155)||(33647749-33647837)
chr4 (66-130)||(3507297-3507361)
chr4 (56-116)||(14077963-14078023)
chr4 (66-130)||(36262787-36262851)
chr4 (66-117)||(17080070-17080121)
chr4 (51-130)||(30317245-30317324)
chr4 (66-121)||(42722408-42722463)
chr4 (43-117)||(3574479-3574553)
chr4 (17-127)||(41162905-41163015)
chr4 (17-115)||(33109300-33109400)
chr4 (66-115)||(48015108-48015157)
chr4 (17-73)||(13552092-13552148)
[»] chr8 (30 HSPs)
chr8 (17-165)||(2467103-2467251)
chr8 (25-129)||(22958755-22958859)
chr8 (17-166)||(15884540-15884688)
chr8 (17-130)||(36914453-36914566)
chr8 (41-150)||(43032902-43033011)
chr8 (66-150)||(4479296-4479380)
chr8 (62-165)||(10927628-10927731)
chr8 (17-155)||(6100449-6100587)
chr8 (51-130)||(18374021-18374100)
chr8 (51-150)||(43027316-43027415)
chr8 (59-165)||(13357941-13358047)
chr8 (17-163)||(14846553-14846698)
chr8 (17-150)||(3418513-3418646)
chr8 (42-111)||(13359024-13359093)
chr8 (17-165)||(24837219-24837367)
chr8 (64-155)||(2964100-2964191)
chr8 (67-150)||(23895595-23895678)
chr8 (17-123)||(13085501-13085607)
chr8 (17-150)||(17981418-17981551)
chr8 (55-111)||(8586978-8587034)
chr8 (66-150)||(45521194-45521278)
chr8 (41-168)||(26570925-26571052)
chr8 (82-164)||(8803096-8803178)
chr8 (17-146)||(68102-68231)
chr8 (66-155)||(583838-583927)
chr8 (25-130)||(8141087-8141192)
chr8 (25-150)||(14666071-14666196)
chr8 (66-150)||(8997544-8997628)
chr8 (19-155)||(16893916-16894050)
chr8 (67-115)||(21174167-21174215)
[»] chr6 (34 HSPs)
chr6 (17-165)||(21898625-21898773)
chr6 (17-165)||(6606082-6606230)
chr6 (61-164)||(12606451-12606554)
chr6 (56-150)||(3601100-3601194)
chr6 (17-150)||(13036004-13036137)
chr6 (67-155)||(9633620-9633708)
chr6 (17-164)||(30788839-30788984)
chr6 (17-127)||(2271326-2271434)
chr6 (17-155)||(13468910-13469048)
chr6 (17-150)||(5253223-5253356)
chr6 (56-164)||(19089514-19089622)
chr6 (17-155)||(14107353-14107491)
chr6 (66-155)||(29444760-29444849)
chr6 (41-165)||(5029818-5029942)
chr6 (66-130)||(19230579-19230643)
chr6 (48-164)||(30410453-30410569)
chr6 (51-127)||(34954642-34954718)
chr6 (20-155)||(8932641-8932776)
chr6 (20-155)||(8944107-8944242)
chr6 (17-155)||(8611969-8612107)
chr6 (66-116)||(10396499-10396549)
chr6 (104-165)||(8149782-8149843)
chr6 (18-155)||(12635792-12635929)
chr6 (17-105)||(10311514-10311602)
chr6 (66-130)||(32157187-32157251)
chr6 (68-127)||(8888910-8888969)
chr6 (51-150)||(8938722-8938821)
chr6 (56-127)||(33940027-33940098)
chr6 (93-155)||(14783415-14783477)
chr6 (56-150)||(31129193-31129287)
chr6 (66-119)||(3587976-3588029)
chr6 (66-114)||(9366459-9366507)
chr6 (41-165)||(11142604-11142728)
chr6 (66-122)||(13391312-13391368)
[»] chr2 (57 HSPs)
chr2 (17-130)||(42770671-42770784)
chr2 (17-165)||(10823033-10823181)
chr2 (17-150)||(2550841-2550974)
chr2 (66-150)||(25540404-25540488)
chr2 (17-165)||(41220608-41220756)
chr2 (25-150)||(14169609-14169734)
chr2 (17-165)||(7747247-7747395)
chr2 (26-130)||(38962745-38962849)
chr2 (17-155)||(8410104-8410242)
chr2 (17-130)||(10026636-10026749)
chr2 (17-150)||(18902530-18902663)
chr2 (17-155)||(20612529-20612669)
chr2 (51-127)||(34722687-34722763)
chr2 (64-163)||(44945613-44945712)
chr2 (43-150)||(27725939-27726046)
chr2 (19-150)||(28616379-28616510)
chr2 (64-150)||(3643887-3643973)
chr2 (67-165)||(10669615-10669713)
chr2 (17-155)||(22593108-22593244)
chr2 (51-165)||(24179576-24179689)
chr2 (17-127)||(37560146-37560256)
chr2 (17-146)||(21286417-21286546)
chr2 (66-150)||(16813165-16813249)
chr2 (66-150)||(16852444-16852528)
chr2 (17-145)||(39201513-39201641)
chr2 (27-150)||(35946722-35946844)
chr2 (51-150)||(44139491-44139590)
chr2 (19-165)||(3811676-3811822)
chr2 (68-165)||(12455334-12455431)
chr2 (61-150)||(12864241-12864330)
chr2 (19-116)||(13026445-13026542)
chr2 (62-155)||(20116607-20116700)
chr2 (17-165)||(38005375-38005523)
chr2 (25-141)||(331482-331598)
chr2 (17-165)||(2528326-2528474)
chr2 (66-150)||(11069900-11069984)
chr2 (66-130)||(45263687-45263751)
chr2 (51-150)||(16325602-16325701)
chr2 (51-150)||(41031906-41032005)
chr2 (68-150)||(9360748-9360830)
chr2 (68-155)||(29653651-29653733)
chr2 (17-150)||(2784906-2785038)
chr2 (61-130)||(6358171-6358240)
chr2 (61-130)||(7787073-7787142)
chr2 (61-118)||(34356223-34356280)
chr2 (17-117)||(41187822-41187922)
chr2 (110-150)||(44023361-44023401)
chr2 (19-150)||(16034912-16035043)
chr2 (56-150)||(18649026-18649120)
chr2 (25-127)||(19976830-19976932)
chr2 (93-127)||(25549777-25549811)
chr2 (68-126)||(28525479-28525537)
chr2 (66-127)||(29422237-29422298)
chr2 (17-150)||(31596432-31596565)
chr2 (51-127)||(3848937-3849013)
chr2 (30-126)||(10106574-10106670)
chr2 (43-123)||(43303319-43303399)
[»] chr7 (41 HSPs)
chr7 (17-127)||(1797436-1797546)
chr7 (25-150)||(38578867-38578992)
chr7 (16-155)||(17748377-17748516)
chr7 (17-150)||(48804659-48804792)
chr7 (17-165)||(22993352-22993500)
chr7 (17-150)||(4195202-4195335)
chr7 (17-165)||(10047861-10048009)
chr7 (17-165)||(13095834-13095982)
chr7 (66-126)||(39474965-39475025)
chr7 (66-150)||(41945498-41945582)
chr7 (43-130)||(23658181-23658268)
chr7 (51-150)||(34659236-34659335)
chr7 (17-155)||(22973943-22974081)
chr7 (43-130)||(5039438-5039525)
chr7 (26-144)||(28396166-28396284)
chr7 (66-164)||(28744187-28744285)
chr7 (17-150)||(43346779-43346912)
chr7 (25-150)||(47341860-47341985)
chr7 (27-155)||(5069810-5069938)
chr7 (66-150)||(8734686-8734770)
chr7 (17-117)||(16802099-16802199)
chr7 (66-118)||(37514946-37514998)
chr7 (66-166)||(39420862-39420962)
chr7 (61-155)||(1605961-1606055)
chr7 (17-115)||(43925488-43925586)
chr7 (17-150)||(21190780-21190913)
chr7 (56-165)||(21530763-21530872)
chr7 (51-155)||(43861967-43862071)
chr7 (43-127)||(3353427-3353510)
chr7 (17-149)||(18785645-18785777)
chr7 (51-150)||(26423288-26423386)
chr7 (17-115)||(365116-365214)
chr7 (17-155)||(14650293-14650431)
chr7 (67-164)||(48551883-48551980)
chr7 (61-150)||(27028299-27028388)
chr7 (78-150)||(3603394-3603466)
chr7 (17-73)||(9685715-9685771)
chr7 (82-165)||(24983403-24983487)
chr7 (66-150)||(29805440-29805524)
chr7 (67-119)||(30827318-30827370)
chr7 (26-130)||(36619274-36619378)
[»] chr5 (53 HSPs)
chr5 (17-155)||(42086301-42086439)
chr5 (17-165)||(5731905-5732053)
chr5 (51-155)||(9805012-9805116)
chr5 (26-150)||(14588617-14588741)
chr5 (17-155)||(1538405-1538543)
chr5 (17-155)||(19572698-19572836)
chr5 (17-150)||(7866555-7866688)
chr5 (61-150)||(20682617-20682706)
chr5 (43-150)||(37263241-37263347)
chr5 (43-127)||(41800977-41801061)
chr5 (51-130)||(12081916-12081995)
chr5 (64-126)||(9168277-9168339)
chr5 (17-150)||(20525812-20525945)
chr5 (17-150)||(8513493-8513626)
chr5 (43-127)||(23247374-23247458)
chr5 (66-165)||(38897704-38897803)
chr5 (67-150)||(42291505-42291588)
chr5 (51-150)||(23383665-23383764)
chr5 (17-116)||(25417217-25417316)
chr5 (17-155)||(9812846-9812984)
chr5 (17-155)||(12766105-12766243)
chr5 (51-117)||(18262651-18262717)
chr5 (43-121)||(35638062-35638140)
chr5 (60-150)||(43399145-43399235)
chr5 (25-166)||(4016239-4016380)
chr5 (30-150)||(40117402-40117522)
chr5 (25-117)||(7308397-7308489)
chr5 (27-150)||(7336604-7336726)
chr5 (66-130)||(18294504-18294568)
chr5 (71-155)||(24499010-24499094)
chr5 (61-165)||(39099764-39099868)
chr5 (67-130)||(3653934-3653997)
chr5 (60-155)||(13664277-13664372)
chr5 (59-150)||(20255385-20255476)
chr5 (67-126)||(24463910-24463969)
chr5 (51-130)||(30995129-30995208)
chr5 (17-104)||(35403558-35403645)
chr5 (43-97)||(7736871-7736925)
chr5 (17-155)||(12704988-12705126)
chr5 (66-164)||(30349602-30349700)
chr5 (17-155)||(41163455-41163592)
chr5 (61-130)||(5079349-5079418)
chr5 (17-150)||(11845801-11845934)
chr5 (69-150)||(14728109-14728190)
chr5 (43-126)||(21487617-21487697)
chr5 (68-165)||(42861203-42861300)
chr5 (26-130)||(24653832-24653935)
chr5 (67-127)||(24875369-24875429)
chr5 (43-130)||(14974344-14974431)
chr5 (66-116)||(35006769-35006819)
chr5 (101-155)||(40773331-40773385)
chr5 (103-164)||(36783303-36783364)
chr5 (103-150)||(27648425-27648472)
[»] chr1 (47 HSPs)
chr1 (17-155)||(8763965-8764103)
chr1 (17-150)||(26325786-26325919)
chr1 (17-165)||(41663842-41663990)
chr1 (18-155)||(43959817-43959954)
chr1 (17-150)||(5855496-5855629)
chr1 (51-155)||(17642000-17642104)
chr1 (69-165)||(37339846-37339942)
chr1 (17-150)||(10422762-10422895)
chr1 (42-127)||(33498863-33498948)
chr1 (17-150)||(45361883-45362016)
chr1 (29-129)||(17092499-17092599)
chr1 (25-165)||(18915849-18915989)
chr1 (69-129)||(33418137-33418197)
chr1 (25-127)||(14254292-14254394)
chr1 (42-150)||(50371835-50371943)
chr1 (17-165)||(49078088-49078236)
chr1 (75-150)||(4581683-4581758)
chr1 (17-119)||(32845-32947)
chr1 (17-127)||(10336490-10336600)
chr1 (17-150)||(18649353-18649486)
chr1 (51-155)||(44969673-44969776)
chr1 (17-150)||(50503362-50503495)
chr1 (69-129)||(5063866-5063926)
chr1 (82-150)||(9659180-9659248)
chr1 (61-121)||(10507716-10507776)
chr1 (67-150)||(10172972-10173055)
chr1 (17-116)||(33004050-33004149)
chr1 (51-130)||(45726454-45726533)
chr1 (68-150)||(2567301-2567383)
chr1 (61-150)||(16263563-16263652)
chr1 (17-150)||(2980932-2981065)
chr1 (17-150)||(16956440-16956573)
chr1 (17-118)||(25178609-25178709)
chr1 (17-146)||(30927732-30927861)
chr1 (64-129)||(48761197-48761262)
chr1 (42-146)||(31576552-31576656)
chr1 (51-150)||(5504039-5504138)
chr1 (68-123)||(17988688-17988743)
chr1 (66-117)||(21849239-21849290)
chr1 (17-116)||(48798105-48798204)
chr1 (67-121)||(13262107-13262161)
chr1 (66-115)||(6563464-6563513)
chr1 (43-116)||(28324615-28324688)
chr1 (76-121)||(35908791-35908836)
chr1 (66-150)||(11397890-11397974)
chr1 (66-150)||(26660161-26660244)
chr1 (51-155)||(34697343-34697447)
[»] scaffold0029 (1 HSPs)
scaffold0029 (43-155)||(41046-41158)
[»] scaffold0011 (2 HSPs)
scaffold0011 (43-150)||(224319-224426)
scaffold0011 (76-150)||(186552-186626)
[»] scaffold0002 (3 HSPs)
scaffold0002 (17-164)||(319398-319545)
scaffold0002 (17-85)||(412091-412159)
scaffold0002 (17-150)||(546-679)
[»] scaffold0006 (1 HSPs)
scaffold0006 (17-148)||(68493-68621)
[»] scaffold0005 (1 HSPs)
scaffold0005 (17-117)||(271107-271207)
[»] scaffold0223 (1 HSPs)
scaffold0223 (51-150)||(16889-16988)
[»] scaffold0170 (1 HSPs)
scaffold0170 (61-130)||(9865-9934)
[»] scaffold0010 (1 HSPs)
scaffold0010 (56-155)||(155706-155805)
[»] scaffold0291 (1 HSPs)
scaffold0291 (51-150)||(6865-6964)
[»] scaffold0016 (1 HSPs)
scaffold0016 (51-150)||(8701-8800)
[»] scaffold0009 (1 HSPs)
scaffold0009 (67-150)||(42832-42915)
[»] scaffold0376 (1 HSPs)
scaffold0376 (17-150)||(12646-12779)
[»] scaffold0086 (1 HSPs)
scaffold0086 (61-121)||(26203-26263)
[»] scaffold0001 (1 HSPs)
scaffold0001 (66-117)||(65185-65236)
[»] scaffold0341 (1 HSPs)
scaffold0341 (66-115)||(18657-18706)
[»] scaffold0209 (1 HSPs)
scaffold0209 (66-155)||(12598-12687)
[»] scaffold0155 (1 HSPs)
scaffold0155 (66-150)||(19280-19364)
[»] scaffold0635 (1 HSPs)
scaffold0635 (30-126)||(2114-2210)


Alignment Details
Target: chr3 (Bit Score: 158; Significance: 4e-84; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 17 - 258
Target Start/End: Complemental strand, 22405677 - 22405436
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    |||||||||||| ||||||| ||||||||| ||  ||||||||||||||||||||||||||   || |||| ||  || |||||||||||||||||| ||    
T  22405677 agctcctaccaatgacgtatccgtgaaataccggattctattctcaggaggaacaacgcttaaccaatgcgaatgcctttatgcacgagccggattaatc 22405578  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaacgaaggaattcatgctagcttttaatgtcttcatgttttgatcatccaaca 216  Q
    |||||||||||||| |  ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22405577 gtccatctttggtgcgtcggaaaccagtgcaaaacccaagaataaaaaacgaaggaattcatgctagcttttaatgtcttcatgttttcatcatccaaca 22405478  T
Q  217 aatagtaactgtttgattatccttttactttgtacctttgct 258  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  22405477 aatagtaactgtttgattatccttttactttgtatctttgct 22405436  T

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Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 147
Target Start/End: Original strand, 10040530 - 10040659
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| | |||||||||  || | ||||||| |||| ||||||||| |||||||||||||| ||||||||||  ||||| |||||||||||| | |||    
T  10040530 agctccttctaaggacgtacccggggaatatcgggttcgattctcagg-ggaacaacgcttggccagtgcgcatgcctctacgcacgagccggaatggtc 10040628  T
Q  117 gtccatctttggtgtgatggaaaccggtgcg 147  Q
    ||||| |||||||| | ||||||||||||||    
T  10040629 gtccacctttggtgggttggaaaccggtgcg 10040659  T

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Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 25294933 - 25295071
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| || | |||| || |||  |||||| || | |||||| ||||| ||||||||||  ||||||||| ||||||||||||||    
T  25294933 agctccttccaaggacgtatccggggaataccgggtttgattctctggggaaacaacacttggccagtgcgcatgcctctatgcatgagccggattagtc 25295032  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    ||||| | |||||| | ||||||||||||||||| ||||    
T  25295033 gtccaccattggtgggttggaaaccggtgcgaaagccaa 25295071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 165
Target Start/End: Original strand, 54237430 - 54237569
Alignment:
Q  26 caaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctt 125  Q
    ||||||||||| || ||||||||| | || ||| |||||  ||||||| |||||||||||||||| |||||| ||| ||||||||| ||||||||| | |    
T  54237430 caaggacgtatccgggaaatatcggggtcgattttcagggagaacaacacttggtcagtgcgcatgtctctacgcatgagccggataagtcgtccaccat 54237529  T
Q  126 tggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    | ||| |  |||||||||||||||| |||| || ||||||    
T  54237530 tagtgggtcggaaaccggtgcgaaagccaaaaagaaaaaa 54237569  T

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Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 19146977 - 19147067
Alignment:
Q  60 tcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||||||||||||||||||| ||||| | ||  |||||||||||||| |||||||||||||| |||||||| |  ||||||||||||||||    
T  19146977 tcaggaggaacaacgcttggccagtgtgtatccctctatgcacgagctggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 19147067  T

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Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 155
Target Start/End: Complemental strand, 51060415 - 51060277
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||  ||| || | ||||||| |||| ||||||||| |||||||| ||||||||||||||||  ||||| ||| || | |||||||||    
T  51060415 agctccttccaaggatctatccggggaatatcgggttcgattctcagggggaacaacacttggtcagtgcgcatgcctctacgcatgaactggattagtc 51060316  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    ||||| | |||||| |  |||||||||||||||| ||||    
T  51060315 gtccaccattggtgggtcggaaaccggtgcgaaagccaa 51060277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 29762289 - 29762156
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| ||||||| |||| || | ||||||| || | ||||||||| | |||||| ||||| ||||||||||  ||||||||| |||| |||||||||    
T  29762289 agctccttccaaggatgtattcggggaatatcgggtccgattctcaggggcaacaacacttggccagtgcgcatgcctctatgcatgagctggattagtc 29762190  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||| | |||||| |  ||||||||||||||||    
T  29762189 gtccaccattggtgggtcggaaaccggtgcgaaa 29762156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 6462385 - 6462533
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| ||||||||||||  | | |||| || |||| |||| ||||  ||||||||||||| ||||||||||  ||||| ||| ||||||||||||||    
T  6462385 agctccttccaaggacgtatctggggaataccgggttcgattcacagggagaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtc 6462484  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    | ||||  || ||| | ||||||||||||||||| |||| || ||||||    
T  6462485 gaccattattagtgggttggaaaccggtgcgaaaaccaaaaaaaaaaaa 6462533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 160
Target Start/End: Original strand, 53649700 - 53649843
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| || | |||| || |||| |||||||||  ||||||| ||||| |||||||| | |||||| ||| ||||||||||||||    
T  53649700 agctccttccaaggacgtattcggggaataccgggttcgattctcagggtgaacaacacttggccagtgcgcctgtctctacgcatgagccggattagtc 53649799  T
Q  117 gtccatctttggtgtgat-ggaaaccggtgcgaaacccaagaata 160  Q
    || || ||||| || ||| |||||||||||||||| |||| ||||    
T  53649800 gttcacctttgatg-gatcggaaaccggtgcgaaaaccaaaaata 53649843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 34662427 - 34662320
Alignment:
Q  43 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccg 142  Q
    ||||||| |||| ||| |||||||||| |||| ||||||||| ||||| |||||||||| |||||| |||||||||||| |||| |||   |||||||||    
T  34662427 aatatcgggttcgattttcaggaggaataacgtttggtcagtacgcatgtctctatgcatgagccgaattagtcgtccacctttagtggattggaaaccg 34662328  T
Q  143 gtgcgaaa 150  Q
     |||||||    
T  34662327 atgcgaaa 34662320  T

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Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 7650244 - 7650333
Alignment:
Q  61 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||| |||||||| ||||| |||| || || |||||| ||||||||||||||||||| ||| |||||||| | |||||||||||||||||    
T  7650244 cagggggaacaacacttggccagtacgaatgtctctacgcacgagccggattagtcgcccacctttggtgggttggaaaccggtgcgaaa 7650333  T

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Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 54261199 - 54261332
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||   | | |||| || |||| ||||  |||||||||||||||||| ||||||||||  ||||| ||| ||||||||||||||    
T  54261199 agctccttccaaggacgtacctggggaataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtc 54261298  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    || || |||| ||| |  ||||||||||||||||    
T  54261299 gttcacctttagtgggtcggaaaccggtgcgaaa 54261332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 29127895 - 29128039
Alignment:
Q  20 tcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtc 119  Q
    |||| ||||||||||||  | | ||||||| |||| |||  ||||  ||||||| ||||||||||||||||  ||||| ||| ||||||||||||||| |    
T  29127895 tccttccaaggacgtatctggggaatatcgggttcgatttccagggagaacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtcgcc 29127994  T
Q  120 catctttggtgtgatggaaaccggtgcgaaacccaagaataaaaa 164  Q
    || |||||||| |  |||||||| ||||||| |||| || |||||    
T  29127995 cacctttggtgggtcggaaaccgatgcgaaagccaaaaaaaaaaa 29128039  T

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Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 3507618 - 3507519
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    |||||||| ||||| ||||||||||  ||||| |||||||||||||||||||  || |||||||| |  |||||||||||||||| |||| || ||||||    
T  3507618 ggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaaaccaacaaaaaaaaa 3507519  T

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Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 3755552 - 3755655
Alignment:
Q  26 caaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctt 125  Q
    ||||||||||| || | |||| ||| ||| |||| |||||||||||||| |||  |||||||||| |||||| ||| ||||||||||||||||| | |||    
T  3755552 caaggacgtatccggggaataccgacttcgattcccaggaggaacaacgtttgaccagtgcgcatgtctctacgcatgagccggattagtcgtctacctt 3755651  T
Q  126 tggt 129  Q
    ||||    
T  3755652 tggt 3755655  T

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Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 164
Target Start/End: Original strand, 29135894 - 29136033
Alignment:
Q  25 ccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatct 124  Q
    |||||||||||| || | |||| ||  ||| |||| |||| |||||||| ||||| ||||||||||  ||||| ||| |||||||||||||| |||| |     
T  29135894 ccaaggacgtatccggggaataccggattcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcttccacca 29135993  T
Q  125 ttggtgtgatggaaaccggtgcgaaacccaagaataaaaa 164  Q
    |||||| | ||||||||||| ||||| |||| || |||||    
T  29135994 ttggtgggttggaaaccggtacgaaagccaaaaaaaaaaa 29136033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 164
Target Start/End: Complemental strand, 28572311 - 28572198
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||| |||| |||| | |||||||||||| ||||  ||||  ||||| ||||||||||||||||||| ||| |||||||| |  ||||||||||||||||    
T  28572311 gttcgattcccaggggaaacaacgcttggccagtatgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 28572212  T
Q  151 cccaagaataaaaa 164  Q
     |||| || |||||    
T  28572211 gccaaaaaaaaaaa 28572198  T

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Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 31072895 - 31072984
Alignment:
Q  61 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||| ||||||||||||||||||||| |||  ||||| |||||| || ||||| ||||||| |||||||  | |||||||||||||||||    
T  31072895 cagggggaacaacgcttggtcagtgcacatgcctctacgcacgacccagattaatcgtccacctttggtaggttggaaaccggtgcgaaa 31072984  T

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Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 49543492 - 49543601
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| |  | ||||||| |||| ||||||| | ||||||||| |||||||||| ||||  ||||| |||||||||| |||||||    
T  49543492 agctccttccaaggacgtatcccgggaatatcgggttcgattctcatggggaacaacgtttggtcagtgtgcatgcctctacgcacgagccgaattagtc 49543591  T
Q  117 gtccatcttt 126  Q
    | ||| ||||    
T  49543592 gcccaccttt 49543601  T

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Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 3763024 - 3763127
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    |||||||  ||||||||||| || |||||| ||  ||| |||| ||| ||||||||||||||||||||| |||| |||||| |||||| | |||||||||    
T  3763024 agctcctttcaaggacgtatccgggaaataccggattcgattcacag-aggaacaacgcttggtcagtgtgcatgtctctacgcacgaactggattagtc 3763122  T
Q  117 gtcca 121  Q
    |||||    
T  3763123 gtcca 3763127  T

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Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 15795627 - 15795528
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | |||| ||||||| |||| |||| |||||||||||||||||||||||||  ||||| |||||||| | |||||||    
T  15795627 agctccttccaaggacgtacccggggaataccgagttcgattcccagg-ggaacaacgcttggtcagtgcgcatgcctctacgcacgagctgaattagtc 15795529  T

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Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 3136779 - 3136680
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    |||||||| ||||| ||||||||||  ||||| ||| ||| ||||||||||||||| |||||||  |  |||||||||||||||| |||| || ||||||    
T  3136779 ggaacaacacttgggcagtgcgcatgcctctacgcatgagtcggattagtcgtccacctttggttggtcggaaaccggtgcgaaagccaaaaaaaaaaaa 3136680  T

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Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 13893943 - 13894037
Alignment:
Q  61 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaacccaa 155  Q
    |||| ||||||||||||||||| |||||||  |||||  |||||||||||||||||| ||| |||||||| ||| | |||||||||||||| ||||    
T  13893943 cagggggaacaacgcttggtcaatgcgcatgcctctacacacgagccggattagtcgcccacctttggtg-gatcgaaaaccggtgcgaaagccaa 13894037  T

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Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 164
Target Start/End: Original strand, 15320159 - 15320306
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | |||| || |||| |||   ||||||||||| | |||| ||||| ||||  ||||| ||||||||||||||||||    
T  15320159 agctccttccaaggacgtacccggggaataccgggttcgatttcgaggaggaacaatgattggccagtgtgcatgcctctacgcacgagccggattagtc 15320258  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaa 164  Q
    | ||| |||||||| |   ||||||||||||||| |||| || |||||    
T  15320259 gcccacctttggtgggtcagaaaccggtgcgaaagccaaaaaaaaaaa 15320306  T

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Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 68 - 155
Target Start/End: Original strand, 47219168 - 47219255
Alignment:
Q  68 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    ||||||||||||  |||||||||  ||||| ||| ||||||||||||||||||| ||||| || |  |||||||||||||||| ||||    
T  47219168 aacaacgcttggctagtgcgcatgcctctacgcatgagccggattagtcgtccacctttgatgggtcggaaaccggtgcgaaagccaa 47219255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 128
Target Start/End: Complemental strand, 47303615 - 47303512
Alignment:
Q  25 ccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatct 124  Q
    |||||||||||| ||  |||||||| |||  |||| ||||||||||||| |||||||||||| |||  |||||  || ||||||||||||||||| | ||    
T  47303615 ccaaggacgtatccggaaaatatcgggtttgattcccaggaggaacaacacttggtcagtgcacatgcctctacacatgagccggattagtcgtcaacct 47303516  T
Q  125 ttgg 128  Q
    ||||    
T  47303515 ttgg 47303512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 150
Target Start/End: Original strand, 7328820 - 7328949
Alignment:
Q  20 tcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtc 119  Q
    |||| |||||||||||  || |||||| || |||| |||| |||| |||||||| ||||| ||||||||||  || || ||| ||||||||||||||| |    
T  7328820 tccttccaaggacgtacccgggaaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcct-tacgcatgagccggattagtcgcc 7328918  T
Q  120 catctttggtgtgatggaaaccggtgcgaaa 150  Q
    || |||||||| |  | ||||||||||||||    
T  7328919 cacctttggtgggtcgaaaaccggtgcgaaa 7328949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 48341993 - 48342126
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||   | | |||| || |||||||||  ||| ||||||||||||||  |||||||||  ||||| ||| || || ||||||||    
T  48341993 agctccttccaaggacgtacctggggaataccgggttctattcctagggggaacaacgcttggctagtgcgcatgcctctacgcatgaaccagattagtc 48342092  T
Q  117 gtccatctttggtgtgat-ggaaaccggtgcgaaa 150  Q
    |||||||||||||| ||| |||||| |||||||||    
T  48342093 gtccatctttggtg-gatcggaaacaggtgcgaaa 48342126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 52364934 - 52364832
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | |||| ||||||| |||| ||| ||||||||||||||  ||||||||||  ||||| |||||||| |||||| ||    
T  52364934 agctccttccaaggacgtacccggggaataccgagttcgattcccagaaggaacaacgcttgaccagtgcgcatgcctctacgcacgagctggattaatc 52364835  T
Q  117 gtc 119  Q
    |||    
T  52364834 gtc 52364832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 30045843 - 30045904
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttg 127  Q
    |||||||||||||| |||||||||| |||||| ||||||| | ||||||||||||| |||||    
T  30045843 ggaacaacgcttggccagtgcgcatgtctctacgcacgagtctgattagtcgtccacctttg 30045904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 4638161 - 4638225
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagt 115  Q
    |||| |||| |||||| |||||||||||  ||||||||||| ||||| |||||||||||||||||    
T  4638161 gttcgattcccaggagaaacaacgcttgaccagtgcgcatacctctacgcacgagccggattagt 4638225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 165
Target Start/End: Complemental strand, 49021273 - 49021189
Alignment:
Q  81 cagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    ||||||||||  ||||| ||| ||||||||||||||||||| | |||||| |  |||||||||||||||| |||| || ||||||    
T  49021273 cagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagccaaaaaaaaaaaa 49021189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 155
Target Start/End: Original strand, 928612 - 928711
Alignment:
Q  56 attctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    ||||||||| |||||||| ||||  ||||||||||  | ||| |||||||||||||||||| |||| |||||||| |  | ||| |||||||||| ||||    
T  928612 attctcagggggaacaacacttgaccagtgcgcatgccgctacgcacgagccggattagtcatccacctttggtgagtcgaaaatcggtgcgaaagccaa 928711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 7648756 - 7648823
Alignment:
Q  60 tcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttg 127  Q
    ||||| ||||||||| |||  ||||||||||| ||||| ||||||||||||||||||| ||| |||||    
T  7648756 tcagggggaacaacgtttgaccagtgcgcatacctctacgcacgagccggattagtcgcccacctttg 7648823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 30767355 - 30767268
Alignment:
Q  43 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 130  Q
    ||||||| |||| |||  |||| |||||||| ||||| ||||| ||||  ||||| ||||||||||||||||||| ||| ||||||||    
T  30767355 aatatcgggttcgatttccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcgcccacctttggtg 30767268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 36043726 - 36043660
Alignment:
Q  99 gcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    ||||||||||||||||||| ||| |||||||| |  |||||||||||||||| |||| || ||||||    
T  36043726 gcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagccaaaaaaaaaaaa 36043660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 155
Target Start/End: Complemental strand, 26362052 - 26361963
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    ||||||||| |||||||||| ||||  ||||| |||||||||||||||||||  || ||||| || |  ||||||||||| |||| ||||    
T  26362052 ggaacaacgtttggtcagtgtgcatgcctctacgcacgagccggattagtcgcacacctttgatgggtcggaaaccggtgtgaaagccaa 26361963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 35923708 - 35923647
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttg 127  Q
    ||||||||| |||| ||||||||||  ||||| ||||||| || ||||||||||||||||||    
T  35923708 ggaacaacgtttggccagtgcgcatgcctctaagcacgagtcgaattagtcgtccatctttg 35923647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 130
Target Start/End: Original strand, 49198332 - 49198437
Alignment:
Q  25 ccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatct 124  Q
    |||||||| ||| || | |||| || |||| ||||  ||| |||||||| ||||| ||||||||||  ||||| ||| ||||||||||||||||||| |     
T  49198332 ccaaggacatatccggggaataccgggttcgattcctagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacca 49198431  T
Q  125 ttggtg 130  Q
    ||||||    
T  49198432 ttggtg 49198437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 7310761 - 7310689
Alignment:
Q  93 ctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    ||||| |||||||||||||||||||  ||||||||||| |  |||||||| ||||||| |||| || ||||||    
T  7310761 ctctacgcacgagccggattagtcgctcatctttggtgggtcggaaaccgatgcgaaagccaaaaaaaaaaaa 7310689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 8164575 - 8164639
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 130  Q
    |||||||||||||| ||||||||||  || || ||||||| ||||||||||| ||| ||||||||    
T  8164575 ggaacaacgcttggccagtgcgcatgcctttacgcacgagtcggattagtcgcccacctttggtg 8164639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 42412908 - 42412808
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| || | |||| || |||| |||| | || ||||||||||||||  ||||| |||  ||||| ||| ||||||||||||||    
T  42412908 agctccttccaaggacgtatccggggaataccgggttcgattcccggggggaacaacgcttggcaagtgcccatgcctctacgcatgagccggattagtc 42412809  T
Q  117 g 117  Q
    |    
T  42412808 g 42412808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 15085029 - 15084931
Alignment:
Q  67 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    |||||||| |||| ||||| ||||| ||||| | ||||||  ||||||||||| |||||||||| ||| ||||||||||| |||| |||| || ||||||    
T  15085029 gaacaacggttggccagtgtgcatacctctacgtacgagctagattagtcgtctatctttggtg-gatcggaaaccggtgtgaaagccaaaaaaaaaaaa 15084931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 22909783 - 22909889
Alignment:
Q  43 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccg 142  Q
    ||||||| |||| |||||||| |||||||||||| ||  ||||||||||  |||| ||| |||||| ||||||||| || ||||| || |  |||||||     
T  22909783 aatatcgggttcgattctcag-aggaacaacgctaggctagtgcgcatacttctacgcatgagccgaattagtcgtgcacctttgatgggtcggaaacca 22909881  T
Q  143 gtgcgaaa 150  Q
    ||||||||    
T  22909882 gtgcgaaa 22909889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 19873421 - 19873483
Alignment:
Q  93 ctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    ||||| |||||||||||||||||||||||||||| ||| |  |||||| ||||| ||| ||||    
T  19873421 ctctacgcacgagccggattagtcgtccatcttttgtgggtcggaaactggtgcaaaagccaa 19873483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 130
Target Start/End: Complemental strand, 43330815 - 43330753
Alignment:
Q  68 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 130  Q
    |||||| ||||  ||||||||||  ||||| ||||||||||||||||||| ||| ||||||||    
T  43330815 aacaacacttgaccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtg 43330753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 50405686 - 50405608
Alignment:
Q  68 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgc 146  Q
    |||||||||||  ||||||||||  ||||| ||||||| ||||||||||| ||| | |||||| |  ||||||||||||    
T  50405686 aacaacgcttgaccagtgcgcatgcctctacgcacgagtcggattagtcgcccaccattggtgggtcggaaaccggtgc 50405608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 117
Target Start/End: Original strand, 39849091 - 39849144
Alignment:
Q  64 gaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcg 117  Q
    |||||||||||||||| ||||| ||||  ||||| ||| |||||||||||||||    
T  39849091 gaggaacaacgcttggccagtgtgcatgcctctacgcatgagccggattagtcg 39849144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 150
Target Start/End: Original strand, 45877435 - 45877560
Alignment:
Q  25 ccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatct 124  Q
    |||||||||||| || | |||| || |||| |||  |||| | |||||| ||||| |||||| |||  ||||| ||| |||||||||||||||| || |     
T  45877435 ccaaggacgtatccggggaataccgggttcgatttccaggggaaacaacacttggccagtgcacatgcctctacgcatgagccggattagtcgttcacca 45877534  T
Q  125 ttggtgtgatggaaaccggtgcgaaa 150  Q
    ||| || |  ||||||||||||||||    
T  45877535 ttgatgggtcggaaaccggtgcgaaa 45877560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 51683088 - 51682955
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||| ||||||| || | |||| |  |||| |||| |||| |||||||||||||  ||||||||||  ||||   |||||||||||||||||    
T  51683088 agctccttccaaagacgtatccggggaataccaggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctctccacacgagccggattagtc 51682989  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    | ||| |  ||||| |  ||||||| ||||||||    
T  51682988 gcccaccaatggtgggtcggaaaccagtgcgaaa 51682955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 155
Target Start/End: Original strand, 26043835 - 26043923
Alignment:
Q  67 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    ||||||| ||||| ||||||||||  ||||| ||| |||||||||||||||  || |||||||| |   |||||||| |||||| ||||    
T  26043835 gaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgagtcagaaaccggggcgaaagccaa 26043923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 150
Target Start/End: Complemental strand, 26590366 - 26590267
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaa 149  Q
    |||| ||||||||| |||||||||||||||||||| ||||  |||||  |||||||  ||||| |||  | | ||||||| ||| |||||||||||||||    
T  26590366 gttcgattctcagggggaacaacgcttggtcagtgtgcatgcctctacacacgagctagattaatcgatcgtatttggtg-gatcggaaaccggtgcgaa 26590268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 33251635 - 33251739
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| ||||||||||||  | | |||| || |||| |||| | |  ||||||||| |||| ||||| ||||  ||||| ||| ||||||||||||||    
T  33251635 agctccttccaaggacgtattaggggaataccgggttcgattcccggtgggaacaacgtttggccagtgtgcatgcctctacgcatgagccggattagtc 33251734  T
Q  117 gtcca 121  Q
    |||||    
T  33251735 gtcca 33251739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 164
Target Start/End: Complemental strand, 34374525 - 34374429
Alignment:
Q  68 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaa 164  Q
    |||||| ||||||||||||||||  ||| | |||  || ||||||||||| || ||||||||| |  ||||||||||| |||| |||| || |||||    
T  34374525 aacaacacttggtcagtgcgcatgcctcaacgcataagtcggattagtcgcccttctttggtgggtcggaaaccggtgtgaaagccaaaaaaaaaaa 34374429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 41219566 - 41219661
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggatta 113  Q
    ||||||| | |||||||||| || ||| || | ||||| ||||||||||||||||||| |||| ||||||| ||  ||||  |||||||| ||||||    
T  41219566 agctccttctaaggacgtatacgggaa-taccaagttcgattctcaggaggaacaacgtttggccagtgcgtatgcctctgcgcacgagctggatta 41219661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 41630646 - 41630534
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| ||| |||||||  ||  ||||| || |||| |||| || | |||||||||||||  ||||||||||  |||||  || ||||||||||||||    
T  41630646 agctccttccatggacgtaaccggaaaataccgggttcaattcccaaggggaacaacgcttgcccagtgcgcatgcctctacacatgagccggattagtc 41630547  T
Q  117 gtccatctttggt 129  Q
    | ||| |||||||    
T  41630546 gcccacctttggt 41630534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 150
Target Start/End: Complemental strand, 45450532 - 45450448
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||||| |||||  ||||||||||  ||||| |||  |||  ||||||||||||| ||||| || | |||||||||||||||||    
T  45450532 ggaacaatgcttgaccagtgcgcatgcctctacgcataagctagattagtcgtccacctttgatgagttggaaaccggtgcgaaa 45450448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 150
Target Start/End: Original strand, 47471853 - 47471937
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||||| ||||||  |||||||||   |||| ||| |||||| |||||||||||| |||||||| |  |||||||| |||||||    
T  47471853 ggaacaatgcttggctagtgcgcatgcttctacgcatgagccgaattagtcgtccacctttggtgggtcggaaaccgatgcgaaa 47471937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 146
Target Start/End: Complemental strand, 55069764 - 55069684
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgc 146  Q
    ||||||||| |||| |||||| |||  ||||| ||||||||||||||| |||  || |||||||| |  ||||||||||||    
T  55069764 ggaacaacgtttggccagtgcacatgcctctacgcacgagccggattaatcgctcacctttggtgggtcggaaaccggtgc 55069684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 4e-28; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 27 - 150
Target Start/End: Complemental strand, 40780984 - 40780861
Alignment:
Q  27 aaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatcttt 126  Q
    |||||||||| ||  |||||||| |||| ||||||| | |||||||||||||||||||||||||  ||||| ||| ||||||||||||||||||| ||||    
T  40780984 aaggacgtattcggaaaatatcgggttcgattctcaaggggaacaacgcttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccaccttt 40780885  T
Q  127 ggtgtgatggaaaccggtgcgaaa 150  Q
    |||| |  ||||||||||||||||    
T  40780884 ggtgggtcggaaaccggtgcgaaa 40780861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 38166005 - 38166138
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| || | ||||  | |||  |||| |||| |||||||||||||| ||||||||||  ||||| ||||||||||||||||||    
T  38166005 agctccttccaaggacgtatccggggaatactgggttggattcccagggggaacaacgcttggccagtgcgcatggctctacgcacgagccggattagtc 38166104  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    | ||| |||||||| |  ||||||||||||||||    
T  38166105 gcccacctttggtgggtcggaaaccggtgcgaaa 38166138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 42722710 - 42722577
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || |||||| || |||| |||| ||||||||||||||||||| ||||||||||  ||||| ||| ||||||||||||||    
T  42722710 agctccttccaaggacgtacccgggaaataccgggttcaattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtc 42722611  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    || || |||| ||| |  | ||||||||||||||    
T  42722610 gttcacctttagtgggtcgaaaaccggtgcgaaa 42722577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 148
Target Start/End: Complemental strand, 1940907 - 1940779
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || ||||||||| |||| |||| |||| ||||||||||||||   ||||||||  ||||| ||||||||||||||||||    
T  1940907 agctccttccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacgcttgg---gtgcgcatgcctctacgcacgagccggattagtc 1940811  T
Q  117 gtccatctttggtgtgatggaaaccggtgcga 148  Q
    | ||| |||||||| |  | ||||||||||||    
T  1940810 gcccacctttggtgggtcgaaaaccggtgcga 1940779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 29895765 - 29895898
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| || | |||| || |||| |||| |||| |||||||| ||||| ||||||||||  ||||| ||| ||||||||||||||    
T  29895765 agctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 29895864  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||| | ||||||    ||||||||||||||||    
T  29895865 gtccaccattggtggttcggaaaccggtgcgaaa 29895898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 2559330 - 2559418
Alignment:
Q  62 aggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||||||||||||||||| ||||||||||  ||||| |||| |||||||||| ||||||| |||||||| |  ||||||||||||||||    
T  2559330 aggaggaacaacgcttggccagtgcgcatgcctctacgcacaagccggattactcgtccacctttggtgggtcggaaaccggtgcgaaa 2559418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 165
Target Start/End: Original strand, 4738640 - 4738744
Alignment:
Q  61 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaata 160  Q
    ||||||||||||||||| | |||||||||| |||||| ||| |||| | |||||||||||| |||||||| |  |||||||||||||||| |||| || |    
T  4738640 caggaggaacaacgctttgccagtgcgcatgtctctacgcatgagctgaattagtcgtccacctttggtgggtcggaaaccggtgcgaaagccaaaaaaa 4738739  T
Q  161 aaaaa 165  Q
    |||||    
T  4738740 aaaaa 4738744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 1446804 - 1446908
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| || | |||| || |||| |||| |||| |||||||| ||||| ||||||||||  ||||| ||| ||||||||||||||    
T  1446804 agctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 1446903  T
Q  117 gtcca 121  Q
    |||||    
T  1446904 gtcca 1446908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 150
Target Start/End: Complemental strand, 7246730 - 7246646
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||||||||||||| ||||||||||  ||||| ||| ||||||||||||||| ||| |||||||| |  ||||||||||||||||    
T  7246730 ggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 7246646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 145
Target Start/End: Original strand, 8889000 - 8889128
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| | |||||||||| || | |||| || |||| ||||  ||| |||||||| ||||| ||||||||||  ||||| ||| ||||||||||||||    
T  8889000 agctccttctaaggacgtatccggggaataccgggttcgattcctagggggaacaacacttgggcagtgcgcatggctctacgcatgagccggattagtc 8889099  T
Q  117 gtccatctttggtgtgatggaaaccggtg 145  Q
    ||||| |||||||| |  |||||||||||    
T  8889100 gtccacctttggtgggtcggaaaccggtg 8889128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 164
Target Start/End: Original strand, 53599038 - 53599185
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | |||| || |||| |||| |||||||||||||| |||| ||||||||||  ||||| ||| ||||||||||| ||    
T  53599038 agctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgtttggccagtgcgcatgcctctacgcatgagccggattaatc 53599137  T
Q  117 gtccatctttggtgtgat-ggaaaccggtgcgaaacccaagaataaaaa 164  Q
    || || |||| ||| ||| |||||||||||||||| |||| || |||||    
T  53599138 gttcacctttagtg-gatcggaaaccggtgcgaaagccaaaaaaaaaaa 53599185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 5472942 - 5472868
Alignment:
Q  56 attctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 130  Q
    ||||||||| | |||||||||||| ||||||||||  ||||| ||||||||||||||||||| ||| ||||||||    
T  5472942 attctcaggggaaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtg 5472868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 150
Target Start/End: Original strand, 43458630 - 43458724
Alignment:
Q  56 attctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||| ||||||||| ||||||||| ||||||||||  ||||| | ||||||||||||||||||||| ||||| || |  |||||||| |||||||    
T  43458630 attcccaggaggaagaacgcttggccagtgcgcatgcctctacggacgagccggattagtcgtccacctttgatgagtcggaaaccgttgcgaaa 43458724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 7741903 - 7742016
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    |||||||  |||| |||||| || | ||||||| |||| | ||||||| | |||||||||||| |||||| |||  ||||| |||||| || ||||||||    
T  7741903 agctcctttcaagtacgtattcgaggaatatcgggttccaatctcaggggtaacaacgcttggccagtgcacatgcctctacgcacgatccagattagtc 7742002  T
Q  117 gtccatctttggtg 130  Q
    ||||||||||||||    
T  7742003 gtccatctttggtg 7742016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 47078436 - 47078569
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | |||| || |||| |||| |||| |||||||||||||| |||||| |||  ||||| ||||||||||||||||||    
T  47078436 agctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtc 47078535  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |  || | |||||| |  ||||||| ||||||||    
T  47078536 gctcaccattggtgggtcggaaaccagtgcgaaa 47078569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 155
Target Start/End: Complemental strand, 49260749 - 49260660
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    |||||||||||||| ||||||||||  ||||| ||||||||||||||||||| ||| |||||||| |  ||||| |||||| ||| ||||    
T  49260749 ggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgaccacctttggtgggtcggaaatcggtgcaaaagccaa 49260660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 52950060 - 52950193
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||   | | ||||||| |||| |||| |||| |||||||||||||| ||||||||||  |||||  || || || ||||||||    
T  52950060 agctccttccaaggacgtacctggggaatatcgggttcgattcccagggggaacaacgcttggccagtgcgcatgactctacacatgaaccagattagtc 52950159  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||| |||||||| |  |||||||| |||||||    
T  52950160 gtccacctttggtgggtcggaaaccgatgcgaaa 52950193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 21429279 - 21429411
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||| ||||||| || | ||||||| |||| ||| | ||| ||||||||| || | ||||||||||  ||||| ||||||| | || |||||    
T  21429279 agctccttccaaagacgtatccgaggaatatcgggttcgatttttagggggaacaacgtttagccagtgcgcatgcctctacgcacgagtcagactagtc 21429378  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaa 149  Q
    ||||| |||||||| |  |||||||||||||||    
T  21429379 gtccacctttggtgggtcggaaaccggtgcgaa 21429411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 165
Target Start/End: Complemental strand, 36145340 - 36145200
Alignment:
Q  25 ccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatct 124  Q
    |||||||||||  || | |||| || |||| |||| |||| | ||||||||||| |||||||||||  |||||  || ||||||||||||||||||| ||    
T  36145340 ccaaggacgtacccggggaataccgggttcgattcccaggggaaacaacgcttgatcagtgcgcatgcctctacacatgagccggattagtcgtccacct 36145241  T
Q  125 ttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    ||| ||    |||||||||||||||| |||| || ||||||    
T  36145240 ttgatgaatcggaaaccggtgcgaaagccaaaaaaaaaaaa 36145200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 130
Target Start/End: Original strand, 6779223 - 6779302
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 130  Q
    |||| |||| |||| |||||||| | ||| ||||||||||  ||||||||| ||||||||||||||||||| ||||||||    
T  6779223 gttcgattcccagggggaacaacacctggccagtgcgcatgcctctatgcatgagccggattagtcgtccacctttggtg 6779302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 150
Target Start/End: Original strand, 16450312 - 16450411
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||| |||| |||| |||||||||||||| |||||| |||  ||||| ||| ||||| ||||||||||||| |||||||  |  ||||||||||||||||    
T  16450312 gttcgattcccagggggaacaacgcttggccagtgcacatgcctctacgcatgagccagattagtcgtccacctttggtaggtcggaaaccggtgcgaaa 16450411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 20128290 - 20128425
Alignment:
Q  20 tcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtc 119  Q
    |||| |||||||||||| || | ||||  | |||| ||||||||| ||||||| |||||| ||||||||||  || || ||||||||  |||||||||||    
T  20128290 tccttccaaggacgtatccggggaatactgggttcgattctcagggggaacaatgcttggccagtgcgcatgcctttacgcacgagctagattagtcgtc 20128389  T
Q  120 catctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    || | |||||| |   ||||||||||||||| ||||    
T  20128390 caccattggtgggtcagaaaccggtgcgaaagccaa 20128425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 20532516 - 20532429
Alignment:
Q  43 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 130  Q
    |||| ||||||| |||  ||||||||||||||||||| ||||||||||  ||||| ||| ||||||||| ||||| ||| ||||||||    
T  20532516 aataccgagttcgatttccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggataagtcgcccacctttggtg 20532429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 155
Target Start/End: Original strand, 38168282 - 38168372
Alignment:
Q  64 gaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    |||||||||||||||| |||||| |||  ||||| ||| |||||||||||||||| || |||| ||| | ||||||||||||||||| ||||    
T  38168282 gaggaacaacgcttggccagtgc-catgcctctacgcatgagccggattagtcgttcacctttagtgggttggaaaccggtgcgaaagccaa 38168372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 14859312 - 14859402
Alignment:
Q  60 tcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||||||||||| | |||  |||||||||| |||||| ||||||||| |||||||| |||| ||||| ||||  |||||| |||||||||    
T  14859312 tcaggaggaacaatgtttgaccagtgcgcatgtctctacgcacgagccagattagtcatccacctttgatgtgtcggaaactggtgcgaaa 14859402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 18531541 - 18531635
Alignment:
Q  61 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    |||| |||||||| ||||||||||||||||  ||| |||||||| || ||||| ||||||| |||| ||| |  |||||||||||||||| ||||    
T  18531541 cagggggaacaacacttggtcagtgcgcatgcctccatgcacgaaccagattattcgtccaccttttgtgggtcggaaaccggtgcgaaagccaa 18531635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 150
Target Start/End: Original strand, 38075414 - 38075544
Alignment:
Q  20 tcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtc 119  Q
    |||| |||||||||||| ||   |||| || |||| ||||||||| | |||||||||||| ||||||||||  ||||| ||| |||||| |||| | |||    
T  38075414 tccttccaaggacgtattcggagaataccgggttcgattctcaggggaaacaacgcttggccagtgcgcatgcctctacgcatgagccgaattaattgtc 38075513  T
Q  120 catctttggtgtgatggaaaccggtgcgaaa 150  Q
    || |||||||| |  |||||||| |||||||    
T  38075514 cacctttggtgggtcggaaaccgatgcgaaa 38075544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 47682475 - 47682382
Alignment:
Q  56 attctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||||||| |||| |||| |||| |||||| ||| |||||| ||||||||||| ||||||| ||| |||||||| |  ||||||||||||||||    
T  47682475 attctcagg-ggaataacgtttggccagtgcacatgtctctacgcacgagccgggttagtcgcccacctttggtgggtcggaaaccggtgcgaaa 47682382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 146
Target Start/End: Complemental strand, 48317365 - 48317279
Alignment:
Q  60 tcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgc 146  Q
    |||||||||||||||||||||||||| | ||  ||||| ||||||||||||||||||| ||| | ||| || | |||||||| ||||    
T  48317365 tcaggaggaacaacgcttggtcagtgtgtatgcctctacgcacgagccggattagtcgcccaccgttgatgggttggaaaccagtgc 48317279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 149
Target Start/End: Complemental strand, 295619 - 295534
Alignment:
Q  64 gaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaa 149  Q
    ||||||||||| |||| ||||||||||  ||||| |||||| || ||||||||||||| | |||||| | | ||||||||||||||    
T  295619 gaggaacaacgtttggccagtgcgcatgcctctacgcacgaaccagattagtcgtccaccgttggtgggtttgaaaccggtgcgaa 295534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 55921012 - 55921145
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| ||||||||| |  || | |||| || |||| |||| |||| |||||||| ||||||||||||||||  ||||| | | ||||||||||| ||    
T  55921012 agctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgtatgagccggattaatc 55921111  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |  || |||||||| |  ||||||||||||||||    
T  55921112 gctcacctttggtgggtcggaaaccggtgcgaaa 55921145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 155
Target Start/End: Original strand, 13073542 - 13073654
Alignment:
Q  43 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccg 142  Q
    |||| ||||||| |||| || | ||||||| | |||| ||||||||||| ||||| ||| || || ||||||||||  | |||||||| |  ||||||||    
T  13073542 aataccgagttcgattcccatggggaacaatgtttggccagtgcgcatacctctacgcatgaaccagattagtcgtttacctttggtgggtcggaaaccg 13073641  T
Q  143 gtgcgaaacccaa 155  Q
    |||||||||||||    
T  13073642 gtgcgaaacccaa 13073654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 150
Target Start/End: Original strand, 14124028 - 14124127
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||| |||| |||| ||||||||  |||| ||||||||||  |||||  ||||||||||||||||||  || | |||||| | |||||||||||||||||    
T  14124028 gttcgattcccagggggaacaacatttggccagtgcgcatgcctctacacacgagccggattagtcgctcaccattggtgggttggaaaccggtgcgaaa 14124127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 150
Target Start/End: Original strand, 43468359 - 43468458
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||| |||| |||| |||||||||||||| |||||| ||| |||||| ||| ||||||||||||||| ||| |  ||||| |  ||| ||||||||||||    
T  43468359 gttcgattcccagggggaacaacgcttggccagtgcacatttctctacgcatgagccggattagtcgcccaccagtggtgggtcggagaccggtgcgaaa 43468458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 49952279 - 49952145
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| || |||||||   |||  ||| |||| || ||||||| ||||||||||||||   ||||| ||| ||||||||||||||    
T  49952279 agctccttccaaggacgtattcgggaaatattaggtttgattttcagaagaaacaacgtttggtcagtgcgcacgcctctacgcatgagccggattagtc 49952180  T
Q  117 g-tccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |   || ||||| || | |||||||||||||||||    
T  49952179 gcgtcacctttgatgggttggaaaccggtgcgaaa 49952145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 126
Target Start/End: Complemental strand, 55703834 - 55703776
Alignment:
Q  68 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatcttt 126  Q
    ||||||| ||||||||||||||| |||| |  |||||||||||||||| ||||||||||    
T  55703834 aacaacgtttggtcagtgcgcatgtctcaacccacgagccggattagttgtccatcttt 55703776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 3159558 - 3159473
Alignment:
Q  61 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgc 146  Q
    |||| |||||||||||||| ||||||||||  ||||| ||||||||| |||||||||  || | |||||| |  ||||||||||||    
T  3159558 cagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccagattagtcgctcaccattggtgggtcggaaaccggtgc 3159473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 27248406 - 27248516
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| || | |||| || |||| | || ||||||||||||||||||| ||  ||||||  ||||| ||| ||||| ||||||||    
T  27248406 agctccttccaaggacgtatccggggaataccgggttcgagtcccaggaggaacaacgcttggcca--gcgcatgcctctacgcaggagccagattagtc 27248503  T
Q  117 gtccatctttggt 129  Q
    | ||| |||||||    
T  27248504 gcccacctttggt 27248516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 155
Target Start/End: Original strand, 33647749 - 33647837
Alignment:
Q  67 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaacccaa 155  Q
    ||||||||||||  |||||| |||  ||||| |||||| || |||||||||| ||||||||||| ||| |||||||||||||||| ||||    
T  33647749 gaacaacgcttgaccagtgcacattcctctacgcacgaaccagattagtcgttcatctttggtg-gatcggaaaccggtgcgaaaaccaa 33647837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 3507297 - 3507361
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 130  Q
    ||||||||||||||  ||||||| |  |||||  |||||||||||||||||||||| ||||||||    
T  3507297 ggaacaacgcttggctagtgcgcgtgcctctacacacgagccggattagtcgtccacctttggtg 3507361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 14077963 - 14078023
Alignment:
Q  56 attctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    |||| |||||| |||| | |||||||||||||||| |||||| ||||||| ||||||||||    
T  14077963 attcacaggagaaacatcacttggtcagtgcgcatgtctctacgcacgagtcggattagtc 14078023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 36262851 - 36262787
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 130  Q
    |||||||||||||| |||||| |||  ||||| ||||||| ||||||||||| ||| ||||||||    
T  36262851 ggaacaacgcttggccagtgcacatgcctctacgcacgagtcggattagtcgcccacctttggtg 36262787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 17080070 - 17080121
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcg 117  Q
    |||||||||||||| ||||||||||  ||||| ||| |||||||||||||||    
T  17080070 ggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcg 17080121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 130
Target Start/End: Original strand, 30317245 - 30317324
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 130  Q
    |||| ||||||||  |||||||||||||| |||| || ||  ||||| |||||||||| |||||||| ||| ||||||||    
T  30317245 gttcgattctcagagggaacaacgcttggccagtacgaatgcctctacgcacgagccgaattagtcgcccacctttggtg 30317324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 121
Target Start/End: Complemental strand, 42722463 - 42722408
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtcca 121  Q
    |||||||| ||||  ||||||||||| ||||||||| ||| |||||||||||||||    
T  42722463 ggaacaacacttgaccagtgcgcatacctctatgcatgagtcggattagtcgtcca 42722408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 3574553 - 3574479
Alignment:
Q  43 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcg 117  Q
    |||| ||||||| |||| ||||  ||||||| ||||| ||||||||||  ||||| ||||||| |||||||||||    
T  3574553 aataccgagttcaattcccagggagaacaacacttggccagtgcgcatgcctctacgcacgagtcggattagtcg 3574479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 127
Target Start/End: Complemental strand, 41163015 - 41162905
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| || |||||| ||||||| |||  |||  |||||||| ||||| |||||  |||   |||||||| |||||| |||||||    
T  41163015 agctccttccaaggacgtatccgggaaataccgagttcgatttccagagggaacaacacttggccagtgtacatgcttctatgcatgagccgaattagtc 41162916  T
Q  117 gtccatctttg 127  Q
    | ||| |||||    
T  41162915 gcccacctttg 41162905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 33109300 - 33109400
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgct--tggtcagtgcgcatatctctatgcacgagccggattag 114  Q
    ||||||| ||||||| |||| || |  |||||| |||| |||| || || ||||||||||  ||| |||| ||||| |||||| ||||||||||||||||    
T  33109300 agctccttccaaggaggtatccgggggatatcgggttcaattcccatgaagaacaacgctcttggccagtacgcatgtctctacgcacgagccggattag 33109399  T
Q  115 t 115  Q
    |    
T  33109400 t 33109400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 48015157 - 48015108
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagt 115  Q
    |||||||||||||| |||||||||   ||||| |||||||||||||||||    
T  48015157 ggaacaacgcttggccagtgcgcaagcctctacgcacgagccggattagt 48015108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 13552092 - 13552148
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaac 73  Q
    ||||||| ||||| |||||| || | ||||||| |||| ||||||||||||||||||    
T  13552092 agctccttccaagcacgtatccggggaatatcgggttcgattctcaggaggaacaac 13552148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 3e-26; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 2467251 - 2467103
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| || | |||| || |||| |||  |||| |||||||| ||||| |||||||||| |||||||||| ||||||||||||||    
T  2467251 agctccttccaaggacgtatccggggaataccgggttcgatttccagggggaacaactcttggccagtgcgcatgtctctatgcatgagccggattagtc 2467152  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    |||||   ||||||||  |||||||||||||||| |||| || ||||||    
T  2467151 gtccacaattggtgtgtcggaaaccggtgcgaaagccaaaaaaaaaaaa 2467103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 129
Target Start/End: Original strand, 22958755 - 22958859
Alignment:
Q  25 ccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatct 124  Q
    |||||||||||   ||| |||||||| ||| ||| ||||  ||||||| |||||||||||| |||| |||||||||| ||||||||||||||||||| ||    
T  22958755 ccaaggacgtacctgtggaatatcgaattcgattttcagagggaacaatgcttggtcagtgtgcatgtctctatgcatgagccggattagtcgtccacct 22958854  T
Q  125 ttggt 129  Q
    |||||    
T  22958855 ttggt 22958859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 166
Target Start/End: Complemental strand, 15884688 - 15884540
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||   | | |||| || |||| |||| |||| |||||||| |||||  |||||||||  ||||| ||||||||||||||||||    
T  15884688 agctccttccaaggacgtacctggggaataccgggttcgattcccagg-ggaacaacacttggcaagtgcgcatgcctctacgcacgagccggattagtc 15884590  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaac 166  Q
    | ||| |||||||| |  |||||||||||||||| |||| || |||||||    
T  15884589 gcccacctttggtgggtcggaaaccggtgcgaaaaccaaaaaaaaaaaac 15884540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 36914566 - 36914453
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| | |||||||||  || |||||||||| ||| ||| ||||||||||||||||||| ||||||| |||||| ||||||| |||  |||||||||    
T  36914566 agctccttctaaggacgtactcgggaaatatcgaattcgattttcaggaggaacaacgcttgatcagtgcacatatcactatgcatgagttggattagtc 36914467  T
Q  117 gtccatctttggtg 130  Q
     |||| | ||||||    
T  36914466 atccaccattggtg 36914453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 150
Target Start/End: Original strand, 43032902 - 43033011
Alignment:
Q  41 gaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaac 140  Q
    |||||||||  ||| |||| |||| |||||||||||||| ||||||||||  |||||  |||||||||||||||||| ||| |||||||| |   |||||    
T  43032902 gaaatatcggattcgattcccagggggaacaacgcttggccagtgcgcatgcctctacacacgagccggattagtcgcccacctttggtgggtcagaaac 43033001  T
Q  141 cggtgcgaaa 150  Q
    ||||||||||    
T  43033002 cggtgcgaaa 43033011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 150
Target Start/End: Complemental strand, 4479380 - 4479296
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||||||||||||| ||||||||||  ||||| ||| |||| |||||||||||||| |||||||| |  ||||||||||||||||    
T  4479380 ggaacaacgcttggccagtgcgcatgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 4479296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 165
Target Start/End: Original strand, 10927628 - 10927731
Alignment:
Q  62 aggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataa 161  Q
    |||||||||||||||||| ||||||||||  ||||| ||| |||||||||||||||| || |||| ||| |  |||||||| ||||||| |||| || ||    
T  10927628 aggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccgatgcgaaagccaaaaaaaa 10927727  T
Q  162 aaaa 165  Q
    ||||    
T  10927728 aaaa 10927731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 6100449 - 6100587
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    |||||||  ||||||||||| || | |||| || |||| |||| ||||||||||||||||||| ||||||||||  | ||| ||| ||||||||||||||    
T  6100449 agctcctttcaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgccactacgcatgagccggattagtc 6100548  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    || || |||| ||| |  | |||||| ||||||| ||||    
T  6100549 gttcacctttagtgggtcgaaaaccgctgcgaaagccaa 6100587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 130
Target Start/End: Original strand, 18374021 - 18374100
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 130  Q
    |||| |||||||||  ||||||||||||  ||||||||||  ||||| ||| ||||||||||||||||||| ||||||||    
T  18374021 gttcgattctcagggagaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccaactttggtg 18374100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 150
Target Start/End: Original strand, 43027316 - 43027415
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||| |||| |||||||||||||| |||  || |||||||  ||||| ||| ||||||||||||||||||||||||| || |  |||||||| |||||||    
T  43027316 gttcgattcccaggaggaacaacgattgtccaatgcgcatgcctctacgcatgagccggattagtcgtccatctttgatgggtcggaaaccgatgcgaaa 43027415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 13358047 - 13357941
Alignment:
Q  59 ctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaa 158  Q
    |||||| ||||||||| |||| || || ||||  ||||||||||||||||||||||||||||  |||| ||| |  |||||||||||| ||| |||| ||    
T  13358047 ctcagggggaacaacgtttggccaatgtgcatgcctctatgcacgagccggattagtcgtccccctttagtgggtcggaaaccggtgcaaaaaccaaaaa 13357948  T
Q  159 taaaaaa 165  Q
     ||||||    
T  13357947 aaaaaaa 13357941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 14846553 - 14846698
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| | |||||||||  || | |||| || |||| ||||||||| ||||||| | |||||||||||||||  ||||| ||| ||| | ||| ||||    
T  14846553 agctccttctaaggacgtacccggggaataccgggttcgattctcagg-ggaacaatgattggtcagtgcgcatgcctctacgcatgagtcagataagtc 14846651  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaa 163  Q
    ||||| |||||||| |  ||||| |||||||||| |||| |||||||    
T  14846652 gtccacctttggtgggtcggaaatcggtgcgaaagccaaaaataaaa 14846698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 3418646 - 3418513
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| ||||||||||||  | | ||||||| |||| ||| | |||||||||||| ||||| ||||||||||   |||| ||| ||| | ||||||||    
T  3418646 agctccttccaaggacgtatctggggaatatcgggttcgatttttaggaggaacaacacttggccagtgcgcatgcgtctacgcatgagtcagattagtc 3418547  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||| |||| ||| |   |||||||||||||||    
T  3418546 gtccacctttagtgggtcagaaaccggtgcgaaa 3418513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 13359024 - 13359093
Alignment:
Q  42 aaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggat 111  Q
    ||||| || |||| |||||||| ||||||||||||||| ||||||||||| ||||| ||||||| |||||    
T  13359024 aaataccgggttcgattctcagaaggaacaacgcttggacagtgcgcatacctctacgcacgagtcggat 13359093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 24837219 - 24837367
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| ||||| |||||  || | |||| || |||| |||| ||||  ||||||||||||| |||||  |||  ||||| |||||||| |||||||||    
T  24837219 agctccttccaagtacgtacccggggaataccgtgttcgattcccagggagaacaacgcttggccagtgttcatgcctctaagcacgagcaggattagtc 24837318  T
Q  117 gtccatctttggtgtgat-ggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    ||||| |||||||| ||| |||||| ||||||||| |||| || ||||||    
T  24837319 gtccacctttggtg-gatcggaaactggtgcgaaagccaaaaaaaaaaaa 24837367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 155
Target Start/End: Original strand, 2964100 - 2964191
Alignment:
Q  64 gaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    |||||||||||||||| || || ||||  ||||| |||||| |||||||||||| ||| |||||||| |   ||||||||||||||| ||||    
T  2964100 gaggaacaacgcttggccaatgtgcatgcctctacgcacgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagccaa 2964191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 23895595 - 23895678
Alignment:
Q  67 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||||||||||| ||||||||||| ||||| |||||||  |||||| ||||||| ||||| || |  |||||| |||||||||    
T  23895595 gaacaacgcttggccagtgcgcatacctctacgcacgagatggattaatcgtccacctttgatgggtcggaaacgggtgcgaaa 23895678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 13085501 - 13085607
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| || | |||| || |||| ||||||||  ||||||||| || | ||||| ||||| ||||| ||||||||| ||||| ||    
T  13085501 agctccttccaaggacgtatccggggaataccgggttcgattctcagagggaacaacgtttagccagtgtgcatacctctacgcacgagccagattaatc 13085600  T
Q  117 gtccatc 123  Q
    | |||||    
T  13085601 gcccatc 13085607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 17981418 - 17981551
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| ||||||| |||  || |||||| || |||| |||| |||| |||||||| ||||  ||||| ||||  ||||| ||||||| || ||||||     
T  17981418 agctccttccaaggatgtacccgggaaataccgggttcgattcccagggggaacaactcttgaccagtgtgcatgcctctacgcacgagtcgaattagtt 17981517  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    | ||| |||||||| |  ||||||||||||||||    
T  17981518 gcccagctttggtgagtcggaaaccggtgcgaaa 17981551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 8587034 - 8586978
Alignment:
Q  55 tattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggat 111  Q
    ||||| |||| |||||||||||||| ||||||||||| ||||| ||| |||||||||    
T  8587034 tattcccagggggaacaacgcttggccagtgcgcatacctctacgcatgagccggat 8586978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 150
Target Start/End: Original strand, 45521194 - 45521278
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||||||| |||| |||||||||||  ||||| ||| |||||||||||||||  || ||||| || |  ||||||||||||||||    
T  45521194 ggaacaacacttgatcagtgcgcatgcctctacgcatgagccggattagtcgctcacctttgatgggtcggaaaccggtgcgaaa 45521278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 168
Target Start/End: Original strand, 26570925 - 26571052
Alignment:
Q  41 gaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaac 140  Q
    ||||||||| |||| ||||  ||| |||||||||||||| ||||| | ||   |||| ||| ||||||||||||||||||| ||||| || |  ||||||    
T  26570925 gaaatatcgggttcaattcctagggggaacaacgcttggccagtgtgtatgcatctacgcatgagccggattagtcgtccacctttgatgagtcggaaac 26571024  T
Q  141 cggtgcgaaacccaagaataaaaaacga 168  Q
    || || |||| |||| || ||| |||||    
T  26571025 cgatgtgaaagccaaaaaaaaataacga 26571052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 8803096 - 8803178
Alignment:
Q  82 agtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaa 164  Q
    |||||||| | ||||| ||||||||||||||||||| |||||  ||||| |  |||||||| ||||||| |||| || |||||    
T  8803096 agtgcgcagacctctacgcacgagccggattagtcgcccatcaatggtgggtcggaaaccgatgcgaaagccaaaaaaaaaaa 8803178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 146
Target Start/End: Complemental strand, 68231 - 68102
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| ||||||||||   || | || |||| |||| ||||||||||||||||||| |||| ||||  ||||  || ||  |||||||||||||| ||    
T  68231 agctccttccaaggacgtgctcggggaagatcgggttcgattctcaggaggaacaacgtttggccagtatgcatgcctttacacacgagccggattaatc 68132  T
Q  117 gtccatctttggtgtgatggaaaccggtgc 146  Q
    || || ||||| || |  ||||||||||||    
T  68131 gttcacctttgatgggtcggaaaccggtgc 68102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 155
Target Start/End: Original strand, 583838 - 583927
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    |||||||||||||  ||||||||||  ||||| ||| ||| ||||||||||| ||| ||||| ||   | ||||||||||||||| ||||    
T  583838 ggaacaacgcttgaccagtgcgcatgcctctacgcatgagtcggattagtcgcccacctttgatggattagaaaccggtgcgaaagccaa 583927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 130
Target Start/End: Original strand, 8141087 - 8141192
Alignment:
Q  25 ccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatct 124  Q
    |||||||||||| || | |||| || |||| |||  |||| | |||||||||||| ||||||||||  ||||| ||| |||| | ||||||||||||  |    
T  8141087 ccaaggacgtattcggggaataccgggttcgatttccaggggaaacaacgcttggccagtgcgcatgcctctacgcatgagctgaattagtcgtccacat 8141186  T
Q  125 ttggtg 130  Q
    ||||||    
T  8141187 ttggtg 8141192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 150
Target Start/End: Complemental strand, 14666196 - 14666071
Alignment:
Q  25 ccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatct 124  Q
    |||||||||||| || | |||| || |||| |||| |||| | |||||| ||||| ||||||||||  ||||| |||| |||| ||||||||| |||       
T  14666196 ccaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctctacgcacaagccagattagtcgcccacag 14666097  T
Q  125 ttggtgtgatggaaaccggtgcgaaa 150  Q
    |||||| |  | ||||||||||||||    
T  14666096 ttggtgggtcgaaaaccggtgcgaaa 14666071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 150
Target Start/End: Complemental strand, 8997628 - 8997544
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||||||| || | |||| |||||  || || ||| ||||| |||||||||| ||||||||||| |  ||||||||||||||||    
T  8997628 ggaacaacgtttcgccagttcgcatgcctatacgcatgagccagattagtcgttcatctttggtgggtcggaaaccggtgcgaaa 8997544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 16893916 - 16894050
Alignment:
Q  19 ctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgt 118  Q
    ||||| |||| ||||||| || | ||||||| |||| |||| |||| |||| ||||||||| |||| | |||  || || ||| |||||||||| ||||     
T  16893916 ctccttccaatgacgtatccggggaatatcgggttcgattcacagggggaataacgcttggccagtacacatgcctttacgcatgagccggatt-gtcgc 16894014  T
Q  119 ccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    ||| |||||||| |  |||||||||||||||| ||||    
T  16894015 ccacctttggtg-gtcggaaaccggtgcgaaagccaa 16894050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 21174167 - 21174215
Alignment:
Q  67 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagt 115  Q
    ||||||||||||||||||||||||  ||||| |||  ||||||||||||    
T  21174167 gaacaacgcttggtcagtgcgcatggctctacgcatcagccggattagt 21174215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 21898625 - 21898773
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| || | |||| || |||| |||| ||||||||||||||||||| ||||||||||  ||||| ||| ||||||||||||||    
T  21898625 agctccttccaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtc 21898724  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    || || |||| ||| |  |||||||||||||||| |||| || ||||||    
T  21898725 gttcacctttagtgggtcggaaaccggtgcgaaagccaaaaaaaaaaaa 21898773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 6606230 - 6606082
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| || | |||| || |||| ||||||||| |||||||| ||||| |||||  |||  ||||| ||| ||||||||||||||    
T  6606230 agctccttccaaggacgtatccggggaataccgggttcgattctcagggggaacaacacttggccagtgtacatgcctctacgcatgagccggattagtc 6606131  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    ||||| | |||||| |  |||||||||||||||| |||| || ||||||    
T  6606130 gtccaccattggtgggtcggaaaccggtgcgaaagccaaaaaaaaaaaa 6606082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 61 - 164
Target Start/End: Original strand, 12606451 - 12606554
Alignment:
Q  61 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaata 160  Q
    |||| ||||||||| |||| ||||||||||  ||||| ||||||||||||||||||| ||| |||||||| | ||||||||||||||||| |||| || |    
T  12606451 cagggggaacaacgtttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgagctggaaaccggtgcgaaagccaaaaaaa 12606550  T
Q  161 aaaa 164  Q
    ||||    
T  12606551 aaaa 12606554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 150
Target Start/End: Original strand, 3601100 - 3601194
Alignment:
Q  56 attctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||||||| |||||||||||||| ||||||||||  || ||  |||||||||||||||||||||| |||||||| |  ||||||||||||||||    
T  3601100 attctcagggggaacaacgcttggccagtgcgcatgcctatacacacgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 3601194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 13036137 - 13036004
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| || | ||||||| |||| ||| ||||| |||||||| ||||| ||||||||||  ||||| ||| ||||| ||||||||    
T  13036137 agctccttccaaggacgtattcggggaatatcgggttcgattttcagggggaacaacacttggccagtgcgcatgcctctacgcatgagccagattagtc 13036038  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||||   |||||| |  ||||||||||||||||    
T  13036037 gtccactattggtgggtcggaaaccggtgcgaaa 13036004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 67 - 155
Target Start/End: Complemental strand, 9633708 - 9633620
Alignment:
Q  67 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    ||||||||||||| ||||||||||  ||||| ||||||||||||||||||| ||| |||||||| |  |||||||||||||||| ||||    
T  9633708 gaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagccaa 9633620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 164
Target Start/End: Complemental strand, 30788984 - 30788839
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| ||||||| |||| || | ||||||| |||  ||||||| |  |||||||| |||| ||||||||||  ||||| ||||||||||||||||||    
T  30788984 agctccttccaaggatgtatccggggaatatcgggtttgattctcatg--gaacaacgtttggccagtgcgcatgcctctaggcacgagccggattagtc 30788887  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaa 164  Q
    | ||| |||||||| |  |||||||||||||||| |||| || |||||    
T  30788886 gcccacctttggtgggtcggaaaccggtgcgaaagccaaaaaaaaaaa 30788839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 127
Target Start/End: Complemental strand, 2271434 - 2271326
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| || | |||| || |||| ||||||||   ||||||||||| | |||||||||| |||||| ||||||||||||||||||    
T  2271434 agctccttccaaggacgtattcggggaataccgggttcgattctcaga--gaacaacgcttagccagtgcgcatgtctctacgcacgagccggattagtc 2271337  T
Q  117 gtccatctttg 127  Q
    ||||| |||||    
T  2271336 gtccacctttg 2271326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 13468910 - 13469048
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| || | |||| |  |||| ||||  ||| ||||||||| ||||||||||| |||  ||||| ||||||||| ||||||||    
T  13468910 agctccttccaaggacgtatccggggaataccaggttcaattcctagggggaacaacgattggtcagtgcacatgcctctacgcacgagccagattagtc 13469009  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    | ||| | |||||| | ||||||||||||||||| ||||    
T  13469010 gcccaccattggtgggttggaaaccggtgcgaaagccaa 13469048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 5253356 - 5253223
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | |||| || |||| |||| |||| |||||||| ||||| ||||||||||  ||||| ||| ||||||||||| ||    
T  5253356 agctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattaatc 5253257  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    | ||| |||||||| |  ||||||||||||||||    
T  5253256 gcccacctttggtgggtcggaaaccggtgcgaaa 5253223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 19089514 - 19089622
Alignment:
Q  56 attctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    |||| |||| |||||||| ||||| ||||| ||||  ||||| ||||||||||||||||||||| | |||||||| |  |||||||||||||||| ||||    
T  19089514 attcccagggggaacaacacttggccagtgagcatgcctctacgcacgagccggattagtcgtctacctttggtgggtcggaaaccggtgcgaaagccaa 19089613  T
Q  156 gaataaaaa 164  Q
     || |||||    
T  19089614 aaaaaaaaa 19089622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 155
Target Start/End: Complemental strand, 14107491 - 14107353
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||| ||||||| || | |||| || |||| |||| ||||||||||||||||||  |||||| |||  ||||| ||| ||||||||||||||    
T  14107491 agctccttccaaagacgtattcggggaataccgggttcgattcccaggaggaacaacgcttgaccagtgcacatgcctctacgcatgagccggattagtc 14107392  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    | ||||  || ||| |  |||||||||||||||| ||||    
T  14107391 gcccattattagtgggtcggaaaccggtgcgaaagccaa 14107353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 155
Target Start/End: Complemental strand, 29444849 - 29444760
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    |||||||||||||| ||||||||||  ||||| ||| ||||||||||||| |||||||||||||| |  ||||||  |||||||| ||||    
T  29444849 ggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagttgtccatctttggtgggtcggaaactagtgcgaaagccaa 29444760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 165
Target Start/End: Original strand, 5029818 - 5029942
Alignment:
Q  41 gaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaac 140  Q
    |||| |||| |||| |||||||||  |||||||| |||||||||||||||  ||||| ||| |||  |||||||||| ||||||||| || |  ||||||    
T  5029818 gaaacatcgggttcgattctcagggagaacaacgtttggtcagtgcgcatgcctctacgcatgagttggattagtcgcccatctttgatgggtcggaaac 5029917  T
Q  141 cggtgcgaaacccaagaataaaaaa 165  Q
     ||||||||| |||| || ||||||    
T  5029918 tggtgcgaaagccaaaaaaaaaaaa 5029942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 19230643 - 19230579
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 130  Q
    |||||||||||||||||||  ||||  ||||| |||||||||||||||||||| |||| ||||||    
T  19230643 ggaacaacgcttggtcagtatgcatgcctctacgcacgagccggattagtcgttcatcattggtg 19230579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 164
Target Start/End: Original strand, 30410453 - 30410569
Alignment:
Q  48 cgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcg 147  Q
    ||||||| |||||||||||||||||| |||   ||||||||||  ||||| ||| |||| |||||| |||  ||||||||||| |  |||||||| ||||    
T  30410453 cgagttcgattctcaggaggaacaacacttaaccagtgcgcatgcctctacgcatgagctggattaatcgctcatctttggtgggtcggaaaccgatgcg 30410552  T
Q  148 aaacccaagaataaaaa 164  Q
    ||| | || ||||||||    
T  30410553 aaagcaaaaaataaaaa 30410569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 34954718 - 34954642
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttg 127  Q
    |||| ||||||||| ||||||||| |||| |||||| |||| ||||| ||| ||||| ||||||||||||| |||||    
T  34954718 gttcgattctcagggggaacaacgtttggccagtgcacatacctctacgcatgagccagattagtcgtccacctttg 34954642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 8932641 - 8932776
Alignment:
Q  20 tcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtc 119  Q
    |||| ||||||| |||| || | ||||||| |||| |||| |||| |||||||| |||||  |||||||||  ||||| ||| ||||||||||| ||  |    
T  8932641 tccttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgcgcatgcctctacgcatgagccggattaatcacc 8932740  T
Q  120 catctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    || ||||| || |  |||||||||||||||| ||||    
T  8932741 cacctttgatgggtcggaaaccggtgcgaaagccaa 8932776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 8944107 - 8944242
Alignment:
Q  20 tcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtc 119  Q
    |||| ||||||| |||| || | ||||||| |||| |||| |||| |||||||| |||||  |||||||||  ||||| ||| ||||||||||| ||  |    
T  8944107 tccttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgcgcatgcctctacgcatgagccggattaatcacc 8944206  T
Q  120 catctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    || ||||| || |  |||||||||||||||| ||||    
T  8944207 cacctttgatgggtcggaaaccggtgcgaaagccaa 8944242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 155
Target Start/End: Complemental strand, 8612107 - 8611969
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | |||| || |||| ||||  |||||||||||||||||  ||||| ||||   |||| ||| || |||||||||||    
T  8612107 agctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttctacgcatgaaccggattagtc 8612008  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    | ||| |||||||| |   ||||||||||||||| ||||    
T  8612007 gcccacctttggtgggtcagaaaccggtgcgaaagccaa 8611969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 10396499 - 10396549
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||||| |||| ||||||||||||||||||||| ||| ||||||||||    
T  10396499 ggaacaacgtttggccagtgcgcatatctctatgcatgagtcggattagtc 10396549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 165
Target Start/End: Complemental strand, 8149843 - 8149782
Alignment:
Q  104 agccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    ||||| |||||||||||| |||||||| | ||||||||||||||||| |||| || ||||||    
T  8149843 agccgaattagtcgtccacctttggtgggttggaaaccggtgcgaaaaccaaaaaaaaaaaa 8149782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 12635792 - 12635929
Alignment:
Q  18 gctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcg 117  Q
    |||||| |||||||||||| || | |||| |  |||  |||| |||| | ||||||||||||  |||||||||  ||||| |||| ||||||||||||||    
T  12635792 gctccttccaaggacgtatccggggaataccaggtttgattcccaggggaaacaacgcttggctagtgcgcatgcctctacgcacaagccggattagtcg 12635891  T
Q  118 tccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
     |||   |||||| |  |||||||||||||||| ||||    
T  12635892 cccactattggtgggtcggaaaccggtgcgaaagccaa 12635929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 10311602 - 10311514
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgag 105  Q
    ||||||| ||||| |||||| || | |||| || |||| || |||| | |||||||||||||| |||||||||| |||||| |||||||    
T  10311602 agctccttccaagaacgtatccggggaataccgggttcgatcctcaaggggaacaacgcttggccagtgcgcatgtctctacgcacgag 10311514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 32157251 - 32157187
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 130  Q
    |||||||| ||||  ||||||||||| ||||| ||| ||||| |||||||| |||||||||||||    
T  32157251 ggaacaacacttgaccagtgcgcatacctctacgcatgagccagattagtcatccatctttggtg 32157187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 8888910 - 8888969
Alignment:
Q  68 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttg 127  Q
    ||||||| |||| ||||||||||| ||||| ||| ||| ||||||||||||||| |||||    
T  8888910 aacaacgtttggccagtgcgcatacctctacgcatgagtcggattagtcgtccacctttg 8888969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 150
Target Start/End: Original strand, 8938722 - 8938821
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||| |||| ||||||||||||| ||||  |||||||||    |||| ||| |||||| |||||||||||| ||||| || |  ||||||||||||||||    
T  8938722 gttcgattcccaggaggaacaacacttgaccagtgcgcaagcatctacgcatgagccgaattagtcgtccacctttgatgggtcggaaaccggtgcgaaa 8938821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 127
Target Start/End: Original strand, 33940027 - 33940098
Alignment:
Q  56 attctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttg 127  Q
    |||||||||||||||||  |||   || |||||||  |||||  ||||||||||||||||||||||||||||    
T  33940027 attctcaggaggaacaatacttaaccattgcgcatgcctctacacacgagccggattagtcgtccatctttg 33940098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 14783477 - 14783415
Alignment:
Q  93 ctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    ||||| ||| ||||||||||||||||||| | |||||| |  |||||||||||||||| ||||    
T  14783477 ctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagccaa 14783415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 150
Target Start/End: Original strand, 31129193 - 31129287
Alignment:
Q  56 attctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||| |||| ||| ||||||||||  |||||||||  ||||| ||| ||||| ||||||| || || |||||||| |  ||||||||||||||||    
T  31129193 attcacagggggagcaacgcttggctagtgcgcatgcctctacgcatgagccagattagttgtgcacctttggtgagtcggaaaccggtgcgaaa 31129287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 3588029 - 3587976
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtc 119  Q
    |||||||||||||| |||||| |||| ||||| ||| || ||||||||||||||    
T  3588029 ggaacaacgcttggccagtgcacatacctctacgcatgaaccggattagtcgtc 3587976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 9366507 - 9366459
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattag 114  Q
    |||| ||||||||| ||||||||||  ||||| ||||||||||||||||    
T  9366507 ggaataacgcttggccagtgcgcatgcctctacgcacgagccggattag 9366459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 165
Target Start/End: Original strand, 11142604 - 11142728
Alignment:
Q  41 gaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaac 140  Q
    |||||| ||||||| |||| |||  | ||||||| |||  ||||||||||  ||||| ||| ||| | ||||||| ||||| |||||||| |  ||| ||    
T  11142604 gaaataccgagttcgattcgcagtggaaacaacgtttgaccagtgcgcatgcctctacgcatgagtcagattagttgtccaactttggtgggtcggagac 11142703  T
Q  141 cggtgcgaaacccaagaataaaaaa 165  Q
    |||||||||| |||| || ||||||    
T  11142704 cggtgcgaaaaccaaaaaaaaaaaa 11142728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 13391312 - 13391368
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccat 122  Q
    ||||||| | |||| ||||||||||  ||||| ||||||||||||||||||| ||||    
T  13391312 ggaacaatgtttggccagtgcgcatgcctctacgcacgagccggattagtcgcccat 13391368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 42770784 - 42770671
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| || |||||| || |||| ||||||||| |||||||||||||| ||||||||||  ||||  ||||||||||||||| ||    
T  42770784 agctccttccaaggacgtatccgagaaataccgggttcaattctcagggggaacaacgcttggccagtgcgcatgcctcttcgcacgagccggattaatc 42770685  T
Q  117 gtccatctttggtg 130  Q
    ||||| ||||||||    
T  42770684 gtccacctttggtg 42770671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 10823033 - 10823181
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | |||| || |||  |||| ||||||||||||||||||| ||||||||||  ||||| ||||||||||||||||||    
T  10823033 agctccttccaaggacgtacccggggaataccgggtttgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtc 10823132  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    | ||| |||| ||| |  |||||||||||||||| |||| || ||||||    
T  10823133 gcccaccttttgtgggtcggaaaccggtgcgaaagccaaaaaaaaaaaa 10823181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 2550841 - 2550974
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    |||||||  ||||||||||| || | ||||||| |||| |||| ||||||||||||| ||| | |||||||||| |||||| ||| ||||||||||||||    
T  2550841 agctccttacaaggacgtatccggggaatatcgggttcgattcccaggaggaacaacacttagccagtgcgcatgtctctacgcatgagccggattagtc 2550940  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    | |||  ||||||| | || ||||||||||||||    
T  2550941 gcccacttttggtgggttgaaaaccggtgcgaaa 2550974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 150
Target Start/End: Complemental strand, 25540488 - 25540404
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||||||||||||| ||||||||||  ||||| ||||||||||||||||||||||| |||||||| |  ||||||||||||||||    
T  25540488 ggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 25540404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 41220608 - 41220756
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | |||| || |||| |||| ||||||||||||||||||| ||||||||||  ||||| ||| |||||| |||||||    
T  41220608 agctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccgaattagtc 41220707  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    || || |||| ||| |  |||||||||||||||| |||| || ||||||    
T  41220708 gttcacctttagtgggtcggaaaccggtgcgaaagccaaaaaaaaaaaa 41220756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 150
Target Start/End: Complemental strand, 14169734 - 14169609
Alignment:
Q  25 ccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatct 124  Q
    |||||||||||| || | ||||||| |||| |||||| || |||||||| ||||  |||||||||| |||||| ||| ||||||||||||||||| | |     
T  14169734 ccaaggacgtattcggggaatatcgggttcgattctccgggggaacaacacttgaccagtgcgcatgtctctacgcatgagccggattagtcgtctacca 14169635  T
Q  125 ttggtgtgatggaaaccggtgcgaaa 150  Q
    |||||| |  ||||||||||||||||    
T  14169634 ttggtgggtcggaaaccggtgcgaaa 14169609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 7747247 - 7747395
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| || | |||| || |||| ||||  ||||||||||||| |||| ||||| ||||  ||||| ||| ||||||||||||||    
T  7747247 agctccttccaaggacgtatccggggaataccgggttcgattcctaggaggaacaacgtttggccagtgtgcatgcctctacgcatgagccggattagtc 7747346  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    || || |||| ||| |  |||||||||||||||| |||| || ||||||    
T  7747347 gttcacctttagtgggtcggaaaccggtgcgaaagccaaaaaaaaaaaa 7747395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 38962745 - 38962849
Alignment:
Q  26 caaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctt 125  Q
    ||||||||||| || | |||| || |||| ||| |||||||||||||||||||| ||||||||||  ||||| ||| || |||||||||||||||| |||    
T  38962745 caaggacgtatccggggaataccgggttcgattttcaggaggaacaacgcttggccagtgcgcatgcctctacgcatgaaccggattagtcgtccacctt 38962844  T
Q  126 tggtg 130  Q
    |||||    
T  38962845 tggtg 38962849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 8410104 - 8410242
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  ||   ||||||| |||| |||| |||| |||||||| ||||| ||||||||||  ||||| ||||||||||||||||||    
T  8410104 agctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtc 8410203  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    | |||  ||||| | |  |||||||||||||||| ||||    
T  8410204 gcccacttttggggggtcggaaaccggtgcgaaagccaa 8410242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 10026749 - 10026636
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  ||  ||||| || |||| ||||||||| ||||||||| |||| ||||||||||  ||||| ||| ||||||||||||||    
T  10026749 agctccttccaaggacgtactcggaaaataccgggttcgattctcagggggaacaacgtttggccagtgcgcatgcctctacgcatgagccggattagtc 10026650  T
Q  117 gtccatctttggtg 130  Q
    | ||| ||||||||    
T  10026649 gaccacctttggtg 10026636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 18902663 - 18902530
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | |||| || |||| |||| || | |||||||||||||  |||||||| | |||||| ||||||||| ||||||||    
T  18902663 agctccttccaaggacgtactcggggaataccgggttcgattcccacggggaacaacgcttgaccagtgcgcgtgtctctacgcacgagccagattagtc 18902564  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    | ||| |||||||| |  ||||||||||||||||    
T  18902563 gcccacctttggtgggtcggaaaccggtgcgaaa 18902530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 155
Target Start/End: Complemental strand, 20612669 - 20612529
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggagg-aacaacgcttggtcagtgcgcatatctctatgcacgagccgg-attag 114  Q
    ||||||| ||||||  |||| || | |||| || |||| |||||||||||| |||||| ||||| ||||||||||  ||||||||| ||||||| |||||    
T  20612669 agctccttccaaggttgtattcggggaataccgggttcgattctcaggagggaacaacacttggccagtgcgcatgcctctatgcatgagccgggattag 20612570  T
Q  115 tcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    ||||||| | |||||| |  |||||||||||||||| ||||    
T  20612569 tcgtccaccattggtgggtcggaaaccggtgcgaaaaccaa 20612529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 34722687 - 34722763
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttg 127  Q
    |||| |||||||||  |||||||||||||||||||| ||| |||||| ||||||||||||||||||| ||| |||||    
T  34722687 gttcgattctcagggagaacaacgcttggtcagtgcacatgtctctacgcacgagccggattagtcgcccacctttg 34722763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 163
Target Start/End: Original strand, 44945613 - 44945712
Alignment:
Q  64 gaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaacccaagaataaa 162  Q
    ||||||||||||||||  |||||||||  ||||| ||||||||||||||||||| ||| |||| ||| ||| |||||||||||||||| ||||||| |||    
T  44945613 gaggaacaacgcttggatagtgcgcatgcctctacgcacgagccggattagtcgcccacctttagtg-gatcggaaaccggtgcgaaagccaagaaaaaa 44945711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 27725939 - 27726046
Alignment:
Q  43 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccg 142  Q
    |||||||||||  ||||||||||||||||| |||||| ||||||||||  ||||| |||| |||||||||||||| ||| |  ||||| |  ||||||||    
T  27725939 aatatcgagtttgattctcaggaggaacaatgcttggccagtgcgcatgcctctacgcactagccggattagtcgcccaccaatggtgggtcggaaaccg 27726038  T
Q  143 gtgcgaaa 150  Q
    ||| ||||    
T  27726039 gtgtgaaa 27726046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 150
Target Start/End: Complemental strand, 28616510 - 28616379
Alignment:
Q  19 ctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgt 118  Q
    ||||| |||||||| ||| || | ||||||| |||| ||| ||||| |||| ||| ||||| ||||||||||  ||||| ||||||||| |||||||||     
T  28616510 ctccttccaaggacatatccgcggaatatcgggttcgattttcagggggaataacacttgggcagtgcgcatgcctctacgcacgagccagattagtcgc 28616411  T
Q  119 ccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||||||| ||| |   |||||||||||||||    
T  28616410 ccatctttagtgggtcagaaaccggtgcgaaa 28616379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 150
Target Start/End: Complemental strand, 3643973 - 3643887
Alignment:
Q  64 gaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||||||||||||||| ||||||||||  ||||| ||| |||| |||||||||||||| |||||||| |  |||||||| |||||||    
T  3643973 gaggaacaacgcttggccagtgcgcatgcctctacgcatgagctggattagtcgtccacctttggtgggccggaaaccgttgcgaaa 3643887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 165
Target Start/End: Original strand, 10669615 - 10669713
Alignment:
Q  67 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    ||||||||||||| |||||||||| |||||| ||||||| ||||||| |||| || |||||||| |  |||||||||||| ||| |||| || ||||||    
T  10669615 gaacaacgcttggccagtgcgcatgtctctacgcacgagtcggattaatcgttcacctttggtgggtcggaaaccggtgctaaatccaaaaaaaaaaaa 10669713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 22593108 - 22593244
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | ||||  |||||| |||| |||| ||||||||| |||| ||||||||||  ||||| ||| ||||||||||||||    
T  22593108 agctccttccaaggacgtacccggggaatactgagttcgattcccagggggaacaacg-ttggccagtgcgcatgcctctacgcatgagccggattagtc 22593206  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    ||||| |||||||| | | | ||||||||||||| ||||    
T  22593207 gtccacctttggtg-ggtcggaaccggtgcgaaagccaa 22593244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 165
Target Start/End: Original strand, 24179576 - 24179689
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||| ||||||||| ||||||||| |||| |||||| |||  ||||| ||| |||||||||||||||||||||||||||| | |  |||||||||| |||    
T  24179576 gttcgattctcagg-ggaacaacgtttggccagtgcacatgcctctacgcatgagccggattagtcgtccatctttggtgggttaaaaaccggtgcaaaa 24179674  T
Q  151 cccaagaataaaaaa 165  Q
     |||| || ||||||    
T  24179675 gccaaaaaaaaaaaa 24179689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 127
Target Start/End: Original strand, 37560146 - 37560256
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | |||| |  |||| ||||||| | ||||||||| |||||||||||||||  ||||| ||||||||||||||| ||    
T  37560146 agctccttccaaggacgtacccgaggaataccaggttcgattctcaaggggaacaacgtttggtcagtgcgcatgcctctacgcacgagccggattaatc 37560245  T
Q  117 gtccatctttg 127  Q
    ||||| |||||    
T  37560246 gtccacctttg 37560256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 146
Target Start/End: Original strand, 21286417 - 21286546
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| || | |||| || |||| |||| |||| | |||||||||||  ||||||||||  ||||| |||||||| |||||||||    
T  21286417 agctccttccaaggacgtatccggggaataccgggttcgattcccaggcgaaacaacgcttgaccagtgcgcatgcctctacgcacgagctggattagtc 21286516  T
Q  117 gtccatctttggtgtgatggaaaccggtgc 146  Q
       |||| |||||| | |||||||||||||    
T  21286517 actcatcattggtgggttggaaaccggtgc 21286546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 150
Target Start/End: Complemental strand, 16813249 - 16813165
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||||||| |||  |||| |||||  |||||||||||||||||||||||||||||||||||||  | |||||| | ||||||||    
T  16813249 ggaacaacgtttgaccagtacgcatgcctctatgcacgagccggattagtcgtccatctttggtaggttggaaatcagtgcgaaa 16813165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 150
Target Start/End: Complemental strand, 16852528 - 16852444
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||||||| |||  |||| |||||  |||||||||||||||||||||||||||||||||||||  | |||||| | ||||||||    
T  16852528 ggaacaacgtttgaccagtacgcatgcctctatgcacgagccggattagtcgtccatctttggtaggttggaaatcagtgcgaaa 16852444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 145
Target Start/End: Complemental strand, 39201641 - 39201513
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | |||| ||| ||| ||||||||| ||||||| | |||| ||||| ||||  ||||| ||| ||||||||||||||    
T  39201641 agctccttccaaggacgtactcgaggaataccgaattcgattctcagggggaacaatgtttggccagtgtgcatgcctctacgcatgagccggattagtc 39201542  T
Q  117 gtccatctttggtgtgatggaaaccggtg 145  Q
    || || |||||||| |  |||||||||||    
T  39201541 gttcacctttggtgggtcggaaaccggtg 39201513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 150
Target Start/End: Original strand, 35946722 - 35946844
Alignment:
Q  27 aaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatcttt 126  Q
    |||||||||| || | |||| ||||||| ||||  ||| |||||||||||||| || || ||||  ||||| ||||||||||||||||||||||| | ||    
T  35946722 aaggacgtatccggggaataccgagttcgattcctagg-ggaacaacgcttggccattgtgcatgcctctacgcacgagccggattagtcgtccaccatt 35946820  T
Q  127 ggtgtgatggaaaccggtgcgaaa 150  Q
    |||| |  |||||| |||||||||    
T  35946821 ggtgggtcggaaactggtgcgaaa 35946844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 150
Target Start/End: Original strand, 44139491 - 44139590
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||| |||| |||| |||||||||||||| |||||||| |  ||||| ||||||||||||||||||| ||| |  ||||| |  ||||||||||||||||    
T  44139491 gttcgattcccagggggaacaacgcttggccagtgcgcgtgcctctacgcacgagccggattagtcgcccaccaatggtgggtcggaaaccggtgcgaaa 44139590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 165
Target Start/End: Complemental strand, 3811822 - 3811676
Alignment:
Q  19 ctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgt 118  Q
    ||||| |||||||||||  || | ||||||| |||| |||| |||  |||||||| |||||||| |||||||  ||||| ||| ||||||||||| |||     
T  3811822 ctccttccaaggacgtactcgaggaatatcgggttcgattcccagagggaacaacacttggtcaatgcgcatgcctctacgcatgagccggattactcgc 3811723  T
Q  119 ccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    ||| |||||||| |   ||||||| ||||||| |||| || ||||||    
T  3811722 ccacctttggtgggtcagaaaccgatgcgaaagccaaaaaaaaaaaa 3811676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 165
Target Start/End: Original strand, 12455334 - 12455431
Alignment:
Q  68 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    |||||||||| | ||||||||||  ||||| |||||||||||||||||||  || | |||||| |  |||||||||||||||| |||| || ||||||    
T  12455334 aacaacgcttagccagtgcgcatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccggtgcgaaagccaaaaaaaaaaaa 12455431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 12864241 - 12864330
Alignment:
Q  61 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||| |||||||| ||||||||||||||||  ||||  ||| ||||| ||||||||||||| | |||||| |  ||||||||||||||||    
T  12864241 cagggggaacaacacttggtcagtgcgcatgcctctgcgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 12864330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 13026542 - 13026445
Alignment:
Q  19 ctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||| |||||||||||| |  | ||||||| |||| ||| ||||||||||||| | |||| ||||||||||  ||||| ||| ||||||||||||||    
T  13026542 ctccttccaaggacgtatccagggaatatcgggttcgattatcaggaggaacaatgattggccagtgcgcatgcctctacgcatgagccggattagtc 13026445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 20116700 - 20116607
Alignment:
Q  62 aggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    |||||||||||||| ||| || |||||||  ||||| ||| |||||||||||| |||||| ||||| || |  |||||||||||||||| ||||    
T  20116700 aggaggaacaacgcatggccaatgcgcatgcctctacgcatgagccggattagccgtccacctttgatgggtcggaaaccggtgcgaaagccaa 20116607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 38005375 - 38005523
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | ||||  | |||| |||| || | |||||||||||||| ||||||||||  |||||  || ||||||||||||||    
T  38005375 agctccttccaaggacgtacccggggaatactgggttcgattcccaaggggaacaacgcttggccagtgcgcatgcctctacacatgagccggattagtc 38005474  T
Q  117 gtccatctttggtgtgat-ggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    | ||| |||||||| ||| |||||| ||||||||| |||| || ||||||    
T  38005475 gcccacctttggtg-gatcggaaactggtgcgaaagccaaaaaaaaaaaa 38005523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 331482 - 331598
Alignment:
Q  25 ccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatct 124  Q
    |||||||||||  || | |||| || |||| |||| |||| |||||||| ||||| ||||||||||   |||| ||| ||||||||||||||| ||| ||    
T  331482 ccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcttctacgcatgagccggattagtcgcccacct 331581  T
Q  125 ttggtgtgatggaaacc 141  Q
    |||||| | ||||||||    
T  331582 ttggtgggttggaaacc 331598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 2528474 - 2528326
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | || | || |||| |||| |||| |||||||||||||||||||| ||||  |||||  ||  |||||||||||||    
T  2528474 agctccttccaaggacgtactcgaggaacaccgggttcgattcccagggggaacaacgcttggtcagtgtgcatgcctctacacataagccggattagtc 2528375  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    |  ||||||| ||| |  |||||| ||||||||| |||| || ||||||    
T  2528374 gctcatctttagtgagtcggaaactggtgcgaaagccaaaaaaaaaaaa 2528326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 150
Target Start/End: Original strand, 11069900 - 11069984
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||||||| |||| ||||||||||| ||||| |||||||| | |||||||||||| | |||||| |  |||||||| |||||||    
T  11069900 ggaacaacgtttggccagtgcgcatacctctacgcacgagctgaattagtcgtccaccgttggtgggtcggaaaccgatgcgaaa 11069984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 45263751 - 45263687
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 130  Q
    |||||||||||||| ||||||||||  ||||| ||||||||||||||| |||  |||||||||||    
T  45263751 ggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattaatcgctcatctttggtg 45263687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 150
Target Start/End: Original strand, 16325602 - 16325701
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||| |||| |||| |||||||| ||||| ||||| ||||  ||||| ||| ||||| ||||||||||||| | |||||| |  ||||||||||||||||    
T  16325602 gttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 16325701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 150
Target Start/End: Complemental strand, 41032005 - 41031906
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||| |||| |||| |||||||| ||||| ||||| ||||  ||||| ||||||||||||||||||  ||| |||||||| |  ||||||| ||||||||    
T  41032005 gttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcacccacctttggtgggtcggaaaccagtgcgaaa 41031906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 9360830 - 9360748
Alignment:
Q  68 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||||| |||| ||||||||||  ||||| |||||||||| |||||||| ||| |||| ||| |  ||||||||||||||||    
T  9360830 aacaacgtttggccagtgcgcatgcctctacgcacgagccgaattagtcgcccacctttagtgggccggaaaccggtgcgaaa 9360748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 155
Target Start/End: Original strand, 29653651 - 29653733
Alignment:
Q  68 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    |||||||||||| ||||||||||  ||||| |||||||||| |||||||| ||| ||||||||    |||||||||||||||| ||||    
T  29653651 aacaacgcttgggcagtgcgcatgcctctacgcacgagccgaattagtcg-ccacctttggtg----ggaaaccggtgcgaaagccaa 29653733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 2784906 - 2785038
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    |||||||  ||||||||||| || | |||| ||||||| ||| ||||| | |||||   |||||||||||||||  ||||| ||| ||| | ||||||||    
T  2784906 agctcctttcaaggacgtatccgaggaataccgagttcgattttcagg-gaaacaagatttggtcagtgcgcatgcctctacgcatgagtcagattagtc 2785004  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||||| ||| || |  ||||||||||||||||    
T  2785005 gtccatcattgatgagtcggaaaccggtgcgaaa 2785038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 6358240 - 6358171
Alignment:
Q  61 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 130  Q
    |||| |||||||| ||||| ||||||||||  ||||| ||| ||||||||||||||||||| | ||||||    
T  6358240 cagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtg 6358171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 7787073 - 7787142
Alignment:
Q  61 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 130  Q
    |||| |||||||  ||||| |||| |||||  ||||| ||||||||||||||||||| ||||||||||||    
T  7787073 cagggggaacaatacttggccagtacgcatgcctctacgcacgagccggattagtcgcccatctttggtg 7787142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 118
Target Start/End: Original strand, 34356223 - 34356280
Alignment:
Q  61 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgt 118  Q
    |||| |||||||| ||||||||||||||||  ||||||||| ||||||||||| ||||    
T  34356223 cagggggaacaacacttggtcagtgcgcatgcctctatgcatgagccggattaatcgt 34356280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 41187822 - 41187922
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| || | |||| ||| ||| ||||| ||||  |||||||||||  ||||||||||  ||||| ||| ||| ||||||||||    
T  41187822 agctccttccaaggacgtatccgaggaataccgaattcaattcttaggaaaaacaacgcttgaccagtgcgcatgcctctacgcatgagacggattagtc 41187921  T
Q  117 g 117  Q
    |    
T  41187922 g 41187922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 44023361 - 44023401
Alignment:
Q  110 attagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  44023361 attagtcgtccatctttggtgggttggaaaccggtgcgaaa 44023401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 150
Target Start/End: Original strand, 16034912 - 16035043
Alignment:
Q  19 ctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgt 118  Q
    ||||| |||||||||||| || | |||| || |||| ||| ||||| |||||||||||||  ||||| ||||  || || | |||||||||||||||||     
T  16034912 ctccttccaaggacgtatccgaggaataccgggttcgattttcaggcggaacaacgcttgaccagtgtgcatgcctatacgtacgagccggattagtcgc 16035011  T
Q  119 ccatctttggtgtgatggaaaccggtgcgaaa 150  Q
     || | ||| || |  ||||||||||||||||    
T  16035012 tcaccattgatgagtcggaaaccggtgcgaaa 16035043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 18649120 - 18649026
Alignment:
Q  56 attctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||||||||||||||||   |||| ||||||||||  ||||| ||| ||| |||||||||||  ||  ||||||| | ||||||||| |||||||    
T  18649120 attctcaggaggaacaatatttgggcagtgcgcatgcctctacgcatgagtcggattagtcgctcacttttggtgggttggaaaccgttgcgaaa 18649026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 19976932 - 19976830
Alignment:
Q  25 ccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatct 124  Q
    |||||||||||| || | |||| || |||| ||| ||||| |||| |||| ||||||||||||||| |||||| |||  || || |||||||| ||| ||    
T  19976932 ccaaggacgtatccggggaataccgggttcgattttcagggggaataacgtttggtcagtgcgcatgtctctacgcataagtcgaattagtcgcccacct 19976833  T
Q  125 ttg 127  Q
    |||    
T  19976832 ttg 19976830  T

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Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 127
Target Start/End: Original strand, 25549777 - 25549811
Alignment:
Q  93 ctctatgcacgagccggattagtcgtccatctttg 127  Q
    ||||| |||||||||||||||||||||||||||||    
T  25549777 ctctacgcacgagccggattagtcgtccatctttg 25549811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 126
Target Start/End: Complemental strand, 28525537 - 28525479
Alignment:
Q  68 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatcttt 126  Q
    |||||| ||||| ||||||||||  ||||| |||||||||||||||||| |||| ||||    
T  28525537 aacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcatccaccttt 28525479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 29422237 - 29422298
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttg 127  Q
    |||||||| ||||| || || ||||| || || ||||||||||||||||||||||| |||||    
T  29422237 ggaacaacacttggccaatgagcatacctttacgcacgagccggattagtcgtccacctttg 29422298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 31596565 - 31596432
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||| ||||||| |||  ||||||  |||||||| ||||| ||||||| | |||| |||||| ||||  |||| ||| |||| | |||| ||    
T  31596565 agctccttccaaagacgtatccgtagaatatcaggttctattttcagggggaacaatgtttggccagtgcacatacttctacgcatgagctgaattaatc 31596466  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||| | ||||| ||   |||||||||||||||||    
T  31596465 gtctacctttgatgaattggaaaccggtgcgaaa 31596432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 3849013 - 3848937
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttg 127  Q
    |||| ||| ||||| | ||||||| |||| ||| |||||| |||||| ||||||| |||||||||||| || |||||    
T  3849013 gttcgattatcaggggaaacaacgtttggccagggcgcatgtctctacgcacgagtcggattagtcgttcacctttg 3848937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 10106574 - 10106670
Alignment:
Q  30 gacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatcttt 126  Q
    ||||||| || |||||| ||  ||| |||||||| |||||||||||||| | || ||||||   ||||||||  || ||||||||||||||| ||||    
T  10106574 gacgtatccgagaaataccggattcgattctcagaaggaacaacgcttgattagcgcgcatgcttctatgcataagtcggattagtcgtccaccttt 10106670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 123
Target Start/End: Complemental strand, 43303399 - 43303319
Alignment:
Q  43 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatc 123  Q
    ||||||| |||| ||| ||| | |||||||||||||  |||| |||||  |||||||||||||| |||||| ||| |||||    
T  43303399 aatatcgggttcgattttcaaggggaacaacgcttgaccagtacgcatgcctctatgcacgagctggattaatcgcccatc 43303319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 127
Target Start/End: Original strand, 1797436 - 1797546
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| || | |||| || |||| |||| |||| | |||||||||||| |||||||||| |||||| |||||||||||| |||||    
T  1797436 agctccttccaaggacgtatccgaggaataccgggttcgattcccaggggaaacaacgcttggccagtgcgcatgtctctacgcacgagccggactagtc 1797535  T
Q  117 gtccatctttg 127  Q
    |||||||||||    
T  1797536 gtccatctttg 1797546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 150
Target Start/End: Complemental strand, 38578992 - 38578867
Alignment:
Q  25 ccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatct 124  Q
    |||||||||||  || | ||||||| |||| |||| |||| |||||||||||||| ||||||||||  ||||| ||| ||||||||||||||| ||| ||    
T  38578992 ccaaggacgtacccggggaatatcgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacct 38578893  T
Q  125 ttggtgtgatggaaaccggtgcgaaa 150  Q
    |||||| |  ||||||||||||||||    
T  38578892 ttggtgggtcggaaaccggtgcgaaa 38578867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 17748516 - 17748377
Alignment:
Q  16 cagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagt 115  Q
    ||||| || |||||||||||| || | |||| || |||| |||| |||| |||||||||||||| ||||||||||  ||||| | |||||||||||||||    
T  17748516 cagcttcttccaaggacgtattcggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgtacgagccggattagt 17748417  T
Q  116 cgtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    |||||| ||||| || |  |||||||| ||||||| ||||    
T  17748416 cgtccacctttgttgggtcggaaaccgatgcgaaagccaa 17748377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 48804659 - 48804792
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| || | |||| || |||| |||| || | |||||||| ||||| ||||||||||  ||||| ||| ||||||||||||||    
T  48804659 agctccttccaaggacgtatccggggaataccgggttcgattcccaaggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 48804758  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||| | |||||| |  ||||||||||||||||    
T  48804759 gtccaccattggtgggtcggaaaccggtgcgaaa 48804792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 22993500 - 22993352
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | ||||||| |||| ||||  |||||||||||||||||| ||||| ||||  ||||| |||||| |||||||||||    
T  22993500 agctccttccaaggacgtacccggggaatatcgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtc 22993401  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    |  || |||||||| |   ||||||||||||||| |||| || ||||||    
T  22993400 gctcacctttggtgggtcagaaaccggtgcgaaagccaaaaaaaaaaaa 22993352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 4195335 - 4195202
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| || | |||| ||||||| |||  |||||||||||||  ||||  |||||||||  ||||| ||| |||||||||||| |    
T  4195335 agctcctgccaaggacgtatccggggaataccgagttcgatttccaggaggaacaacatttggctagtgcgcatgcctctacgcatgagccggattagcc 4195236  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||| | |||||| | ||||||||| |||||||    
T  4195235 gtccaccattggtgggttggaaaccgatgcgaaa 4195202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 10048009 - 10047861
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| || | |||| || |||| |||| |||| |||||||| ||||| |||||||||   ||||| ||| |||| | |||||||    
T  10048009 agctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcaggcctctacgcatgagcagaattagtc 10047910  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    ||||| | |||||| |  |||||||||||||||| |||| || ||||||    
T  10047909 gtccaccattggtgggtcggaaaccggtgcgaaagccaaaaaaaaaaaa 10047861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 13095834 - 13095982
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    |||||||  ||||||||||  || | |||| || ||||||||| |||| |||||||| ||||| ||||||||||  ||||| ||| ||||||||||||||    
T  13095834 agctcctttcaaggacgtacccggggaataccgggttctattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 13095933  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    |  || |||||||| |  |||||||||||| ||| |||| || ||||||    
T  13095934 gctcacctttggtgggtcggaaaccggtgcaaaagccaaaaaaaaaaaa 13095982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 39474965 - 39475025
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatcttt 126  Q
    |||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||| ||||    
T  39474965 ggaacaacgcttggtcagtgcgcatacctctacgcatgagccggattagtcgtccaccttt 39475025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 150
Target Start/End: Original strand, 41945498 - 41945582
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||| ||||||||| ||||||||||  ||||| ||||||||||||||||||||||| |||||||| |  ||||| ||||||||||    
T  41945498 ggaataacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgagtcggaaatcggtgcgaaa 41945582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 23658181 - 23658268
Alignment:
Q  43 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 130  Q
    |||||| ||||| |||  |||| |||||||||||||| ||||| ||||  |||||  |||||||||||||||||||||||||||||||    
T  23658181 aatatccagttcgatttccagggggaacaacgcttggccagtgtgcatgcctctacacacgagccggattagtcgtccatctttggtg 23658268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 150
Target Start/End: Original strand, 34659236 - 34659335
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||| ||||||| | |||||||||||||  ||||||||||  ||||| ||||||||||||||||||| ||| | ||||||||  | ||||||||||||||    
T  34659236 gttcgattctcaaggggaacaacgcttgaccagtgcgcatgcctctacgcacgagccggattagtcgcccaccattggtgtgtcgaaaaccggtgcgaaa 34659335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 22973943 - 22974081
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | |||| || |||| ||||||||| |||||||||||||| ||||| ||||   |||| ||| ||||| ||||||||    
T  22973943 agctccttccaaggacgtactcggggaataccgggttcgattctcagggggaacaacgcttggccagtgtgcatgcgtctacgcatgagccagattagtc 22974042  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    ||||| |||||||| |   |||||||| |||||| ||||    
T  22974043 gtccacctttggtgggtcagaaaccggcgcgaaagccaa 22974081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 5039525 - 5039438
Alignment:
Q  43 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 130  Q
    |||| ||||||| ||||  |||||||||||| |||||||||||| |||| ||||| ||| |||||||||||||||  || ||||||||    
T  5039525 aataccgagttcgattcctaggaggaacaacacttggtcagtgcacatacctctacgcatgagccggattagtcgctcacctttggtg 5039438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 144
Target Start/End: Complemental strand, 28396284 - 28396166
Alignment:
Q  26 caaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctt 125  Q
    |||| |||||| || ||||||||| |||| ||||||||| |||||||||||| |   ||||||||  || || ||| ||||||||||||||||| | |||    
T  28396284 caagaacgtatccgggaaatatcgggttcaattctcagggggaacaacgcttagctggtgcgcatgcctttacgcatgagccggattagtcgtctacctt 28396185  T
Q  126 tggtgtgatggaaaccggt 144  Q
    ||||| |  ||||||||||    
T  28396184 tggtgggtcggaaaccggt 28396166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 164
Target Start/End: Original strand, 28744187 - 28744285
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaa 164  Q
    ||||||| |||||| |||| |||||| |||||   ||||||||||||||||||||| |||||||| |  |||||| ||||||||| |||| || |||||    
T  28744187 ggaacaatgcttggccagtacgcatacctctacatacgagccggattagtcgtccacctttggtgggtcggaaactggtgcgaaagccaaaaaaaaaaa 28744285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 43346912 - 43346779
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||| |||||||  | | |||| || |||| ||||||| | |||||||| ||||| | ||||||||  ||||| | ||||||||||||||||    
T  43346912 agctccttccaaagacgtatctggggaataccgggttcaattctcaaggggaacaacacttggccggtgcgcatgcctctacgtacgagccggattagtc 43346813  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |  ||||||||||| |  ||||||| ||||||||    
T  43346812 gctcatctttggtgggtcggaaaccagtgcgaaa 43346779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 150
Target Start/End: Original strand, 47341860 - 47341985
Alignment:
Q  25 ccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatct 124  Q
    |||||||||||  || | |||| ||||||| |||| |||| |||||||| ||||| ||||||||||  ||||| |||||||| ||||| ||||| || |     
T  47341860 ccaaggacgtacccggggaataccgagttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagcaggattggtcgttcacca 47341959  T
Q  125 ttggtgtgatggaaaccggtgcgaaa 150  Q
    |||||| |  ||||| ||||||||||    
T  47341960 ttggtgggtcggaaatcggtgcgaaa 47341985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 155
Target Start/End: Complemental strand, 5069938 - 5069810
Alignment:
Q  27 aaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatcttt 126  Q
    |||||||||  || |||||| || |||| |||  ||||||||||||||||| |  |||| ||||  ||||| |||| |||||||||||||| ||| ||||    
T  5069938 aaggacgtacccgggaaataccgggttcgatttccaggaggaacaacgcttagctagtgtgcatgcctctacgcacaagccggattagtcgcccaccttt 5069839  T
Q  127 ggtgtgatggaaaccggtgcgaaacccaa 155  Q
    |||| |  |||||||| ||||||| ||||    
T  5069838 ggtgggtcggaaaccgatgcgaaagccaa 5069810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 150
Target Start/End: Complemental strand, 8734770 - 8734686
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||||| |||||| ||||||||||  ||| | ||||||||| ||||||||| ||| |||||||| |  ||||||||||||||||    
T  8734770 ggaacaatgcttgggcagtgcgcatgcctcaacgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 8734686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 16802099 - 16802199
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | |||| ||  ||| ||||| ||||||||||||| |||| ||||||| ||  ||||| ||||||||||||||||||    
T  16802099 agctccttccaaggacgtacccggggaataccggattcgattcttaggaggaacaacgattggccagtgcgtatgcctctacgcacgagccggattagtc 16802198  T
Q  117 g 117  Q
    |    
T  16802199 g 16802199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 37514946 - 37514998
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgt 118  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||||||| ||||    
T  37514946 ggaacaacgtttggtcagtgcgcatgtctctacgcacgagccggattaatcgt 37514998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 166
Target Start/End: Original strand, 39420862 - 39420962
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    |||||||||||||| |||||||| |  ||||| ||| ||||||||||||||||| | ||||| || |  |||||||||||| ||| |||| || ||||||    
T  39420862 ggaacaacgcttggccagtgcgcgtgcctctacgcatgagccggattagtcgtctacctttgatgggccggaaaccggtgcaaaagccaaaaaaaaaaaa 39420961  T
Q  166 c 166  Q
    |    
T  39420962 c 39420962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 1605961 - 1606055
Alignment:
Q  61 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaacccaa 155  Q
    |||| |||||||||||||| |||||| |||  ||||| ||  ||||||||||||||| ||| |||||||| ||| |||||||||||||||| ||||    
T  1605961 cagggggaacaacgcttggccagtgcacatgcctctaggcttgagccggattagtcgcccacctttggtg-gatcggaaaccggtgcgaaagccaa 1606055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 43925488 - 43925586
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagt 115  Q
    ||||||| |||||||||||  || | |||| || |||| |||| |||| |||||||| ||||||||||||||||  ||||| ||| |||| ||||||||    
T  43925488 agctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgcatgagctggattagt 43925586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 21190913 - 21190780
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||| ||| || | |||| || |||| ||||  ||||||| ||||||||||  |||||||||  ||||| ||||||| | ||||||||    
T  21190913 agctccttccaaggacttatccggggaataccgggttcgattcctaggaggagcaacgcttggctagtgcgcatgcctctacgcacgagtcagattagtc 21190814  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    | |||||  ||||| |  | ||||||||||||||    
T  21190813 gcccatcaatggtgggtcgaaaaccggtgcgaaa 21190780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 165
Target Start/End: Original strand, 21530763 - 21530872
Alignment:
Q  56 attctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    |||| |||| |||||||| |||||||||||| |||  ||||| |||||||||| |||| |||  || |||||||| |  |||||||||| ||||| ||||    
T  21530763 attcccagggggaacaacacttggtcagtgcacatgcctctacgcacgagccgaattaatcgctcacctttggtgggtcggaaaccggttcgaaagccaa 21530862  T
Q  156 gaataaaaaa 165  Q
     || ||||||    
T  21530863 aaaaaaaaaa 21530872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 155
Target Start/End: Complemental strand, 43862071 - 43861967
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaa 149  Q
    |||| |||| |||| ||||||||| |||| ||||||||||  ||||| ||| |||||||||||||| | || |||||||| ||| | |||||||||||||    
T  43862071 gttcgattcccagggggaacaacgtttggccagtgcgcatgcctctacgcatgagccggattagtcattcacctttggtg-gatcgaaaaccggtgcgaa 43861973  T
Q  150 acccaa 155  Q
    | ||||    
T  43861972 agccaa 43861967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 3353427 - 3353510
Alignment:
Q  43 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttg 127  Q
    ||||||| | || ||||||||| | ||||||  |||| ||||||||||  ||||| ||||||||||||||||||||||| |||||    
T  3353427 aatatcgggatcgattctcagg-gaaacaacatttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttg 3353510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 18785645 - 18785777
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | |||| || |||| ||||  ||| |||||||| ||||| ||||||||||  ||||| ||| || | |||||||||    
T  18785645 agctccttccaaggacgtacccggggaataccgggttcgattcctagggggaacaacacttggccagtgcgcatgcctctacgcatgaactggattagtc 18785744  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaa 149  Q
    || || || ||||| |  |||||||||||||||    
T  18785745 gttcacctctggtgggtcggaaaccggtgcgaa 18785777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 150
Target Start/End: Complemental strand, 26423386 - 26423288
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||| |||| |||| | |||||||||||| |||||| | |  ||||| ||||||||| |||||||||| || |||||||| |  ||||||||||||||||    
T  26423386 gttcgattcccaggggaaacaacgcttggccagtgcacctgcctctacgcacgagccagattagtcgttcacctttggtg-gtcggaaaccggtgcgaaa 26423288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 365116 - 365214
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagt 115  Q
    ||||||| ||||  |||||| || | |||| || |||| |||| |||||||||||||||||  |||||||||||  ||||| ||| ||||| |||||||    
T  365116 agctccttccaaaaacgtatccgaggaataccgggttcgattcacaggaggaacaacgcttaatcagtgcgcatgcctctacgcatgagcctgattagt 365214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 14650293 - 14650431
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  ||   ||||||| |||| |||  |||||||||||| |||||  ||||||  ||  ||||| ||| ||||||| ||||||    
T  14650293 agctccttccaaggacgtacccggagaatatcgggttcgatttccaggaggaacaatgcttgaccagtgcatatgcctctacgcatgagccgggttagtc 14650392  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    |  || |||||||| | || |||||||||||||| ||||    
T  14650393 gctcacctttggtgggttgaaaaccggtgcgaaagccaa 14650431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 164
Target Start/End: Original strand, 48551883 - 48551980
Alignment:
Q  67 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaacccaagaataaaaa 164  Q
    |||||||| |||| || |||||||  ||||| | | ||||||||||||||||||| ||||| || ||| |||||||||||||||| |||| || |||||    
T  48551883 gaacaacggttggccaatgcgcatgcctctacgtatgagccggattagtcgtccacctttgatg-gatcggaaaccggtgcgaaagccaaaaacaaaaa 48551980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 27028299 - 27028388
Alignment:
Q  61 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||| |||||||| ||||| ||||||||||  |||||  || |||| ||||||||||  || |||||||| |  ||||||||||||||||    
T  27028299 cagggggaacaacacttggccagtgcgcatgcctctacacatgagctggattagtcgctcacctttggtgggtcggaaaccggtgcgaaa 27028388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 3603394 - 3603466
Alignment:
Q  78 ggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||||||||||||  ||||| ||||||||||||||| |||| ||  ||||||| |  ||||| ||||||||||    
T  3603394 ggtcagtgcgcatgcctctacgcacgagccggattaatcgttcacttttggtgggtcggaaatcggtgcgaaa 3603466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 9685715 - 9685771
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaac 73  Q
    ||||||| ||||| |||||| || | ||||||| |||| ||||||||||||||||||    
T  9685715 agctccttccaagcacgtatccggggaatatcgggttcgattctcaggaggaacaac 9685771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 165
Target Start/End: Complemental strand, 24983487 - 24983403
Alignment:
Q  82 agtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtg-atggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    |||||||||  ||||| ||| ||||||||||||||||||| | |||||| |  ||||||||| ||||||| |||| || ||||||    
T  24983487 agtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtctggaaaccgatgcgaaagccaaaaaaaaaaaa 24983403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 150
Target Start/End: Complemental strand, 29805524 - 29805440
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||||||| ||||||||||||||| |||||| ||| |||||  |||| ||||| | |||| ||| |  ||||||| ||||||||    
T  29805524 ggaacaacgtttggtcagtgcgcatgtctctacgcatgagccaaattaatcgtctacctttagtgagtcggaaaccagtgcgaaa 29805440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 30827318 - 30827370
Alignment:
Q  67 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtc 119  Q
    ||||||| ||||| |||| |||||  ||||| |||||||||||||||||||||    
T  30827318 gaacaacacttggccagtacgcatgcctctacgcacgagccggattagtcgtc 30827370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 36619378 - 36619274
Alignment:
Q  26 caaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctt 125  Q
    |||||||||||  | | |||| || |||| |||| |||| |||||||| ||||  ||||| ||||  ||||| ||| ||||||||||||||||||| | |    
T  36619378 caaggacgtatttggggaataccgggttcgattcccagggggaacaacacttgtccagtgtgcatgcctctacgcatgagccggattagtcgtccaccat 36619279  T
Q  126 tggtg 130  Q
    |||||    
T  36619278 tggtg 36619274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 42086301 - 42086439
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | |||| || |||| |||| |||| |||||||||||||  ||||||||||  ||||| ||| ||||||||||||||    
T  42086301 agctccttccaaggacgtacccgaggaataccgggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattagtc 42086400  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    ||||| |||||||| |  |||||||||||||||| ||||    
T  42086401 gtccacctttggtgggtcggaaaccggtgcgaaagccaa 42086439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 5732053 - 5731905
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | |||| || |||| |||| ||||||||||||||||||| ||||||||||  ||||| | | ||||| ||||||||    
T  5732053 agctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgtatgagccagattagtc 5731954  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    || || |||| ||| |  |||||||||||||||| |||| || ||||||    
T  5731953 gttcacctttagtgggtcggaaaccggtgcgaaagccaaaaaaaaaaaa 5731905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 155
Target Start/End: Original strand, 9805012 - 9805116
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||| |||| |||| |||||||||||||| ||||||||||  ||||| ||| ||||||||||||||||||| |||||||| |  |||||| |||||||||    
T  9805012 gttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaacaggtgcgaaa 9805111  T
Q  151 cccaa 155  Q
     ||||    
T  9805112 gccaa 9805116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 150
Target Start/End: Complemental strand, 14588741 - 14588617
Alignment:
Q  26 caaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctt 125  Q
    |||||||||||  | | ||||||| |||| ||| |||||||||| ||||||||  ||||||||||  ||||| ||| ||||||||||||||||||| |||    
T  14588741 caaggacgtatctggggaatatcgggttcgattttcaggaggaataacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccacctt 14588642  T
Q  126 tggtgtgatggaaaccggtgcgaaa 150  Q
    ||||| |  | ||||||||||||||    
T  14588641 tggtgagccgaaaaccggtgcgaaa 14588617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 1538405 - 1538543
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| || ||||||||| || | |||| || |||| |||| |||| |||||||| ||||| ||||||||||  ||||| ||| ||||||||||| ||    
T  1538405 agctccttccgaggacgtattcggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattaatc 1538504  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    ||||| | |||||| |  |||||||||||||||| ||||    
T  1538505 gtccaccattggtgggtcggaaaccggtgcgaaagccaa 1538543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 19572698 - 19572836
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| || | |||| || |||  |||| |||| |||||||| ||||| ||||||||||  ||||| ||| ||||||||||||||    
T  19572698 agctccttccaaggacgtatccggggaataccgggttagattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 19572797  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    || || | |||||| | |||||||| |||||||| ||||    
T  19572798 gttcaccattggtgggttggaaaccagtgcgaaagccaa 19572836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 7866555 - 7866688
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | |||| || |||| ||||  |||||||||||||||||| ||||| ||||  ||||| |||||| |||||||||||    
T  7866555 agctccttccaaggacgtacccgaggaataccgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtc 7866654  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    | ||| |||||||| | | |||||| ||||||||    
T  7866655 gcccacctttggtgggttagaaaccagtgcgaaa 7866688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 20682706 - 20682617
Alignment:
Q  61 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||| |||||||||||||| ||||||||||  ||||| ||||||||||||||| ||| ||| |||| ||| | |||||||||||||||||    
T  20682706 cagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattaatcgaccacctttagtgggttggaaaccggtgcgaaa 20682617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 37263241 - 37263347
Alignment:
Q  43 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgat-ggaaacc 141  Q
    ||||||| |||| ||||||||| |||||||||||||| || |||||||  ||||| ||||||||||||||||||||||| ||||  || ||| |||||||    
T  37263241 aatatcgggttcgattctcagg-ggaacaacgcttggccaatgcgcatgcctctacgcacgagccggattagtcgtccacctttattg-gatcggaaacc 37263338  T
Q  142 ggtgcgaaa 150  Q
    |||||||||    
T  37263339 ggtgcgaaa 37263347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 41800977 - 41801061
Alignment:
Q  43 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttg 127  Q
    ||||||| |||| ||||||| | |||||||||||||  || ||||||| |||||| |||||||||||||||||||| ||||||||    
T  41800977 aatatcgggttcgattctcaaggggaacaacgcttgaccaatgcgcatgtctctacgcacgagccggattagtcgttcatctttg 41801061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 130
Target Start/End: Original strand, 12081916 - 12081995
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 130  Q
    |||| ||||||||| |||||||||||||| ||||||||||   |||| |||||||||| |||||||||||| ||||||||    
T  12081916 gttcgattctcagggggaacaacgcttggccagtgcgcatgcatctacgcacgagccgaattagtcgtccacctttggtg 12081995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 126
Target Start/End: Complemental strand, 9168339 - 9168277
Alignment:
Q  64 gaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatcttt 126  Q
    |||||||||||||||| ||||||||||| ||||| ||| ||||||||||||||||||| ||||    
T  9168339 gaggaacaacgcttggccagtgcgcatacctctacgcatgagccggattagtcgtccaccttt 9168277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 20525812 - 20525945
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    |||||||  |||||| |||| || | ||||||| |||| |||| |||| |||||||| ||| | ||||||||||  ||||| ||| ||||||||||||||    
T  20525812 agctcctttcaaggatgtatccggggaatatcgggttcgattcccaggtggaacaacacttcgccagtgcgcatgcctctacgcatgagccggattagtc 20525911  T
Q  117 gtccatctttggtgtgat-ggaaaccggtgcgaaa 150  Q
    ||||| | |||||| ||| ||||||||||||||||    
T  20525912 gtccaccattggtg-gatcggaaaccggtgcgaaa 20525945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 8513493 - 8513626
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | |||| || |||| ||||  ||| | ||||| |||||| |||||| |||  ||||| ||||||||| ||||||||    
T  8513493 agctccttccaaggacgtacccggggaataccgggttcgattcctaggggaaacaatgcttggccagtgcacatgcctctacgcacgagccagattagtc 8513592  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||| |||||||| |  ||||||||||||||||    
T  8513593 gtccacctttggtgggtcggaaaccggtgcgaaa 8513626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 23247458 - 23247374
Alignment:
Q  43 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttg 127  Q
    ||||||| |||| |||| |||||||||||||||||| |||||  ||||  ||||| ||||||||| ||||||||||||| |||||    
T  23247458 aatatcgggttcgattcccaggaggaacaacgcttgatcagtatgcatgcctctacgcacgagccagattagtcgtccacctttg 23247374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 38897803 - 38897704
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaacccaagaataaaaa 164  Q
    |||||||||||||| ||||||||||  ||||| ||||||||||||||||| | ||| |||||||| ||| ||||||| |||||||| |||| || |||||    
T  38897803 ggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagttgcccacctttggtg-gatcggaaaccagtgcgaaagccaaaaaaaaaaa 38897705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 42291588 - 42291505
Alignment:
Q  67 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 150  Q
    ||||||||||||| |||||| |||  ||||| ||||||||||||||||||||||| ||||| || ||| ||||||||||||||||    
T  42291588 gaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtcgtccacctttgatg-gatcggaaaccggtgcgaaa 42291505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 150
Target Start/End: Original strand, 23383665 - 23383764
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||| |||| |||| |||||||||||||| |||||||| |  ||||| ||| |||| |||||||||||||| |||||||| |  |||||| |||||||||    
T  23383665 gttcgattcccagggggaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaactggtgcgaaa 23383764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 25417316 - 25417217
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | |||| || |||| |||| |||| |||||||||||||| ||||||||||  ||||| | ||||||||||||||||    
T  25417316 agctccttccaaggacgtactcggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgaacgagccggattagtc 25417217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 9812846 - 9812984
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | |||| || |||| ||||  |||||||||||||||||| ||||| ||||   |||| ||| || |||||||||||    
T  9812846 agctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcttctacgcatgaaccggattagtc 9812945  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    | ||| |||||||| |   ||||||||||||||| ||||    
T  9812946 gcccacctttggtgggtcagaaaccggtgcgaaagccaa 9812984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 12766105 - 12766243
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | |||| || |||| ||||| ||||||||||| |||||| ||||| ||||  ||||| ||| || || ||||||||    
T  12766105 agctccttccaaggacgtacccggggaataccgggttcgattctgaggaggaacaatgcttggccagtgtgcatgcctctacgcatgaaccagattagtc 12766204  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    | ||| |||||||| |   ||||||||||||||| ||||    
T  12766205 gcccacctttggtgggtcagaaaccggtgcgaaagccaa 12766243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 18262717 - 18262651
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcg 117  Q
    |||||||| ||||| |||||||||||||  ||||||||||| |||||  ||||||||||||||||||    
T  18262717 gttctattttcagggggaacaacgcttgaccagtgcgcatacctctacacacgagccggattagtcg 18262651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 35638140 - 35638062
Alignment:
Q  43 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtcca 121  Q
    ||||| || ||| ||| ||||||||||||||| |||||||||| ||||| ||||| ||||||| | |||||||||||||    
T  35638140 aatattgaattcgattttcaggaggaacaacgtttggtcagtgtgcatacctctacgcacgagtcagattagtcgtcca 35638062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 43399145 - 43399235
Alignment:
Q  60 tcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||| |||| ||||||||| ||||||||||  ||||| |||||||| ||||||||||||||  ||||||  |  ||||||||||||||||    
T  43399145 tcagggggaataacgcttggccagtgcgcatgcctctacgcacgagcaggattagtcgtccacatttggttggtcggaaaccggtgcgaaa 43399235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 166
Target Start/End: Complemental strand, 4016380 - 4016239
Alignment:
Q  25 ccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatct 124  Q
    |||||||||||   | ||||||||| |||| ||| ||||| |||||||| ||||| ||||||||||  |||||  |||||||||||||||| |  || |     
T  4016380 ccaaggacgtacctgagaaatatcgggttcgattatcagggggaacaacacttggccagtgcgcatgcctctacacacgagccggattagttgctcacca 4016281  T
Q  125 ttggtgtgatggaaaccggtgcgaaacccaagaataaaaaac 166  Q
    |||||| |  ||||||| |||||||| |||| || |||||||    
T  4016280 ttggtgggtcggaaaccagtgcgaaagccaaaaaaaaaaaac 4016239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 40117402 - 40117522
Alignment:
Q  30 gacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggt 129  Q
    ||||||| || | |||||||| ||| |||  |||| |||||||||||||| ||||||||||  ||||| ||| ||||||||||| |||| || |||||||    
T  40117402 gacgtattcggggaatatcgaattcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattaatcgttcacctttggt 40117501  T
Q  130 gtgat-ggaaaccggtgcgaaa 150  Q
    | ||| | ||||||||||||||    
T  40117502 g-gatcgaaaaccggtgcgaaa 40117522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 7308489 - 7308397
Alignment:
Q  25 ccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcg 117  Q
    ||||||||||||  | | ||||||| |||| |||| |||| |||||||||||||| |||||| |||  ||||| ||| |||||||||||||||    
T  7308489 ccaaggacgtatttgaggaatatcgggttcgattcccagggggaacaacgcttgggcagtgcacatgcctctacgcatgagccggattagtcg 7308397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 150
Target Start/End: Original strand, 7336604 - 7336726
Alignment:
Q  27 aaggacgtatgcgtgaaatatcgagttctatt-ctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctt 125  Q
    |||||||||| || | ||||||| |||| ||| || ||||| ||||||||||  |||||||||||  ||||| ||||||||||||||| ||||| | |||    
T  7336604 aaggacgtatccgaggaatatcgggttcgatttctaaggag-aacaacgctttatcagtgcgcatgcctctacgcacgagccggattaatcgtctacctt 7336702  T
Q  126 tggtgtgatggaaaccggtgcgaaa 150  Q
    ||||| |||  ||||||||||||||    
T  7336703 tggtg-gataaaaaccggtgcgaaa 7336726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 18294568 - 18294504
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 130  Q
    |||||||||||||||||||||||||| |||||  || || |||||||| ||| ||||||||||||    
T  18294568 ggaacaacgcttggtcagtgcgcatacctctacacatgaaccggattaatcgcccatctttggtg 18294504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 155
Target Start/End: Original strand, 24499010 - 24499094
Alignment:
Q  71 aacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    |||||||| |||||||||||  ||||| | ||||||||||||| | |||||||||||||| | ||||||  ||||||||| ||||    
T  24499010 aacgcttgatcagtgcgcatgcctctacgtacgagccggattaatagtccatctttggtgggttggaaattggtgcgaaagccaa 24499094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 165
Target Start/End: Complemental strand, 39099868 - 39099764
Alignment:
Q  61 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaata 160  Q
    |||| |||||||| ||||| |||||| |||  ||||| ||| ||||||||||||||| ||| |||||||| |  |||||||||||| ||| |||| || |    
T  39099868 cagggggaacaacacttggccagtgcacatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcaaaagccaaaaaaa 39099769  T
Q  161 aaaaa 165  Q
    |||||    
T  39099768 aaaaa 39099764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 3653997 - 3653934
Alignment:
Q  67 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 130  Q
    ||||||||||||  ||||||||||  ||||| ||||||| ||||||||||||||| ||||||||    
T  3653997 gaacaacgcttgaccagtgcgcatgcctctacgcacgaggcggattagtcgtccacctttggtg 3653934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 155
Target Start/End: Original strand, 13664277 - 13664372
Alignment:
Q  60 tcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    ||||| |||||||| ||||| ||||||||||  ||||| ||| ||||| ||||| |||  || ||||||||||  |||||||||||||||| ||||    
T  13664277 tcagggggaacaacacttggccagtgcgcatgcctctacgcatgagccagattaatcgatcacctttggtgtgtcggaaaccggtgcgaaagccaa 13664372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 20255385 - 20255476
Alignment:
Q  59 ctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||||| ||||||| ||||  ||||||||||  ||||| ||| ||| ||||||||||||||| |||||||| |  |||||| |||||||||    
T  20255385 ctcaggacgaacaacacttgaccagtgcgcatgcctctacgcatgagtcggattagtcgtccacctttggtgagtcggaaactggtgcgaaa 20255476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 24463969 - 24463910
Alignment:
Q  67 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatcttt 126  Q
    |||||||| |||| ||||||||||  ||||||||||||||||||||||||| ||| ||||    
T  24463969 gaacaacgattggccagtgcgcatgcctctatgcacgagccggattagtcgcccaccttt 24463910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 130
Target Start/End: Original strand, 30995129 - 30995208
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 130  Q
    |||| |||| |||| |||||||| ||||| ||| ||||||  ||||| |||||||||||||||||||  |||||||||||    
T  30995129 gttcgattcccagggggaacaacacttggccagggcgcatgcctctacgcacgagccggattagtcgctcatctttggtg 30995208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 35403645 - 35403558
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacga 104  Q
    ||||||| |||||||||||  || |||||| || |||| ||||| ||| |||||||||||||| || ||||||| |||||| ||||||    
T  35403645 agctccttccaaggacgtactcgggaaataccgggttcgattctaagggggaacaacgcttggccaatgcgcatgtctctacgcacga 35403558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 7736871 - 7736925
Alignment:
Q  43 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 97  Q
    |||||||||||| ||||||||||  ||||||| ||||||||||| ||||||||||    
T  7736871 aatatcgagttcgattctcaggacaaacaacgtttggtcagtgcacatatctcta 7736925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 12704988 - 12705126
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | |||| || |||| ||||  |||||||||||||||||  ||||| ||||   |||| ||| || |||||||||||    
T  12704988 agctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttctacgcatgaaccggattagtc 12705087  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    | ||| |||||||| |   ||||||||||||||| ||||    
T  12705088 gcccacctttggtgggtcagaaaccggtgcgaaagccaa 12705126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 164
Target Start/End: Original strand, 30349602 - 30349700
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaa 164  Q
    ||||||| | |||| ||||||||||  ||||||||| |||| | |||||||||||| ||| |||| |  |||||||||||||||| |||| || |||||    
T  30349602 ggaacaatgattggccagtgcgcatgcctctatgcatgagctgaattagtcgtccaccttaggtgggccggaaaccggtgcgaaagccaaaaaaaaaaa 30349700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 155
Target Start/End: Complemental strand, 41163592 - 41163455
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| ||||| |||||  || | |||| || |||| |||| |||| ||||||||| |||| |||||| ||| |||||| ||| |||| |||||||||    
T  41163592 agctccttccaagaacgtacccggggaataccgggttcgattcccagg-ggaacaacgtttggccagtgcacatgtctctacgcatgagctggattagtc 41163494  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    ||||| |||| ||| |  |||||| ||||||||| ||||    
T  41163493 gtccaccttttgtgggtcggaaactggtgcgaaagccaa 41163455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 5079349 - 5079418
Alignment:
Q  61 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 130  Q
    |||| |||||| |||||||||| |||||||   |||| ||||||||||||||||||| ||| ||||||||    
T  5079349 cagggggaacagcgcttggtcaatgcgcatgcttctacgcacgagccggattagtcgcccacctttggtg 5079418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 11845934 - 11845801
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || ||||||||| |||| |||   ||| ||||||||| |||| ||||||||||  ||||| | | |||||| |||| ||    
T  11845934 agctccttccaaggacgtacccgagaaatatcgggttcgatttcgagggggaacaacgtttggccagtgcgcatgcctctacgtatgagccgaattaatc 11845835  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    | ||| ||||| || | |||||||||||| ||||    
T  11845834 gcccacctttgatgggttggaaaccggtgtgaaa 11845801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 14728109 - 14728190
Alignment:
Q  69 acaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||||||||||||||||||||  ||||| ||| ||||||||||||| |  || ||||| || |  ||||||||||||||||    
T  14728109 acaacgcttggtcagtgcgcatgcctctacgcatgagccggattagttgctcacctttgatgggtcggaaaccggtgcgaaa 14728190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 126
Target Start/End: Original strand, 21487617 - 21487697
Alignment:
Q  43 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatcttt 126  Q
    |||||||||||| ||| ||||||||||||||| ||||  |||||||||  ||||   |||||||||||||||||| ||| ||||    
T  21487617 aatatcgagttcgattttcaggaggaacaacgtttggctagtgcgcatgcctct---cacgagccggattagtcgcccaccttt 21487697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 42861300 - 42861203
Alignment:
Q  68 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    |||||| ||||| ||||||||||  ||||| ||| ||||||||||| ||||||| | |||||| |  ||| |||||||||||| |||| || ||||||    
T  42861300 aacaacacttggccagtgcgcatgcctctacgcatgagccggattaatcgtccaccattggtgggtcggagaccggtgcgaaagccaaaaaaaaaaaa 42861203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 24653935 - 24653832
Alignment:
Q  26 caaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctt 125  Q
    ||||||||||| || | ||||| | |||| ||| |||||  ||||||| ||||||||||||||||| ||||| |||  |||||||||| ||||||| | |    
T  24653935 caaggacgtatccggggaatatagggttcgattttcagggagaacaacacttggtcagtgcgcatacctctacgca-tagccggattaatcgtccaccat 24653837  T
Q  126 tggtg 130  Q
    |||||    
T  24653836 tggtg 24653832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 127
Target Start/End: Original strand, 24875369 - 24875429
Alignment:
Q  67 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttg 127  Q
    |||||||| |||  |||||||||| |||||| ||||||||||||||| ||||||| |||||    
T  24875369 gaacaacgtttgaccagtgcgcatgtctctacgcacgagccggattaatcgtccacctttg 24875429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 14974431 - 14974344
Alignment:
Q  43 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 130  Q
    ||||||| |||| ||||| | | ||||||||  |||| |||||| |||  ||||| ||| ||||||||||||||||||| ||||||||    
T  14974431 aatatcgggttcgattctaaaggggaacaacatttggccagtgcacatgcctctacgcatgagccggattagtcgtccacctttggtg 14974344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 35006819 - 35006769
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    |||||||||||||||||||| ||||  ||||| ||||||||| ||||||||    
T  35006819 ggaacaacgcttggtcagtgtgcatgcctctacgcacgagccagattagtc 35006769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 155
Target Start/End: Original strand, 40773331 - 40773385
Alignment:
Q  101 acgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    ||||| |||||||||||| ||||||||||| |  |||||||||||||||| ||||    
T  40773331 acgagtcggattagtcgttcatctttggtgcgtcggaaaccggtgcgaaagccaa 40773385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 36783303 - 36783364
Alignment:
Q  103 gagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaa 164  Q
    ||||||||||||||||||| | |||||| | ||||||||||||| ||| |||| || |||||    
T  36783303 gagccggattagtcgtccaccattggtgggttggaaaccggtgcaaaagccaaaaaaaaaaa 36783364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 27648472 - 27648425
Alignment:
Q  103 gagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 150  Q
    |||||||||||||||||||||||||||| ||| |||||||| |||||||    
T  27648472 gagccggattagtcgtccatctttggtg-gatcggaaaccgatgcgaaa 27648425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 8763965 - 8764103
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | ||||||| ||||  ||| |||| |||||||| ||||| ||||||||||  ||||| ||||||||||||||||||    
T  8763965 agctccttccaaggacgtacccggggaatatcgggttcgtttcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtc 8764064  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    ||||| | |||||| |  |||||||||||||||| ||||    
T  8764065 gtccaccgttggtgggtcggaaaccggtgcgaaagccaa 8764103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 26325786 - 26325919
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    |||||||  ||||||||||| || | ||||||| |||| |||| |||  |||||||| ||||||||||||||||  ||||| ||| ||||||||||||||    
T  26325786 agctcctttcaaggacgtatccgaggaatatcgggttcgattcccagcgggaacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtc 26325885  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||| | |||||| |  ||||||||||||||||    
T  26325886 gtccaccattggtgggtcggaaaccggtgcgaaa 26325919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 41663990 - 41663842
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| | |||||||||| || | |||| || |||| |||| |||| |||||||| ||||||||||||||||  ||||| ||| |||| |||||||||    
T  41663990 agctccttctaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgcatgagctggattagtc 41663891  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    ||||| | |||||| |  |||||||||||||||| |||| || ||||||    
T  41663890 gtccaccattggtgggtcggaaaccggtgcgaaagccaaaaaaaaaaaa 41663842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 43959954 - 43959817
Alignment:
Q  18 gctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcg 117  Q
    |||||| |||| ||||||  || | ||||||| |||| |||| |||| |||||||||||||| ||||||||||  ||||| |||||||||||||||||||    
T  43959954 gctccttccaatgacgtacccggggaatatcgggttcaattcccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcg 43959855  T
Q  118 tccatctttggtgtgat-ggaaaccggtgcgaaacccaa 155  Q
     ||| |||| ||| ||| |||||||||||||||| ||||    
T  43959854 cccacctttagtg-gatcggaaaccggtgcgaaagccaa 43959817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 5855496 - 5855629
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| || | |||| || |||| |||| ||||||||||||||||||| ||||||||||  ||||| ||| ||| ||||||||||    
T  5855496 agctccttccaaggacgtattcggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgaggcggattagtc 5855595  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    || || |||| ||| |  |||||||| |||||||    
T  5855596 gttcacctttagtgggtcggaaaccgatgcgaaa 5855629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 155
Target Start/End: Complemental strand, 17642104 - 17642000
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||| |||| |||| |||||||| ||||| ||||||||||  ||||| ||||||||||||||||||||||| |||||||| |  |||||| |||||||||    
T  17642104 gttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaactggtgcgaaa 17642005  T
Q  151 cccaa 155  Q
     ||||    
T  17642004 gccaa 17642000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 165
Target Start/End: Original strand, 37339846 - 37339942
Alignment:
Q  69 acaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    ||||||||||| ||||||||||  ||| | ||||||||||||||||||| ||| |||||||| | ||||||||||||||||| |||| || ||||||    
T  37339846 acaacgcttggccagtgcgcatgcctcaacgcacgagccggattagtcgcccacctttggtgggttggaaaccggtgcgaaagccaaaaaaaaaaaa 37339942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 10422762 - 10422895
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||| ||||||| || | |||| || |||| |||   |||||||||||| ||||| ||||||||||  ||||| ||| ||||||||||||||    
T  10422762 agctccttccaatgacgtattcggggaataccgggttcgatttctaggaggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 10422861  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||| |||||||  |  ||||||||||||||||    
T  10422862 gtccacctttggtaagtcggaaaccggtgcgaaa 10422895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 127
Target Start/End: Complemental strand, 33498948 - 33498863
Alignment:
Q  42 aaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttg 127  Q
    ||||| || |||| ||||||||||||| |||||||||| ||||||||||  ||||| ||| ||||||||||||||||||| |||||    
T  33498948 aaataccgggttcgattctcaggaggagcaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttg 33498863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 45362016 - 45361883
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  |  | |||| || |||| |||||||||||||||||||||||| ||||||||||  | ||| |||  |||||||||||||    
T  45362016 agctccttccaaggacgtaccctgggaataccgggttcgattctcaggaggaacaacgcttggccagtgcgcatgccactacgcataagccggattagtc 45361917  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    || || |||| ||| |  ||||||||||||||||    
T  45361916 gttcacctttagtgggtcggaaaccggtgcgaaa 45361883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 17092599 - 17092499
Alignment:
Q  29 ggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttgg 128  Q
    |||||||| || |||||||||||||| ||| ||||| | ||||||| |||| ||||| | ||  ||||| ||||||||||||||||||||||| ||||||    
T  17092599 ggacgtattcgggaaatatcgagttcgattttcaggggaaacaacgattggccagtgtgtatgcctctacgcacgagccggattagtcgtccacctttgg 17092500  T
Q  129 t 129  Q
    |    
T  17092499 t 17092499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 165
Target Start/End: Original strand, 18915849 - 18915989
Alignment:
Q  25 ccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatct 124  Q
    |||||||||||  || | |||| || |||| |||| |||| |||||||| ||||| ||||| ||||  ||||| |||||||||||||||||||  || |     
T  18915849 ccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcgctcacca 18915948  T
Q  125 ttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    |||||| | ||||||||||||||||| |||| || ||||||    
T  18915949 ttggtgggttggaaaccggtgcgaaagccaaaaaaaaaaaa 18915989  T

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Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 129
Target Start/End: Complemental strand, 33418197 - 33418137
Alignment:
Q  69 acaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggt 129  Q
    ||||||||||| ||||||||||  ||||||||||||||||||||||||||||| |||||||    
T  33418197 acaacgcttggccagtgcgcatgcctctatgcacgagccggattagtcgtccacctttggt 33418137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 14254394 - 14254292
Alignment:
Q  25 ccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatct 124  Q
    |||||||||||| || | |||| ||||||| ||| ||||| |||||||||||||| |||| |||||  || || ||| ||||||||||||||||||| ||    
T  14254394 ccaaggacgtattcggggaataccgagttcgattttcagggggaacaacgcttggccagtacgcatgcctttacgcatgagccggattagtcgtccacct 14254295  T
Q  125 ttg 127  Q
    |||    
T  14254294 ttg 14254292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 50371943 - 50371835
Alignment:
Q  42 aaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgat-ggaaac 140  Q
    ||||| || |||| ||| |||||| ||||||||||||| |||| |||||   |||| |||| |||||||||||||| |||||||||||| ||| ||||||    
T  50371943 aaatagcgtgttcgattttcaggaagaacaacgcttggccagtacgcatgcttctacgcacaagccggattagtcgcccatctttggtg-gatcggaaac 50371845  T
Q  141 cggtgcgaaa 150  Q
    ||||||||||    
T  50371844 cggtgcgaaa 50371835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 49078088 - 49078236
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| | |||||||||| || | |||| || |||| |||| |||| | |||||| ||||| ||||||||||  ||||| ||| ||||||||||||||    
T  49078088 agctccttctaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 49078187  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaaa 165  Q
    || || | |||||  |  |||||||||||||||| |||| || ||||||    
T  49078188 gttcaccattggtaggtcggaaaccggtgcgaaagccaaaaaaaaaaaa 49078236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 150
Target Start/End: Complemental strand, 4581758 - 4581683
Alignment:
Q  75 cttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||| ||||||||||  ||||| |||||||||||| |||||||||| |||||||| |  ||||||||||||||||    
T  4581758 cttggccagtgcgcatgcctctacgcacgagccggaatagtcgtccacctttggtgggtcggaaaccggtgcgaaa 4581683  T

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Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 32845 - 32947
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||   | | ||||||| || | |||| |||||||||||||||||||||||||| |||  ||||| ||| |||||| |||||||    
T  32845 agctccttccaaggacgtaccgggggaatatcgggtccgattcccaggaggaacaacgcttggtcagtgcacatgcctctacgcatgagccgaattagtc 32944  T
Q  117 gtc 119  Q
    |||    
T  32945 gtc 32947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 127
Target Start/End: Original strand, 10336490 - 10336600
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||| ||||||| ||   ||||||| |||| ||| ||||| |||||||||||||  ||||||||||  ||||| ||| ||||||||||| ||    
T  10336490 agctccttccaaagacgtatccggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattaatc 10336589  T
Q  117 gtccatctttg 127  Q
    ||||| |||||    
T  10336590 gtccacctttg 10336600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 18649486 - 18649353
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| ||||||||||||  |   ||||||| |||| ||| ||||| |||||||||||||  ||||||||||  ||||| | ||||||| ||||| ||    
T  18649486 agctccttccaaggacgtatctggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgtacgagccagattaatc 18649387  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    | ||| |||| |||   |||||||||||||||||    
T  18649386 gcccacctttagtggattggaaaccggtgcgaaa 18649353  T

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Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 155
Target Start/End: Original strand, 44969673 - 44969776
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaa 149  Q
    |||| ||||||||||| |||||||||||| ||||| ||||  | ||| ||| ||||||||||||||||||||| |||||| ||| ||||||||||| |||    
T  44969673 gttcgattctcaggag-aacaacgcttggccagtgtgcatgcccctacgcatgagccggattagtcgtccatcattggtg-gatcggaaaccggtgtgaa 44969770  T
Q  150 acccaa 155  Q
    | ||||    
T  44969771 agccaa 44969776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 50503495 - 50503362
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    |||||||  ||||||||||| || | ||||||| |||| |||| |||| |||||||| ||||  ||||||||||  ||||| |||||||||||||| |||    
T  50503495 agctcctttcaaggacgtatccggggaatatcgggttcgattcccagggggaacaacacttgaccagtgcgcatgcctctacgcacgagccggatttgtc 50503396  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    | ||| |  ||||| |  |||||||| |||||||    
T  50503395 gcccaccaatggtgggtcggaaaccgatgcgaaa 50503362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 129
Target Start/End: Complemental strand, 5063926 - 5063866
Alignment:
Q  69 acaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggt 129  Q
    ||||||||||| ||||||| || ||||||||||||||| |||||||||| ||| |||||||    
T  5063926 acaacgcttggccagtgcgtatgtctctatgcacgagctggattagtcgcccacctttggt 5063866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 150
Target Start/End: Complemental strand, 9659248 - 9659180
Alignment:
Q  82 agtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||||||||  || || ||| ||||||||||||||||||| |||||||| | |||||||||||||||||    
T  9659248 agtgcgcatgcctttacgcatgagccggattagtcgtccacctttggtgggttggaaaccggtgcgaaa 9659180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 121
Target Start/End: Original strand, 10507716 - 10507776
Alignment:
Q  61 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtcca 121  Q
    |||||||||||||| |||| ||||| ||||| ||||| ||| |||||||||||||||||||    
T  10507716 caggaggaacaacgtttggccagtgtgcatacctctacgcatgagccggattagtcgtcca 10507776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 10173055 - 10172972
Alignment:
Q  67 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||||||||||| |||||| |||  ||||| ||| ||||||||||| ||| ||| |||||||| |  ||||||||||||||||    
T  10173055 gaacaacgcttggccagtgcccatgcctctacgcatgagccggattactcgcccacctttggtgggtcggaaaccggtgcgaaa 10172972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 33004149 - 33004050
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| || | |||||||  ||| |||  |||| | ||||| |||||| ||||||||||  ||||| ||||||||||||||||||    
T  33004149 agctccttccaaggacgtatccggggaatatcggattcgatttccaggggaaacaatgcttggccagtgcgcatgcctctacgcacgagccggattagtc 33004050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 130
Target Start/End: Complemental strand, 45726533 - 45726454
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 130  Q
    |||| |||||||||||||| |||  |||| ||||||| || |||||| ||| |||||||||||||||| || ||||||||    
T  45726533 gttcgattctcaggaggaataacatttggccagtgcgtatgtctctacgcatgagccggattagtcgttcacctttggtg 45726454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 2567301 - 2567383
Alignment:
Q  68 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||||||||||| ||||||||||  |||||  |||||| | |||||| ||||||||||||||| |  |||||||||| |||||    
T  2567301 aacaacgcttggccagtgcgcatgcctctactcacgagtcagattagccgtccatctttggtgggtcggaaaccggtacgaaa 2567383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 16263563 - 16263652
Alignment:
Q  61 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 150  Q
    ||||||||||||||||||| ||||||||||  ||||| |||  ||||||| ||||||||||  |||| || ||| ||||||||||||||||    
T  16263563 caggaggaacaacgcttggccagtgcgcatgcctctacgcataagccggaatagtcgtccacttttgatg-gatcggaaaccggtgcgaaa 16263652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 2981065 - 2980932
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| ||| |||||||| || | ||||  | |||| |||| |||  |||||||| ||||| ||||| ||||  ||||| ||||||| ||||||||||    
T  2981065 agctccttccagggacgtatccggggaatactgggttcgattcccagcgggaacaacacttggccagtgtgcatgcctctacgcacgagtcggattagtc 2980966  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||||| ||| ||| |  ||||| ||||||||||    
T  2980965 gtccatgtttagtgggtcggaaatcggtgcgaaa 2980932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 16956440 - 16956573
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | |||| || ||||  |||||||| | ||||||| |||  ||||||||||  ||||| ||||||||||||||||||    
T  16956440 agctccttccaaggacgtacccggggaataccgtgttcggttctcaggggtaacaacgtttgaccagtgcgcatgcctctacgcacgagccggattagtc 16956539  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
       || |||||||| |  ||||||| ||||||||    
T  16956540 actcacctttggtgggtcggaaaccagtgcgaaa 16956573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 25178709 - 25178609
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||||| ||||||||||  | |||||| ||||||||||||  | | |||| ||||||||| ||||||||||| |||||   || |||||||||||||    
T  25178709 agctcctactaaggacgtatttgggaaataccgagttctattcctaag-ggaataacgcttggccagtgcgcatacctctacagacaagccggattagtc 25178611  T
Q  117 gt 118  Q
    ||    
T  25178610 gt 25178609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 146
Target Start/End: Complemental strand, 30927861 - 30927732
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||   | ||||||||| |||| |||  |||  |||||||||||||| || || ||||  ||||| ||| ||||||||||||||    
T  30927861 agctccttccaaggacgtacctgggaaatatcgggttcgatttccagagggaacaacgcttggccaatgtgcatgcctctacgcatgagccggattagtc 30927762  T
Q  117 gtccatctttggtgtgatggaaaccggtgc 146  Q
    |||||  ||||||| |   |||||||||||    
T  30927761 gtccacttttggtgggtcagaaaccggtgc 30927732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 48761197 - 48761262
Alignment:
Q  64 gaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggt 129  Q
    ||||||||||| ||||||||||  |||  ||||| |||||||| |||||||||||||| |||||||    
T  48761197 gaggaacaacgtttggtcagtggacatgcctctacgcacgagctggattagtcgtccacctttggt 48761262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 146
Target Start/End: Complemental strand, 31576656 - 31576552
Alignment:
Q  42 aaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaacc 141  Q
    ||||| || |||| ||||||||| | ||||| |||||| || ||||  |  ||||| ||| ||||||| ||||||||||||||||| ||||  |||||||    
T  31576656 aaataccgggttcgattctcaggggaaacaatgcttggccaatgcgtgtgcctctacgcatgagccggcttagtcgtccatctttgatgtgtcggaaacc 31576557  T
Q  142 ggtgc 146  Q
    |||||    
T  31576556 ggtgc 31576552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 150
Target Start/End: Original strand, 5504039 - 5504138
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||| |||||||||   ||||||||||| | ||||| |||  ||||| ||| ||||||||||||||||||| ||||| || |  |||||||||| |||||    
T  5504039 gttcgattctcagggaaaacaacgcttgattagtgcacatgcctctacgcatgagccggattagtcgtccacctttgatgggtcggaaaccggtacgaaa 5504138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 17988743 - 17988688
Alignment:
Q  68 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatc 123  Q
    ||||| |||||| ||||||||||| ||||| ||| || ||||||||||||||||||    
T  17988743 aacaatgcttggccagtgcgcatacctctacgcatgaaccggattagtcgtccatc 17988688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 21849290 - 21849239
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcg 117  Q
    ||||||||||||||  |||||||||  ||||| |||||||||||||||||||    
T  21849290 ggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcg 21849239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 48798204 - 48798105
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||| ||||||| || | ||||||| |||| |||  |||| |||||||||||||   |||||||||  ||||| ||| ||||||||||||||    
T  48798204 agctccttccaatgacgtatccggggaatatcgggttcgatttccagggggaacaacgcttgactagtgcgcatgcctctacgcatgagccggattagtc 48798105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 121
Target Start/End: Original strand, 13262107 - 13262161
Alignment:
Q  67 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtcca 121  Q
    |||||||| ||||||| | ||||| |||||| ||||||| |||||||||||||||    
T  13262107 gaacaacgtttggtcaatacgcatgtctctacgcacgagtcggattagtcgtcca 13262161  T

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Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 115
Target Start/End: Original strand, 6563464 - 6563513
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagt 115  Q
    |||||||||||||| |||||| ||| |||||| ||||||||| |||||||    
T  6563464 ggaacaacgcttggccagtgcacatgtctctacgcacgagccagattagt 6563513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 28324688 - 28324615
Alignment:
Q  43 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||| |||| | || | |||||| ||||||||||||||||  ||||| ||| ||||||||||||||    
T  28324688 aatatcgggttcgattccccggggaaacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtc 28324615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 76 - 121
Target Start/End: Original strand, 35908791 - 35908836
Alignment:
Q  76 ttggtcagtgcgcatatctctatgcacgagccggattagtcgtcca 121  Q
    |||||||||||||||  ||||| ||| |||||||||||||||||||    
T  35908791 ttggtcagtgcgcatgcctctacgcatgagccggattagtcgtcca 35908836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 150
Target Start/End: Complemental strand, 11397974 - 11397890
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||||||| |||| || |||| ||  ||||| ||| ||| ||||||||||||||| |||||||| |  ||||| ||||||||||    
T  11397974 ggaacaacgtttggccaatgcgtatgcctctacgcatgagtcggattagtcgtccacctttggtgggtcggaaatcggtgcgaaa 11397890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 150
Target Start/End: Original strand, 26660161 - 26660244
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||||||  ||| ||||| |||||  ||||| ||| ||||||||||||||| ||| |||||||| |  ||||||||||||||||    
T  26660161 ggaacaacatttgatcagtacgcatgcctctacgcatgagccggattagtcg-ccacctttggtgggtcggaaaccggtgcgaaa 26660244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 155
Target Start/End: Original strand, 34697343 - 34697447
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||| ||||| ||| |||||||| |||||  |||| ||||  ||||| ||| ||||||||||||||| |||  |||| || | ||||||||| |||||||    
T  34697343 gttcgattcttagggggaacaacacttggctagtgtgcatgcctctacgcatgagccggattagtcgcccacttttgatgggttggaaaccgatgcgaaa 34697442  T
Q  151 cccaa 155  Q
     ||||    
T  34697443 gccaa 34697447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 155
Target Start/End: Original strand, 41046 - 41158
Alignment:
Q  43 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccg 142  Q
    ||||||| |||| ||||||| | |||||||| ||||||||||| ||||  ||||| ||||||||||||||||||| |||||||||||| |  ||||||||    
T  41046 aatatcgggttcgattctcaaggggaacaacacttggtcagtgtgcatgcctctacgcacgagccggattagtcgcccatctttggtgagtcggaaaccg 41145  T
Q  143 gtgcgaaacccaa 155  Q
    || ||||| ||||    
T  41146 gttcgaaagccaa 41158  T

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Target: scaffold0011 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 224319 - 224426
Alignment:
Q  43 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccg 142  Q
    ||||||| |||| | |||||||  ||| |||| ||| ||||||| |||| ||||| |||||||||||||||||||||||||||||||| |  ||||||||    
T  224319 aatatcgggttcgaatctcagggagaataacgtttgatcagtgcacatacctctacgcacgagccggattagtcgtccatctttggtgggtcggaaaccg 224418  T
Q  143 gtgcgaaa 150  Q
    ||||||||    
T  224419 gtgcgaaa 224426  T

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Target: scaffold0011; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 186552 - 186626
Alignment:
Q  76 ttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    ||||||||||| |||  ||||| |||||||||||||||||||| ||||||| ||| |  ||||||||||| ||||    
T  186552 ttggtcagtgcacatgcctctacgcacgagccggattagtcgttcatctttagtgggtcggaaaccggtgtgaaa 186626  T

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Target: scaffold0002 (Bit Score: 52; Significance: 7e-21; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 17 - 164
Target Start/End: Original strand, 319398 - 319545
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||| || | |||| || |||  |||   ||| |||||||||||||| ||||||||||  ||||||||| |||| |||||||||    
T  319398 agctccttccaaggacgtatccggggaataccgggtttgatttctagggggaacaacgcttggccagtgcgcatccctctatgcatgagctggattagtc 319497  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaacccaagaataaaaa 164  Q
    ||||| |||||||| |  |||||||||||||||| |||| || |||||    
T  319498 gtccacctttggtggggcggaaaccggtgcgaaagccaaaaaaaaaaa 319545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 412159 - 412091
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtg 85  Q
    ||||||| |||||||||||| || | |||| ||||||| |||| |||| ||||||||||||||||||||    
T  412159 agctccttccaaggacgtatccggggaataccgagttcgattcacagggggaacaacgcttggtcagtg 412091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 546 - 679
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || | |||| || |||| |||| |||| |||||||| |||| |||||| ||||  ||||| | | ||||| ||||||||    
T  546 agctccttccaaggacgtacccggggaataccgggttcgattcgcagggggaacaacacttgatcagtgtgcatgcctctacgtatgagccagattagtc 645  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |  || |||||||| |  ||||||||||||||||    
T  646 gctcacctttggtgggtcggaaaccggtgcgaaa 679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 68493 - 68621
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  || ||||||||| |||| |||| |||| ||||||||||||||   ||||||||  ||||| ||||||||||||||||||    
T  68493 agctccttccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacgcttgg---gtgcgcatgcctctacgcacgagccggattagtc 68589  T
Q  117 gtccatctttggtgtgatggaaaccggtgcga 148  Q
    | ||| |||||||| |  | ||||||||||||    
T  68590 gcccacctttggtgggtcgaaaaccggtgcga 68621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 271207 - 271107
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| |||||||||||  ||   ||||||| |||| |||| |||| ||||||||||||||||||||||||| |||||| ||||||||||| ||||||    
T  271207 agctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacgcttggtcagtgcgcatgtctctacgcacgagccgggttagtc 271108  T
Q  117 g 117  Q
    |    
T  271107 g 271107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 150
Target Start/End: Original strand, 16889 - 16988
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||| ||||||||| | |||||||||||||||||||| || |||||| ||||||||| |||||||||  || |||||||| | ||||||||| |||||||    
T  16889 gttcaattctcaggggaaacaacgcttggtcagtgcgtatgtctctacgcacgagccagattagtcgctcacctttggtgggttggaaaccgatgcgaaa 16988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 9865 - 9934
Alignment:
Q  61 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 130  Q
    |||| |||||||||||||| ||||||||||  ||||| ||||||||||||||||||||||| ||||||||    
T  9865 cagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtg 9934  T

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Target: scaffold0010 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 155
Target Start/End: Complemental strand, 155805 - 155706
Alignment:
Q  56 attctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    |||| |||| ||||||||||||||  |||||||||  ||||| ||||||||||||||||||| ||| |||||||| |  |||| ||||||||||| ||||    
T  155805 attcccagggggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaagccggtgcgaaagccaa 155706  T

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Target: scaffold0291 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 150
Target Start/End: Original strand, 6865 - 6964
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||| |||| |||| |||||||| ||||| ||||||||||  ||||| ||| |||||||||||||||  || |||||||| |  ||||||||||||||||    
T  6865 gttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaa 6964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 150
Target Start/End: Complemental strand, 8800 - 8701
Alignment:
Q  51 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||| |||| |||| |||||||||||||| |||||||| |  ||||| ||| |||| |||||||||||||| |||||||| |  |||||| |||||||||    
T  8800 gttcgattcccagggggaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaactggtgcgaaa 8701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 42915 - 42832
Alignment:
Q  67 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    |||||| |||||||||||||||||  |||||  || ||||||||||||||| ||| |||||||| |  ||||||||||||||||    
T  42915 gaacaatgcttggtcagtgcgcatgcctctacacatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 42832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 12646 - 12779
Alignment:
Q  17 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 116  Q
    ||||||| ||||||||||   || | |||| || |||| ||||  |||||||||||||||||| ||||| ||||  ||||| |||||| |||||||||||    
T  12646 agctccttccaaggacgtgcccggggaataccgggttcgattcagaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtc 12745  T
Q  117 gtccatctttggtgtgatggaaaccggtgcgaaa 150  Q
    | ||| ||||| || |   |||||||||||||||    
T  12746 gcccacctttgatgggtcagaaaccggtgcgaaa 12779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 121
Target Start/End: Original strand, 26203 - 26263
Alignment:
Q  61 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtcca 121  Q
    |||| |||||||||||||| ||||| ||||  ||||| |||||||||||||||||||||||    
T  26203 cagggggaacaacgcttggccagtgtgcatgcctctacgcacgagccggattagtcgtcca 26263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 65236 - 65185
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcg 117  Q
    |||||||||||||| |||||||||| |||||| ||| |||| ||||||||||    
T  65236 ggaacaacgcttggccagtgcgcatgtctctacgcatgagctggattagtcg 65185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 115
Target Start/End: Original strand, 18657 - 18706
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagt 115  Q
    |||||||||||||| |||||| ||| |||||| ||||||||| |||||||    
T  18657 ggaacaacgcttggccagtgcacatgtctctacgcacgagccagattagt 18706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 155
Target Start/End: Original strand, 12598 - 12687
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacccaa 155  Q
    |||||||||||||  ||||||||||  ||||| ||| ||| ||||||||||| ||| ||||| ||   | ||||||||||||||| ||||    
T  12598 ggaacaacgcttgaccagtgcgcatgcctctacgcatgagtcggattagtcgcccacctttgatggattagaaaccggtgcgaaagccaa 12687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 150
Target Start/End: Original strand, 19280 - 19364
Alignment:
Q  66 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 150  Q
    ||||||||||||||  |||||||| | ||||| ||| ||||||||||||||| ||||  || ||| ||| ||||||||||||||||    
T  19280 ggaacaacgcttggctagtgcgcagacctctacgcatgagccggattagtcggccattattagtg-gatcggaaaccggtgcgaaa 19364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 2210 - 2114
Alignment:
Q  30 gacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatcttt 126  Q
    ||||||| || |||||| ||  ||| |||||||| |||||||||||||| | || ||||||   ||||||||  || ||||||||||||||| ||||    
T  2210 gacgtatccgagaaataccggattcgattctcagaaggaacaacgcttgattagcgcgcatgcttctatgcataagtcggattagtcgtccaccttt 2114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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