View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2836_low_24 (Length: 233)
Name: NF2836_low_24
Description: NF2836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2836_low_24 |
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Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 37757291 - 37757069
Alignment:
| Q |
1 |
gtatcatgatgctgatgatgatgaacacaaaggtttaatcttgtaacttttttaactctaacttttaaacttgcaacgcaagcattataatttgttattt |
100 |
Q |
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| T |
37757291 |
gtatcatgatgctgatgatgatgaacacaaaggtttaatcttttaacttttttaactctaacttttaaacttgcaacgcaagcattataatttgatattt |
37757192 |
T |
|
| Q |
101 |
tttcatgaaatgatgaatatttagtgtagtgaatattttctattggatggttacaatagtagagtatgttgtagttatttttaaaatatggttacaaagt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
37757191 |
tttcatgaaatgatgaatatttagtgtagtgaatattttctattggatggttacaatagtagagtatgttgtagttatttttaaaagatggttacaaagt |
37757092 |
T |
|
| Q |
201 |
aagcctacatgagaagatgatga |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
37757091 |
aagcctacatgagaagatgatga |
37757069 |
T |
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