View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2836_low_28 (Length: 201)
Name: NF2836_low_28
Description: NF2836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2836_low_28 |
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Alignment Details
Target: chr2 (Bit Score: 159; Significance: 7e-85; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 17110925 - 17111091
Alignment:
| Q |
16 |
attattctcttcatgatgtgattatttcagaattagaaggcatgcataagctatttcatattgattgatgaatgctccatttgattttttcgcaatacag |
115 |
Q |
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| T |
17110925 |
attattctcttcatgatgtgattatttcagaattaaaaggcatgcataagctatttcatattgattgatgaatgctccatttgattttttcgcaatacag |
17111024 |
T |
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| Q |
116 |
gttagaaggaaatccagtgagactttggtttgcttaaacattacaggaagaactttttgcttattca |
182 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17111025 |
gttagaaggaaatccagtgagagtttggtttgcttaaacattacaggaagaactttttgcttattca |
17111091 |
T |
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