View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2836_low_4 (Length: 533)

Name: NF2836_low_4
Description: NF2836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2836_low_4
NF2836_low_4
[»] chr8 (15 HSPs)
chr8 (11-434)||(25677742-25678163)
chr8 (11-243)||(25391307-25391539)
chr8 (11-229)||(25358290-25358508)
chr8 (11-370)||(25617063-25617408)
chr8 (150-300)||(25494552-25494702)
chr8 (12-147)||(9229278-9229414)
chr8 (365-434)||(25616782-25616851)
chr8 (47-140)||(44300477-44300568)
chr8 (432-473)||(25410878-25410919)
chr8 (432-473)||(25727004-25727045)
chr8 (432-469)||(25396075-25396112)
chr8 (432-473)||(25659021-25659062)
chr8 (438-473)||(25347835-25347870)
chr8 (438-473)||(25627279-25627314)
chr8 (431-476)||(25409879-25409924)
[»] scaffold0466 (2 HSPs)
scaffold0466 (11-219)||(8288-8499)
scaffold0466 (430-473)||(1764-1807)
[»] chr1 (2 HSPs)
chr1 (12-137)||(29360204-29360330)
chr1 (12-106)||(5716885-5716978)
[»] chr6 (4 HSPs)
chr6 (12-137)||(1094446-1094573)
chr6 (12-152)||(34249307-34249448)
chr6 (12-110)||(1090688-1090785)
chr6 (14-113)||(20728209-20728307)
[»] chr5 (3 HSPs)
chr5 (12-140)||(32743607-32743736)
chr5 (12-124)||(16098386-16098498)
chr5 (20-108)||(39777398-39777485)
[»] scaffold0009 (1 HSPs)
scaffold0009 (12-108)||(3228-3324)
[»] chr3 (1 HSPs)
chr3 (12-107)||(25080007-25080103)
[»] chr2 (1 HSPs)
chr2 (35-111)||(40709191-40709267)
[»] chr4 (1 HSPs)
chr4 (14-140)||(18982262-18982387)


Alignment Details
Target: chr8 (Bit Score: 360; Significance: 0; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 11 - 434
Target Start/End: Complemental strand, 25678163 - 25677742
Alignment:
Q  11 atgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcgaggcc 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  25678163 atgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctttccaaggtttacacaactacgtatctgaactcgtgcactcgaggcc 25678064  T
Q  111 agcactttggagcttcataaacaatgcccagaataatcgagaatagaatataaaataatgaacttgatttttgacaacttatctgctccccaatgtttcc 210  Q
    ||||  ||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25678063 agcatgttggagcttcacaaacaatgcccaaaataattgagaatagaatataaaataatgaacttgatttttgacaacttatctgctccccaatgtttcc 25677964  T
Q  211 atacgtcttctatatatatggtgcaagtggccacataatggaagaatttcctcacattactgttgccacgttctcatatcacaatcaatggtatatattg 310  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||    
T  25677963 atacgtcttctatatatatggtgcaagtgaccacataatggaagaatttcctcacattaccgttgccacgttctcatatcacaatcaat-gaatatattg 25677865  T
Q  311 atggccataaacacccaacggttggatactttgttttgcaacggtaggcaattaaaccaaatagttatattgtttcaatgagacacaaatttgtagcagt 410  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25677864 atggtcataaacacccaacggttggatactttgttttgcaacggtaggcaattaaaccaaatagttata-tgtttcaatgagacacaaatttgtagcagt 25677766  T
Q  411 aaatgagacttgattgtcattata 434  Q
    |||||| |||||||||||||||||    
T  25677765 aaatgacacttgattgtcattata 25677742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 25391539 - 25391307
Alignment:
Q  11 atgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcgaggcc 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25391539 atgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactatgtatctgaactcgtgcactcgaggcc 25391440  T
Q  111 agcactttggagcttcataaacaatgcccagaataatcgagaatagaatataaaataatgaacttgatttttgacaacttatctgctccccaatgtttcc 210  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25391439 agcactttggagcttcataaacaatgcccaaaataatcgagaatagaatataaaacaatgaacttgatttttgacaacttatctgctccccaatgtttcc 25391340  T
Q  211 atacgtcttctatatatatggtgcaagtggcca 243  Q
    |||||||||||||||||||||||||||||||||    
T  25391339 atacgtcttctatatatatggtgcaagtggcca 25391307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 11 - 229
Target Start/End: Complemental strand, 25358508 - 25358290
Alignment:
Q  11 atgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcgaggcc 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  25358508 atgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactatgtatctgaactcgtgcactcgagacc 25358409  T
Q  111 agcactttggagcttcataaacaatgcccagaataatcgagaatagaatataaaataatgaacttgatttttgacaacttatctgctccccaatgtttcc 210  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  25358408 agcactttggagcttcataaacaatgcccaaaataatcgagaatagaatataaaacaatgaacttgatttttgacaacttatctgatccccaatgtttcc 25358309  T
Q  211 atacgtcttctatatatat 229  Q
    |||||||||||||||||||    
T  25358308 atacgtcttctatatatat 25358290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 11 - 370
Target Start/End: Complemental strand, 25617408 - 25617063
Alignment:
Q  11 atgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcgaggcc 110  Q
    |||||||||||||| |||||||||||||||||||||||||||| | |||||||| | || ||||||||||||||||         ||||||||||||||     
T  25617408 atgaaagcaaatttccggtggacctccggtgcaatccaatatctgattttgctctctaaagtttacacaactacgt---------cgtgcactcgaggct 25617318  T
Q  111 agcactttggagcttcataaacaatgcccagaataatcgagaatagaatataaaataatgaacttgatttttgacaacttatctgctccccaatgtttcc 210  Q
    | ||| ||||||||||| ||||||||||||  ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25617317 aacacgttggagcttcacaaacaatgcccaacataattgagaataaaatataaaataatgaacttgatttttgacaacttatctgctccccattgtttcc 25617218  T
Q  211 atacgtcttctatatatatggtgcaagtggccacataatggaagaatttcctcacattactgttgccacgttctcatatcacaatcaatggtatatattg 310  Q
     |||||||| |||||||||  ||   ||||||||| | ||||||||||||| |||||||| |||||||| |||||||||||||||||||| |||||||||    
T  25617217 gtacgtcttttatatatata-tg---gtggccacacactggaagaatttccacacattaccgttgccaccttctcatatcacaatcaatgatatatattg 25617122  T
Q  311 atggccataaacacccaacggttggatactttgttttgcaacggtaggcaattaaaccaa 370  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  25617121 atggccataaacacccaacggttggatac-ttgttttgcaacggtagacaattaaaccaa 25617063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 25494702 - 25494552
Alignment:
Q  150 agaatagaatataaaataatgaacttgatttttgacaacttatctgctccccaatgtttccatacgtcttctatatatatggtgcaagtggccacataat 249  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  25494702 agaatagaatataaaatgatgaacttgatttttgacaacttatctgctcccgaatgtttccatacgtcttctatatatatggtgcaagtggcgacataat 25494603  T
Q  250 ggaagaatttcctcacattactgttgccacgttctcatatcacaatcaatg 300  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25494602 ggaagaatttcctcacattaccgttgccacgttctcatatcacaatcaatg 25494552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 12 - 147
Target Start/End: Original strand, 9229278 - 9229414
Alignment:
Q  12 tgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcga-ggcc 110  Q
    |||||| ||||||||| | |||||| | ||||| ||||||||||||||||||| ||||||||||||||| | | | ||||||||||||||||  | |||     
T  9229278 tgaaagaaaattttcgatagacctcagatgcaacccaatatccggttttgctctccaaggtttacacaattgcatgtctgaactcgtgcacttaagggca 9229377  T
Q  111 agcactttggagcttcataaacaatgcccagaataat 147  Q
    | |||  |||||||||| |||||||| ||||||||||    
T  9229378 aacacaatggagcttcacaaacaatgtccagaataat 9229414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 365 - 434
Target Start/End: Complemental strand, 25616851 - 25616782
Alignment:
Q  365 aaccaaatagttatattgtttcaatgagacacaaatttgtagcagtaaatgagacttgattgtcattata 434  Q
    |||||||||||||||| |||| |||||||||||||||||||| ||||||||| ||| |||||||||||||    
T  25616851 aaccaaatagttatatagttttaatgagacacaaatttgtagtagtaaatgacactcgattgtcattata 25616782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 44300568 - 44300477
Alignment:
Q  47 caatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcgaggccagcactttggagcttcataaacaatgccca 140  Q
    |||||||| |||||||||||||||||||||||||||| |  |||||||||||  |||||| |||| ||| ||||||| ||| |||| |||||||    
T  44300568 caatatccagttttgctccccaaggtttacacaactagg--tctgaactcgtatactcgaagccaacacgttggagcctcacaaacgatgccca 44300477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 432 - 473
Target Start/End: Complemental strand, 25410919 - 25410878
Alignment:
Q  432 ataaagcacaaaaagagcggttgaggcttcataacactattt 473  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  25410919 ataaagcacaaaaagagcggttgaggcatcataacactattt 25410878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 432 - 473
Target Start/End: Complemental strand, 25727045 - 25727004
Alignment:
Q  432 ataaagcacaaaaagagcggttgaggcttcataacactattt 473  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  25727045 ataaagcacaaaaagagcggttgaggcatcataacactattt 25727004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 432 - 469
Target Start/End: Complemental strand, 25396112 - 25396075
Alignment:
Q  432 ataaagcacaaaaagagcggttgaggcttcataacact 469  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  25396112 ataaagcacaaaaagagcggttgaggcatcataacact 25396075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 432 - 473
Target Start/End: Complemental strand, 25659062 - 25659021
Alignment:
Q  432 ataaagcacaaaaagagcggttgaggcttcataacactattt 473  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  25659062 ataaagcacaaaaagagcggctgaggcatcataacactattt 25659021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 438 - 473
Target Start/End: Complemental strand, 25347870 - 25347835
Alignment:
Q  438 cacaaaaagagcggttgaggcttcataacactattt 473  Q
    ||||||||||||||||||||| ||||||||||||||    
T  25347870 cacaaaaagagcggttgaggcatcataacactattt 25347835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 438 - 473
Target Start/End: Complemental strand, 25627314 - 25627279
Alignment:
Q  438 cacaaaaagagcggttgaggcttcataacactattt 473  Q
    ||||||||||||||||||||| ||||||||||||||    
T  25627314 cacaaaaagagcggttgaggcatcataacactattt 25627279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 476
Target Start/End: Complemental strand, 25409924 - 25409879
Alignment:
Q  431 tataaagcacaaaaagagcggttgaggcttcataacactatttagt 476  Q
    ||||||| ||||||||||| |||||||| ||||| |||||||||||    
T  25409924 tataaagaacaaaaagagcagttgaggcatcatagcactatttagt 25409879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 134; Significance: 2e-69; HSPs: 2)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 8288 - 8499
Alignment:
Q  11 atgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcgaggcc 110  Q
    |||||||||||||| |  |||||||| ||||||||  |||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||     
T  8288 atgaaagcaaatttccaatggacctctggtgcaatttaatatccggttttgctccccaatgtttacacaactacgtgtctgaactcgtgcacttgaggct 8387  T
Q  111 agcactttggagcttcataaacaatgcccagaataatcgagaatagaatataaaataatgaacttgatttttgacaac---ttatctgctccccaatgtt 207  Q
    ||||| ||||||||||| ||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||   |||||||||||||| ||||    
T  8388 agcacgttggagcttcacaaacaatacccaaaataattgagaatagaatataaaataatgaacttgatttttgacaactaattatctgctccccactgtt 8487  T
Q  208 tccatacgtctt 219  Q
    ||||||||||||    
T  8488 tccatacgtctt 8499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 430 - 473
Target Start/End: Original strand, 1764 - 1807
Alignment:
Q  430 ttataaagcacaaaaagagcggttgaggcttcataacactattt 473  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  1764 ttataaagcacaaaaagagcggttgaggcatcataacactattt 1807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 1e-36; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 29360330 - 29360204
Alignment:
Q  12 tgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcgaggcc- 110  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||| |||||| ||||||||| ||||||     
T  29360330 tgaaagcaaattttcggtggacctccggtgcaacccaatatccgattttgctcctcaaggtttacacaactgcgtgtctgaattcgtgcacttgaggcca 29360231  T
Q  111 agcactttggagcttcataaacaatgc 137  Q
    | |||  ||||||||||||||||||||    
T  29360230 aacacgatggagcttcataaacaatgc 29360204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 106
Target Start/End: Complemental strand, 5716978 - 5716885
Alignment:
Q  12 tgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcga 106  Q
    |||| |||||||| ||||| || |||||||||| ||||  |||| |||||||||||||  ||||||||||| ||| ||| ||||| | |||||||    
T  5716978 tgaatgcaaatttccggtgtacttccggtgcaacccaag-tccgattttgctccccaaaatttacacaactgcgtgtctaaactcatccactcga 5716885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 2e-26; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 1094446 - 1094573
Alignment:
Q  12 tgaaagcaaattttcggtggacctccgg-tgcaatccaatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcgaggcc 110  Q
    ||||||||||||||||||||| |||||| ||||| |||| |||||||||||||||| ||||||||||||||| ||| | |||||||||||||||||||||    
T  1094446 tgaaagcaaattttcggtggatctccgggtgcaacccaa-atccggttttgctccctaaggtttacacaactgcgtgtgtgaactcgtgcactcgaggcc 1094544  T
Q  111 --agcactttggagcttcataaacaatgc 137  Q
      | |||  |||||||||| |||||||||    
T  1094545 tgaacacgatggagcttcacaaacaatgc 1094573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 12 - 152
Target Start/End: Complemental strand, 34249448 - 34249307
Alignment:
Q  12 tgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcgag-gcc 110  Q
    |||||| ||||||||||||||||||| ||||||  || ||||| ||||||||||||||| |||||| |||| | | ||||||||||||||||||||  |     
T  34249448 tgaaagaaaattttcggtggacctccagtgcaactcattatccagttttgctccccaagatttacataactgcatgtctgaactcgtgcactcgagatca 34249349  T
Q  111 agcactttggagcttcataaacaatgcccagaataatcgaga 152  Q
    | |||  ||||||||||||||||||||||| |||||| ||||    
T  34249348 aacacgatggagcttcataaacaatgcccaaaataatagaga 34249307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 1090688 - 1090785
Alignment:
Q  12 tgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcgaggcc 110  Q
    ||||||| |||||||| ||||||| | |||||| |||| |||||||||| ||||||||| ||||||||||||||| ||||||||||  |||||||||||    
T  1090688 tgaaagctaattttcgatggaccttcagtgcaacccaa-atccggttttactccccaagatttacacaactacgtgtctgaactcggacactcgaggcc 1090785  T

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Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 20728209 - 20728307
Alignment:
Q  14 aaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcgaggccagc 113  Q
    ||||||||||| |||||||| ||||||| || | || || | ||||||||| ||||  ||||||||||||||| | |||| | |||||||||||||||||    
T  20728209 aaagcaaatttccggtggacttccggtgtaacctaaaattcagttttgctctccaaaatttacacaactacgtgtttgaa-ttgtgcactcgaggccagc 20728307  T

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Target: chr5 (Bit Score: 58; Significance: 4e-24; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 32743607 - 32743736
Alignment:
Q  12 tgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcgaggcc- 110  Q
    ||||||||||||| ||||||||||||| ||||||| ||| ||| | ||||||||||||||||||||||||| | | ||||||||| |||||| ||||||     
T  32743607 tgaaagcaaatttccggtggacctccgatgcaatctaatttcctgatttgctccccaaggtttacacaactgcttgtctgaactcatgcacttgaggcca 32743706  T
Q  111 agcactttggagcttcataaacaatgccca 140  Q
    | |||  |||||||||| ||||||| ||||    
T  32743707 aacacgatggagcttcacaaacaataccca 32743736  T

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Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 124
Target Start/End: Original strand, 16098386 - 16098498
Alignment:
Q  12 tgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcgaggcca 111  Q
    |||||||||| || ||||||| |||| ||||||| ||||| ||||||||||||  ||| |||||||||||||||| | ||||||||| ||||||||||||    
T  16098386 tgaaagcaaaattccggtggatctccagtgcaattcaataaccggttttgctcttcaaagtttacacaactacgtgtgtgaactcgttcactcgaggcca 16098485  T
Q  112 gcactttggagct 124  Q
     ||| ||||||||    
T  16098486 acacgttggagct 16098498  T

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Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 39777485 - 39777398
Alignment:
Q  20 aattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcgagg 108  Q
    ||||||||||||||||||||| ||| |||  ||||||||||||||||||| |||||||||||| ||| | |||||   |||||||||||    
T  39777485 aattttcggtggacctccggtacaacccag-atccggttttgctccccaaagtttacacaactgcgtgtttgaacctatgcactcgagg 39777398  T

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Target: scaffold0009 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 3228 - 3324
Alignment:
Q  12 tgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcgagg 108  Q
    |||||||||||||| |||| | |||||||||||| ||||||||| |||| |||| ||||||||| |||| | ||| ||||||| |||||||||||||    
T  3228 tgaaagcaaatttttggtgaaactccggtgcaattcaatatccgattttactcctcaaggtttatacaatttcgtgtctgaacccgtgcactcgagg 3324  T

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Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 25080007 - 25080103
Alignment:
Q  12 tgaaagcaaattttcggtggacctccggtgcaatccaatatcc-ggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcgag 107  Q
    ||||||||||||| || |||||||||||||||| |||||| || |||||| ||||  ||||||||||||| |  || ||||||||||||||||||||    
T  25080007 tgaaagcaaatttccgctggacctccggtgcaacccaatacccgggtttttctccgtaaggtttacacaattgtgtgtctgaactcgtgcactcgag 25080103  T

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Target: chr2 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 40709267 - 40709191
Alignment:
Q  35 tccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcgaggcca 111  Q
    |||||||||| |||||||||||||||||||||||| |||||||  ||| | | ||||||| | ||||||||||||||    
T  40709267 tccggtgcaacccaatatccggttttgctccccaaagtttacattactgcatgtctgaacccatgcactcgaggcca 40709191  T

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Target: chr4 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 18982262 - 18982387
Alignment:
Q  14 aaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcgaggccagc 113  Q
    |||||||||||||| | |||||||| |  ||||| |||| || ||||||||| ||| | ||||  ||||| || ||||| | ||||||||||||| || |    
T  18982262 aaagcaaattttcgatagacctccgatataatcccatattcgattttgctcctcaaaggttacgtaactatgtgtctgacc-cgtgcactcgaggtcaac 18982360  T
Q  114 actttggagcttcataaacaatgccca 140  Q
    || ||||||||||| ||||||| ||||    
T  18982361 acattggagcttcacaaacaataccca 18982387  T

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