View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2836_low_9 (Length: 390)

Name: NF2836_low_9
Description: NF2836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2836_low_9
NF2836_low_9
[»] chr8 (38 HSPs)
chr8 (42-388)||(22511875-22512220)
chr8 (93-388)||(22519175-22519469)
chr8 (40-388)||(37189780-37190127)
chr8 (40-299)||(42891584-42891840)
chr8 (48-299)||(22926564-22926816)
chr8 (43-216)||(22921850-22922023)
chr8 (40-299)||(42890311-42890561)
chr8 (48-216)||(22520799-22520967)
chr8 (40-217)||(6845249-6845426)
chr8 (60-208)||(23570516-23570665)
chr8 (60-183)||(23573515-23573639)
chr8 (127-249)||(2189689-2189810)
chr8 (40-129)||(18180770-18180859)
chr8 (127-287)||(2687742-2687901)
chr8 (127-278)||(26374900-26375050)
chr8 (175-299)||(18180630-18180753)
chr8 (127-287)||(16598249-16598409)
chr8 (127-216)||(18468649-18468737)
chr8 (127-292)||(24578702-24578866)
chr8 (131-216)||(24731231-24731316)
chr8 (40-106)||(26150602-26150669)
chr8 (130-217)||(24731035-24731122)
chr8 (1-40)||(22171395-22171434)
chr8 (1-39)||(21940573-21940611)
chr8 (1-39)||(22070108-22070146)
chr8 (49-129)||(15081494-15081572)
chr8 (42-130)||(38082173-38082260)
chr8 (1-40)||(24642555-24642594)
chr8 (39-130)||(4360891-4360983)
chr8 (127-164)||(2609547-2609584)
chr8 (2-39)||(6094031-6094068)
chr8 (48-129)||(9295256-9295335)
chr8 (127-206)||(14130165-14130244)
chr8 (127-182)||(20693799-20693855)
chr8 (157-216)||(26378031-26378089)
chr8 (127-269)||(31072069-31072216)
chr8 (127-164)||(2689146-2689183)
chr8 (2-39)||(24636605-24636642)
[»] chr5 (17 HSPs)
chr5 (40-379)||(21848802-21849147)
chr5 (40-216)||(40778786-40778962)
chr5 (127-280)||(19497240-19497393)
chr5 (218-282)||(9868337-9868400)
chr5 (48-130)||(19677217-19677298)
chr5 (127-216)||(18252416-18252504)
chr5 (130-216)||(8456380-8456465)
chr5 (127-206)||(22440858-22440936)
chr5 (1-40)||(24695727-24695766)
chr5 (127-192)||(492567-492633)
chr5 (2-41)||(19707481-19707520)
chr5 (1-39)||(19714760-19714798)
chr5 (127-216)||(26140343-26140431)
chr5 (43-129)||(35160815-35160899)
chr5 (2-39)||(27347741-27347778)
chr5 (185-216)||(21844437-21844468)
chr5 (127-182)||(9868438-9868494)
[»] chr7 (49 HSPs)
chr7 (114-390)||(13885984-13886261)
chr7 (94-382)||(1220274-1220562)
chr7 (40-216)||(13882686-13882862)
chr7 (69-216)||(859156-859303)
chr7 (69-216)||(1217160-1217307)
chr7 (40-159)||(13886245-13886364)
chr7 (127-327)||(1883489-1883689)
chr7 (127-267)||(1365672-1365810)
chr7 (127-249)||(1874538-1874660)
chr7 (175-279)||(4300525-4300629)
chr7 (40-130)||(4303363-4303453)
chr7 (39-130)||(31577269-31577360)
chr7 (131-216)||(4888686-4888770)
chr7 (127-278)||(24840143-24840287)
chr7 (127-194)||(27309636-27309704)
chr7 (127-206)||(1786683-1786763)
chr7 (150-208)||(29175780-29175838)
chr7 (127-182)||(27142666-27142722)
chr7 (130-192)||(5934607-5934670)
chr7 (127-189)||(3778735-3778797)
chr7 (127-216)||(7803031-7803120)
chr7 (131-260)||(8916334-8916462)
chr7 (127-192)||(11000849-11000915)
chr7 (131-192)||(30217819-30217879)
chr7 (175-290)||(22572344-22572459)
chr7 (74-130)||(22572475-22572530)
chr7 (40-130)||(5678299-5678388)
chr7 (40-130)||(5703351-5703440)
chr7 (1-40)||(11543241-11543280)
chr7 (127-192)||(1369805-1369871)
chr7 (1-39)||(2653293-2653331)
chr7 (127-192)||(11228721-11228787)
chr7 (131-183)||(1753630-1753683)
chr7 (1-40)||(11536323-11536362)
chr7 (1-40)||(15152349-15152388)
chr7 (1-40)||(29327689-29327728)
chr7 (342-388)||(1883737-1883783)
chr7 (134-188)||(8063831-8063885)
chr7 (1-39)||(12738443-12738481)
chr7 (40-81)||(4300470-4300511)
chr7 (40-124)||(4668258-4668342)
chr7 (127-183)||(11228981-11229038)
chr7 (127-189)||(6451776-6451839)
chr7 (1-40)||(12750732-12750771)
chr7 (74-128)||(32052989-32053041)
chr7 (48-107)||(32936869-32936926)
chr7 (2-40)||(13392029-13392067)
chr7 (1-39)||(15148049-15148087)
chr7 (127-192)||(35814871-35814936)
[»] chr2 (31 HSPs)
chr2 (40-278)||(27956093-27956330)
chr2 (48-299)||(2155887-2156139)
chr2 (40-216)||(27952318-27952494)
chr2 (38-277)||(31634015-31634254)
chr2 (60-217)||(22011368-22011526)
chr2 (40-217)||(33655540-33655717)
chr2 (37-217)||(31636247-31636427)
chr2 (127-278)||(33051618-33051769)
chr2 (127-249)||(36647293-36647414)
chr2 (132-277)||(28737911-28738054)
chr2 (127-216)||(15129390-15129478)
chr2 (42-130)||(8781429-8781515)
chr2 (40-130)||(22264348-22264437)
chr2 (132-216)||(2165899-2165983)
chr2 (127-294)||(32163694-32163860)
chr2 (127-192)||(23457646-23457712)
chr2 (69-130)||(44675308-44675368)
chr2 (127-205)||(5171596-5171674)
chr2 (127-205)||(21772375-21772452)
chr2 (213-279)||(23456638-23456704)
chr2 (127-191)||(32161993-32162058)
chr2 (127-182)||(12966477-12966532)
chr2 (1-39)||(21330511-21330549)
chr2 (127-216)||(1518193-1518281)
chr2 (40-127)||(18725683-18725770)
chr2 (43-128)||(2165838-2165924)
chr2 (43-129)||(5841221-5841305)
chr2 (131-192)||(8294582-8294644)
chr2 (132-182)||(23456580-23456631)
chr2 (127-161)||(4184929-4184963)
chr2 (131-192)||(28737841-28737903)
[»] chr3 (45 HSPs)
chr3 (69-299)||(43306591-43306819)
chr3 (40-216)||(5128822-5128998)
chr3 (69-278)||(3068813-3069022)
chr3 (60-216)||(43303960-43304117)
chr3 (60-217)||(3063736-3063894)
chr3 (53-131)||(40593528-40593605)
chr3 (60-126)||(53012958-53013025)
chr3 (48-130)||(41218724-41218806)
chr3 (43-130)||(4580479-4580565)
chr3 (213-299)||(368791-368874)
chr3 (127-216)||(2472689-2472777)
chr3 (127-206)||(52708844-52708923)
chr3 (134-197)||(45168338-45168401)
chr3 (127-216)||(365593-365681)
chr3 (42-130)||(20398486-20398574)
chr3 (1-41)||(6109970-6110010)
chr3 (1-40)||(13211210-13211249)
chr3 (1-40)||(13248514-13248553)
chr3 (41-127)||(33620096-33620181)
chr3 (42-96)||(39913348-39913403)
chr3 (1-39)||(8490396-8490434)
chr3 (1-39)||(10579615-10579653)
chr3 (52-129)||(19949927-19950004)
chr3 (2-39)||(18641008-18641045)
chr3 (42-97)||(45168410-45168466)
chr3 (1-40)||(10572852-10572891)
chr3 (7-42)||(15607697-15607732)
chr3 (42-120)||(19795168-19795244)
chr3 (129-195)||(35908506-35908572)
chr3 (2-40)||(15351256-15351294)
chr3 (2-40)||(15357848-15357886)
chr3 (2-40)||(17781377-17781415)
chr3 (2-40)||(19090004-19090042)
chr3 (43-108)||(25857707-25857773)
chr3 (7-40)||(15601152-15601185)
chr3 (2-39)||(17136137-17136174)
chr3 (74-128)||(1151150-1151201)
chr3 (42-130)||(25340169-25340256)
chr3 (1-40)||(17200445-17200484)
chr3 (2-40)||(13516718-13516756)
chr3 (2-40)||(18510828-18510866)
chr3 (1-39)||(18519885-18519923)
chr3 (2-40)||(18522569-18522607)
chr3 (127-215)||(33175835-33175922)
chr3 (185-213)||(53013020-53013048)
[»] chr6 (35 HSPs)
chr6 (60-299)||(3535967-3536207)
chr6 (60-219)||(3542178-3542337)
chr6 (40-230)||(30049829-30050019)
chr6 (40-230)||(30052116-30052306)
chr6 (43-212)||(29340810-29340980)
chr6 (175-329)||(11190516-11190669)
chr6 (40-130)||(11190412-11190500)
chr6 (134-277)||(18718139-18718279)
chr6 (132-278)||(8048904-8049049)
chr6 (131-195)||(11658936-11659000)
chr6 (48-130)||(26571071-26571152)
chr6 (127-216)||(27822118-27822207)
chr6 (127-216)||(33615504-33615593)
chr6 (216-280)||(24443009-24443073)
chr6 (164-216)||(29342061-29342113)
chr6 (43-130)||(3565652-3565739)
chr6 (41-107)||(2339157-2339223)
chr6 (127-261)||(14238436-14238568)
chr6 (1-40)||(27381513-27381552)
chr6 (1-40)||(27471896-27471935)
chr6 (1-40)||(29308797-29308836)
chr6 (1-40)||(29315757-29315796)
chr6 (1-37)||(17691701-17691737)
chr6 (134-206)||(18727115-18727186)
chr6 (131-192)||(1127258-1127320)
chr6 (127-192)||(12882123-12882189)
chr6 (70-128)||(13645898-13645955)
chr6 (2-39)||(11651630-11651667)
chr6 (70-129)||(2939780-2939837)
chr6 (5-40)||(17684734-17684769)
chr6 (5-40)||(25537427-25537462)
chr6 (74-108)||(19232329-19232363)
chr6 (341-390)||(11190699-11190748)
chr6 (135-182)||(22873822-22873870)
chr6 (133-192)||(33215186-33215246)
[»] chr1 (33 HSPs)
chr1 (69-299)||(13443906-13444135)
chr1 (40-216)||(50857444-50857620)
chr1 (60-216)||(8931153-8931309)
chr1 (132-287)||(23987581-23987736)
chr1 (69-210)||(13441612-13441746)
chr1 (127-262)||(28660701-28660835)
chr1 (49-128)||(12486314-12486392)
chr1 (127-216)||(31915550-31915638)
chr1 (127-250)||(10925740-10925859)
chr1 (38-128)||(40804571-40804660)
chr1 (127-282)||(8967738-8967893)
chr1 (48-125)||(42071413-42071489)
chr1 (134-216)||(40058102-40058184)
chr1 (200-279)||(40804701-40804780)
chr1 (127-192)||(12944116-12944182)
chr1 (1-39)||(18251936-18251974)
chr1 (1-39)||(18532775-18532813)
chr1 (130-192)||(31913380-31913442)
chr1 (37-129)||(12033638-12033730)
chr1 (127-183)||(50713713-50713770)
chr1 (131-192)||(43681465-43681528)
chr1 (134-169)||(10927199-10927234)
chr1 (1-39)||(16359298-16359336)
chr1 (126-206)||(9031016-9031096)
chr1 (2-39)||(27310840-27310877)
chr1 (76-127)||(42646624-42646674)
chr1 (127-216)||(10928289-10928377)
chr1 (127-183)||(8221488-8221545)
chr1 (10-39)||(27131675-27131704)
chr1 (132-216)||(26981516-26981598)
chr1 (127-206)||(28661078-28661157)
chr1 (235-299)||(31913451-31913515)
chr1 (127-178)||(33152756-33152808)
[»] chr4 (46 HSPs)
chr4 (38-217)||(6659330-6659508)
chr4 (40-130)||(13085178-13085268)
chr4 (127-278)||(13991318-13991468)
chr4 (127-336)||(7723959-7724163)
chr4 (40-130)||(13086221-13086311)
chr4 (127-287)||(54700527-54700686)
chr4 (60-130)||(22716590-22716661)
chr4 (69-128)||(22691253-22691312)
chr4 (60-130)||(22988556-22988627)
chr4 (127-215)||(7723665-7723751)
chr4 (48-129)||(2053095-2053176)
chr4 (131-260)||(7634084-7634212)
chr4 (127-217)||(24667657-24667746)
chr4 (39-130)||(9596853-9596944)
chr4 (127-216)||(19935487-19935575)
chr4 (226-287)||(22691327-22691388)
chr4 (43-126)||(4053062-4053145)
chr4 (1-40)||(5713855-5713894)
chr4 (1-40)||(10621594-10621633)
chr4 (1-40)||(26963547-26963586)
chr4 (1-40)||(26970370-26970409)
chr4 (133-299)||(50515822-50515978)
chr4 (1-39)||(10628673-10628711)
chr4 (1-39)||(12357044-12357082)
chr4 (1-39)||(19927021-19927059)
chr4 (131-217)||(40206153-40206238)
chr4 (2-39)||(5707228-5707265)
chr4 (127-183)||(21433595-21433652)
chr4 (124-183)||(18689553-18689613)
chr4 (127-182)||(38888023-38888079)
chr4 (131-189)||(10494907-10494966)
chr4 (130-192)||(22486799-22486861)
chr4 (50-125)||(54239531-54239604)
chr4 (1-39)||(17142390-17142428)
chr4 (130-187)||(18657070-18657128)
chr4 (1-39)||(28393396-28393434)
chr4 (42-127)||(38223117-38223200)
chr4 (1-37)||(868507-868543)
chr4 (37-124)||(34949082-34949169)
chr4 (69-128)||(19684822-19684880)
chr4 (1-39)||(4426865-4426903)
chr4 (1-39)||(55612594-55612632)
chr4 (127-164)||(9260573-9260610)
chr4 (127-164)||(13990729-13990766)
chr4 (131-206)||(17254893-17254968)
chr4 (151-219)||(55139096-55139163)
[»] scaffold0110 (3 HSPs)
scaffold0110 (43-216)||(45262-45435)
scaffold0110 (143-236)||(46713-46806)
scaffold0110 (40-128)||(46792-46880)
[»] scaffold0240 (3 HSPs)
scaffold0240 (131-279)||(16051-16196)
scaffold0240 (130-270)||(14850-14988)
scaffold0240 (127-266)||(1658-1797)
[»] scaffold0531 (1 HSPs)
scaffold0531 (132-278)||(11527-11672)
[»] scaffold0090 (1 HSPs)
scaffold0090 (211-375)||(14920-15084)
[»] scaffold0054 (2 HSPs)
scaffold0054 (130-188)||(37714-37772)
scaffold0054 (127-180)||(49322-49375)
[»] scaffold0251 (2 HSPs)
scaffold0251 (40-129)||(8243-8331)
scaffold0251 (127-192)||(9702-9769)
[»] scaffold0330 (1 HSPs)
scaffold0330 (127-266)||(17640-17779)
[»] scaffold0433 (1 HSPs)
scaffold0433 (1-40)||(7014-7053)
[»] scaffold0326 (1 HSPs)
scaffold0326 (1-40)||(16522-16561)
[»] scaffold0234 (2 HSPs)
scaffold0234 (1-40)||(2582-2621)
scaffold0234 (1-40)||(11473-11512)
[»] scaffold0203 (1 HSPs)
scaffold0203 (1-40)||(23787-23826)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-40)||(8564-8603)
[»] scaffold0657 (1 HSPs)
scaffold0657 (1-39)||(901-939)
[»] scaffold0390 (2 HSPs)
scaffold0390 (2-40)||(7196-7234)
scaffold0390 (2-39)||(14212-14249)
[»] scaffold0220 (1 HSPs)
scaffold0220 (1-39)||(18196-18234)
[»] scaffold0767 (1 HSPs)
scaffold0767 (3-39)||(1-37)
[»] scaffold0186 (1 HSPs)
scaffold0186 (1-40)||(26248-26287)
[»] scaffold0705 (1 HSPs)
scaffold0705 (2-40)||(60-98)
[»] scaffold0024 (1 HSPs)
scaffold0024 (127-192)||(145734-145800)
[»] scaffold0236 (1 HSPs)
scaffold0236 (131-195)||(16402-16466)
[»] scaffold0154 (1 HSPs)
scaffold0154 (74-107)||(28711-28744)


Alignment Details
Target: chr8 (Bit Score: 271; Significance: 1e-151; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 42 - 388
Target Start/End: Complemental strand, 22512220 - 22511875
Alignment:
Q  42 tttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcaca 141  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22512220 ttttttattcaataaaattattcgagattttctctcaattctggtggatttcggaaacccttattttgataggtttgtcacttgcaaccctattttcaca 22512121  T
Q  142 agtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttctcct 241  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22512120 agtttgtcgcttgcaaacttgttcttttctacctaggtttagcgcttgctaaccctacacttccgtactgcgtcagttggtatcagagcaggtttctcct 22512021  T
Q  242 gttctttttctaacgtgatcagccatgggtgatcaaccggttacgagggcagaatttggcagtttaaatgcggccgccaaagctctgttagatcagtcga 341  Q
    |||||||| |||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |     
T  22512020 gttcttttcctaatg-gatcagccatgggagatcaaccggttacgagggcagaatttggcagtttaaatgcggccgccaaagctctgttagattagatgg 22511922  T
Q  342 cggcgttgacggctaagattgacaacatcaacaacaacaactgcaac 388  Q
     |||||| ||||||||||||||||||||||||| ||||||| |||||    
T  22511921 tggcgttaacggctaagattgacaacatcaacatcaacaaccgcaac 22511875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 93 - 388
Target Start/End: Complemental strand, 22519469 - 22519175
Alignment:
Q  93 cggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgcta 192  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  22519469 cggaaacccttattttgataggtttgtcacttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctacctaggtttagcgcttgcta 22519370  T
Q  193 accctacgcttccgtactgcgtcagttggtatcagagcaggtttctcctgttctttttctaacgtgatcagccatgggtgatcaaccggttacgagggca 292  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||| |||||||||||||||||||||    
T  22519369 accctacacttccgtactgcgtcagttggtatcagagcaggtttctcctgttcttttcctaatg-gatcagccatgggagatcaaccggttacgagggca 22519271  T
Q  293 gaatttggcagtttaaatgcggccgccaaagctctgttagatcagtcgacggcgttgacggctaagattgacaacatcaacaacaacaactgcaac 388  Q
    |||||||||||||||||||||||||||||||||||||||||| ||  |  |||||| ||||||||||||||||||||||||| ||||||| |||||    
T  22519270 gaatttggcagtttaaatgcggccgccaaagctctgttagattagatggtggcgttaacggctaagattgacaacatcaacatcaacaaccgcaac 22519175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 40 - 388
Target Start/End: Original strand, 37189780 - 37190127
Alignment:
Q  40 actttttgattcaataaaattattcgagattttctctcaatt-ctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttc 138  Q
    ||||||| ||||| ||| | ||||||||||||| |||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  37189780 acttttttattcattaataatattcgagatttt-tctcaatttctggtggatttcggaa-cccttattttgataggtttgtcgcttgcaaccctattttc 37189877  T
Q  139 acaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttct 238  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||| ||||||||||||||||| ||||||||||||||| |||||    
T  37189878 acaagtttgtcgcttgcaaacttattcttttctatctagttttagagcttgctaaccctaagcttccgtactgcgtcaattggtatcagagcagatttct 37189977  T
Q  239 cctgttctttttctaacgtgatcagccatgggtgatcaaccggttacgagggcagaatttggcagtttaaatgcggccgccaaagctctgttagatcagt 338  Q
     |||||||||| |||||||||||||||||||| ||||||||  ||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||     
T  37189978 tctgttcttttcctaacgtgatcagccatgggagatcaaccacttatgagggcaaaatttggcagtttaaatgcggccgccaaagctctcttagatcaga 37190077  T
Q  339 cgacggcgttgacggctaagattgacaacatcaacaacaacaactgcaac 388  Q
     |  |||||| ||| ||||||||||||||||||||| ||||||| |||||    
T  37190078 tggtggcgttaacgactaagattgacaacatcaacatcaacaaccgcaac 37190127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 40 - 299
Target Start/End: Complemental strand, 42891840 - 42891584
Alignment:
Q  40 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttca 139  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42891840 actttttgattcaataaaattatttgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttca 42891741  T
Q  140 caagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttctc 239  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||    
T  42891740 caagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctagccctacgcttccgtattgcgtcagttggtatcaaagcaggtttctc 42891641  T
Q  240 ctgttctttttctaacgtgatcagccatgggtgatcaaccggttacgagggcagaatttg 299  Q
    |  | ||||| |||||| ||||||||||||| ||||||| | | ||||||||||| ||||    
T  42891640 c--tacttttcctaacg-gatcagccatgggagatcaactgatgacgagggcagagtttg 42891584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 48 - 299
Target Start/End: Complemental strand, 22926816 - 22926564
Alignment:
Q  48 attcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttg 147  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22926816 attcaataaaaatattcgagattttctctcaattctggtggattccagaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttg 22926717  T
Q  148 tcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttctcctgttctt 247  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||    
T  22926716 tcgcttgcaaacttgttcttttctatctaggtttagcgctttctaaccctacgcttccgtactacgtcagttggcatcagagcaggtttcccctgttctt 22926617  T
Q  248 tttctaacgtgat-cagccatgggtgatcaaccggttacgagggcagaatttg 299  Q
    |    |||||||| ||||||| || ||||||||||| || |||||||||||||    
T  22926616 tcgtgaacgtgatccagccataggagatcaaccggtcactagggcagaatttg 22926564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 43 - 216
Target Start/End: Complemental strand, 22922023 - 22921850
Alignment:
Q  43 ttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaa 142  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22922023 ttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaa 22921924  T
Q  143 gtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22921923 gtttgtcgcttgcaaacttattcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtca 22921850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 40 - 299
Target Start/End: Original strand, 42890311 - 42890561
Alignment:
Q  40 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttca 139  Q
    |||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  42890311 actttttgattcaataaaattattcgagattttctct------tggtggattccggaaacccttattttgataggtttgtcgcttgcagccctattttca 42890404  T
Q  140 caagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttctc 239  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| |  | ||||||||||||||||||||||||||||||    
T  42890405 caagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgct-agcctacgctt-ctaattgcgtcagttggtatcagagcaggtttctc 42890502  T
Q  240 ctgttctttttctaacgtgatcagccatgggtgatcaaccggttacgagggcagaatttg 299  Q
    |||||||||| |||||  ||||||||||||| ||||||| | | ||||||||||| ||||    
T  42890503 ctgttcttttcctaac-agatcagccatgggagatcaactgatgacgagggcagagtttg 42890561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 48 - 216
Target Start/End: Complemental strand, 22520967 - 22520799
Alignment:
Q  48 attcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttg 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  22520967 attcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcacttgcaaccctattttcacaaatttg 22520868  T
Q  148 tcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    ||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||| || |||||||    
T  22520867 tcgcttgcaaacttgatcttttctacctaggtttagcgcttgctaaccctacgcttccttattgcgtca 22520799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 40 - 217
Target Start/End: Original strand, 6845249 - 6845426
Alignment:
Q  40 actttttgattcaataaaattattcgagattttctctcaattct-ggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttc 138  Q
    ||||||||||||| ||| | |||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6845249 actttttgattcattaataatattcgagattttctctcaatttttggtggattccg-aaacccttattttgataggtttgtcgcttgcaaccctattttc 6845347  T
Q  139 acaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcag 217  Q
    |||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6845348 acaagtttatcgcttgtaaacttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtcag 6845426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 60 - 208
Target Start/End: Original strand, 23570516 - 23570665
Alignment:
Q  60 tattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaa 158  Q
    ||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23570516 tattcgagacttttctctcaattctggtgcattctggaaacccttattttgataggtttgtcgcttgcaaccttattttcacaagtttgtcgcttgcaaa 23570615  T
Q  159 cttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgta 208  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23570616 cttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgta 23570665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 60 - 183
Target Start/End: Original strand, 23573515 - 23573639
Alignment:
Q  60 tattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaa 158  Q
    ||||||||| |||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  23573515 tattcgagacttttctctcaatttaggtggatttcggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgtaaa 23573614  T
Q  159 cttgttcttttctatctaggtttag 183  Q
    |||||| |||||||||||| |||||    
T  23573615 cttgttattttctatctagctttag 23573639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 127 - 249
Target Start/End: Complemental strand, 2189810 - 2189689
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatca 226  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||    
T  2189810 aaccttattttcacaagtttgtcgcttgcaaacttgttcttttcaatcgaggtttagcgcttgct-agcctacgcttccgtactgcgtcagttggtatca 2189712  T
Q  227 gagcaggtttctcctgttctttt 249  Q
    ||||| ||||||| |||||||||    
T  2189711 gagcatgtttctcatgttctttt 2189689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 18180859 - 18180770
Alignment:
Q  40 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaac 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18180859 actttttgattcaataaaattattcgagattttctctcaattctggtggattctggaaacccttattttgataggtttgtcgcttgcaac 18180770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 127 - 287
Target Start/End: Original strand, 2687742 - 2687901
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttctttt-ctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||  | | |||||||| ||||| |||| |||||||    
T  2687742 aaccctattttcacaagtttgtcgcttgcaaacttgttctttttctatctaggtttagcgctcgctagtctt-cgcttccg-actgcatcaggtggtatc 2687839  T
Q  226 agagcaggtttctcctgttctttttctaacgtgatcagccatgggtgatcaaccggttacga 287  Q
    ||||||||||||||||||||||||  ||||||||||| ||||||  ||||||| ||| ||||    
T  2687840 agagcaggtttctcctgttcttttcataacgtgatcaaccatggaagatcaactggtgacga 2687901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 127 - 278
Target Start/End: Original strand, 26374900 - 26375050
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatca 226  Q
    ||||||||||| ||||||||||||||||| |||||||||||||| ||||||| |||  |||||||| |  ||||||| | |||||| |||||||||||||    
T  26374900 aaccctatttttacaagtttgtcgcttgcgaacttgttcttttcaatctaggcttaacgcttgctagct-tacgctttcctactgcatcagttggtatca 26374998  T
Q  227 gagcaggtttctcctgttctttttctaacgtgatcagccatgggtgatcaac 278  Q
    ||||||||||||||| ||||||| ||||| |||||| ||||||| |||||||    
T  26374999 gagcaggtttctcctattcttttcctaacatgatcacccatgggagatcaac 26375050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 175 - 299
Target Start/End: Complemental strand, 18180753 - 18180630
Alignment:
Q  175 taggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttctcctgttctttttctaacgtgatcagccatgggtgat 274  Q
    ||||||||| |||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||| |||    
T  18180753 taggtttagcgcttgctagcc-tacgcttccgtactgcgtcagttggtatcaaagcaggtttctcctgttcttttcctaacatgatcagccatgggagat 18180655  T
Q  275 caaccggttacgagggcagaatttg 299  Q
    ||||   | ||||||||||| ||||    
T  18180654 caacttatgacgagggcagagtttg 18180630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 127 - 287
Target Start/End: Original strand, 16598249 - 16598409
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcta-tctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatc 225  Q
    ||||||||||||||||||||||||| ||||||||||||  |||||| |||| |||||| ||||||||||| |  ||||||||  | ||| |||||||||     
T  16598249 aaccctattttcacaagtttgtcgcgtgcaaacttgtttctttctaatctaagtttagcgcttgctaaccatt-gcttccgttttacgttagttggtatt 16598347  T
Q  226 agagcaggtttctcctgttctttttctaacgtgatcagccatgggtgatcaaccggttacga 287  Q
    |||| ||||||||||||| ||||| ||||| ||| || ||||||| ||||||||||| ||||    
T  16598348 agagtaggtttctcctgtccttttcctaacttgagcatccatgggagatcaaccggtgacga 16598409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 18468649 - 18468737
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||  ||||| |||||||||||    
T  18468649 aaccctattttcacaagtttgtcgcttgcaagcttgttcttttctacctaggtttagcgcttgctaaccct-tgcttctgtactgcgtca 18468737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 127 - 292
Target Start/End: Complemental strand, 24578866 - 24578702
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgtt-cttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatc 225  Q
    |||||||||||||||  |||  |||||||||||||||| |||||| |||||||||||| |||| ||||   |  ||||  ||  ||||||| ||||||||    
T  24578866 aaccctattttcacagatttaccgcttgcaaacttgtttcttttcgatctaggtttagcgctttctaattttt-gcttttgttttgcgtcaattggtatc 24578768  T
Q  226 agagcaggtttctcctgttctttttctaacgtgatcagccatgggtgatcaaccggttacgagggca 292  Q
    |||||||||||||||| ||| |||||  ||||||||||||||||  ||||||||| | |||||||||    
T  24578767 agagcaggtttctcctattc-ttttcgtacgtgatcagccatggaagatcaaccgatgacgagggca 24578702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 24731231 - 24731316
Alignment:
Q  131 ctattttcacaagtttgtcgcttgcaaacttgtt-cttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    |||||||||||||||||| ||||||||||||||| |||||| |||||||||||| ||||||| | |||||||| |||||||||||||    
T  24731231 ctattttcacaagtttgttgcttgcaaacttgttccttttcaatctaggtttagcgcttgct-agcctacgctcccgtactgcgtca 24731316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 26150602 - 26150669
Alignment:
Q  40 actttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttatt 106  Q
    ||||||| ||||||||||| ||||||||| |||||||||||||||||||||||| ||||| |||||||    
T  26150602 actttttcattcaataaaaatattcgagacttttctctcaattctggtggattctggaaatccttatt 26150669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 130 - 217
Target Start/End: Original strand, 24731035 - 24731122
Alignment:
Q  130 cctattttcacaagtttgtcgcttgcaaacttgtt-cttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcag 217  Q
    ||||||||||||||||||| ||||||||||||||| |||||| |||||  ||||| ||||||| | |||||| ||| ||||||||||||    
T  24731035 cctattttcacaagtttgttgcttgcaaacttgttccttttcaatctaaatttagcgcttgct-agcctacggttctgtactgcgtcag 24731122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 22171434 - 22171395
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22171434 ccaatcaatatagattggctattagggcttattccaacaa 22171395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 21940611 - 21940573
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaaca 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  21940611 ccaatcaatatagattggctattagggcttattccaaca 21940573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 22070146 - 22070108
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaaca 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22070146 ccaatcaatatagattggctattagggcttattccaaca 22070108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 49 - 129
Target Start/End: Original strand, 15081494 - 15081572
Alignment:
Q  49 ttcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaac 129  Q
    |||||||||||||| |||||  || |||||||||| |||||||| ||||||| |||||| || ||||||||||||||||||    
T  15081494 ttcaataaaattat-cgagaacttttctcaattcttgtggattctggaaacctttattt-gacaggtttgtcgcttgcaac 15081572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 130
Target Start/End: Complemental strand, 38082260 - 38082173
Alignment:
Q  42 tttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 130  Q
    ||||| ||||||||||| |  ||||||  || ||||||||||| | |||||| |||||||||| ||||||| |||||||||||||||||    
T  38082260 tttttcattcaataaaaattatcgagaacttttctcaattctgatagattcctgaaaccctta-tttgatatgtttgtcgcttgcaacc 38082173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 24642594 - 24642555
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  24642594 ccaatcaatatagattggctattagggcttactccaacaa 24642555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 4360983 - 4360891
Alignment:
Q  39 aactttttgattcaataaaattattcgaga--ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 130  Q
    |||||||| ||||||||||| |||||||||  |||| ||||||||  | |||||||  |||||| ||| ||| |||||||||||||||||||||    
T  4360983 aactttttcattcaataaaaatattcgagactttttttctcaatttcgatggattctagaaaccttta-tttaataggtttgtcgcttgcaacc 4360891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 164
Target Start/End: Complemental strand, 2609584 - 2609547
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgtt 164  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  2609584 aaccctattttcacaagtttgtcacttgcaaacttgtt 2609547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 6094068 - 6094031
Alignment:
Q  2 caatcaatatagattggctattagggcttattccaaca 39  Q
    |||||||||||||||||||||||||||||| |||||||    
T  6094068 caatcaatatagattggctattagggcttactccaaca 6094031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 9295256 - 9295335
Alignment:
Q  48 attcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaac 129  Q
    ||||||||||||||| |||||  || |||||||||||||||||||| ||||| | || ||||| || |||||||||||||||    
T  9295256 attcaataaaattat-cgagaacttttctcaattctggtggattccagaaactcata-tttgacagatttgtcgcttgcaac 9295335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 206
Target Start/End: Original strand, 14130165 - 14130244
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgt-tcttttctatctaggtttagtgcttgctaaccctacgcttccg 206  Q
    |||| ||||||||||| ||| |||||||||||||||| ||||||| |||||| ||||  |||||| || ||||||||||||    
T  14130165 aaccttattttcacaaatttatcgcttgcaaacttgtctcttttcgatctagatttaacgcttgc-aagcctacgcttccg 14130244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 20693799 - 20693855
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggttta 182  Q
    |||| ||||||||||| ||||||||||||||||||| || ||||| |||||||||||    
T  20693799 aaccatattttcacaaatttgtcgcttgcaaacttgtttattttcaatctaggttta 20693855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 26378031 - 26378089
Alignment:
Q  157 aacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    |||||||||||||| |||||| ||||| ||||||| | |||||||||||||||| |||||    
T  26378031 aacttgttcttttcaatctagatttagcgcttgct-agcctacgcttccgtactacgtca 26378089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 269
Target Start/End: Complemental strand, 31072216 - 31072069
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttctttt-------ctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagtt 219  Q
    ||||||||||||| |||||| || ||||||||||| || ||||       | |||||||||||| |||||||| || |||||||  | ||||||| ||||    
T  31072216 aaccctattttcataagtttatctcttgcaaacttttttttttaatttctcaatctaggtttagcgcttgctagcc-tacgcttttg-actgcgttagtt 31072119  T
Q  220 ggtatcagagcaggtttctcctgttctttttctaacgtgatcagccatgg 269  Q
     |||||||||||  ||||||  ||||||||  |||| |||||||||||||    
T  31072118 agtatcagagcaactttctctagttcttttcgtaacatgatcagccatgg 31072069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 164
Target Start/End: Original strand, 2689146 - 2689183
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgtt 164  Q
    |||||||||||||||  |||||||||||||||||||||    
T  2689146 aaccctattttcacagttttgtcgcttgcaaacttgtt 2689183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 24636642 - 24636605
Alignment:
Q  2 caatcaatatagattggctattagggcttattccaaca 39  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  24636642 caatcaatatagattggctattatggcttactccaaca 24636605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 231; Significance: 1e-127; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 40 - 379
Target Start/End: Complemental strand, 21849147 - 21848802
Alignment:
Q  40 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttatttt------gataggtttgtcgcttgcaacccta 133  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||      |||| ||||||||||||||||||||    
T  21849147 actttttgattcaataaaattattcgagattttctctcaattctagtggattccgaaaacacttatttttattttgataagtttgtcgcttgcaacccta 21849048  T
Q  134 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcagg 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21849047 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttggcgcttgctaaccctacgcttccgtactgcgtcggttggtatcagagcagg 21848948  T
Q  234 tttctcctgttctttttctaacgtgatcagccatgggtgatcaaccggttacgagggcagaatttggcagtttaaatgcggccgccaaagctctgttaga 333  Q
    ||||||||||| |||  |||||||||||||||||||| |||||||||||||||||| || |||||| | |||||||| ||||||||||||||||||||||    
T  21848947 tttctcctgttttttccctaacgtgatcagccatgggagatcaaccggttacgaggacataatttgacggtttaaatacggccgccaaagctctgttaga 21848848  T
Q  334 tcagtcgacggcgttgacggctaagattgacaacatcaacaacaac 379  Q
    |||   |  |||||||||||||||||| | ||||||||||||||||    
T  21848847 tcatatggtggcgttgacggctaagatcggcaacatcaacaacaac 21848802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 40 - 216
Target Start/End: Complemental strand, 40778962 - 40778786
Alignment:
Q  40 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttca 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  40778962 actttttgattcaataaaattattcgagattttctctcaattctggtggattccagaaacccttattttgataggtttgtcgcttgcaaccctattttta 40778863  T
Q  140 caagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  40778862 caagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgttaaccctgcgcttccgtactgcgtca 40778786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 127 - 280
Target Start/End: Complemental strand, 19497393 - 19497240
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctat-ctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatc 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| | | |||  ||||| ||||||||| |||   ||||||||| |||||||||| ||||    
T  19497393 aaccctattttcacaagtttgtcgcttgcaaacttgttctttttttttctacatttagcgcttgctaatcctta-cttccgtaccgcgtcagttgatatc 19497295  T
Q  226 agagcaggtttctcctgttctttttctaacgtgatcagccatgggtgatcaaccg 280  Q
    |||||||||||||||||||||||| |||||||||||  ||||||| |||||||||    
T  19497294 agagcaggtttctcctgttcttttcctaacgtgatccaccatgggagatcaaccg 19497240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 9868400 - 9868337
Alignment:
Q  218 ttggtatcagagcaggtttctcctgttctttttctaacgtgatcagccatgggtgatcaaccggt 282  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  9868400 ttggtatcagagcaggttt-tcctgttctttttctaacgtgatcagccatgggagatcaaccggt 9868337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 48 - 130
Target Start/End: Complemental strand, 19677298 - 19677217
Alignment:
Q  48 attcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 130  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||    
T  19677298 attcaataaaat-attcgagacttttctctcaattctggtggattccgaaaaccctta-tttgaaaggtttgtcgcttgcaacc 19677217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 18252416 - 18252504
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttct-tttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||  ||||| ||| ||||| |||||| |||||||||    
T  18252416 aaccctattttcacaggtttgtcgcttgcaaacttgttctatttctatctaggtttaacgcttg-taagcctacacttccg-actgcgtca 18252504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 130 - 216
Target Start/End: Complemental strand, 8456465 - 8456380
Alignment:
Q  130 cctattttcacaagtttgtcgcttgcaaacttgtt-cttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    |||||||| ||||||| ||||||||| |||||||| |||||| |||||||||||| ||||||| |||||||||||||| |||||||||    
T  8456465 cctatttttacaagttcgtcgcttgcgaacttgtttcttttcaatctaggtttagcgcttgct-accctacgcttccg-actgcgtca 8456380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 127 - 206
Target Start/End: Original strand, 22440858 - 22440936
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccg 206  Q
    ||||||||| ||| ||||||||||||||| ||| |||||||||||||||||||||||  |||||| | ||||||||||||    
T  22440858 aaccctattatcataagtttgtcgcttgcgaacatgttcttttctatctaggtttagcacttgct-agcctacgcttccg 22440936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 24695727 - 24695766
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  24695727 ccaatcaatatagattggctattagggcttattccaacaa 24695766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 492567 - 492633
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgcta 192  Q
    |||||||| ||||||||||||||||||||||||||| |||||||| |||||  ||||| ||||||||    
T  492567 aaccctatcttcacaagtttgtcgcttgcaaacttgtttcttttcaatctaaatttagcgcttgcta 492633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 19707481 - 19707520
Alignment:
Q  2 caatcaatatagattggctattagggcttattccaacaac 41  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  19707481 caatcaatatagattggctattagggcttactccaacaac 19707520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 19714760 - 19714798
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaaca 39  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  19714760 ccaatcaatatagattggctattagggcttactccaaca 19714798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 26140343 - 26140431
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttct-tttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    ||||||||||||| ||||||||||||||||| |||||| | |||| |||||| ||||| | ||||||| |||| ||||||| |||||||||    
T  26140343 aaccctattttcataagtttgtcgcttgcaatcttgttttctttcaatctagatttagcgtttgctaa-cctatgcttccg-actgcgtca 26140431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 129
Target Start/End: Complemental strand, 35160899 - 35160815
Alignment:
Q  43 ttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaac 129  Q
    |||| ||||||||||||||| |||||  || ||| |||||||||||| ||| |||||||||| ||||| |||||||||| |||||||    
T  35160899 ttttcattcaataaaattat-cgagaacttttcttaattctggtggaatcctgaaaccctta-tttgacaggtttgtcgtttgcaac 35160815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 27347741 - 27347778
Alignment:
Q  2 caatcaatatagattggctattagggcttattccaaca 39  Q
    |||||||||||||||||||||||||||||| |||||||    
T  27347741 caatcaatatagattggctattagggcttactccaaca 27347778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 216
Target Start/End: Complemental strand, 21844468 - 21844437
Alignment:
Q  185 gcttgctaaccctacgcttccgtactgcgtca 216  Q
    ||||||||||||||||||||||||||||||||    
T  21844468 gcttgctaaccctacgcttccgtactgcgtca 21844437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 9868494 - 9868438
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggttta 182  Q
    |||||||||||||||||||||| ||||| ||||||| |||||||| || ||| ||||    
T  9868494 aaccctattttcacaagtttgttgcttgtaaacttgtttcttttcaatatagattta 9868438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 226; Significance: 1e-124; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 114 - 390
Target Start/End: Complemental strand, 13886261 - 13885984
Alignment:
Q  114 gtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcg 213  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13886261 gtttgtcgcttgcaaacctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcg 13886162  T
Q  214 tcagttggtatcagagcaggtttctcctgttctttt-tctaacgtgatcagccatgggtgatcaaccggttacgagggcagaatttggcagtttaaatgc 312  Q
    ||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||    
T  13886161 tcagttggtattagagcaggtttctcctgttcttttccctaacgtgatcagccatgggagatcaaccgattacgagggcagagtttggcagtttaaatgc 13886062  T
Q  313 ggccgccaaagctctgttagatcagtcgacggcgttgacggctaagattgacaacatcaacaacaacaactgcaacta 390  Q
    ||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  13886061 ggccgccaaagctcttttagatcagttgacggcgttgacagctaagattgacaacatcaacaacaacaaccgcaacta 13885984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 94 - 382
Target Start/End: Complemental strand, 1220562 - 1220274
Alignment:
Q  94 ggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaa 193  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||| | |||||||    
T  1220562 ggaaacctctattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgtttgcaaacttgttcatttctatgtaggtttagcgtttgctaa 1220463  T
Q  194 ccctacgcttccgtactgcgtcagttggtatcagag-caggtttctcctgttctttttctaacgtgatcagccatgggtgatcaaccggttacgagggca 292  Q
    ||||||||||| ||||| ||| |||||||||||||| | |||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||| ||    
T  1220462 ccctacgcttctgtactacgttagttggtatcagagcctggtttctcctgttcttttcctaacg-gatcagccatgggagatcaaccggttacgaggaca 1220364  T
Q  293 gaatttggcagtttaaatgcggccgccaaagctctgttagatcagtcgacggcgttgacggctaagattgacaacatcaacaacaacaac 382  Q
    |||||||||||||||||| ||||||||||||||||||||||||||  |  | ||||| | |||||||| | |||||||||||||||||||    
T  1220363 gaatttggcagtttaaatacggccgccaaagctctgttagatcagatgctgacgttggcagctaagatcggcaacatcaacaacaacaac 1220274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 40 - 216
Target Start/End: Complemental strand, 13882862 - 13882686
Alignment:
Q  40 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttca 139  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13882862 actttttgattcaataaaattatttgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttca 13882763  T
Q  140 caagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13882762 caagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtca 13882686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 69 - 216
Target Start/End: Complemental strand, 859303 - 859156
Alignment:
Q  69 ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttt 168  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  859303 ttttctctcaattctggtggattccggaaacctttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttt 859204  T
Q  169 tctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    ||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  859203 tctatctaggtttagcgcttgctaatcctacgcttccgtattgcgtca 859156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 69 - 216
Target Start/End: Complemental strand, 1217307 - 1217160
Alignment:
Q  69 ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttt 168  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1217307 ttttctctcaattctggtggattccggaaacctttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttt 1217208  T
Q  169 tctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    ||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  1217207 tctatctaggtttagcgcttgctaatcctacgcttccgtattgcgtca 1217160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 40 - 159
Target Start/End: Complemental strand, 13886364 - 13886245
Alignment:
Q  40 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttca 139  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  13886364 actttttgattcaataaaatcattcgagattttctctcaattatggtggattctggaaacccttattttgataggtttgtcgcttgcaaacctattttca 13886265  T
Q  140 caagtttgtcgcttgcaaac 159  Q
    ||||||||||||||||||||    
T  13886264 caagtttgtcgcttgcaaac 13886245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 127 - 327
Target Start/End: Original strand, 1883489 - 1883689
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgtt-cttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatc 225  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||| |||||||||||||| |||||| |  ||||||| |||||| ||| ||||||| ||    
T  1883489 aaccttattttcacaagtttgtcgtttgcaaacttgtttcttttcaatctaggtttagtgtttgctagca-tacgcttacgtactacgttagttggtgtc 1883587  T
Q  226 agagcaggtttctcctgttctttttctaacgtgatcagccatgggtgatcaaccggttacgagggcagaatttggcagtttaaatgcggccgccaaagct 325  Q
    |||||  || |||||||||||||| ||||||||||||| |||||| |||||||||||||||| || |||||||  | |||||| ||||||||||||||||    
T  1883588 agagctcgtatctcctgttcttttcctaacgtgatcagtcatgggagatcaaccggttacgatggtagaatttcacggtttaattgcggccgccaaagct 1883687  T
Q  326 ct 327  Q
    ||    
T  1883688 ct 1883689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 127 - 267
Target Start/End: Original strand, 1365672 - 1365810
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatca 226  Q
    |||||||||||||||||||  |||||| ||||||||||| |||| |||||||||||| |||||||| || ||  ||||||||||  ||||||||||||||    
T  1365672 aaccctattttcacaagttcatcgcttacaaacttgttcctttcaatctaggtttagcgcttgctagcc-tatccttccgtacta-gtcagttggtatca 1365769  T
Q  227 gagcaggtttctcctgttctttttctaacgtgatcagccat 267  Q
    ||||||||||||||||||||||| ||||| |||||||||||    
T  1365770 gagcaggtttctcctgttcttttcctaacatgatcagccat 1365810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 127 - 249
Target Start/End: Original strand, 1874538 - 1874660
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgtt-cttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatc 225  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||| ||| |||||||||| ||||||||  |||||||||||||| ||||||||||||||    
T  1874538 aaccttattttcacaagtttgtcgtttgcaaacttgtttcttttcaatcaaggtttagtgtttgctaaca-tacgcttccgtactacgtcagttggtatc 1874636  T
Q  226 agagcaggtttctcctgttctttt 249  Q
     |||||||| ||||||||||||||    
T  1874637 ggagcaggtatctcctgttctttt 1874660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 175 - 279
Target Start/End: Original strand, 4300525 - 4300629
Alignment:
Q  175 taggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttctcctgttctttttctaacgtgatcagccatgggtgat 274  Q
    ||||||||| ||||||| | |||  ||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||| | |||    
T  4300525 taggtttagcgcttgcttaacctttgcttccgtactgcgtcagttggtatcagagcaggtttctccagttcttttcctaatgtgatcagccatgagagat 4300624  T
Q  275 caacc 279  Q
    |||||    
T  4300625 caacc 4300629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 4303363 - 4303453
Alignment:
Q  40 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttg-tcgcttgcaacc 130  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||| ||||||||| ||||||||||||    
T  4303363 actttttgattcaataaaattattcgagattttctctcaattctagtggattccgaaaaccctta-tttaataggtttgttcgcttgcaacc 4303453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 31577360 - 31577269
Alignment:
Q  39 aactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 130  Q
    |||||||| ||||||||||| ||||| ||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  31577360 aactttttcattcaataaaaatattcaagacttttctctcaattctggtggatttcggaaaccctta-tttgataggtttgtcgcttgcaacc 31577269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 4888770 - 4888686
Alignment:
Q  131 ctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| || || |||| | |||||||||||||| |||||||    
T  4888770 ctattttcacaggtttgtcgcttgcaaacttgttcttttctatctaggttcagcgcatgct-agcctacgcttccgtattgcgtca 4888686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 127 - 278
Target Start/End: Original strand, 24840143 - 24840287
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatc 225  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||  |||     |  |||| ||| || ||| ||||||||||||||    
T  24840143 aaccctattttcacaagtttgtcgcttgcaaacttgtttcttttcaatctaggttta--gct-----agtctacacttgcg-actacgtcagttggtatc 24840234  T
Q  226 agagcaggtttctcctgttctttttctaacgtgatcagccatgggtgatcaac 278  Q
    ||||| | |||||||| ||||||| ||||||||||| |||||| | |||||||    
T  24840235 agagcggatttctcctattcttttcctaacgtgatcggccatgagagatcaac 24840287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 127 - 194
Target Start/End: Complemental strand, 27309704 - 27309636
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgctaac 194  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||    
T  27309704 aaccctattttcacaagtttgtcgcttgcaaacttgtttcttttcaatctaggtttagcgcttgctaac 27309636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 127 - 206
Target Start/End: Original strand, 1786683 - 1786763
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgtt-cttttctatctaggtttagtgcttgctaaccctacgcttccg 206  Q
    |||||||||||| || ||||||||||||||||||||||  ||||||||||||||||||  |||||||| ||||||||||||    
T  1786683 aaccctattttcgcatgtttgtcgcttgcaaacttgttatttttctatctaggtttagcacttgctaatcctacgcttccg 1786763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 29175780 - 29175838
Alignment:
Q  150 gcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgta 208  Q
    |||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||    
T  29175780 gcttgcaaactttttcttttcaatctaggtttagcgcttgctaaccctacgcttccgta 29175838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 27142666 - 27142722
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggttta 182  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  27142666 aaccctattttcacaagtttgtcgcttgcaaacttgtttcttttcaatctaggttta 27142722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 5934607 - 5934670
Alignment:
Q  130 cctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgcta 192  Q
    ||||||||||||||||||||||||||||| ||| |||||||| |||||||||||| ||||||||    
T  5934607 cctattttcacaagtttgtcgcttgcaaatttgtttcttttcaatctaggtttagcgcttgcta 5934670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 189
Target Start/End: Complemental strand, 3778797 - 3778735
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttg 189  Q
    |||||||||||||||||||| |||||||||||||||||| |||| |||||  |||||||||||    
T  3778797 aaccctattttcacaagtttctcgcttgcaaacttgttcatttcaatctatatttagtgcttg 3778735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 7803120 - 7803031
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    |||| |||||||| |||||||| ||||||||||||| |||||||| | |||||||||   |||||||| ||||||||||||||||||||||    
T  7803120 aaccttattttcataagtttgttgcttgcaaacttgtttcttttcgacctaggtttaacccttgctaa-cctacgcttccgtactgcgtca 7803031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 260
Target Start/End: Complemental strand, 8916462 - 8916334
Alignment:
Q  131 ctattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagag 229  Q
    |||||| ||||||||| ||| |||||||||||||| ||||  |||||||||||  |||| ||| |  |||||||| | |||||||||||||||| |||||    
T  8916462 ctatttccacaagtttatcgtttgcaaacttgttcattttaaatctaggtttaacgcttactagca-tacgcttctg-actgcgtcagttggtaacagag 8916365  T
Q  230 caggtttctcctgttctttttctaacgtgat 260  Q
     ||||||||| ||||||||| ||||| ||||    
T  8916364 taggtttctcttgttcttttcctaacatgat 8916334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 11000915 - 11000849
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgcta 192  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| |||||||||||| ||||||||    
T  11000915 aaccctattttcactagtttgtcgcttgcgaacttgtttcttttcaatctaggtttagcgcttgcta 11000849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 30217819 - 30217879
Alignment:
Q  131 ctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgcta 192  Q
    ||||||||||||||||||||||||| ||||||||| |||| |||||||||||| ||||||||    
T  30217819 ctattttcacaagtttgtcgcttgcgaacttgttc-tttcaatctaggtttagcgcttgcta 30217879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 290
Target Start/End: Complemental strand, 22572459 - 22572344
Alignment:
Q  175 taggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttctcctgttctttttctaacgtga-tcagccatgggtga 273  Q
    ||||||||| ||||||||| |||  |||||||| ||||||||||||| ||||||||||||||| | |||||||||   ||||||| ||| ||||| | ||    
T  22572459 taggtttagcgcttgctaatcctt-gcttccgttctgcgtcagttggcatcagagcaggtttcccatgttcttttgtgaacgtgattcaaccatgagaga 22572361  T
Q  274 tcaaccggttacgaggg 290  Q
    |||||  ||||||||||    
T  22572360 tcaactagttacgaggg 22572344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 22572530 - 22572475
Alignment:
Q  74 tctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 130  Q
    |||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  22572530 tctcaattcttgtggattccggaaaccctta-tttgatagatttgtcgcttgcaacc 22572475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 5678388 - 5678299
Alignment:
Q  40 actttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 130  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||| | |  |  |||||||| |||||||||||||||||||| ||||    
T  5678388 actttttcattcaataaaattattcgagacttttctctcaattctggtgta-tatgtgaaccctta-tttgataggtttgtcgcttgtaacc 5678299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 5703440 - 5703351
Alignment:
Q  40 actttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 130  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||| | |  |  |||||||| |||||||||||||||||||| ||||    
T  5703440 actttttcattcaataaaattattcgagacttttctctcaattctggtgta-tatgtgaaccctta-tttgataggtttgtcgcttgtaacc 5703351  T

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Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 11543241 - 11543280
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11543241 ccaatcaatatagattggctattagggcttattccaacaa 11543280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 1369805 - 1369871
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgcta 192  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||| |||||||||||  ||||||||    
T  1369805 aaccctattttaacaagtttatcgcttgcaaacttgtttcttttcaatctaggtttaacgcttgcta 1369871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 2653293 - 2653331
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaaca 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2653293 ccaatcaatatagattggctattagggcttattccaaca 2653331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 11228721 - 11228787
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgcta 192  Q
    |||||||||| |||||||||||||||| |||||||| ||||||| |||| |||||||||| ||||||    
T  11228721 aaccctatttccacaagtttgtcgcttccaaacttgtttcttttttatcaaggtttagtgtttgcta 11228787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 1753683 - 1753630
Alignment:
Q  131 ctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttag 183  Q
    |||||||||||||||||||||||||||||||| |||||||| || |||||||||    
T  1753683 ctattttcacaagtttgtcgcttgcaaacttgtttcttttcaatttaggtttag 1753630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 11536323 - 11536362
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaacaa 40  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  11536323 ccaatcaatatagagtggctattagggcttattccaacaa 11536362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 15152388 - 15152349
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  15152388 ccaatcaatatagattggctattagggcttactccaacaa 15152349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 29327728 - 29327689
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  29327728 ccaatcaatatagattggctattagggcttactccaacaa 29327689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 342 - 388
Target Start/End: Original strand, 1883737 - 1883783
Alignment:
Q  342 cggcgttgacggctaagattgacaacatcaacaacaacaactgcaac 388  Q
    |||||||||| |||||||| ||||||||||||||||||||| |||||    
T  1883737 cggcgttgacagctaagatcgacaacatcaacaacaacaaccgcaac 1883783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 188
Target Start/End: Complemental strand, 8063885 - 8063831
Alignment:
Q  134 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgctt 188  Q
    ||||||||| ||| ||||||||||||||||||||||| |||||| | ||||||||    
T  8063885 ttttcacaaatttatcgcttgcaaacttgttcttttcaatctagatctagtgctt 8063831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 12738481 - 12738443
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaaca 39  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  12738481 ccaatcaatatagattggctattagggcttactccaaca 12738443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 4300470 - 4300511
Alignment:
Q  40 actttttgattcaataaaattattcgagattttctctcaatt 81  Q
    ||||||||||||||| |||||||| |||||||||||||||||    
T  4300470 actttttgattcaatcaaattatttgagattttctctcaatt 4300511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 4668342 - 4668258
Alignment:
Q  40 actttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgctt 124  Q
    ||||||| ||| || |||| ||||||||| |||||||| ||||| ||||||||  ||||||||||| ||| |||||||||||||||    
T  4668342 actttttcattgaaaaaaaatattcgagacttttctcttaattcaggtggattatggaaaccctta-tttaataggtttgtcgctt 4668258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 11228981 - 11229038
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaggtttag 183  Q
    |||||| |||||||| ||||||||| ||||||||||||| ||||| ||||||||||||    
T  11228981 aacccttttttcacacgtttgtcgcctgcaaacttgttctttttcaatctaggtttag 11229038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 189
Target Start/End: Complemental strand, 6451839 - 6451776
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttg 189  Q
    |||| |||||||||| |||||||||||||||||||| ||| |||| |||||| ||||| |||||    
T  6451839 aaccttattttcacaggtttgtcgcttgcaaacttgtttcctttcaatctagatttagcgcttg 6451776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 12750771 - 12750732
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaacaa 40  Q
    |||||||||||||||| |||||||||||||| ||||||||    
T  12750771 ccaatcaatatagattagctattagggcttactccaacaa 12750732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 32052989 - 32053041
Alignment:
Q  74 tctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaa 128  Q
    |||||||||||||||||| ||||||||||  |||||| || ||||||||||||||    
T  32052989 tctcaattctggtggatttcggaaaccct--ttttgacagatttgtcgcttgcaa 32053041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 32936926 - 32936869
Alignment:
Q  48 attcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattt 107  Q
    ||||||||||||||| ||||| ||| |||||||| |||||||||||| ||||||||||||    
T  32936926 attcaataaaattat-cgagaattt-tctcaattatggtggattccgaaaacccttattt 32936869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 13392067 - 13392029
Alignment:
Q  2 caatcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  13392067 caatcaatatagattggatattagggcttactccaacaa 13392029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 15148087 - 15148049
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaaca 39  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  15148087 ccaattaatatagattggctattagggcttactccaaca 15148049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 35814871 - 35814936
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgcta 192  Q
    |||| |||||| |||||||||||||||||||| ||| |  |||| |||||| ||||||| ||||||    
T  35814871 aaccttatttttacaagtttgtcgcttgcaaagttggttctttcaatctagatttagtgtttgcta 35814936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 207; Significance: 1e-113; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 40 - 278
Target Start/End: Complemental strand, 27956330 - 27956093
Alignment:
Q  40 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttca 139  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27956330 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttcataggtttgtcgcttgcaaccctattttca 27956231  T
Q  140 caagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttctc 239  Q
     | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27956230 taggtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttctc 27956131  T
Q  240 ctgttctttttctaacgtgatcagccatgggtgatcaac 278  Q
    |||||||||| |||||| ||||||||||||| |||||||    
T  27956130 ctgttcttttcctaacg-gatcagccatgggagatcaac 27956093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 48 - 299
Target Start/End: Original strand, 2155887 - 2156139
Alignment:
Q  48 attcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagttt 146  Q
    ||||||||| | ||||| ||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2155887 attcaataataatattcaagacttttctctcaattctgatggattccgaaaacccttattttgataggtttgtcgcttgcaatcctattttcacaagttt 2155986  T
Q  147 gtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttctcctgttct 246  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  2155987 gtcgctcgcaaacttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtcagttggcatcagagcaggtttcccctgttct 2156086  T
Q  247 ttttctaacgtgat-cagccatgggtgatcaaccggttacgagggcagaatttg 299  Q
    ||    |||||||| |||||||||| |||||| ||||||| |||||||||||||    
T  2156087 ttcgtgaacgtgatccagccatgggagatcaa-cggttactagggcagaatttg 2156139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 40 - 216
Target Start/End: Complemental strand, 27952494 - 27952318
Alignment:
Q  40 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttca 139  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  27952494 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttcaaaggtttgtcgcttgcaaccctattttca 27952395  T
Q  140 caagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27952394 caagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtca 27952318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 38 - 277
Target Start/End: Original strand, 31634015 - 31634254
Alignment:
Q  38 caactttttgattcaataaaattattcgagattttctctcaatt-ctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattt 136  Q
    ||||||||| ||||| ||| | |||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  31634015 caacttttttattcattaataatatttgagattttctctcaatttctggtggattccg-aaacccttattttgataggtttgtcgcttgcaatcctattt 31634113  T
Q  137 tcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggttt 236  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31634114 tcacaagtttgtcgctagcaaacttgttcttttctatctaggtttagcgtttgctaaccctacgcttccgtactgcgtcagttggtatcatagcaggttt 31634213  T
Q  237 ctcctgttctttttctaacgtgatcagccatgggtgatcaa 277  Q
    ||||||||||||| ||| | |||||| | ||||| ||||||    
T  31634214 ctcctgttcttttcctagcatgatcaactatgggagatcaa 31634254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 60 - 217
Target Start/End: Original strand, 22011368 - 22011526
Alignment:
Q  60 tattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaa 158  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  22011368 tattcgagacttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttccaaccctattttcacaagtttgtcacttgcaaa 22011467  T
Q  159 cttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcag 217  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22011468 cttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtcag 22011526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 40 - 217
Target Start/End: Original strand, 33655540 - 33655717
Alignment:
Q  40 actttttgattcaataaaattattcgagattttctctcaatt-ctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttc 138  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33655540 actttttcattcaataaaattattcgagattttctctcaatttctggtggattccggaaacccttattttgataggtttgtcgtttgcaaccctattttc 33655639  T
Q  139 acaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcag 217  Q
    |||||||||||||||||||||||||  |||||||||||||||||| ||||||||| ||||| |||||||||||||||||    
T  33655640 acaagtttgtcgcttgcaaacttgtatttttctatctaggtttagcgcttgctaa-cctacacttccgtactgcgtcag 33655717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 37 - 217
Target Start/End: Original strand, 31636247 - 31636427
Alignment:
Q  37 acaactttttgattcaataaaattattcgagattttctctcaatt-ctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctatt 135  Q
    |||||||||| ||||| ||| | ||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  31636247 acaacttttttattcattaataatattcaagattttctctcaatttctggtggattccggaa-cccttattttgataggtttgtcgcttgcaaccatatt 31636345  T
Q  136 ttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcag 217  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31636346 ttcacaagtttgtcgcttgcaaactagttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtcag 31636427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 127 - 278
Target Start/End: Original strand, 33051618 - 33051769
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttctttt-ctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatc 225  Q
    ||||||||||||| ||||||||||||||||||||||||||||| | || ||||||||| |||||||| || || ||||||||||| ||||||||||||||    
T  33051618 aaccctattttcaaaagtttgtcgcttgcaaacttgttctttttcaatttaggtttagcgcttgctagcc-taagcttccgtactacgtcagttggtatc 33051716  T
Q  226 agagcaggtttctcctgttctttttctaacgtgatcagccatgggtgatcaac 278  Q
    |||||||||||||||||||||||| |||||||||||||||||| | |||||||    
T  33051717 agagcaggtttctcctgttcttttcctaacgtgatcagccatgagagatcaac 33051769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 127 - 249
Target Start/End: Original strand, 36647293 - 36647414
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatca 226  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||    
T  36647293 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcgaggtttagcgcttgct-agcctacgcttccgtactgcgtcagttggtatca 36647391  T
Q  227 gagcaggtttctcctgttctttt 249  Q
    ||||| ||||||| |||||||||    
T  36647392 gagcatgtttctcatgttctttt 36647414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 132 - 277
Target Start/End: Original strand, 28737911 - 28738054
Alignment:
Q  132 tattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagca 231  Q
    |||||||| |||||||||||||||||||||| ||||||| ||||||||||||  |||||||  | |||||||||| ||||||||||||||||||||||||    
T  28737911 tattttcaaaagtttgtcgcttgcaaacttgctcttttcaatctaggtttagcacttgctagac-tacgcttccg-actgcgtcagttggtatcagagca 28738008  T
Q  232 ggtttctcctgttctttttctaacgtgatcagccatgggtgatcaa 277  Q
    | |||||| ||| ||||| ||||| |||||||||||||| ||||||    
T  28738009 gatttctcttgtgcttttcctaacatgatcagccatgggagatcaa 28738054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 15129390 - 15129478
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| | |||||||||||||||| |||||    
T  15129390 aaccctattttcacaagtttgtcgcttgcgaacttgttcttttctatctaggtttagcgcttgct-agcctacgcttccgtactacgtca 15129478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 42 - 130
Target Start/End: Original strand, 8781429 - 8781515
Alignment:
Q  42 tttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 130  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||    
T  8781429 tttttcattcaataaaattattcgagatttactctcaattctggtggatttc-gaaaccctta-tttgataggtttgtcgcttgcaacc 8781515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 22264348 - 22264437
Alignment:
Q  40 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 130  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||  |||||| ||| || |||||||||||| |||||||||    
T  22264348 actttttgattcaataaaattattcgagattttatctcaattctgatggattctagaaaccttta-ttcgataggtttgtctcttgcaacc 22264437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 2165899 - 2165983
Alignment:
Q  132 tattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    |||||| | |||||||| |||||||||||||||||||||||||||||||||  ||||| ||||||||||||  ||||||||||||    
T  2165899 tattttgataagtttgttgcttgcaaacttgttcttttctatctaggtttaacgcttgttaaccctacgctgtcgtactgcgtca 2165983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 127 - 294
Target Start/End: Complemental strand, 32163860 - 32163694
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgtt-cttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatc 225  Q
    |||| |||||||||||||||| ||||| ||||||| || |||||| |||||||||||  |||| ||| || | |||||| | |||||||||||||||||     
T  32163860 aaccatattttcacaagtttgacgcttacaaacttatttcttttcaatctaggtttaacgctttctagcctt-cgcttctg-actgcgtcagttggtatt 32163763  T
Q  226 agagcaggtttctcctgttctttttctaacgtgatcagccatgggtgatcaaccggttacgagggcaga 294  Q
    ||||||  ||||| || ||||||| |||||||||||| ||||||| |||||||   | |||||||||||    
T  32163762 agagcatatttcttctattcttttcctaacgtgatcaaccatgggagatcaacttataacgagggcaga 32163694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 23457646 - 23457712
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgcta 192  Q
    |||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||    
T  23457646 aaccctattttcacaagtttgtcgcttgcaaacttgtttattttcaatctaggtttagcgcttgcta 23457712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 44675368 - 44675308
Alignment:
Q  69 ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 130  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||    
T  44675368 ttttctctcaattctggtggattccgaaaaccctta-tttgataggtatgtcgcttgcaacc 44675308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 5171674 - 5171596
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgt-tcttttctatctaggtttagtgcttgctaaccctacgcttcc 205  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||| |||||| ||||| ||||| ||| |||||||||||    
T  5171674 aaccctatttttacaagtttgtcgcttgcaaacttgtctcttttcaatctagatttagcgcttgttaa-cctacgcttcc 5171596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 21772375 - 21772452
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttcc 205  Q
    ||||||||||||| |||||||||||||||||||||||| ||||| ||||| |||||| | | ||||| |||||||||||    
T  21772375 aaccctattttcataagtttgtcgcttgcaaacttgtttttttcaatctaagtttagcgttggctaa-cctacgcttcc 21772452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 279
Target Start/End: Original strand, 23456638 - 23456704
Alignment:
Q  213 gtcagttggtatcagagcaggtttctcctgttctttttctaacgtgatcagccatgggtgatcaacc 279  Q
    ||||||||||||||||||| ||||||  ||||||||| |||||||||||||||||| | ||||||||    
T  23456638 gtcagttggtatcagagcaagtttcttttgttcttttcctaacgtgatcagccatgagagatcaacc 23456704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 32162058 - 32161993
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgct 191  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||  |||||||    
T  32162058 aaccctattttcacaagtttgtcacttgcaaacttgtttcttttcgatctaggtttaacgcttgct 32161993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 12966477 - 12966532
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggttta 182  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| |||||| ||||    
T  12966477 aaccctattttcacaagttcgtcgcttgcgaacttgttcttttcaatctagattta 12966532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 21330511 - 21330549
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaaca 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  21330511 ccaatcaatatagattggctattagggcttattccaaca 21330549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 1518193 - 1518281
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    ||||||||||||| ||||| ||||||||| ||||||| | |||| ||||||||| || ||||||||    ||||||||||||||||||||    
T  1518193 aaccctattttcataagttcgtcgcttgcgaacttgtccctttcaatctaggttaagcgcttgctagga-tacgcttccgtactgcgtca 1518281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 40 - 127
Target Start/End: Complemental strand, 18725770 - 18725683
Alignment:
Q  40 actttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgca 127  Q
    ||||||| |||||||||||||||| || | |||||||| |||| | ||||| ||| |||||| |||||| |||||||||||||||||||    
T  18725770 actttttcattcaataaaattatttgaaacttttctcttaattttagtggaatccagaaacctttattt-gataggtttgtcgcttgca 18725683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 128
Target Start/End: Original strand, 2165838 - 2165924
Alignment:
Q  43 ttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaa 128  Q
    |||| ||||| ||| | ||||||||| ||||||||||||| |||||||||| | ||||  ||||||||||| |||||| ||||||||    
T  2165838 tttttattcattaataatattcgagacttttctctcaattttggtggattctgaaaacatttattttgataagtttgttgcttgcaa 2165924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 129
Target Start/End: Original strand, 5841221 - 5841305
Alignment:
Q  43 ttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaac 129  Q
    |||| ||||||||||||||| |||||  || |||||||||| |||||||||| |||||| | ||| || ||||||||||||||||||    
T  5841221 ttttcattcaataaaattat-cgagaacttttctcaattcttgtggattccgaaaacccctgttt-gacaggtttgtcgcttgcaac 5841305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 8294582 - 8294644
Alignment:
Q  131 ctattttcacaagtttgtcgcttgcaaacttgttctt-ttctatctaggtttagtgcttgcta 192  Q
    ||||||| ||||||||||||||||||||| ||||||| ||||||||| ||||||  |||||||    
T  8294582 ctatttttacaagtttgtcgcttgcaaacgtgttcttcttctatctaagtttagcacttgcta 8294644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 23456580 - 23456631
Alignment:
Q  132 tattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggttta 182  Q
    |||||||| |||||||||||||||||||||| |||||||| || ||||||||    
T  23456580 tattttcaaaagtttgtcgcttgcaaacttgtttcttttcaatataggttta 23456631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 4184929 - 4184963
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaactt 161  Q
    ||||||||||||||||||||||||||||| |||||    
T  4184929 aaccctattttcacaagtttgtcgcttgcgaactt 4184963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 28737841 - 28737903
Alignment:
Q  131 ctattttcacaagttt-gtcgcttgcaaacttgttcttttctatctaggtttagtgcttgcta 192  Q
    |||||||||||||||| ||| |||||||||||  ||||||| || ||||||||| ||||||||    
T  28737841 ctattttcacaagttttgtctcttgcaaacttactcttttcaatttaggtttagcgcttgcta 28737903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 183; Significance: 7e-99; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 69 - 299
Target Start/End: Complemental strand, 43306819 - 43306591
Alignment:
Q  69 ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttt 168  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  43306819 ttttctctcaattctggtggattacggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgttgcttgcaaacttgttcttt 43306720  T
Q  169 tctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttctcctgttctttttctaacgtgatcagccatg 268  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  43306719 tctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttctcctgttcttttcctaacg-gatcagccatg 43306621  T
Q  269 ggtgatcaaccggttacgagggcagaatttg 299  Q
    || |||||| | || ||||||||||| ||||    
T  43306620 ggagatcaa-ctgtgacgagggcagagtttg 43306591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 40 - 216
Target Start/End: Original strand, 5128822 - 5128998
Alignment:
Q  40 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttca 139  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5128822 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttca 5128921  T
Q  140 caagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||    
T  5128922 caagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcctgctaaccctacgcttctgtactgcgtca 5128998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 69 - 278
Target Start/End: Complemental strand, 3069022 - 3068813
Alignment:
Q  69 ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttt 168  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |  ||||||||||||||||||    
T  3069022 ttttctctcaattttggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctatttttacaagttttttccttgcaaacttgttcttt 3068923  T
Q  169 tctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttctcctgttctttttctaacgtgatcagccatg 268  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||| || ||||| |||| |||||||    
T  3068922 tctatctaggtttagcgcttgctaaccatacgcttccgtactgcgtcagttggtattagagcatgtttctcctgttctcttcctaacatgataagccatg 3068823  T
Q  269 ggtgatcaac 278  Q
    || |||||||    
T  3068822 ggagatcaac 3068813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 60 - 216
Target Start/End: Complemental strand, 43304117 - 43303960
Alignment:
Q  60 tattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaa 158  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  43304117 tattcgagacttttctctcaattctggtggatttcggaaacccttattttaataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaa 43304018  T
Q  159 cttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  43304017 cttgttcttttctatctaggtttagcgcttgctaaccttacgcttccgtactgcgtca 43303960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 60 - 217
Target Start/End: Complemental strand, 3063894 - 3063736
Alignment:
Q  60 tattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaa 158  Q
    ||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3063894 tattcgagacttttctctcaattctggttgattccgaaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaa 3063795  T
Q  159 cttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcag 217  Q
    ||  ||||||||||||||||||||  ||||||||||||||||||| |||||||||||||    
T  3063794 ctctttcttttctatctaggtttaacgcttgctaaccctacgctttcgtactgcgtcag 3063736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 53 - 131
Target Start/End: Complemental strand, 40593605 - 40593528
Alignment:
Q  53 ataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccc 131  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  40593605 ataaaattattcgagattttctctcaattttggtggattccgaaaaccctta-tttgataggtttgtcgcttgcaaccc 40593528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 126
Target Start/End: Original strand, 53012958 - 53013025
Alignment:
Q  60 tattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgc 126  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53012958 tattcgagacttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgc 53013025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 48 - 130
Target Start/End: Original strand, 41218724 - 41218806
Alignment:
Q  48 attcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 130  Q
    ||||||||| | ||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||    
T  41218724 attcaataataatattcgagacttttctctcaattctggtggattccggaaagcctta-tttgataggtttgtcgcttacaacc 41218806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 4580479 - 4580565
Alignment:
Q  43 ttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 130  Q
    |||| |||||||||||| |||||||| ||||||||||||||| |||||||| | ||||||||| |||||||||||||||||||||||||    
T  4580479 ttttcattcaataaaat-attcgagaattttctctcaattctagtggattctgaaaaccctta-tttgataggtttgtcgcttgcaacc 4580565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 213 - 299
Target Start/End: Complemental strand, 368874 - 368791
Alignment:
Q  213 gtcagttggtatcagagcaggtttctcctgttctttttctaacgtgatcagccatgggtgatcaaccggttacgagggcagaatttg 299  Q
    |||||||| ||||||||||||||||||||  ||||||||||||| ||||||||||||| ||||||||| | ||||||||||| ||||    
T  368874 gtcagttgttatcagagcaggtttctcct--tctttttctaacg-gatcagccatgggagatcaaccgatgacgagggcagagtttg 368791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 2472777 - 2472689
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    |||||||||||||||||||||||| ||||||||||||   |||| || ||||||||| ||||||| | ||||||||| ||||||||||||    
T  2472777 aaccctattttcacaagtttgtcggttgcaaacttgtctctttcaatttaggtttagcgcttgct-agcctacgctttcgtactgcgtca 2472689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 206
Target Start/End: Original strand, 52708844 - 52708923
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaggtttagtgcttgctaaccctacgcttccg 206  Q
    ||||||| |||||||||||| ||||||||||| |||||| |||||||||||||||||| ||||| ||| ||||||||||||    
T  52708844 aaccctactttcacaagtttatcgcttgcaaatttgttctttttctatctaggtttagcgcttgttaa-cctacgcttccg 52708923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 134 - 197
Target Start/End: Complemental strand, 45168401 - 45168338
Alignment:
Q  134 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccct 197  Q
    |||||||||||||||||||||||||||||||  |||| ||||||||||||  ||||||||||||    
T  45168401 ttttcacaagtttgtcgcttgcaaacttgtttatttcaatctaggtttagcacttgctaaccct 45168338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 365681 - 365593
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    ||||||||||||||||||||||||||||  || ||||| |||||| | ||||||||| | ||||| | |||||||||||||| |||||||    
T  365681 aaccctattttcacaagtttgtcgcttgggaatttgttattttctttttaggtttagcgtttgct-agcctacgcttccgtaatgcgtca 365593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 42 - 130
Target Start/End: Complemental strand, 20398574 - 20398486
Alignment:
Q  42 tttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 130  Q
    ||||| ||| || |||| ||||||||| |||| ||||||||||||||||||||| ||||||||| ||||||||  |||||||||||||||    
T  20398574 ttttttatttaagaaaaatattcgagacttttttctcaattctggtggattccgaaaaccctta-tttgatagacttgtcgcttgcaacc 20398486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6110010 - 6109970
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaacaac 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  6110010 ccaatcaatatagattggctattagggcttattccaacaac 6109970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 13211249 - 13211210
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13211249 ccaatcaatatagattggctattagggcttattccaacaa 13211210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 13248553 - 13248514
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13248553 ccaatcaatatagattggctattagggcttattccaacaa 13248514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 127
Target Start/End: Complemental strand, 33620181 - 33620096
Alignment:
Q  41 ctttttgattcaataaaattattcgagatttt-ctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgca 127  Q
    |||||| ||||||||||| ||| ||||||||| ||||||||||||| |||||| ||||||||||| ||||||||||||  ||||||||    
T  33620181 ctttttaattcaataaaaatat-cgagatttttctctcaattctggaggattctggaaaccctta-tttgataggttttgcgcttgca 33620096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 39913403 - 39913348
Alignment:
Q  42 tttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccgga 96  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||    
T  39913403 tttttgattcaataaaaatattcgagacttttctcccaattctggtggattccgga 39913348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 8490434 - 8490396
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaaca 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8490434 ccaatcaatatagattggctattagggcttattccaaca 8490396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 10579615 - 10579653
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaaca 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10579615 ccaatcaatatagattggctattagggcttattccaaca 10579653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 129
Target Start/End: Original strand, 19949927 - 19950004
Alignment:
Q  52 aataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaac 129  Q
    ||||||| |||| |||| |||||||||||||||| ||||||||  ||||||||| ||||||| ||||||||||||||||    
T  19949927 aataaaaatattagagacttttctctcaattctgatggattccaaaaaccctta-tttgataagtttgtcgcttgcaac 19950004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 18641008 - 18641045
Alignment:
Q  2 caatcaatatagattggctattagggcttattccaaca 39  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18641008 caatcaatatagattggctattagggcttattccaaca 18641045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 45168466 - 45168410
Alignment:
Q  42 tttttgattcaataaaattattcgagattttctctcaa-ttctggtggattccggaa 97  Q
    ||||| |||||||||||||||||||||||||||||||| |||| |||||||| ||||    
T  45168466 ttttttattcaataaaattattcgagattttctctcaatttcttgtggattctggaa 45168410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 10572852 - 10572891
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  10572852 ccaatcaatataggttggctattagggcttattccaacaa 10572891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 42
Target Start/End: Original strand, 15607697 - 15607732
Alignment:
Q  7 aatatagattggctattagggcttattccaacaact 42  Q
    ||||||||||||||||||||||||||||||||||||    
T  15607697 aatatagattggctattagggcttattccaacaact 15607732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 120
Target Start/End: Original strand, 19795168 - 19795244
Alignment:
Q  42 tttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtc 120  Q
    ||||| ||||||||||||||||| ||||||||||| |||| ||||||||| || ||  ||||||||  |||||||||||    
T  19795168 ttttttattcaataaaattattccagattttctctaaattttggtggatttcgtaa--ccttatttgcataggtttgtc 19795244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 195
Target Start/End: Complemental strand, 35908572 - 35908506
Alignment:
Q  129 ccctattttcacaagtttgtcgcttgcaaactt-gttcttttctatctaggtttagtgcttgctaacc 195  Q
    ||||||||| |||||||||||| ||||||| || ||||||| |||||||||||||| |||||||||||    
T  35908572 ccctatttttacaagtttgtcgtttgcaaattttgttcttt-ctatctaggtttagcgcttgctaacc 35908506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 15351256 - 15351294
Alignment:
Q  2 caatcaatatagattggctattagggcttattccaacaa 40  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  15351256 caatcattatagattggctattagggcttattccaacaa 15351294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 15357848 - 15357886
Alignment:
Q  2 caatcaatatagattggctattagggcttattccaacaa 40  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  15357848 caatcattatagattggctattagggcttattccaacaa 15357886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 17781377 - 17781415
Alignment:
Q  2 caatcaatatagattggctattagggcttattccaacaa 40  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  17781377 caatcaatatagattggctattagggcttactccaacaa 17781415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 19090004 - 19090042
Alignment:
Q  2 caatcaatatagattggctattagggcttattccaacaa 40  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  19090004 caatcaatatagattggctattagggcttactccaacaa 19090042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 25857707 - 25857773
Alignment:
Q  43 ttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttatttt 108  Q
    |||| ||||||||| | |||| |||| ||||||||||||| ||||||||| ||||||||||||||||    
T  25857707 tttttattcaataataatatttgagacttttctctcaattgtggtggatttcggaaacccttatttt 25857773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 15601152 - 15601185
Alignment:
Q  7 aatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||||||||||||||||||||||||    
T  15601152 aatatagattggctattagggcttattccaacaa 15601185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 17136174 - 17136137
Alignment:
Q  2 caatcaatatagattggctattagggcttattccaaca 39  Q
    |||||||||||||||||||||||||||||| |||||||    
T  17136174 caatcaatatagattggctattagggcttactccaaca 17136137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 1151150 - 1151201
Alignment:
Q  74 tctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaa 128  Q
    ||||||||||||||||||||| ||||||   ||||||||||||||| ||||||||    
T  1151150 tctcaattctggtggattccgaaaaccc---ttttgataggtttgttgcttgcaa 1151201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 130
Target Start/End: Complemental strand, 25340256 - 25340169
Alignment:
Q  42 tttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 130  Q
    ||||| |||||||||||||  |||| |  || |||||||| || |||||||| |||||||||| |||||||||||||| || |||||||    
T  25340256 ttttttattcaataaaatttatcgacaacttttctcaattatgatggattccagaaaccctta-tttgataggtttgttgcgtgcaacc 25340169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 17200445 - 17200484
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaacaa 40  Q
    |||||||| |||||||||||||||||||||| ||||||||    
T  17200445 ccaatcaacatagattggctattagggcttactccaacaa 17200484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 13516756 - 13516718
Alignment:
Q  2 caatcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||| |||||||||||||||||||||| ||||||||    
T  13516756 caatcaacatagattggctattagggcttactccaacaa 13516718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 18510866 - 18510828
Alignment:
Q  2 caatcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  18510866 caatcaatatagattggatattagggcttactccaacaa 18510828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18519923 - 18519885
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaaca 39  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  18519923 ccaatcaatatagattggctattaggacttactccaaca 18519885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 18522607 - 18522569
Alignment:
Q  2 caatcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  18522607 caatcaatatagattggatattagggcttactccaacaa 18522569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 33175835 - 33175922
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgt-tcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtc 215  Q
    ||||||||||||| |||||||||  |||||||||||| ||||||| || ||||||||  | ||||| | |||||||||||| ||||||||    
T  33175835 aaccctattttcataagtttgtcctttgcaaacttgtctcttttcaatataggtttatcgtttgct-agcctacgcttccg-actgcgtc 33175922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 53013020 - 53013048
Alignment:
Q  185 gcttgctaaccctacgcttccgtactgcg 213  Q
    |||||||||||||||||||||||||||||    
T  53013020 gcttgctaaccctacgcttccgtactgcg 53013048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 170; Significance: 4e-91; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 60 - 299
Target Start/End: Original strand, 3535967 - 3536207
Alignment:
Q  60 tattcgagattttctctcaatt-ctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaa 158  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3535967 tattcgagattttctctcaatttctggtggattccggaa-cccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaa 3536065  T
Q  159 cttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttctcctgttctttttctaacgtg 258  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||    ||||||    
T  3536066 cttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtcagttgacatcagagcaggtttcccctgttctttcgtgaacgtg 3536165  T
Q  259 at-cagccatgggtgatcaaccggttacgagggcagaatttg 299  Q
    || |||||||||| |||||| |||| || |||||||||||||    
T  3536166 atccagccatgggagatcaatcggtcactagggcagaatttg 3536207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 60 - 219
Target Start/End: Original strand, 3542178 - 3542337
Alignment:
Q  60 tattcgagattttctctcaatt-ctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaa 158  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3542178 tattcgagattttctctcaatttctggtggattccggaa-cccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttacaaa 3542276  T
Q  159 cttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagtt 219  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3542277 cttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtcagtt 3542337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 40 - 230
Target Start/End: Original strand, 30049829 - 30050019
Alignment:
Q  40 actttttgattcaataaaattattcgagattttctctcaattct-ggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttc 138  Q
    ||||||| ||||| ||| | |||||||||||||||||||||| | |||||||||||||| |||| |||||||||||||||||||||||||| ||||||||    
T  30049829 acttttttattcattaataatattcgagattttctctcaatttttggtggattccggaa-ccctaattttgataggtttgtcgcttgcaactctattttc 30049927  T
Q  139 acaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagc 230  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||    
T  30049928 acaagtttgtcgcttgcaaacttgttcttttctatataggtttagcgcttgctaacccttcgcttccgtactgcgtcagttggcatcagagc 30050019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 40 - 230
Target Start/End: Original strand, 30052116 - 30052306
Alignment:
Q  40 actttttgattcaataaaattattcgagattttctctcaattct-ggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttc 138  Q
    ||||||| ||||| ||| | |||||||||||||||||||||| | |||||||||||||| |||| |||||||||||||||||||||||||| ||||||||    
T  30052116 acttttttattcattaataatattcgagattttctctcaatttttggtggattccggaa-ccctaattttgataggtttgtcgcttgcaactctattttc 30052214  T
Q  139 acaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagc 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| || |||| ||||||||||||||| ||||||||    
T  30052215 acaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgctttctaacccttcgattccatactgcgtcagttggcatcagagc 30052306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 43 - 212
Target Start/End: Complemental strand, 29340980 - 29340810
Alignment:
Q  43 ttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcaca 141  Q
    |||| ||||| ||| | ||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  29340980 tttttattcattaataatattcgagacttttctctcaattctagtggattccggaaacctttattttgataggtttgtcgcttgtaaccctattttcaca 29340881  T
Q  142 agtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgc 212  Q
    ||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||    
T  29340880 agtttgtcgcttgcaaacttgtttttttctatctaggtttagcgcctgctaaccctacgcttccgtactgc 29340810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 175 - 329
Target Start/End: Original strand, 11190516 - 11190669
Alignment:
Q  175 taggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttctcctgttctttttctaacgtgatcagccatgggtgat 274  Q
    ||||||||||| |||||||||||  ||||||||| ||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||| || |||    
T  11190516 taggtttagtgtttgctaaccctt-gcttccgtattgcttcagttggtatcagagcaggtttctcctgttcgtttcctaacgtgatcagccataggagat 11190614  T
Q  275 caaccggttacgagggcagaatttggcagtttaaatgcggccgccaaagctctgt 329  Q
    ||||||||||| |  | |||||||| |||||||| |||| |||||||||||||||    
T  11190615 caaccggttacaaaaggagaatttgacagtttaattgcgaccgccaaagctctgt 11190669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 11190412 - 11190500
Alignment:
Q  40 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  11190412 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaa-cctta-tttgataggtttgtcgcttgcaacc 11190500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 134 - 277
Target Start/End: Complemental strand, 18718279 - 18718139
Alignment:
Q  134 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcagg 233  Q
    ||||||||||||||||  |||| || ||||  ||||| |||||||||||| |||||||| || ||| |||| |||||||||| |||||||||||||||||    
T  18718279 ttttcacaagtttgtc--ttgcgaatttgtctttttcaatctaggtttagcgcttgctagcc-tacacttctgtactgcgtccgttggtatcagagcagg 18718183  T
Q  234 tttctcctgttctttttctaacgtgatcagccatgggtgatcaa 277  Q
    |||||||||||||||| ||||| |||||||||||||| ||||||    
T  18718182 tttctcctgttcttttcctaacatgatcagccatgggagatcaa 18718139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 132 - 278
Target Start/End: Complemental strand, 8049049 - 8048904
Alignment:
Q  132 tattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagca 231  Q
    |||||||||||||||||| ||||||||||| |||||||  ||||||| ||| |||||||| | |||||||||| ||| || |||||||||||||||||||    
T  8049049 tattttcacaagtttgtcacttgcaaactttttctttttaatctaggattaatgcttgct-agcctacgcttctgtattgggtcagttggtatcagagca 8048951  T
Q  232 -ggtttctcctgttctttttctaacgtgatcagccatgggtgatcaac 278  Q
     |||||||||||||||||| |||||| ||| ||||||||| |||||||    
T  8048950 tggtttctcctgttcttttcctaacg-gattagccatgggagatcaac 8048904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 131 - 195
Target Start/End: Original strand, 11658936 - 11659000
Alignment:
Q  131 ctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaacc 195  Q
    |||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  11658936 ctattttcacaagtttatcgcttgcaaatttgttcttttcaatctaggtttagtgcttgctaacc 11659000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 48 - 130
Target Start/End: Original strand, 26571071 - 26571152
Alignment:
Q  48 attcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 130  Q
    |||||||||||||||||||||||||||||||||||| | |||||||| |||||| || ||| |||| ||||||||||||||||    
T  26571071 attcaataaaattattcgagattttctctcaattctagcggattccgaaaaccccta-tttaatagatttgtcgcttgcaacc 26571152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 27822207 - 27822118
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgtt-cttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    |||||| ||||||||||||||||||||| ||||||||| ||||||||| ||||||||| | ||||| | ||||||||||||||||||||||    
T  27822207 aaccctgttttcacaagtttgtcgcttgaaaacttgttccttttctatttaggtttagcgtttgct-agcctacgcttccgtactgcgtca 27822118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 33615593 - 33615504
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||| | | |||||| ||||||| |||||||    
T  33615593 aaccctattttcacaagtttgtcgcttgcaaacttgttctttttctatctaggttttgcgcttg-ttagcctacgtttccgtaatgcgtca 33615504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 216 - 280
Target Start/End: Complemental strand, 24443073 - 24443009
Alignment:
Q  216 agttggtatcagagcaggtttctcctgttctttttctaacgtgatcagccatgggtgatcaaccg 280  Q
    |||||||||||||||| ||||||| ||||||||| |||||||||||||||||||| |||||||||    
T  24443073 agttggtatcagagcatgtttctcttgttcttttcctaacgtgatcagccatgggcgatcaaccg 24443009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 29342061 - 29342113
Alignment:
Q  164 tcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29342061 tcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtca 29342113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 3565652 - 3565739
Alignment:
Q  43 ttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 130  Q
    |||| ||||||||||| ||||||||| |||||||||||||||||||||||  |||||| |||| |||||||||||| |||||| |||||    
T  3565652 ttttcattcaataaaaatattcgagacttttctctcaattctggtggattttggaaactctta-tttgataggtttatcgcttacaacc 3565739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 2339223 - 2339157
Alignment:
Q  41 ctttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattt 107  Q
    |||||| ||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||    
T  2339223 ctttttcattcaataaaattat-cgagacttttctctcaattctggtggatttcggaaacccttattt 2339157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 261
Target Start/End: Original strand, 14238436 - 14238568
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatc 225  Q
    |||| ||||||||||||||||||||||||||||||| |||||||| || || |||||||| ||||| | |||| | |||  |  || |||| ||||||      
T  14238436 aaccttattttcacaagtttgtcgcttgcaaacttgtttcttttcaatttatgtttagtgtttgct-agcctatgtttc--tgatgtgtcatttggtaat 14238532  T
Q  226 agagcaggtttctcctgttctttttctaacgtgatc 261  Q
    |||| ||||||||||||||||||| ||||| |||||    
T  14238533 agagtaggtttctcctgttcttttcctaacatgatc 14238568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 27381513 - 27381552
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27381513 ccaatcaatatagattggctattagggcttattccaacaa 27381552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 27471896 - 27471935
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27471896 ccaatcaatatagattggctattagggcttattccaacaa 27471935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 29308836 - 29308797
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  29308836 ccaatcaatatagattggctattagggcttattccaacaa 29308797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 29315796 - 29315757
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  29315796 ccaatcaatatagattggctattagggcttattccaacaa 29315757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 17691701 - 17691737
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaa 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  17691701 ccaatcaatatagattggctattagggcttattccaa 17691737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 18727115 - 18727186
Alignment:
Q  134 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccg 206  Q
    |||||||||||||||||||||| |||||||  ||||| |||||||||||| | ||||| | ||||||||||||    
T  18727115 ttttcacaagtttgtcgcttgcgaacttgtgtttttcaatctaggtttagcgtttgct-agcctacgcttccg 18727186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 1127258 - 1127320
Alignment:
Q  131 ctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgcta 192  Q
    |||||||||||| ||||||||||||||||||| |||||||  |||||||||||| ||| ||||    
T  1127258 ctattttcacaaatttgtcgcttgcaaacttgtttctttttaatctaggtttagcgctcgcta 1127320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 12882123 - 12882189
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgt-tcttttctatctaggtttagtgcttgcta 192  Q
    |||||||||||||||||||||||||||  |||||||| |||| || ||||||||| |||| ||||||    
T  12882123 aaccctattttcacaagtttgtcgctttaaaacttgtctcttctcaatctaggttcagtgtttgcta 12882189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 13645955 - 13645898
Alignment:
Q  70 tttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaa 128  Q
    ||||||||||||||| | ||||||||||||||||| ||| |||||||||| ||||||||    
T  13645955 tttctctcaattctgttagattccggaaaccctta-tttaataggtttgttgcttgcaa 13645898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 11651667 - 11651630
Alignment:
Q  2 caatcaatatagattggctattagggcttattccaaca 39  Q
    |||||||||||||||||||||||||||||| |||||||    
T  11651667 caatcaatatagattggctattagggcttactccaaca 11651630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 129
Target Start/End: Complemental strand, 2939837 - 2939780
Alignment:
Q  70 tttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaac 129  Q
    |||||||||||| ||||||||| || ||||| |||||| |||||||||||||||||||||    
T  2939837 tttctctcaattatggtggatttcgaaaacc-ttattt-gataggtttgtcgcttgcaac 2939780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 17684734 - 17684769
Alignment:
Q  5 tcaatatagattggctattagggcttattccaacaa 40  Q
    |||| |||||||||||||||||||||||||||||||    
T  17684734 tcaacatagattggctattagggcttattccaacaa 17684769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 25537427 - 25537462
Alignment:
Q  5 tcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||||||||||||||||| ||||||||    
T  25537427 tcaatatagattggctattagggcttaatccaacaa 25537462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 108
Target Start/End: Original strand, 19232329 - 19232363
Alignment:
Q  74 tctcaattctggtggattccggaaacccttatttt 108  Q
    |||||||| ||||||||||||||||||||||||||    
T  19232329 tctcaattttggtggattccggaaacccttatttt 19232363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 390
Target Start/End: Original strand, 11190699 - 11190748
Alignment:
Q  341 acggcgttgacggctaagattgacaacatcaacaacaacaactgcaacta 390  Q
    |||| ||||||  ||||||||||||||  |||||||||||||||||||||    
T  11190699 acggggttgacaactaagattgacaaccgcaacaacaacaactgcaacta 11190748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 182
Target Start/End: Original strand, 22873822 - 22873870
Alignment:
Q  135 tttcacaagtttgtcgcttgcaaacttgt-tcttttctatctaggttta 182  Q
    ||||||||||||||||| ||||||||||| ||||||| || ||||||||    
T  22873822 tttcacaagtttgtcgcatgcaaacttgtctcttttcaatttaggttta 22873870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 192
Target Start/End: Complemental strand, 33215246 - 33215186
Alignment:
Q  133 attttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgcta 192  Q
    ||||||||| |||||||||||||||||||| |||||||  |||||| ||||| | ||||||    
T  33215246 attttcacaggtttgtcgcttgcaaacttgtttctttttaatctagatttagcgtttgcta 33215186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 167; Significance: 2e-89; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 69 - 299
Target Start/End: Complemental strand, 13444135 - 13443906
Alignment:
Q  69 ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttt 168  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13444135 ttttctctcaattctggtggattacggaaacccttattttgatatgtttgtcgcttgcaatcctattttcacaagtttgtcgcttgcaaacttgttcttt 13444036  T
Q  169 tctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggtttctcctgttctttttctaacgtgatcagccatg 268  Q
    ||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||||| |||||| |||||||||||    
T  13444035 tctatctaggtttagtgcttgttaaccctatgcttccgaactgcgtcagttggtatcagagcaggtttatcatgttcttttcctaacg-gatcagccatg 13443937  T
Q  269 ggtgatcaaccggttacgagggcagaatttg 299  Q
    || ||||||| | | ||||||||||| ||||    
T  13443936 ggagatcaactgatgacgagggcagagtttg 13443906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 40 - 216
Target Start/End: Complemental strand, 50857620 - 50857444
Alignment:
Q  40 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttca 139  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50857620 actttttgatacaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttca 50857521  T
Q  140 caagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    |||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  50857520 caagtttgtcgcttacaaacttattcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtca 50857444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 60 - 216
Target Start/End: Original strand, 8931153 - 8931309
Alignment:
Q  60 tattcgagattttctctcaatt-ctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaa 158  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8931153 tattcgagattttctctcaatttctggtggattccggaa-cccttatattgataggtttgtcgcttgcaaccctattttcacaagtttatcgcttgcaaa 8931251  T
Q  159 cttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    |||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  8931252 cttgtttttttcaatctaggtttagcgcttgctaaccctacgcttccgtactgcgtca 8931309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 132 - 287
Target Start/End: Original strand, 23987581 - 23987736
Alignment:
Q  132 tattttcacaagtttgtcgcttgcaaacttgttctttt-ctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagc 230  Q
    ||||||||||||||||||| ||||||| |||||||||| ||||||||||| || |||||||| ||||||||||||| | ||||||||||||||| | |||    
T  23987581 tattttcacaagtttgtcgtttgcaaagttgttctttttctatctaggttcagcgcttgcta-ccctacgcttccgaattgcgtcagttggtattaaagc 23987679  T
Q  231 aggtttctcctgttctttttctaacgtgatcagccatgggtgatcaaccggttacga 287  Q
    ||||||||| ||||||||| ||| ||||||||| |||||| ||||||||||| ||||    
T  23987680 aggtttctcttgttcttttcctagcgtgatcaggcatgggagatcaaccggtgacga 23987736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 69 - 210
Target Start/End: Complemental strand, 13441746 - 13441612
Alignment:
Q  69 ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttt 168  Q
    |||||||||||||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||       |||||||||| |||||||||    
T  13441746 ttttctctcaattctgatggattccggaaatccttattttaataggtttttcgcttgcaaccctattttcaca-------cgcttgcaaaattgttcttt 13441654  T
Q  169 tctatctaggtttagtgcttgctaaccctacgcttccgtact 210  Q
    |||||||| |||||| ||||||||||| ||| ||||||||||    
T  13441653 tctatctaagtttagcgcttgctaaccatactcttccgtact 13441612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 127 - 262
Target Start/End: Complemental strand, 28660835 - 28660701
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatc 225  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| | ||||| | |||||||||||| ||| ||||||||||||||    
T  28660835 aaccctattttcacaagtttgtcgcttgcaaacttgtttcttatctatctaggtttagcgtttgct-atcctacgcttccg-actacgtcagttggtatc 28660738  T
Q  226 agagcaggtttctcctgttctttttctaacgtgatca 262  Q
    |||| ||||||  | ||||||||| ||||||||||||    
T  28660737 agagtaggttttccatgttcttttcctaacgtgatca 28660701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 49 - 128
Target Start/End: Complemental strand, 12486392 - 12486314
Alignment:
Q  49 ttcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaa 128  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||| |||||||||| ||||||||    
T  12486392 ttcaataaaattattcgagattttctctcaattttggtggattccgaaaaccctta-tttaataggtttgttgcttgcaa 12486314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 31915550 - 31915638
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    ||||||||||||||||||||||||||||||||||||||  |||| | ||| |||||||||||||| | ||| |||||||||||| |||||    
T  31915550 aaccctattttcacaagtttgtcgcttgcaaacttgtttctttcaacctaagtttagtgcttgct-agcctgcgcttccgtactacgtca 31915638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 127 - 250
Target Start/End: Original strand, 10925740 - 10925859
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatca 226  Q
    |||| |||||| |||||||||||||||||||| |||||  |||| || ||||||||| |||||||| || | |||||||| |||||||| ||| ||||||    
T  10925740 aaccatatttttacaagtttgtcgcttgcaaaattgtt--tttcaatttaggtttagcgcttgctagcc-tccgcttccg-actgcgtctgttagtatca 10925835  T
Q  227 gagcaggtttctcctgttcttttt 250  Q
     ||||||||||||||||| |||||    
T  10925836 aagcaggtttctcctgtttttttt 10925859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 128
Target Start/End: Original strand, 40804571 - 40804660
Alignment:
Q  38 caactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaa 128  Q
    ||||||||| ||||||||| || |||||||| |||||||||||||||||||||||  |||||||| || |||||||||||||||||||||||    
T  40804571 caactttttcattcaataatat-attcgagacttttctctcaattctggtggattttggaaacccgta-tttgataggtttgtcgcttgcaa 40804660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 282
Target Start/End: Complemental strand, 8967893 - 8967738
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttct--atctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtat 224  Q
    ||||||||||||| | |||||||  ||||||||||||||||||||  |||||||||||  |||||| | || | |||||| | |||||||||  ||| |     
T  8967893 aaccctattttcataggtttgtcatttgcaaacttgttcttttctctatctaggtttaacgcttgcgagcctt-cgcttcgg-actgcgtcaagtggcac 8967796  T
Q  225 cagagcaggtttctcctgttctttttctaacgtgatcagccatgggtgatcaaccggt 282  Q
    || || ||||||||||||| |||||  ||| ||||||||||||||| |||||||||||    
T  8967795 catagtaggtttctcctgtccttttcgtaatgtgatcagccatgggagatcaaccggt 8967738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 42071489 - 42071413
Alignment:
Q  48 attcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttg 125  Q
    ||||||||||||||||||||||| |||||||||| || |||||||| ||||| |||| ||||||||||||||| ||||    
T  42071489 attcaataaaattattcgagattctctctcaattatgatggattccagaaacgctta-tttgataggtttgtcacttg 42071413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 134 - 216
Target Start/End: Complemental strand, 40058184 - 40058102
Alignment:
Q  134 ttttcacaagtttgtcgcttgcaaactt-gttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    |||||| |||||||||||||||||||||  ||||||||||| |||||||| |||||||| | ||||||||||||||| ||||||    
T  40058184 ttttcataagtttgtcgcttgcaaacttatttcttttctatttaggtttactgcttgct-agcctacgcttccgtaccgcgtca 40058102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 40804701 - 40804780
Alignment:
Q  200 gcttccgtactgcgtcagttggtatcagagcaggtttctcctgttctttttctaacgtgatcagccatgggtgatcaacc 279  Q
    |||||||| |||  ||||||||||||||  || ||||||||||||||||| |||||| ||||||||||||| ||||||||    
T  40804701 gcttccgttctggatcagttggtatcagtccatgtttctcctgttcttttcctaacgcgatcagccatgggagatcaacc 40804780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 12944116 - 12944182
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgcta 192  Q
    ||||||||||| |||||||||||| ||||||||||| |||||||| |||||| ||||| ||||||||    
T  12944116 aaccctatttttacaagtttgtcgtttgcaaacttgtttcttttcaatctagatttagcgcttgcta 12944182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18251974 - 18251936
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaaca 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18251974 ccaatcaatatagattggctattagggcttattccaaca 18251936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 18532775 - 18532813
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaaca 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18532775 ccaatcaatatagattggctattagggcttattccaaca 18532813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 31913380 - 31913442
Alignment:
Q  130 cctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgcta 192  Q
    |||||||| ||||||||||||||||||||||||||  |||| | |||||||||| ||||||||    
T  31913380 cctatttttacaagtttgtcgcttgcaaacttgtttctttcaacctaggtttagcgcttgcta 31913442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 129
Target Start/End: Complemental strand, 12033730 - 12033638
Alignment:
Q  37 acaactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaac 129  Q
    |||||||||| ||| ||||||| ||||||||| |||||||||||||||  ||||||  | ||||||| |||| |||| ||||||||||||||||    
T  12033730 acaacttttttatttaataaaaatattcgagacttttctctcaattctaatggattatgtaaaccctcattt-gataagtttgtcgcttgcaac 12033638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 50713713 - 50713770
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgt-tcttttctatctaggtttag 183  Q
    ||||||||||||||||||||||||| ||| ||||||| ||||||| ||||||||||||    
T  50713713 aaccctattttcacaagtttgtcgcctgcgaacttgtctcttttcaatctaggtttag 50713770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 43681465 - 43681528
Alignment:
Q  131 ctattttcacaagtttgtcgcttgcaaacttg--ttcttttctatctaggtttagtgcttgcta 192  Q
    |||||||||||| |||||||||||||||||||  || ||||| |||||||||||| ||||||||    
T  43681465 ctattttcacaaatttgtcgcttgcaaacttgtttttttttcaatctaggtttagcgcttgcta 43681528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 169
Target Start/End: Original strand, 10927199 - 10927234
Alignment:
Q  134 ttttcacaagtttgtcgcttgcaaacttgttctttt 169  Q
    ||||||||||||||||||||||||||||||||||||    
T  10927199 ttttcacaagtttgtcgcttgcaaacttgttctttt 10927234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 16359298 - 16359336
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaaca 39  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  16359298 ccaatcaatatagattggctattagggcttactccaaca 16359336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 206
Target Start/End: Original strand, 9031016 - 9031096
Alignment:
Q  126 caaccctattttcacaagtttgtcgcttgcaaacttgtt-cttttctatctaggtttagtgcttgctaaccctacgcttccg 206  Q
    |||||||||||||| |||||| | |||||||||||| || |||||| || |||||||||| |||||| | ||||||||||||    
T  9031016 caaccctattttcataagtttattgcttgcaaacttattccttttcaatataggtttagtacttgct-agcctacgcttccg 9031096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 27310840 - 27310877
Alignment:
Q  2 caatcaatatagattggctattagggcttattccaaca 39  Q
    |||||||||||||||||||||||||||||| |||||||    
T  27310840 caatcaatatagattggctattagggcttactccaaca 27310877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 42646624 - 42646674
Alignment:
Q  76 tcaattctggtggattccggaaacccttattttgataggtttgtcgcttgca 127  Q
    |||||| |||||||||| ||||||||||| |||||||||||||||| |||||    
T  42646624 tcaattttggtggattctggaaaccctta-tttgataggtttgtcgtttgca 42646674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 10928289 - 10928377
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgt-tcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    |||| |||||||||||||||||| ||| ||||||| | ||||||  ||||||||||||  |||||| | ||||||||||| ||||||||||    
T  10928289 aaccttattttcacaagtttgtcacttacaaacttatatctttttaatctaggtttagcacttgct-agcctacgcttcc-tactgcgtca 10928377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 8221488 - 8221545
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgt-tcttttctatctaggtttag 183  Q
    ||||||||||||| |||||||||| |||||||||||| ||| ||| |||| |||||||    
T  8221488 aaccctattttcataagtttgtcgtttgcaaacttgtctctattcaatcttggtttag 8221545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 39
Target Start/End: Original strand, 27131675 - 27131704
Alignment:
Q  10 atagattggctattagggcttattccaaca 39  Q
    ||||||||||||||||||||||||||||||    
T  27131675 atagattggctattagggcttattccaaca 27131704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 26981516 - 26981598
Alignment:
Q  132 tattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    |||||| |||||||| |||||||||||||||||  |||| |||||| |||||  || | ||| |||||||||||| |||||||||    
T  26981516 tatttttacaagtttttcgcttgcaaacttgtttctttcaatctagatttagccctagataa-cctacgcttccg-actgcgtca 26981598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 206
Target Start/End: Complemental strand, 28661157 - 28661078
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgctaaccctacgcttccg 206  Q
    ||||||||||| ||| |||| ||||||||||||||| ||||| || || |||||||||  |||||| | ||||||||||||    
T  28661157 aaccctatttttacaggtttttcgcttgcaaacttgtttcttatcaatttaggtttagcacttgct-agcctacgcttccg 28661078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 31913451 - 31913515
Alignment:
Q  235 ttctcctgttctttttctaacgtgatcagccatgggtgatcaaccggttacgagggcagaatttg 299  Q
    |||| |||||||||| |||||||||||| | ||||| ||||||| | |||| |||||||| ||||    
T  31913451 ttctactgttcttttcctaacgtgatcatctatgggagatcaactgattacaagggcagattttg 31913515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 33152808 - 33152756
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctagg 178  Q
    ||||||||| ||  |||||||||||||||||||||| |||||||| |||||||    
T  33152808 aaccctattgtcgtaagtttgtcgcttgcaaacttgtttcttttcaatctagg 33152756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 152; Significance: 2e-80; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 38 - 217
Target Start/End: Complemental strand, 6659508 - 6659330
Alignment:
Q  38 caactttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctatttt 137  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6659508 caactttttgattcactaaaactattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctatttt 6659409  T
Q  138 cacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcag 217  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||| |||||||||||||||||    
T  6659408 cacaagtttgtcgcttgcaaacttgttcttttctatctagatttagcgcttgctaa-cctacacttccgtactgcgtcag 6659330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 13085268 - 13085178
Alignment:
Q  40 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 130  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  13085268 acttttttattcaataaaattattcgagattttctctcaattttggtggattccgaaaacccttattttgataggtttgtcgcttgcaacc 13085178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 127 - 278
Target Start/End: Complemental strand, 13991468 - 13991318
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgtt-cttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatc 225  Q
    |||| ||||||| || |||||||||||||||||||||| |||||| |||||| ||||| |||||||| || |||||||||| ||||||||||||||||||    
T  13991468 aaccttattttcgcatgtttgtcgcttgcaaacttgtttcttttcaatctagatttagcgcttgctagcc-tacgcttccg-actgcgtcagttggtatc 13991371  T
Q  226 agagcaggtttctcctgttctttttctaacgtgatcagccatgggtgatcaac 278  Q
    | ||||  ||| || ||||| ||||||||||||||||| |||||  |||||||    
T  13991370 aaagcaaatttatcatgttcattttctaacgtgatcagtcatggtagatcaac 13991318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 127 - 336
Target Start/End: Complemental strand, 7724163 - 7723959
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatc 225  Q
    |||||||||||||   |||||||||| ||||||||| |||||||| || |||||||||  ||||||| |  |||| ||| |||||| |||||||| |||     
T  7724163 aaccctattttca---gtttgtcgctcgcaaacttgcttcttttcaatataggtttagcacttgctagca-tacgtttctgtactgtgtcagttgatat- 7724069  T
Q  226 agagcaggtttctcctgttctttttctaacgtgat-cagccatgggtgatcaaccggttacgagggcagaatttggcagtttaaatgcggccgccaaagc 324  Q
      |||| |||||||||||||||||||||||||||| || |||||| ||||||||| |||||||||||||| |||| | ||||| ||||| |   ||||||    
T  7724068 --agcaagtttctcctgttctttttctaacgtgattcaaccatggttgatcaaccagttacgagggcagattttgacggtttagatgcgactatcaaagc 7723971  T
Q  325 tctgttagatca 336  Q
    ||||| ||||||    
T  7723970 tctgtgagatca 7723959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 13086311 - 13086221
Alignment:
Q  40 actttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 130  Q
    ||||||| ||||||||||||||||||||||||||||||||||||  ||||||| | |||| |||||||||||||||||||||||| |||||    
T  13086311 actttttaattcaataaaattattcgagattttctctcaattctaatggattctgaaaactcttattttgataggtttgtcgcttacaacc 13086221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 127 - 287
Target Start/End: Complemental strand, 54700686 - 54700527
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgtt-cttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatc 225  Q
    ||||||||| ||||||||||||| |||||||||||||| |||||| || ||||||||| | |||||| || ||| ||  || ||||||||||||||||||    
T  54700686 aaccctattctcacaagtttgtcacttgcaaacttgtttcttttcaatataggtttagcgtttgctagcc-tacactctcg-actgcgtcagttggtatc 54700589  T
Q  226 agagcaggtttctcctgttctttttctaacgtgatcagccatgggtgatcaaccggttacga 287  Q
    ||||||||||||||||| | |||| | ||||||||||| |||  | ||||||||||| ||||    
T  54700588 agagcaggtttctcctgattttttcccaacgtgatcagtcattagagatcaaccggtgacga 54700527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 130
Target Start/End: Original strand, 22716590 - 22716661
Alignment:
Q  60 tattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 130  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22716590 tattcgagacttttctctcaattctggtggattccggaaaccctttttttgataggtttgtcgcttgcaacc 22716661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 22691253 - 22691312
Alignment:
Q  69 ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaa 128  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22691253 ttttctctcaattctggtggattccggaaacccttatttcgataggtttgtcgcttgcaa 22691312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 60 - 130
Target Start/End: Complemental strand, 22988627 - 22988556
Alignment:
Q  60 tattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 130  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  22988627 tattcgagacttttctctcaattctggtggattccggaaacccttttttcgataggtttgtcgcttgcaacc 22988556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 7723751 - 7723665
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtc 215  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||| ||||||| | |||||||||| ||||||||||    
T  7723751 aaccctattttcacaagtttgtagcttgcaaacttgttcttttcaatcta-gtttagcgcttgct-agcctacgcttctgtactgcgtc 7723665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 2053176 - 2053095
Alignment:
Q  48 attcaataaaattattcgagattttctc-tcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaac 129  Q
    ||||||||||||||||||||| ||| || |||||||| ||||||| |||||||||||| |||||||| |||||||||||||||    
T  2053176 attcaataaaattattcgagactttttcctcaattctagtggatttcggaaaccctta-tttgatagatttgtcgcttgcaac 2053095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 131 - 260
Target Start/End: Original strand, 7634084 - 7634212
Alignment:
Q  131 ctattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagag 229  Q
    |||||| ||||||||| ||| |||||||||||||| ||||| |||||||||||  |||| ||| |  |||||||| | |||||||||||||||| |||||    
T  7634084 ctatttccacaagtttatcgtttgcaaacttgttccttttcaatctaggtttaacgcttactagca-tacgcttctg-actgcgtcagttggtaacagag 7634181  T
Q  230 caggtttctcctgttctttttctaacgtgat 260  Q
     ||||||||| ||||||||| ||||| ||||    
T  7634182 taggtttctcttgttcttttcctaacatgat 7634212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 217
Target Start/End: Original strand, 24667657 - 24667746
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcag 217  Q
    |||||||||||||||||||||| || ||| | ||| ||||||||||||||||||||  ||||||| | ||||||||||| |||||||||||    
T  24667657 aaccctattttcacaagtttgttgcctgcgagcttcttcttttctatctaggtttaacgcttgct-agcctacgcttccatactgcgtcag 24667746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 130
Target Start/End: Original strand, 9596853 - 9596944
Alignment:
Q  39 aactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaacc 130  Q
    |||||||| ||||||||| | |||| |||| |||||||||||||||||||||||  ||||||||||| |||||||||||| ||| ||||||||    
T  9596853 aactttttcattcaataagaatatttgagacttttctctcaattctggtggattatggaaaccctta-tttgataggtttatcgtttgcaacc 9596944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 19935487 - 19935575
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    ||||||||||||| |||||||||||||||||| || || ||||||||||  |||||| ||| ||| | |||||||||| |||||||||||    
T  19935487 aaccctattttcataagtttgtcgcttgcaaatttatttttttctatctgagtttagcgctggct-agcctacgcttctgtactgcgtca 19935575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 226 - 287
Target Start/End: Original strand, 22691327 - 22691388
Alignment:
Q  226 agagcaggtttctcctgttctttttctaacgtgatcagccatgggtgatcaaccggttacga 287  Q
    |||||||||||||||||||||||| |||| ||||||||||||||| ||||||| ||| ||||    
T  22691327 agagcaggtttctcctgttcttttcctaaagtgatcagccatgggagatcaactggtgacga 22691388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 43 - 126
Target Start/End: Original strand, 4053062 - 4053145
Alignment:
Q  43 ttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgc 126  Q
    |||| ||||||||||| ||||||||| ||||||||||||| ||||||||| || ||| |||||  ||||||||||||||||||||    
T  4053062 ttttcattcaataaaaatattcgagacttttctctcaattatggtggatttcgaaaatcctta-cttgataggtttgtcgcttgc 4053145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 5713894 - 5713855
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5713894 ccaatcaatatagattggctattagggcttattccaacaa 5713855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 10621594 - 10621633
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10621594 ccaatcaatatagattggctattagggcttattccaacaa 10621633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 26963586 - 26963547
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26963586 ccaatcaatatagattggctattagggcttattccaacaa 26963547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 26970409 - 26970370
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26970409 ccaatcaatatagattggctattagggcttattccaacaa 26970370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 299
Target Start/End: Complemental strand, 50515978 - 50515822
Alignment:
Q  133 attttcacaagtttgtcgcttgcaaacttgtt-cttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagca 231  Q
    |||||||||||||||||||||||||||||||| ||| ||  |||| || ||| |||||||| || | |||||||| ||| |||||||||          |    
T  50515978 attttcacaagtttgtcgcttgcaaacttgtttcttctcagtctaagtgtagcgcttgctagcc-tccgcttccg-actacgtcagttga---------a 50515890  T
Q  232 ggtttctcctgttctttttctaacgtgatcagccatgggtgatcaaccggttacgagggcagaatttg 299  Q
    |||||||| |||||||||| ||||||||||||| ||||| |||||||| || ||||| ||||| ||||    
T  50515889 ggtttctcatgttctttttgtaacgtgatcagcaatgggagatcaaccagtgacgagagcagagtttg 50515822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 10628673 - 10628711
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaaca 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10628673 ccaatcaatatagattggctattagggcttattccaaca 10628711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 12357082 - 12357044
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaaca 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12357082 ccaatcaatatagattggctattagggcttattccaaca 12357044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 19927021 - 19927059
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaaca 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19927021 ccaatcaatatagattggctattagggcttattccaaca 19927059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 40206153 - 40206238
Alignment:
Q  131 ctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcag 217  Q
    ||||||||||||||||||||||||| |||||||   |||| || ||| ||||| ||||||| | |||||||||||||| ||||||||    
T  40206153 ctattttcacaagtttgtcgcttgcgaacttgtctctttcaatttagatttagcgcttgct-agcctacgcttccgtagtgcgtcag 40206238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 5707265 - 5707228
Alignment:
Q  2 caatcaatatagattggctattagggcttattccaaca 39  Q
    ||||||||||||||||||||||||||||||||||||||    
T  5707265 caatcaatatagattggctattagggcttattccaaca 5707228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 21433652 - 21433595
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaggtttag 183  Q
    ||||||||||||| ||||||||||||||| || |||||| ||||||||||||||||||    
T  21433652 aaccctattttcataagtttgtcgcttgcgaatttgttctttttctatctaggtttag 21433595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 124 - 183
Target Start/End: Complemental strand, 18689613 - 18689553
Alignment:
Q  124 tgcaaccctattttcacaagtttgtcgcttgcaaac-ttgttcttttctatctaggtttag 183  Q
    |||||||||||||| ||||||||||||| ||||||| || |||||||| ||||||||||||    
T  18689613 tgcaaccctatttttacaagtttgtcgcatgcaaacttttttcttttcaatctaggtttag 18689553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 38888079 - 38888023
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggttta 182  Q
    |||||||||||||||||||||||||||||||| ||| || ||||| |||||||||||    
T  38888079 aaccctattttcacaagtttgtcgcttgcaaatttgtttattttcaatctaggttta 38888023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 10494907 - 10494966
Alignment:
Q  131 ctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttg 189  Q
    ||||||||||| ||||||| |||||||||||| |||||||| |||||||||| |||||||    
T  10494907 ctattttcacaggtttgtcacttgcaaacttgtttcttttccatctaggtttggtgcttg 10494966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 22486861 - 22486799
Alignment:
Q  130 cctattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaggtttagtgcttgcta 192  Q
    |||||||||||||||| |||||||||||||||| || |||||||| ||||||||| ||||||||    
T  22486861 cctattttcacaagtt-gtcgcttgcaaacttggtctttttctatataggtttagcgcttgcta 22486799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 54239531 - 54239604
Alignment:
Q  50 tcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttg 125  Q
    ||||||||||||| |||||  || |||||||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  54239531 tcaataaaattat-cgagaacttttctcaattttggtggattccgaaaaccctta-tttgataggtttgtcccttg 54239604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 17142390 - 17142428
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaaca 39  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  17142390 ccaatcaatatagattggctattagggctttttccaaca 17142428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 18657128 - 18657070
Alignment:
Q  130 cctattttcacaagtttgtcgcttgcaaac-ttgttcttttctatctaggtttagtgct 187  Q
    |||||||| ||||||||||||| ||||||| || |||||||| ||||||||||||||||    
T  18657128 cctatttttacaagtttgtcgcatgcaaacttttttcttttcaatctaggtttagtgct 18657070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28393396 - 28393434
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaaca 39  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  28393396 ccaatcaatatagattggctattagggcttactccaaca 28393434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 42 - 127
Target Start/End: Complemental strand, 38223200 - 38223117
Alignment:
Q  42 tttttgattcaataaaattattcgagattttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgca 127  Q
    ||||| ||||||||||| |  |||||| ||| |||||||||| |||||||| | ||||||||| |||||||||||||||| |||||    
T  38223200 tttttcattcaataaaaattatcgagacttt-tctcaattctagtggattctgtaaaccctta-tttgataggtttgtcgtttgca 38223117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 868543 - 868507
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaa 37  Q
    ||||||||||||||||||||||||||| |||||||||    
T  868543 ccaatcaatatagattggctattagggtttattccaa 868507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 124
Target Start/End: Complemental strand, 34949169 - 34949082
Alignment:
Q  37 acaactttttgattcaataaaattattcgaga-ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgctt 124  Q
    |||||| ||| ||||||||||| ||||||||| ||||||||||| || |||||||| | ||||||| || ||| |||||||| ||||||    
T  34949169 acaactattttattcaataaaaatattcgagacttttctctcaaatcgggtggatttcagaaaccc-taatttaataggtttatcgctt 34949082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 69 - 128
Target Start/End: Complemental strand, 19684880 - 19684822
Alignment:
Q  69 ttttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaa 128  Q
    |||||||||||||||  || |||| |||||||||| ||| ||||||||||||||||||||    
T  19684880 ttttctctcaattctattgaattctggaaacccttgttt-gataggtttgtcgcttgcaa 19684822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 4426865 - 4426903
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaaca 39  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  4426865 ccaatcaatatagattggctattaggacttactccaaca 4426903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 55612632 - 55612594
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaaca 39  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  55612632 ccaatcaatatagattggttattagggcttattctaaca 55612594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 164
Target Start/End: Original strand, 9260573 - 9260610
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgtt 164  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  9260573 aaccctattttcgcaagtttgtcgtttgcaaacttgtt 9260610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 164
Target Start/End: Complemental strand, 13990766 - 13990729
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgtt 164  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  13990766 aaccctattttcacaagtttgttacttgcaaacttgtt 13990729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 17254968 - 17254893
Alignment:
Q  131 ctattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaggtttagtgcttgctaaccctacgcttccg 206  Q
    |||||||||||||||||||||||| ||| |||||| | ||| ||||| |||||| | ||||| | ||||||||||||    
T  17254968 ctattttcacaagtttgtcgcttgaaaatttgttcatcttcaatctaagtttagcgtttgct-agcctacgcttccg 17254893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 55139163 - 55139096
Alignment:
Q  151 cttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagtt 219  Q
    |||||||| |||||  |||| |||||||||||  ||||||||| ||||| ||||||| |||||||||||    
T  55139163 cttgcaaatttgtttatttcaatctaggtttaacgcttgctaa-cctacacttccgtgctgcgtcagtt 55139096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 107; Significance: 2e-53; HSPs: 3)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 43 - 216
Target Start/End: Complemental strand, 45435 - 45262
Alignment:
Q  43 ttttgattcaataaaattattcgagattttctctcaatt-ctggtggattccggaaacccttattttgataggtttgtcgcttgcaaccctattttcaca 141  Q
    |||| ||||| ||| | |||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||| |    
T  45435 tttttattcattaataatattcgagattttctctcaatttctggtggattctggaa-cccttattttgataggtttgtcgcttgcaaccttattttcata 45337  T
Q  142 agtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtca 216  Q
    |||||||||||||||||||||||||||  ||||||  ||||| ||||||||||||||||||||||||||| ||||    
T  45336 agtttgtcgcttgcaaacttgttctttcttatctaattttagcgcttgctaaccctacgcttccgtactgtgtca 45262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 143 - 236
Target Start/End: Complemental strand, 46806 - 46713
Alignment:
Q  143 gtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagcaggttt 236  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||| |||||    
T  46806 gtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctcaccctacgcttccgtactgcgtcagttggcatcagagccggttt 46713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 46880 - 46792
Alignment:
Q  40 actttttgattcaataaaattattcgagattttctctcaa-ttctggtggattccggaaacccttattttgataggtttgtcgcttgcaa 128  Q
    ||||||| ||||| ||| | |||||||||||||||||||| || ||||||||||||| |||| | |||||||||||||||||||||||||    
T  46880 acttttttattcattaataatattcgagattttctctcaatttttggtggattccgg-aaccttaattttgataggtttgtcgcttgcaa 46792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 77; Significance: 1e-35; HSPs: 3)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 131 - 279
Target Start/End: Original strand, 16051 - 16196
Alignment:
Q  131 ctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagc 230  Q
    ||||||||| | ||||||| |||||||||||||||||||||||||||||||||  |||| || || |||| ||||| |||||||||||||||||||||||    
T  16051 ctattttcagatgtttgtcacttgcaaacttgttcttttctatctaggtttagcacttgttagcc-tacg-ttccg-actgcgtcagttggtatcagagc 16147  T
Q  231 aggtttctcctgttctttttctaacgtgatcagccatgggtgatcaacc 279  Q
    |||||||||| |||||||| |||| ||||||||||||| | ||||||||    
T  16148 aggtttctccagttcttttcctaatgtgatcagccatgagagatcaacc 16196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 130 - 270
Target Start/End: Original strand, 14850 - 14988
Alignment:
Q  130 cctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagag 229  Q
    ||||||||||||||||| |||||||| ||||| ||  |||| ||| |||||||| |||||||| || ||||||||   | ||||||||||||||||||||    
T  14850 cctattttcacaagtttttcgcttgccaacttatttatttcaatcaaggtttagcgcttgctagcc-tacgcttcta-attgcgtcagttggtatcagag 14947  T
Q  230 caggtttctcctgttctttttctaacgtgatcagccatggg 270  Q
    ||||||||||| |||||||| ||||| | ||||||||||||    
T  14948 caggtttctcccgttcttttcctaacttaatcagccatggg 14988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 266
Target Start/End: Original strand, 1658 - 1797
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccct-acgcttccgtactgcgtcagttggtatc 225  Q
    |||| |||||| |||||||||||| |||||||||||||  |||| |||||||||||  |||||||| |  | || | || | |||| || ||||||||||    
T  1658 aaccatattttgacaagtttgtcgtttgcaaacttgtttctttcaatctaggtttaacgcttgctagcaattacacgtctg-actgtgttagttggtatc 1756  T
Q  226 agagcaggtttctcctgttctttttctaacgtgatcagcca 266  Q
    |||| | ||||||||| ||||||| ||||||||||||||||    
T  1757 agagtaagtttctcctattcttttcctaacgtgatcagcca 1797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0531 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0531
Description:

Target: scaffold0531; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 132 - 278
Target Start/End: Complemental strand, 11672 - 11527
Alignment:
Q  132 tattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaaccctacgcttccgtactgcgtcagttggtatcagagca 231  Q
    |||||||||||||||||| ||||||||||| |||||||  ||||||| ||| |||||||| | |||||||||| ||| || |||||||||||||||||||    
T  11672 tattttcacaagtttgtcacttgcaaactttttctttttaatctaggattaatgcttgct-agcctacgcttctgtattgggtcagttggtatcagagca 11574  T
Q  232 -ggtttctcctgttctttttctaacgtgatcagccatgggtgatcaac 278  Q
     |||||||||||||||||| |||||| ||| ||||||||| |||||||    
T  11573 tggtttctcctgttcttttcctaacg-gattagccatgggagatcaac 11527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 211 - 375
Target Start/End: Complemental strand, 15084 - 14920
Alignment:
Q  211 gcgtcagttggtatcagagcaggtttctcctgttctttttctaacgtgatcagccatgggtgatcaaccggttacgagggcagaatttggcagtttaaat 310  Q
    |||||||||| |||||||||||||||||  ||||||||| ||||| |||||||||||||| |||||||||||||| ||||||||||||  |||||||| |    
T  15084 gcgtcagttgatatcagagcaggtttcttgtgttcttttactaacttgatcagccatgggagatcaaccggttacaagggcagaatttaacagtttaatt 14985  T
Q  311 gcggccgccaaagctctgttagatcagtcgacggcgttgacggctaagattgacaacatcaacaa 375  Q
    ||||||| ||||  | ||| |||  ||  |||| | ||||| |||| ||||||||| ||||||||    
T  14984 gcggccgtcaaaaatatgtcagactagatgacgacattgacagctatgattgacaagatcaacaa 14920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 37714 - 37772
Alignment:
Q  130 cctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgctt 188  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  37714 cctattttcataagtttgtcgcttgcaaacttgttcttttcaatctaggtttagcgctt 37772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 49322 - 49375
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtt 180  Q
    ||||||||||||| ||||||||||||||||||||||||||| || |||||||||    
T  49322 aaccctattttcataagtttgtcgcttgcaaacttgttcttctcaatctaggtt 49375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 8331 - 8243
Alignment:
Q  40 actttttgattcaataaaattattcgagat-tttctctcaattctggtggattccggaaacccttattttgataggtttgtcgcttgcaac 129  Q
    ||||||| ||||||| ||||| |||||||| ||| ||||||||||| |||||||| |||||||||| ||||| ||||||||||||||||||    
T  8331 actttttcattcaatcaaatt-ttcgagatctttttctcaattctgatggattccagaaaccctta-tttgacaggtttgtcgcttgcaac 8243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 9702 - 9769
Alignment:
Q  127 aaccctattttcacaagttt--gtcgcttgcaaacttgttcttttctatctaggtttagtgcttgcta 192  Q
    |||||||||||||||||| |  |||||||| ||||||||||||||| |||||||||||  ||||||||    
T  9702 aaccctattttcacaagtgttagtcgcttggaaacttgttcttttcaatctaggtttaccgcttgcta 9769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 266
Target Start/End: Original strand, 17640 - 17779
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaac-cctacgcttccgtactgcgtcagttggtatc 225  Q
    |||| |||||| |||||||||||| |||||||||||||  |||| |||||||||||  |||||||| |   ||| | || | |||| || ||||||||||    
T  17640 aaccatattttgacaagtttgtcgtttgcaaacttgtttctttcaatctaggtttaacgcttgctagcaattacacgtctg-actgtgttagttggtatc 17738  T
Q  226 agagcaggtttctcctgttctttttctaacgtgatcagcca 266  Q
    |||| | |||||| || ||||||| ||||||||||||||||    
T  17739 agagtaagtttctactattcttttcctaacgtgatcagcca 17779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 7053 - 7014
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7053 ccaatcaatatagattggctattagggcttattccaacaa 7014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 16561 - 16522
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  16561 ccaatcaatatagattggctattagggcttattccaacaa 16522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 2582 - 2621
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2582 ccaatcaatatagattggctattagggcttattccaacaa 2621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 11473 - 11512
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11473 ccaatcaatatagattggctattagggcttattccaacaa 11512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 23787 - 23826
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  23787 ccaatcaatatagattggctattagggcttattccaacaa 23826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 8564 - 8603
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8564 ccaatcaatatagattggctattagggcttattccaacaa 8603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 939 - 901
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaaca 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  939 ccaatcaatatagattggctattagggcttattccaaca 901  T

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Target: scaffold0390 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 7196 - 7234
Alignment:
Q  2 caatcaatatagattggctattagggcttattccaacaa 40  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7196 caatcaatatagattggctattagggcttattccaacaa 7234  T

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Target: scaffold0390; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 14212 - 14249
Alignment:
Q  2 caatcaatatagattggctattagggcttattccaaca 39  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14212 caatcaatatagattggctattagggcttattccaaca 14249  T

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Target: scaffold0220 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18234 - 18196
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaaca 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18234 ccaatcaatatagattggctattagggcttattccaaca 18196  T

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Target: scaffold0767 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 1 - 37
Alignment:
Q  3 aatcaatatagattggctattagggcttattccaaca 39  Q
    |||||||||||||||||||||||||||||||||||||    
T  1 aatcaatatagattggctattagggcttattccaaca 37  T

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Target: scaffold0186 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 26248 - 26287
Alignment:
Q  1 ccaatcaatatagattggctattagggcttattccaacaa 40  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  26248 ccaatcaatatagattgactattagggcttattccaacaa 26287  T

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Target: scaffold0705 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0705
Description:

Target: scaffold0705; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 60 - 98
Alignment:
Q  2 caatcaatatagattggctattagggcttattccaacaa 40  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  60 caatcattatagattggctattagggcttattccaacaa 98  T

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Target: scaffold0024 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 145734 - 145800
Alignment:
Q  127 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaggtttagtgcttgcta 192  Q
    ||||||||||| ||||| |||||||||||||||||| || ||||| |||||||||||| | ||||||    
T  145734 aaccctatttttacaagcttgtcgcttgcaaacttgatttttttcaatctaggtttagcgattgcta 145800  T

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Target: scaffold0236 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 195
Target Start/End: Original strand, 16402 - 16466
Alignment:
Q  131 ctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgctaacc 195  Q
    |||||||| |||||||||||||||||||||  || ||||  |||||||||||||| || ||||||    
T  16402 ctattttctcaagtttgtcgcttgcaaactcattttttttaatctaggtttagtgtttactaacc 16466  T

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Target: scaffold0154 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 107
Target Start/End: Complemental strand, 28744 - 28711
Alignment:
Q  74 tctcaattctggtggattccggaaacccttattt 107  Q
    ||||||||||||| ||||||||||||||||||||    
T  28744 tctcaattctggtagattccggaaacccttattt 28711  T

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