View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2837_high_26 (Length: 296)

Name: NF2837_high_26
Description: NF2837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2837_high_26
NF2837_high_26
[»] chr7 (61 HSPs)
chr7 (3-236)||(4958413-4958646)
chr7 (188-253)||(21759972-21760037)
chr7 (188-253)||(38391824-38391889)
chr7 (188-253)||(83461-83526)
chr7 (188-255)||(46211505-46211572)
chr7 (187-253)||(759078-759144)
chr7 (188-250)||(3178192-3178254)
chr7 (188-250)||(16904458-16904520)
chr7 (188-251)||(28103811-28103874)
chr7 (188-250)||(9786067-9786129)
chr7 (246-296)||(19072986-19073036)
chr7 (251-296)||(4612086-4612131)
chr7 (188-253)||(5524456-5524521)
chr7 (209-250)||(42935740-42935781)
chr7 (192-253)||(48608938-48608999)
chr7 (188-250)||(26974108-26974170)
chr7 (188-250)||(28202297-28202359)
chr7 (188-253)||(8592428-8592493)
chr7 (188-253)||(11373416-11373481)
chr7 (188-253)||(27921064-27921129)
chr7 (188-253)||(40076391-40076456)
chr7 (188-253)||(44180281-44180346)
chr7 (209-250)||(44424214-44424255)
chr7 (252-296)||(31466358-31466402)
chr7 (252-296)||(36905743-36905787)
chr7 (189-253)||(41506054-41506118)
chr7 (252-296)||(47713502-47713546)
chr7 (185-252)||(7457406-7457473)
chr7 (188-247)||(21390377-21390436)
chr7 (215-250)||(43874002-43874037)
chr7 (187-253)||(16560557-16560623)
chr7 (187-253)||(16605039-16605105)
chr7 (188-250)||(34947579-34947641)
chr7 (188-253)||(24516277-24516342)
chr7 (188-252)||(2459546-2459610)
chr7 (252-296)||(10464115-10464159)
chr7 (252-296)||(23473969-23474013)
chr7 (252-296)||(31110842-31110886)
chr7 (209-253)||(33819290-33819334)
chr7 (209-253)||(34100556-34100600)
chr7 (252-296)||(34478008-34478052)
chr7 (252-292)||(36819917-36819957)
chr7 (252-292)||(37950945-37950985)
chr7 (252-292)||(47081201-47081241)
chr7 (252-296)||(48531539-48531583)
chr7 (187-250)||(13962038-13962101)
chr7 (249-292)||(36859205-36859248)
chr7 (188-250)||(2850869-2850931)
chr7 (187-253)||(12631381-12631447)
chr7 (188-250)||(19060389-19060451)
chr7 (188-250)||(23670565-23670626)
chr7 (250-284)||(32972136-32972170)
chr7 (188-250)||(49101745-49101807)
chr7 (188-253)||(7463289-7463354)
chr7 (188-253)||(22738777-22738842)
chr7 (188-253)||(29835402-29835467)
chr7 (244-284)||(31110616-31110656)
chr7 (252-296)||(35500747-35500791)
chr7 (252-296)||(37231563-37231607)
chr7 (252-292)||(42834292-42834332)
chr7 (252-296)||(47538140-47538184)
[»] chr8 (59 HSPs)
chr8 (188-256)||(29226213-29226281)
chr8 (209-264)||(32678776-32678831)
chr8 (188-252)||(21216083-21216147)
chr8 (188-250)||(36967433-36967495)
chr8 (187-253)||(39329088-39329154)
chr8 (188-250)||(45425648-45425710)
chr8 (188-253)||(1875574-1875639)
chr8 (188-253)||(13335285-13335350)
chr8 (252-296)||(3293101-3293145)
chr8 (209-253)||(34393957-34394001)
chr8 (188-252)||(40996347-40996411)
chr8 (249-296)||(30380747-30380794)
chr8 (187-250)||(42972489-42972552)
chr8 (208-250)||(5053155-5053197)
chr8 (188-250)||(10097973-10098035)
chr8 (188-250)||(31271093-31271155)
chr8 (188-250)||(33765732-33765794)
chr8 (254-296)||(38845824-38845866)
chr8 (188-237)||(51197-51246)
chr8 (188-249)||(26626094-26626155)
chr8 (188-253)||(39482684-39482749)
chr8 (190-262)||(1739700-1739772)
chr8 (209-253)||(2767294-2767338)
chr8 (175-235)||(21649307-21649367)
chr8 (188-252)||(22771817-22771881)
chr8 (188-250)||(4428334-4428395)
chr8 (246-296)||(8350874-8350924)
chr8 (188-250)||(9300095-9300157)
chr8 (250-296)||(37710116-37710162)
chr8 (187-249)||(39329370-39329431)
chr8 (188-253)||(7172983-7173048)
chr8 (188-253)||(10179929-10179994)
chr8 (251-292)||(30290145-30290186)
chr8 (188-253)||(34948669-34948734)
chr8 (188-253)||(39405831-39405896)
chr8 (252-292)||(2805476-2805516)
chr8 (252-296)||(2986542-2986586)
chr8 (252-296)||(14522596-14522640)
chr8 (252-296)||(18809493-18809537)
chr8 (252-292)||(23249073-23249113)
chr8 (252-296)||(43066343-43066387)
chr8 (252-292)||(45082033-45082073)
chr8 (199-253)||(4924060-4924114)
chr8 (188-250)||(14854916-14854978)
chr8 (215-253)||(44761503-44761541)
chr8 (251-296)||(6471062-6471107)
chr8 (188-253)||(11976918-11976983)
chr8 (188-253)||(17719240-17719305)
chr8 (252-293)||(31127805-31127846)
chr8 (209-250)||(31231802-31231843)
chr8 (252-293)||(38739877-38739918)
chr8 (255-296)||(40013868-40013909)
chr8 (252-284)||(2805705-2805737)
chr8 (244-284)||(21132720-21132760)
chr8 (252-292)||(29791163-29791203)
chr8 (188-252)||(31082689-31082753)
chr8 (205-249)||(34455684-34455728)
chr8 (209-237)||(39465812-39465840)
chr8 (252-284)||(40013651-40013683)
[»] chr1 (73 HSPs)
chr1 (209-264)||(35367650-35367705)
chr1 (188-253)||(21909990-21910055)
chr1 (187-253)||(31042866-31042932)
chr1 (188-253)||(16395031-16395096)
chr1 (210-253)||(49223992-49224035)
chr1 (188-253)||(12039151-12039216)
chr1 (209-250)||(40144852-40144893)
chr1 (188-250)||(26093466-26093528)
chr1 (188-250)||(27687313-27687375)
chr1 (187-253)||(28749060-28749126)
chr1 (209-255)||(37506194-37506240)
chr1 (250-296)||(38458947-38458993)
chr1 (251-296)||(1849918-1849963)
chr1 (188-253)||(6267840-6267905)
chr1 (188-253)||(23168977-23169042)
chr1 (188-253)||(38787410-38787475)
chr1 (188-253)||(39864180-39864245)
chr1 (209-250)||(42410066-42410107)
chr1 (205-253)||(6160460-6160508)
chr1 (214-250)||(15699194-15699230)
chr1 (209-253)||(20209845-20209889)
chr1 (252-296)||(25531995-25532039)
chr1 (252-296)||(30529050-30529094)
chr1 (252-296)||(32988349-32988393)
chr1 (209-253)||(37276530-37276574)
chr1 (189-249)||(41080671-41080731)
chr1 (215-251)||(41121836-41121872)
chr1 (188-252)||(43500768-43500832)
chr1 (252-296)||(49805252-49805296)
chr1 (252-296)||(50539477-50539521)
chr1 (183-250)||(24880948-24881015)
chr1 (188-250)||(4441587-4441649)
chr1 (183-253)||(10495907-10495977)
chr1 (187-241)||(13579604-13579658)
chr1 (207-253)||(31154197-31154243)
chr1 (188-250)||(31978636-31978698)
chr1 (188-250)||(34031511-34031573)
chr1 (207-253)||(43614466-43614512)
chr1 (247-284)||(23393461-23393498)
chr1 (209-250)||(45331413-45331454)
chr1 (252-296)||(3898571-3898615)
chr1 (188-228)||(7352380-7352420)
chr1 (252-296)||(16265250-16265294)
chr1 (252-296)||(16266379-16266423)
chr1 (252-296)||(26441851-26441895)
chr1 (209-253)||(32825997-32826040)
chr1 (189-253)||(36701990-36702054)
chr1 (189-253)||(36718094-36718158)
chr1 (252-296)||(43680287-43680331)
chr1 (252-296)||(45234849-45234893)
chr1 (252-292)||(48264811-48264851)
chr1 (252-292)||(50876585-50876625)
chr1 (194-253)||(27897024-27897083)
chr1 (207-250)||(29074956-29074999)
chr1 (188-250)||(917096-917158)
chr1 (187-253)||(3312180-3312246)
chr1 (188-250)||(11449955-11450017)
chr1 (188-250)||(24991637-24991699)
chr1 (209-250)||(8896337-8896378)
chr1 (250-279)||(28036974-28037003)
chr1 (188-249)||(30754925-30754986)
chr1 (209-250)||(32970572-32970613)
chr1 (188-237)||(34332421-34332470)
chr1 (252-296)||(4605216-4605260)
chr1 (188-236)||(4659843-4659891)
chr1 (188-236)||(5179383-5179431)
chr1 (252-296)||(29162060-29162104)
chr1 (204-236)||(35538729-35538761)
chr1 (161-253)||(37177914-37178005)
chr1 (252-284)||(39354264-39354296)
chr1 (252-284)||(41855529-41855561)
chr1 (252-292)||(42708721-42708761)
chr1 (252-292)||(52379210-52379250)
[»] chr6 (37 HSPs)
chr6 (188-252)||(7072230-7072294)
chr6 (188-253)||(29363375-29363440)
chr6 (188-253)||(21010246-21010311)
chr6 (188-252)||(11655926-11655990)
chr6 (188-253)||(1063583-1063648)
chr6 (188-253)||(27448136-27448201)
chr6 (188-253)||(31894190-31894255)
chr6 (252-296)||(8796266-8796310)
chr6 (246-296)||(11114782-11114832)
chr6 (246-292)||(29979018-29979064)
chr6 (215-253)||(32440652-32440690)
chr6 (209-250)||(5302423-5302464)
chr6 (209-250)||(6802003-6802044)
chr6 (252-296)||(22020493-22020537)
chr6 (252-296)||(25435628-25435672)
chr6 (185-252)||(23142737-23142804)
chr6 (252-294)||(31855037-31855079)
chr6 (188-253)||(1781871-1781936)
chr6 (252-296)||(643431-643475)
chr6 (188-252)||(13909494-13909558)
chr6 (188-252)||(15058187-15058251)
chr6 (252-296)||(18992120-18992164)
chr6 (252-292)||(20662059-20662099)
chr6 (194-253)||(21804515-21804574)
chr6 (188-250)||(6834349-6834411)
chr6 (188-250)||(7920310-7920372)
chr6 (188-253)||(3291748-3291813)
chr6 (252-293)||(7097873-7097914)
chr6 (209-250)||(13087602-13087643)
chr6 (251-284)||(33121541-33121574)
chr6 (209-253)||(1955980-1956024)
chr6 (188-236)||(3720221-3720269)
chr6 (252-296)||(16696016-16696060)
chr6 (252-296)||(25163381-25163425)
chr6 (252-296)||(30237384-30237428)
chr6 (209-253)||(30716969-30717013)
chr6 (252-284)||(31854818-31854850)
[»] chr4 (80 HSPs)
chr4 (175-253)||(32469922-32470000)
chr4 (188-252)||(33790718-33790782)
chr4 (187-247)||(462033-462093)
chr4 (187-253)||(11907585-11907651)
chr4 (187-253)||(17237282-17237348)
chr4 (188-250)||(41711443-41711505)
chr4 (188-253)||(2066858-2066923)
chr4 (188-253)||(6609830-6609895)
chr4 (188-253)||(17114509-17114574)
chr4 (188-253)||(32884870-32884935)
chr4 (188-253)||(38502469-38502534)
chr4 (188-253)||(49175921-49175986)
chr4 (188-253)||(51625152-51625217)
chr4 (252-296)||(5744083-5744127)
chr4 (209-253)||(52859807-52859851)
chr4 (188-253)||(7061651-7061716)
chr4 (188-253)||(47464352-47464417)
chr4 (188-253)||(47773006-47773071)
chr4 (252-296)||(6494807-6494851)
chr4 (252-296)||(7738819-7738863)
chr4 (209-253)||(21240712-21240756)
chr4 (204-248)||(34321714-34321758)
chr4 (209-253)||(35380341-35380385)
chr4 (183-251)||(44536178-44536246)
chr4 (252-296)||(45198340-45198384)
chr4 (189-257)||(48914131-48914199)
chr4 (215-253)||(3689631-3689669)
chr4 (188-250)||(5841414-5841476)
chr4 (188-250)||(38405089-38405151)
chr4 (188-250)||(46396870-46396932)
chr4 (188-250)||(52247415-52247477)
chr4 (246-287)||(3708479-3708520)
chr4 (188-253)||(6643647-6643712)
chr4 (188-253)||(40122841-40122906)
chr4 (209-250)||(42517646-42517687)
chr4 (188-253)||(43237312-43237377)
chr4 (247-296)||(46212345-46212394)
chr4 (188-237)||(49579165-49579214)
chr4 (252-296)||(1377248-1377292)
chr4 (252-292)||(3442344-3442384)
chr4 (188-236)||(3669965-3670013)
chr4 (252-296)||(4209576-4209620)
chr4 (252-296)||(4264351-4264395)
chr4 (252-292)||(5735492-5735532)
chr4 (252-296)||(18359973-18360017)
chr4 (165-253)||(18532248-18532336)
chr4 (221-253)||(26147635-26147667)
chr4 (252-292)||(28152212-28152252)
chr4 (188-236)||(30192291-30192339)
chr4 (252-296)||(36602911-36602955)
chr4 (205-253)||(36985855-36985903)
chr4 (252-292)||(47579507-47579547)
chr4 (188-236)||(52869158-52869206)
chr4 (175-250)||(8175554-8175629)
chr4 (188-253)||(2653489-2653552)
chr4 (215-253)||(2942659-2942697)
chr4 (246-296)||(3443381-3443431)
chr4 (215-253)||(25233250-25233288)
chr4 (188-250)||(28500878-28500940)
chr4 (188-250)||(35311210-35311272)
chr4 (188-250)||(42616890-42616952)
chr4 (188-250)||(49428329-49428391)
chr4 (188-253)||(16821318-16821383)
chr4 (255-296)||(19525717-19525758)
chr4 (188-253)||(27880229-27880293)
chr4 (188-253)||(34360724-34360789)
chr4 (188-237)||(50263919-50263968)
chr4 (209-250)||(54506860-54506901)
chr4 (177-250)||(56250272-56250345)
chr4 (244-284)||(5744312-5744352)
chr4 (252-292)||(20678588-20678628)
chr4 (252-296)||(25644576-25644620)
chr4 (205-253)||(25869848-25869896)
chr4 (252-292)||(26205704-26205744)
chr4 (209-253)||(31370313-31370357)
chr4 (252-296)||(39260132-39260176)
chr4 (252-292)||(46803853-46803893)
chr4 (205-253)||(53412177-53412225)
chr4 (206-254)||(54123709-54123757)
chr4 (252-296)||(55190566-55190610)
[»] scaffold0294 (1 HSPs)
scaffold0294 (188-253)||(17104-17169)
[»] chr2 (52 HSPs)
chr2 (188-251)||(31448672-31448735)
chr2 (188-253)||(34120418-34120483)
chr2 (209-255)||(39785655-39785701)
chr2 (188-253)||(8947031-8947096)
chr2 (188-253)||(16463758-16463823)
chr2 (188-249)||(26607947-26608008)
chr2 (252-296)||(27559792-27559836)
chr2 (209-253)||(36794353-36794397)
chr2 (209-252)||(9458271-9458314)
chr2 (188-250)||(19937749-19937811)
chr2 (210-252)||(25637551-25637593)
chr2 (188-250)||(39691562-39691624)
chr2 (188-253)||(3323265-3323330)
chr2 (188-253)||(16805950-16806015)
chr2 (188-253)||(16845231-16845296)
chr2 (252-293)||(34827132-34827173)
chr2 (252-296)||(4045233-4045277)
chr2 (188-236)||(39443799-39443847)
chr2 (252-296)||(44330601-44330645)
chr2 (245-296)||(42038740-42038791)
chr2 (176-250)||(32783436-32783510)
chr2 (187-253)||(36354421-36354487)
chr2 (188-250)||(45235653-45235715)
chr2 (209-250)||(15359087-15359128)
chr2 (195-236)||(15435457-15435498)
chr2 (188-249)||(17695403-17695464)
chr2 (188-253)||(27501517-27501582)
chr2 (251-292)||(40425248-40425289)
chr2 (252-296)||(7442891-7442935)
chr2 (252-292)||(14707535-14707575)
chr2 (252-292)||(18718460-18718500)
chr2 (252-292)||(23671597-23671637)
chr2 (252-296)||(32775903-32775947)
chr2 (209-253)||(35313956-35314000)
chr2 (254-292)||(44283281-44283319)
chr2 (187-252)||(5789626-5789691)
chr2 (175-236)||(10005091-10005151)
chr2 (259-296)||(30708945-30708982)
chr2 (188-253)||(34225659-34225724)
chr2 (190-251)||(35242278-35242339)
chr2 (204-253)||(43699594-43699643)
chr2 (199-236)||(45169251-45169288)
chr2 (190-253)||(1206683-1206747)
chr2 (252-292)||(3987232-3987272)
chr2 (252-296)||(9877083-9877127)
chr2 (244-284)||(10333372-10333412)
chr2 (210-250)||(11367151-11367191)
chr2 (214-250)||(12520855-12520891)
chr2 (252-292)||(14372298-14372338)
chr2 (252-284)||(20682871-20682903)
chr2 (252-284)||(20917729-20917761)
chr2 (252-284)||(40471965-40471997)
[»] chr3 (60 HSPs)
chr3 (188-253)||(10366623-10366688)
chr3 (188-253)||(19823080-19823145)
chr3 (188-253)||(29023947-29024012)
chr3 (167-253)||(12736532-12736618)
chr3 (188-253)||(43253844-43253909)
chr3 (209-254)||(52290961-52291006)
chr3 (188-268)||(33491064-33491144)
chr3 (252-296)||(38833880-38833924)
chr3 (174-250)||(45811727-45811803)
chr3 (252-296)||(54840128-54840172)
chr3 (186-253)||(34750565-34750632)
chr3 (209-268)||(51064820-51064879)
chr3 (188-250)||(1778714-1778776)
chr3 (188-253)||(11905891-11905956)
chr3 (192-253)||(17652817-17652878)
chr3 (188-253)||(37312019-37312084)
chr3 (188-253)||(37497561-37497626)
chr3 (175-236)||(40462398-40462459)
chr3 (209-250)||(45710922-45710963)
chr3 (209-250)||(54726557-54726598)
chr3 (252-296)||(10571144-10571188)
chr3 (174-254)||(14194623-14194703)
chr3 (252-296)||(21907213-21907257)
chr3 (252-292)||(37833121-37833161)
chr3 (187-250)||(51837939-51838002)
chr3 (246-292)||(7459814-7459860)
chr3 (251-293)||(34827473-34827515)
chr3 (188-250)||(37772945-37773007)
chr3 (188-253)||(8679035-8679100)
chr3 (161-250)||(19609371-19609460)
chr3 (209-250)||(24569102-24569143)
chr3 (188-253)||(30190641-30190706)
chr3 (188-249)||(34957576-34957637)
chr3 (188-253)||(38795413-38795478)
chr3 (209-250)||(43719338-43719379)
chr3 (252-293)||(48706846-48706887)
chr3 (188-253)||(50035198-50035263)
chr3 (252-292)||(8559005-8559045)
chr3 (252-296)||(10435336-10435380)
chr3 (252-296)||(17053081-17053125)
chr3 (252-292)||(18659273-18659313)
chr3 (178-250)||(19611980-19612052)
chr3 (188-252)||(27471405-27471469)
chr3 (252-296)||(29728098-29728142)
chr3 (252-296)||(45167516-45167560)
chr3 (252-296)||(51062607-51062651)
chr3 (209-249)||(53560290-53560330)
chr3 (195-250)||(37695654-37695709)
chr3 (187-253)||(11632150-11632215)
chr3 (246-296)||(27849153-27849203)
chr3 (188-250)||(28690763-28690825)
chr3 (188-250)||(31158503-31158564)
chr3 (246-284)||(34555380-34555418)
chr3 (204-250)||(54477457-54477502)
chr3 (188-253)||(36460397-36460462)
chr3 (252-296)||(4238494-4238538)
chr3 (209-253)||(23004384-23004428)
chr3 (252-296)||(32951136-32951180)
chr3 (247-279)||(50676746-50676778)
chr3 (252-292)||(52668486-52668526)
[»] scaffold0003 (2 HSPs)
scaffold0003 (188-268)||(252510-252590)
scaffold0003 (188-253)||(39157-39222)
[»] chr5 (49 HSPs)
chr5 (188-255)||(2588047-2588114)
chr5 (188-253)||(2232052-2232117)
chr5 (188-253)||(9515815-9515880)
chr5 (188-253)||(40530203-40530268)
chr5 (252-296)||(32002014-32002058)
chr5 (252-296)||(32334638-32334682)
chr5 (252-296)||(39894998-39895042)
chr5 (187-253)||(40899987-40900053)
chr5 (177-250)||(843509-843582)
chr5 (188-253)||(7827905-7827970)
chr5 (188-253)||(38508166-38508231)
chr5 (252-296)||(5364641-5364685)
chr5 (188-252)||(8698379-8698443)
chr5 (252-296)||(29627485-29627529)
chr5 (188-236)||(42922846-42922894)
chr5 (188-250)||(8724988-8725050)
chr5 (188-250)||(11796146-11796208)
chr5 (209-247)||(19930021-19930059)
chr5 (215-253)||(21060699-21060737)
chr5 (188-250)||(27542867-27542929)
chr5 (188-250)||(37184058-37184120)
chr5 (190-252)||(41478897-41478959)
chr5 (190-252)||(41492372-41492434)
chr5 (209-254)||(3348125-3348170)
chr5 (188-253)||(4818620-4818685)
chr5 (188-253)||(15818459-15818524)
chr5 (252-296)||(970355-970399)
chr5 (252-296)||(4299833-4299877)
chr5 (252-296)||(5212922-5212966)
chr5 (252-296)||(22613709-22613753)
chr5 (252-292)||(35447997-35448037)
chr5 (252-296)||(40512680-40512724)
chr5 (252-292)||(42148528-42148568)
chr5 (194-253)||(3076659-3076717)
chr5 (191-250)||(32440213-32440272)
chr5 (210-253)||(41062161-41062204)
chr5 (189-252)||(41496150-41496213)
chr5 (207-253)||(18890553-18890599)
chr5 (188-250)||(29570464-29570526)
chr5 (175-248)||(5282416-5282489)
chr5 (255-296)||(39036627-39036668)
chr5 (248-296)||(14475226-14475274)
chr5 (189-253)||(15439299-15439363)
chr5 (252-296)||(16048302-16048346)
chr5 (198-250)||(18841551-18841603)
chr5 (252-284)||(27675769-27675801)
chr5 (252-296)||(35290503-35290547)
chr5 (252-292)||(38698184-38698224)
chr5 (252-296)||(43067438-43067482)
[»] scaffold0110 (1 HSPs)
scaffold0110 (209-253)||(1773-1817)
[»] scaffold0188 (1 HSPs)
scaffold0188 (175-253)||(6806-6884)
[»] scaffold0182 (1 HSPs)
scaffold0182 (188-253)||(20334-20399)
[»] scaffold0007 (1 HSPs)
scaffold0007 (252-296)||(15216-15260)
[»] scaffold0011 (1 HSPs)
scaffold0011 (202-253)||(14165-14216)
[»] scaffold0330 (1 HSPs)
scaffold0330 (188-250)||(5462-5524)
[»] scaffold0464 (1 HSPs)
scaffold0464 (188-253)||(6266-6331)
[»] scaffold0095 (2 HSPs)
scaffold0095 (188-253)||(50273-50338)
scaffold0095 (209-237)||(22661-22689)
[»] scaffold0459 (1 HSPs)
scaffold0459 (260-296)||(12969-13005)
[»] scaffold0366 (2 HSPs)
scaffold0366 (260-296)||(10610-10646)
scaffold0366 (260-296)||(14276-14312)
[»] scaffold1391 (1 HSPs)
scaffold1391 (188-250)||(1798-1860)
[»] scaffold0302 (1 HSPs)
scaffold0302 (188-250)||(16170-16232)
[»] scaffold0012 (1 HSPs)
scaffold0012 (188-250)||(105756-105818)
[»] scaffold0328 (1 HSPs)
scaffold0328 (209-250)||(7983-8024)
[»] scaffold0159 (1 HSPs)
scaffold0159 (187-252)||(33999-34064)
[»] scaffold0027 (1 HSPs)
scaffold0027 (255-292)||(117542-117579)


Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-112; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 3 - 236
Target Start/End: Original strand, 4958413 - 4958646
Alignment:
Q  3 aaaaatggagatctccattatagatgttttaagggatggacatagtagtaaattaattgtatcctctctatcttatttgagtgttcattacctctctctt 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  4958413 aaaaatggagatctccattatagatgttttaagggatggacatagtagtaaattaattgtatcctctctatcttatttgactgttcattacctctctctt 4958512  T
Q  103 taatgttctcaataataaaaagattctaaaaccaataaaatatcaatattatgaaggcacttcatccgtcctaaaataacaattatttaaggtttgtgca 202  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||    
T  4958513 taatattctcaataataaaaagattctaaaaccaataaaatatcaatattataaatgtacttcatccgtcctaaaataacaattatttaaggtttgtgca 4958612  T
Q  203 taatttttaagaaaatgattaattgtgttgattt 236  Q
    |||||||||||||||||| ||||| |||||||||    
T  4958613 taatttttaagaaaatgaataattatgttgattt 4958646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 21759972 - 21760037
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21759972 tttaaggtttgtgcatgattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 21760037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 38391889 - 38391824
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38391889 tttaaggtttatgcacaattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 38391824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 83526 - 83461
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||| |||| |||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  83526 tttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaattagta 83461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 46211572 - 46211505
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagtact 255  Q
    |||||||||| |||| |||| ||||| ||||||||||||||||||||||||||||||||| |||||||    
T  46211572 tttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaactagtact 46211505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 759078 - 759144
Alignment:
Q  187 atttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||||||| |||| |||| ||||| ||||||||||||||||||||||||||||||||| |||||    
T  759078 atttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaactagta 759144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 3178192 - 3178254
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||||||||| ||| ||||| |||||||| |||||||||||||||||||||||||||    
T  3178192 tttaaggtttgtgcatgattattaagtaaatgattgattgtgttgattttgatggtaaaatta 3178254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 16904520 - 16904458
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||  || |||||||||    
T  16904520 tttaaggtttgtgcaaaatttttaagaaaatgattaattgtgttgatttcaatagtaaaatta 16904458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 251
Target Start/End: Complemental strand, 28103874 - 28103811
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattag 251  Q
    |||||||||||||||  ||| ||||||||||||||||||||||||||||  |||||||||||||    
T  28103874 tttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattag 28103811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 9786129 - 9786067
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||| ||||||  ||| ||||| ||||||||||||||||||||||||||||||||||||    
T  9786129 tttaaggtctgtgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaatta 9786067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 19073036 - 19072986
Alignment:
Q  246 aattagtactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  19073036 aattaatactccctccgtcccttaataaatgacccagttgacaatatacat 19072986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 4612086 - 4612131
Alignment:
Q  251 gtactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  4612086 gtactccctccgtcccttaataaatgacccagttgacaatatacat 4612131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 5524521 - 5524456
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||| |||||||||  ||| ||||||||||||||||||||||||||||  |||||||||||||||    
T  5524521 tttaaagtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagta 5524456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 42935781 - 42935740
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  42935781 ttaagaaaatgattaattgtgttgattttgatggtaaaatta 42935740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 48608999 - 48608938
Alignment:
Q  192 aggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||| ||||| ||| ||||| ||||||||||||||||||||||||||||||||| |||||    
T  48608999 aggtttatgcatgattattaaggaaatgattaattgtgttgattttgatggtaaaactagta 48608938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 26974170 - 26974108
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||||||||  ||| ||||| ||||||||||||||||||||||  ||||||||||||    
T  26974170 tttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaatta 26974108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 28202297 - 28202359
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||| ||||   || |||||||||| |||||||||||||||||||||||||||||||    
T  28202297 tttaaggtttatgcacggttattaagaaaataattaattgtgttgattttgatggtaaaatta 28202359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 8592428 - 8592493
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||| ||| ||||  ||||||||||||||||||||||  ||||| |||||||||    
T  8592428 tttaaggtttgtgcatgattattaaagaaatgattaattgtgttgatttcaatggttaaattagta 8592493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 11373416 - 11373481
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||| |||||||  ||| ||||| ||||| |||||||||||||||| ||||||||||||||||    
T  11373416 tttaaggattgtgcacgattattaaggaaatgtttaattgtgttgatttcgatggtaaaattagta 11373481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 27921129 - 27921064
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||  |||| | || |||||||||||||||||| |||||||||| |||||||||||||||    
T  27921129 tttaaggttgatgcacagttattaagaaaatgattaattatgttgattttaatggtaaaattagta 27921064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 40076456 - 40076391
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||| ||||  ||| ||||  ||||||||||||||||| |||||||||||||||||||||    
T  40076456 tttaaggtttatgcacgattattaaagaaatgattaattgtgttaattttgatggtaaaattagta 40076391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 44180346 - 44180281
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||| | ||  ||| ||||||||||||||||||||||||||||  |||||||||||||||    
T  44180346 tttaaggtttatacacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagta 44180281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 44424255 - 44424214
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  44424255 ttaaggaaatgattaattgtgttgattttgatggtaaaatta 44424214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 31466358 - 31466402
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||||||||||||||| |||| |||||||||||    
T  31466358 tactccctccgtcccttaataaatgacctagttgacaatatacat 31466402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 36905787 - 36905743
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||| |||||||||||||||| |||||||||||    
T  36905787 tactccctccgtccctaaataaatgacccagttgacaatatacat 36905743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 41506054 - 41506118
Alignment:
Q  189 ttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||||| ||||  ||| ||||| ||||||||||||||||| ||||| |||||||||||||||    
T  41506054 ttaaggtttatgcacgattattaaggaaatgattaattgtgttaattttaatggtaaaattagta 41506118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 47713502 - 47713546
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||    
T  47713502 tactccctctgtcccttaataaatgacccagttgacaatatacat 47713546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 7457406 - 7457473
Alignment:
Q  185 ttatttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagt 252  Q
    |||||||| |||||||||  ||| |||| ||||||||||||| |||||||||  ||||||||||||||    
T  7457406 ttatttaatgtttgtgcacgattattaaaaaaatgattaattatgttgatttcaatggtaaaattagt 7457473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 247
Target Start/End: Complemental strand, 21390436 - 21390377
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaa 247  Q
    |||||||||| ||||  ||| ||||| ||||||||||||||||| |||||||||||||||    
T  21390436 tttaaggtttatgcacgattattaaggaaatgattaattgtgttaattttgatggtaaaa 21390377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 43874037 - 43874002
Alignment:
Q  215 aaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||||||||||||||||||||||||||||||||||    
T  43874037 aaatgattaattgtgttgattttgatggtaaaatta 43874002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 16560557 - 16560623
Alignment:
Q  187 atttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||| ||| ||||  ||| ||||| ||||||||||||||||| ||||||||||||||| |||||    
T  16560557 atttaagatttatgcacgattattaaggaaatgattaattgtgtttattttgatggtaaaactagta 16560623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 16605105 - 16605039
Alignment:
Q  187 atttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||| ||| ||||  ||| ||||| ||||||||||||||||| ||||||||||||||| |||||    
T  16605105 atttaagatttatgcacgattattaaggaaatgattaattgtgtttattttgatggtaaaactagta 16605039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 34947641 - 34947579
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||||||||||||||  || ||||  ||||||||||||||||||||||  ||||||||||||    
T  34947641 tttaaggtttgtgcatgtttattaaagaaatgattaattgtgttgatttcaatggtaaaatta 34947579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 24516277 - 24516342
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||| | ||  ||| |||| |||||||||||||||||||||||  |||||||||||||||    
T  24516277 tttaaggtttatacacgattattaataaaatgattaattgtgttgatttcaatggtaaaattagta 24516342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 252
Target Start/End: Complemental strand, 2459610 - 2459546
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagt 252  Q
    ||||| |||||||||  ||| ||||| ||||||||||||||||||||||  | ||||||||||||    
T  2459610 tttaatgtttgtgcacgattattaaggaaatgattaattgtgttgatttcaacggtaaaattagt 2459546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 10464115 - 10464159
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||| ||||||||||| |||| |||||||||||    
T  10464115 tactccctccgtccctcaataaatgacctagttgacaatatacat 10464159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 23473969 - 23474013
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||| ||||||||||||||||||||| |||| |||||||||||    
T  23473969 tactccatccgtcccttaataaatgacctagttgacaatatacat 23474013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 31110886 - 31110842
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||| ||||||||| |||||| |||||||||||    
T  31110886 tactccctccgtccctaaataaatgatccagttgacaatatacat 31110842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 33819334 - 33819290
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||| ||||||||||||||||||||||  |||||||||||||||    
T  33819334 ttaaggaaatgattaattgtgttgatttcaatggtaaaattagta 33819290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 34100556 - 34100600
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||||||||||||||||||||||||  || ||||||||||||    
T  34100556 ttaagaaaatgattaattgtgttgatttcaatagtaaaattagta 34100600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 34478008 - 34478052
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||| ||||||||||| |||| |||||||||||    
T  34478008 tactccctccgtccctcaataaatgacctagttgacaatatacat 34478052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 36819957 - 36819917
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  36819957 tactccctccgtcccttaataaatgacctagttgacaatat 36819917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 37950945 - 37950985
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  37950945 tactccctccgtcccttaataaatgacctagttgacaatat 37950985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 47081241 - 47081201
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  47081241 tactccctccgtcccttaataaatgacctagttgacaatat 47081201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 48531583 - 48531539
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||||| |||||| |||| |||||||||||    
T  48531583 tactccctccgtcccttaatagatgacctagttgacaatatacat 48531539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 13962101 - 13962038
Alignment:
Q  187 atttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||||||||| ||||   || ||||| ||||||||||||||||||||||| ||| ||||||||    
T  13962101 atttaaggtttatgcacgtttattaaggaaatgattaattgtgttgattttaatgataaaatta 13962038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 292
Target Start/End: Original strand, 36859205 - 36859248
Alignment:
Q  249 tagtactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    ||||||||||||||||||||||||||||||  |||| |||||||    
T  36859205 tagtactccctccgtcccttaataaatgacttagttgacaatat 36859248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 2850869 - 2850931
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||| ||||||||||| ||| ||||| |||||||||||| |||||||||  ||| ||||||||    
T  2850869 tttatggtttgtgcatgattattaaggaaatgattaattatgttgatttcaatgataaaatta 2850931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 12631447 - 12631381
Alignment:
Q  187 atttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||||||||||||  ||| ||||| |||| ||||||||| |||||||  || ||||||||||||    
T  12631447 atttaaggtttgtgcacgattattaaggaaataattaattgtattgatttcaatagtaaaattagta 12631381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 19060389 - 19060451
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||| ||||||| |||||||| ||  ||||||||||||||||||||||  || |||||||||    
T  19060389 tttaaagtttgtgtataattttgaaagaaatgattaattgtgttgatttaaattgtaaaatta 19060451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 23670626 - 23670565
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||||||||||||| |||| |||||  ||| |||||||||||||||||  ||||||||||||    
T  23670626 tttaaggtttgtgcacaattattaagggaat-attaattgtgttgatttccatggtaaaatta 23670565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 284
Target Start/End: Original strand, 32972136 - 32972170
Alignment:
Q  250 agtactccctccgtcccttaataaatgacccagtt 284  Q
    ||||||||||||||||||||||||||||| |||||    
T  32972136 agtactccctccgtcccttaataaatgacacagtt 32972170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 49101807 - 49101745
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||||||||||  |  ||||||||||||||||||||||||||| ||||| | | ||||||||    
T  49101807 tttaaggtttgtttacgatttttaagaaaatgattaattgtgtttattttaaggataaaatta 49101745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 7463354 - 7463289
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||| |||||||   || ||||| ||||||||||||||||||||||  ||| |||||||||||    
T  7463354 tttaaggattgtgcacggttattaaggaaatgattaattgtgttgatttcaatgataaaattagta 7463289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 22738842 - 22738777
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||| ||||  ||| ||||  |||||||||||||||| |||||  |||||||||||||||    
T  22738842 tttaaggtttatgcacgattattaaagaaatgattaattgtgtagatttcaatggtaaaattagta 22738777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 29835402 - 29835467
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||||||||||    || ||||| |||||||||||| |||||||||  |||||||||||||||    
T  29835402 tttaaggtttgtgcgcgcttattaaggaaatgattaattatgttgatttaaatggtaaaattagta 29835467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 284
Target Start/End: Original strand, 31110616 - 31110656
Alignment:
Q  244 aaaattagtactccctccgtcccttaataaatgacccagtt 284  Q
    |||||||| ||||||||||||||| ||||||||||| ||||    
T  31110616 aaaattagcactccctccgtccctaaataaatgacctagtt 31110656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 35500747 - 35500791
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||| ||||| ||||| |||| |||||||||||    
T  35500747 tactccctccgtccctcaataattgacctagttgacaatatacat 35500791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 37231563 - 37231607
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||| |||||| |||| |||| |||||||||||    
T  37231563 tactccctccgtccctcaataaacgacctagttgacaatatacat 37231607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 42834292 - 42834332
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||||||| |||  |||||||    
T  42834292 tactccctccgtcccttaataaatgacctagtcgacaatat 42834332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 47538184 - 47538140
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||| ||||||||| |||||| |||| |||||||||||    
T  47538184 tactccctccgccccttaatagatgacctagttgacaatatacat 47538140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 8e-24; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 188 - 256
Target Start/End: Original strand, 29226213 - 29226281
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagtactc 256  Q
    |||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29226213 tttaagatttatgcataattattaagaaaatgattaattgtgttgattttgatggtaaaattagtactc 29226281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 32678831 - 32678776
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaattagtactccctccgtc 264  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  32678831 ttaaggaaatgattaattgtgttgattttgatggtaaaactagtactccctccgtc 32678776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 21216083 - 21216147
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagt 252  Q
    |||||||||||||||| ||| ||||| ||||||||||||||||||||||  ||||||||||||||    
T  21216083 tttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagt 21216147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 36967495 - 36967433
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||| ||||  ||| ||||| ||||||||||||||||||||||||||||||||||||    
T  36967495 tttaaggtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaatta 36967433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 39329154 - 39329088
Alignment:
Q  187 atttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||| |||||| | |||||||||||||||||||||||||||| ||||| ||| |||||||||||    
T  39329154 atttaagttttgtgtacaatttttaagaaaatgattaattgtgttaattttaatgataaaattagta 39329088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 45425648 - 45425710
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||| ||| ||||| ||| ||||||||||||||||||||||||||||| ||||||||||||    
T  45425648 tttaagttttatgcatgattattaagaaaatgattaattgtgttgattttaatggtaaaatta 45425710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 1875574 - 1875639
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||  ||| ||||| ||||||||||||||||||||||  |||||||||||||||    
T  1875574 tttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 1875639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 13335350 - 13335285
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||| ||||  ||| ||||| ||||| |||||||||||||||||||||||||||||||||    
T  13335350 tttaaggtttatgcacgattattaaggaaatggttaattgtgttgattttgatggtaaaattagta 13335285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 3293101 - 3293145
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  3293101 tactccctccgtcccttaataaatgacccagttgacaatatacat 3293145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 34393957 - 34394001
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  34393957 ttaaggaaatgattaattgtgttgattttgatggtaaaattagta 34394001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 40996347 - 40996411
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagt 252  Q
    |||||||||| |||| |||| ||||| |||||||||||||||||||||||||  |||||||||||    
T  40996347 tttaaggtttatgcacaattgttaaggaaatgattaattgtgttgattttgaatgtaaaattagt 40996411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 296
Target Start/End: Complemental strand, 30380794 - 30380747
Alignment:
Q  249 tagtactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||    
T  30380794 tagtactccctccgtcccttaataaatgatccagttgacaatatacat 30380747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 250
Target Start/End: Original strand, 42972489 - 42972552
Alignment:
Q  187 atttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||||||||||||||  ||| |||||||||||||||||||| |||||||  ||||||||||||    
T  42972489 atttaaggtttgtgcacgattattaagaaaatgattaattgttttgatttcaatggtaaaatta 42972552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 208 - 250
Target Start/End: Original strand, 5053155 - 5053197
Alignment:
Q  208 tttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  5053155 tttaaggaaatgattaattgtgttgattttgatggtaaaatta 5053197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 10097973 - 10098035
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||  |||||  || |||||||||||||||||||| |||||||||||||||||||||    
T  10097973 tttaaggttgatgcatggttattaagaaaatgattaattgtattgattttgatggtaaaatta 10098035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 31271155 - 31271093
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||||||||||| |  ||| |||||||||||||| |||||||||||||| ||||||||||||    
T  31271155 tttaaggtttgtgtacgattattaagaaaatgattgattgtgttgattttaatggtaaaatta 31271093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 33765794 - 33765732
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||||||||||||| |||||||||| |||||||||||| |||||||||| ||  ||||||||    
T  33765794 tttaaggtttgtgcacaatttttaaggaaatgattaattatgttgattttaatactaaaatta 33765732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 254 - 296
Target Start/End: Complemental strand, 38845866 - 38845824
Alignment:
Q  254 ctccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  38845866 ctccctccgtcccttaataaatgacccagttgacaatatacat 38845824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 51246 - 51197
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgatttt 237  Q
    |||||||||||||||  ||| |||||||||||||||||||||||||||||    
T  51246 tttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttt 51197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 26626094 - 26626155
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatt 249  Q
    |||||||||| ||||  ||| ||||| ||||||||||||||||||| |||||||||||||||    
T  26626094 tttaaggtttatgcacgattattaaggaaatgattaattgtgttgaatttgatggtaaaatt 26626155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 39482749 - 39482684
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||| ||||||||  ||| ||||||||||||||||||||||||||||  | |||||||||||||    
T  39482749 tttaagatttgtgcacgattattaagaaaatgattaattgtgttgatttcaagggtaaaattagta 39482684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 190 - 262
Target Start/End: Complemental strand, 1739772 - 1739700
Alignment:
Q  190 taaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagtactccctccg 262  Q
    ||||||||||| |  ||| ||||| |||| |||||||||||||||||  |||||||||||||||| |||||||    
T  1739772 taaggtttgtgtacgattattaaggaaataattaattgtgttgatttcaatggtaaaattagtacaccctccg 1739700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 2767294 - 2767338
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||    
T  2767294 ttaaggaaataattaattgtgttgattttgatggtaaaattagta 2767338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 21649307 - 21649367
Alignment:
Q  175 aaaataacaattatttaaggtttgtgcataatttttaagaaaatgattaattgtgttgatt 235  Q
    ||||||| |||| ||||||||||||| | |||||||||||||||| |||||| ||||||||    
T  21649307 aaaataataattgtttaaggtttgtgtacaatttttaagaaaatgtttaattatgttgatt 21649367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 22771817 - 22771881
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagt 252  Q
    |||||||||| |||| | || ||||| || |||||||||| ||||||||||||||||||||||||    
T  22771817 tttaaggtttatgcacagttattaaggaattgattaattgggttgattttgatggtaaaattagt 22771881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 4428334 - 4428395
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||| || ||| |||||||||||||||||| ||||||||||||| ||| ||||||||    
T  4428334 tttaaggtttatgtata-tttttaagaaaatgattatttgtgttgattttaatgataaaatta 4428395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 8350874 - 8350924
Alignment:
Q  246 aattagtactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||| |||||||||| ||||||||||||||||| |||| |||||||||||    
T  8350874 aattaatactccctccatcccttaataaatgacctagttgacaatatacat 8350924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 9300095 - 9300157
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||| ||||  ||| ||||||||||||||  ||||||||||||| ||||||||||||    
T  9300095 tttaaggtttatgcacgattattaagaaaatgattgtttgtgttgattttaatggtaaaatta 9300157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 296
Target Start/End: Complemental strand, 37710162 - 37710116
Alignment:
Q  250 agtactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||| |||||||||||||||||||| ||||| |||||||||||    
T  37710162 agtactccatccgtcccttaataaatgactcagttgacaatatacat 37710116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 249
Target Start/End: Complemental strand, 39329431 - 39329370
Alignment:
Q  187 atttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatt 249  Q
    ||||||| |||||||| ||||||||||||| |||||||||||||||||||  ||| |||||||    
T  39329431 atttaagttttgtgcacaatttttaagaaa-tgattaattgtgttgatttcaatgataaaatt 39329370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 7173048 - 7172983
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||||||||| || ||| ||||  ||||||||||||||||||||||  ||| |||||||||||    
T  7173048 tttaaggtttgtgtatcattattaaagaaatgattaattgtgttgatttcaatgataaaattagta 7172983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 10179929 - 10179994
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||  ||| |||||||||||| || |||| |||||||  |||||||||||||||    
T  10179929 tttaaggtttgtgcacgattattaagaaaatgagtagttgtattgatttcaatggtaaaattagta 10179994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 292
Target Start/End: Complemental strand, 30290186 - 30290145
Alignment:
Q  251 gtactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    ||||||||||||||||||||||||||||| |||| |||||||    
T  30290186 gtactccctccgtcccttaataaatgacctagttgacaatat 30290145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 34948669 - 34948734
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||| ||||| || |||| ||||| ||||||||||||||||||||||  || ||||||||||||    
T  34948669 tttaagatttgtacacaattattaaggaaatgattaattgtgttgatttaaatagtaaaattagta 34948734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 39405896 - 39405831
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||  ||| ||||| ||||||||||||||||| ||||  ||| |||||||||||    
T  39405896 tttaaggtttgtgcacgattattaaggaaatgattaattgtgttaatttcaatgataaaattagta 39405831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 2805476 - 2805516
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  2805476 tactccctccgtcccttaataaatgacctagttgacaatat 2805516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 2986586 - 2986542
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||||||||||||||  |||| |||||||||||    
T  2986586 tactccctccgtcccttaataaatgacttagttgacaatatacat 2986542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 14522640 - 14522596
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||||| |||||| |||| |||||||||||    
T  14522640 tactccctccgtcccttaatagatgacctagttgacaatatacat 14522596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 18809537 - 18809493
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||| ||||||||||| |||| |||||||||||    
T  18809537 tactccctccgtccctcaataaatgacctagttgacaatatacat 18809493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 23249113 - 23249073
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  23249113 tactccctccgtcccttaataaatgacctagttgacaatat 23249073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 43066387 - 43066343
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||||||||||||||| |||  |||||||||||    
T  43066387 tactccctccgtcccttaataaatgacctagtcgacaatatacat 43066343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 45082073 - 45082033
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  45082073 tactccctccgtcccttaataaatgacctagttgacaatat 45082033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 253
Target Start/End: Original strand, 4924060 - 4924114
Alignment:
Q  199 tgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||| ||||||||||||| |||| ||||||  ||||| |||||||||||||||    
T  4924060 tgcatagtttttaagaaaattattagttgtgtatattttaatggtaaaattagta 4924114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 14854916 - 14854978
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||||| ||  ||| | |||||||||| | |||||||||||||| ||||||||||||    
T  14854916 tttaaggtttgtacacgattatcaagaaaatgaatcattgtgttgattttaatggtaaaatta 14854978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 253
Target Start/End: Original strand, 44761503 - 44761541
Alignment:
Q  215 aaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  44761503 aaatgattaattgtgttgatttcaatggtaaaattagta 44761541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 6471107 - 6471062
Alignment:
Q  251 gtactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||| ||||||||||| |||||| |||| |||||||||||    
T  6471107 gtactccctctgtcccttaatagatgacctagttgacaatatacat 6471062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 11976918 - 11976983
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||| ||| ||| | |||| |||||||||||||||||  |||||| ||| ||||    
T  11976918 tttaaggtttgtgcatgattattatggaaatcattaattgtgttgatttcaatggtataatcagta 11976983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 17719240 - 17719305
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||| ||||||||  ||| |||| |||||||||||||||  ||||||| |||||||| ||||||    
T  17719240 tttaagatttgtgcacgattattaaaaaaatgattaattgtaatgattttaatggtaaagttagta 17719305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 31127805 - 31127846
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatata 293  Q
    |||||||||||||||| ||||||||||| |||| ||||||||    
T  31127805 tactccctccgtccctcaataaatgacctagttgacaatata 31127846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 31231843 - 31231802
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||| ||||||| |||||||| |||||||||||||||||||    
T  31231843 ttaaggaaatgatgaattgtgtcgattttgatggtaaaatta 31231802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 293
Target Start/End: Complemental strand, 38739918 - 38739877
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatata 293  Q
    ||||||||||||||  ||||||||||||||||| ||||||||    
T  38739918 tactccctccgtccggtaataaatgacccagttgacaatata 38739877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 296
Target Start/End: Complemental strand, 40013909 - 40013868
Alignment:
Q  255 tccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||| |||||||| ||||| |||||||||||    
T  40013909 tccctccgtcccttagtaaatgactcagttgacaatatacat 40013868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 2805737 - 2805705
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagtt 284  Q
    |||||||||||||||| ||||||||||||||||    
T  2805737 tactccctccgtccctaaataaatgacccagtt 2805705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 284
Target Start/End: Original strand, 21132720 - 21132760
Alignment:
Q  244 aaaattagtactccctccgtcccttaataaatgacccagtt 284  Q
    |||| ||||||||||||||||||||||||| |||| |||||    
T  21132720 aaaaatagtactccctccgtcccttaataagtgacacagtt 21132760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 29791203 - 29791163
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||| ||||||||||||||||||| |||| |||||||    
T  29791203 tactccctacgtcccttaataaatgacctagttgacaatat 29791163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 252
Target Start/End: Complemental strand, 31082753 - 31082689
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagt 252  Q
    |||| ||||||||||  ||  ||||| |||||||||||||| |||||||| ||| ||||||||||    
T  31082753 tttatggtttgtgcacgataattaaggaaatgattaattgtcttgattttaatgataaaattagt 31082689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 34455684 - 34455728
Alignment:
Q  205 atttttaagaaaatgattaattgtgttgattttgatggtaaaatt 249  Q
    ||||||||| |||||| |||||||||||||||| ||| |||||||    
T  34455684 atttttaaggaaatgactaattgtgttgattttaatgataaaatt 34455728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 237
Target Start/End: Original strand, 39465812 - 39465840
Alignment:
Q  209 ttaagaaaatgattaattgtgttgatttt 237  Q
    |||||||||||||||||||||||||||||    
T  39465812 ttaagaaaatgattaattgtgttgatttt 39465840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 40013651 - 40013683
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagtt 284  Q
    |||||||||||||||||||||||||||| ||||    
T  40013651 tactccctccgtcccttaataaatgacctagtt 40013683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 35367650 - 35367705
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaattagtactccctccgtc 264  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35367650 ttaagaaaatgattaattgtgttgattttgatggtaaaattagtactccctccgtc 35367705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 21909990 - 21910055
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||| |||| |||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  21909990 tttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaattagta 21910055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 31042932 - 31042866
Alignment:
Q  187 atttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||||||||||||| ||| ||||| ||||||||||||||||||||||  |||||||||||||||    
T  31042932 atttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 31042866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 16395031 - 16395096
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||| ||||  ||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  16395031 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgattttgatagtaaaattagta 16395096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 49223992 - 49224035
Alignment:
Q  210 taagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  49223992 taagaaaatgattaattgtgttgattttgatggtaaaattagta 49224035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 12039216 - 12039151
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||  ||| ||||| ||||||||||||||||||||||  |||||||||||||||    
T  12039216 tttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 12039151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 40144852 - 40144893
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  40144852 ttaagaaaatgattaattgtgttgattttgatggtaaaatta 40144893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 26093528 - 26093466
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||| ||||||||  ||| ||||||||||||||||||||||||||||  ||||||||||||    
T  26093528 tttaagatttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaatta 26093466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 27687375 - 27687313
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||||||||||||| |||| |||| |||||||||| ||||||||||||  ||||||||||||    
T  27687375 tttaaggtttgtgcacaattattaaaaaaatgattagttgtgttgatttcaatggtaaaatta 27687313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 28749126 - 28749060
Alignment:
Q  187 atttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||| ||||||||  ||| ||||| ||||||||||||||||||||||  |||||||||||||||    
T  28749126 atttaagatttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 28749060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 37506240 - 37506194
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaattagtact 255  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||    
T  37506240 ttaaggaaatgattaattgtgttgattttgatgataaaattagtact 37506194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 250 - 296
Target Start/End: Complemental strand, 38458993 - 38458947
Alignment:
Q  250 agtactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||    
T  38458993 agtactccctccatcccttaataaatgacccagttgacaatatacat 38458947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 1849963 - 1849918
Alignment:
Q  251 gtactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||    
T  1849963 gtactccatccgtcccttaataaatgacccagttgacaatatacat 1849918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 6267840 - 6267905
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||  ||||||||  ||||||||||||||||||||||| ||| ||||| |||||    
T  6267840 tttaaggtttgtgcactatttttaaagaaatgattaattgtgttgattttaatgataaaactagta 6267905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 23168977 - 23169042
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||| |||||||||  ||| |||||||||| |||||||||||||||||  |||||||||||||||    
T  23168977 tttaaagtttgtgcacgattattaagaaaataattaattgtgttgatttcaatggtaaaattagta 23169042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 38787475 - 38787410
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||| ||||  ||| ||||| |||||||| |||||||||||||||||||||||| |||||    
T  38787475 tttaaggtttatgcacgattattaaggaaatgattgattgtgttgattttgatggtaaaactagta 38787410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 39864245 - 39864180
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||| |||||||||  ||| ||||| ||||||||||||||||||||||  |||||||||||||||    
T  39864245 tttaaagtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 39864180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 42410107 - 42410066
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  42410107 ttaaaaaaatgattaattgtgttgattttgatggtaaaatta 42410066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 253
Target Start/End: Original strand, 6160460 - 6160508
Alignment:
Q  205 atttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||||||||||||||||||||||||||||  ||| |||||||||||    
T  6160460 atttttaagaaaatgattaattgtgttgatttcaatgataaaattagta 6160508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 15699230 - 15699194
Alignment:
Q  214 aaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||||||||||||||||||||||||||||||    
T  15699230 aaaatgattaattgtgttgattttgatggtaaaatta 15699194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 20209845 - 20209889
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  20209845 ttaagaaaatgattaattatgttgattttgatagtaaaattagta 20209889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 25532039 - 25531995
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||||||||||||||| |||| |||||||||||    
T  25532039 tactccctccgtcccttaataaatgacctagttgacaatatacat 25531995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 30529050 - 30529094
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||||||||||||||| |||| |||||||||||    
T  30529050 tactccctccgtcccttaataaatgacctagttgacaatatacat 30529094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 32988349 - 32988393
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||||||||||||| |||||| |||||||||||    
T  32988349 tactccctccgtcccttaataaatgatccagttgacaatatacat 32988393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 37276574 - 37276530
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||    
T  37276574 ttaaggaaatgattaactgtgttgattttgatggtaaaattagta 37276530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 249
Target Start/End: Complemental strand, 41080731 - 41080671
Alignment:
Q  189 ttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatt 249  Q
    ||||||||| ||||| | |||||| |||||||||||||||||||||||| || ||||||||    
T  41080731 ttaaggtttatgcatgaattttaaaaaaatgattaattgtgttgattttaatagtaaaatt 41080671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 251
Target Start/End: Original strand, 41121836 - 41121872
Alignment:
Q  215 aaatgattaattgtgttgattttgatggtaaaattag 251  Q
    |||||||||||||||||||||||||||||||||||||    
T  41121836 aaatgattaattgtgttgattttgatggtaaaattag 41121872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 43500768 - 43500832
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagt 252  Q
    |||||||||| ||||  ||| ||||| |||| ||||||||||||||||||||||||| |||||||    
T  43500768 tttaaggtttatgcacgattattaaggaaattattaattgtgttgattttgatggtataattagt 43500832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 49805252 - 49805296
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||| |||||||||||||||||||| |||||||||||    
T  49805252 tactccctccgttccttaataaatgacccagttgacaatatacat 49805296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 50539521 - 50539477
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||    
T  50539521 tactccctccgtcccttaataaatgactcagttgacaatatacat 50539477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 24881015 - 24880948
Alignment:
Q  183 aattatttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||| |||||||||||||||||| ||| | |||||||| ||| |||||||||  ||||||||||||    
T  24881015 aattatgtaaggtttgtgcataattattacggaaatgattgattatgttgatttcaatggtaaaatta 24880948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 4441587 - 4441649
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||| |||||||||  || |||||||||| |||||||||| ||||||| ||||||||||||    
T  4441587 tttaagatttgtgcatctttattaagaaaataattaattgtggtgattttaatggtaaaatta 4441649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 253
Target Start/End: Complemental strand, 10495977 - 10495907
Alignment:
Q  183 aattatttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||| |||||||||| || |  ||| |||| ||||| ||||||| ||||||||||||||||||||||||||    
T  10495977 aattgtttaaggtttatgtaagattattaaaaaaattattaattttgttgattttgatggtaaaattagta 10495907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 13579604 - 13579658
Alignment:
Q  187 atttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatg 241  Q
    ||||||||||| ||||| ||| ||||  |||||||||||||||||||||||||||    
T  13579604 atttaaggtttatgcatgattattaaagaaatgattaattgtgttgattttgatg 13579658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 31154243 - 31154197
Alignment:
Q  207 ttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||| |||||||||||||||||||||||| ||| |||||||||||    
T  31154243 ttttaataaaatgattaattgtgttgattttaatgataaaattagta 31154197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 31978636 - 31978698
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||| |||||||||  ||| ||||||||| ||||||||||||||||||  ||||||||||||    
T  31978636 tttaaagtttgtgcacgattattaagaaaaagattaattgtgttgatttcaatggtaaaatta 31978698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 34031511 - 34031573
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||||||||| ||| ||||| ||||||||| |||||||||||   ||||||||||||    
T  34031511 tttaaggtttgtgcatgattattaaggaaatgattacttgtgttgattccaatggtaaaatta 34031573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 43614512 - 43614466
Alignment:
Q  207 ttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||| |||||||||| |||||||||||| |||||||||||||||    
T  43614512 ttttaaggaaatgattaagtgtgttgattttaatggtaaaattagta 43614466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 23393498 - 23393461
Alignment:
Q  247 attagtactccctccgtcccttaataaatgacccagtt 284  Q
    |||||||||||||||||||||||||||||||| |||||    
T  23393498 attagtactccctccgtcccttaataaatgacacagtt 23393461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 45331454 - 45331413
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||| ||||||| |||||||||||||||||||||||    
T  45331454 ttaagaaaataattaattatgttgattttgatggtaaaatta 45331413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 3898571 - 3898615
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||| ||||||||||| |||| |||||||||||    
T  3898571 tactccctccgtccctcaataaatgacctagttgacaatatacat 3898615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 7352420 - 7352380
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgt 228  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  7352420 tttaaggtttgtgtattatttttaagaaaatgattaattgt 7352380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 16265294 - 16265250
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||| ||||||||||| |||| |||||||||||    
T  16265294 tactccctccgtccctcaataaatgacctagttgacaatatacat 16265250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 16266423 - 16266379
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||| ||||||||||| |||| |||||||||||    
T  16266423 tactccctccgtccctcaataaatgacctagttgacaatatacat 16266379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 26441895 - 26441851
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||| ||||||||||| |||| |||||||||||    
T  26441895 tactccctccgtccctcaataaatgacctagttgacaatatacat 26441851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 32825997 - 32826040
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||    
T  32825997 ttaaggaaatgattaat-gtgttgattttgatggtaaaattagta 32826040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 36702054 - 36701990
Alignment:
Q  189 ttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||||| |||  | |||||||| |||||||||||| |||||||||  |||||||||||||||    
T  36702054 ttaaggtttttgcgaactttttaaggaaatgattaattatgttgatttcaatggtaaaattagta 36701990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 36718158 - 36718094
Alignment:
Q  189 ttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||||| |||  | |||||||| |||||||||||| |||||||||  |||||||||||||||    
T  36718158 ttaaggtttttgcgaactttttaaggaaatgattaattatgttgatttcaatggtaaaattagta 36718094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 43680331 - 43680287
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||| ||||||||||| |||| |||||||||||    
T  43680331 tactccctccgtccctcaataaatgacctagttgacaatatacat 43680287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 45234849 - 45234893
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||| |||||||||||||| |||| |||||||||||    
T  45234849 tactccctccgtctcttaataaatgacctagttgacaatatacat 45234893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 48264811 - 48264851
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  48264811 tactccctccgtcccttaataaatgacctagttgacaatat 48264851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 50876625 - 50876585
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  50876625 tactccctccgtcccttaataaatgacctagttgacaatat 50876585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 253
Target Start/End: Complemental strand, 27897083 - 27897024
Alignment:
Q  194 gtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||| ||||||||| |||| |||||  ||||||||||| ||| |||||||||||    
T  27897083 gtttgtgcatgatttttaaggaaataattaaacgtgttgattttaatgataaaattagta 27897024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 250
Target Start/End: Complemental strand, 29074999 - 29074956
Alignment:
Q  207 ttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||| |||||||||| ||||||||||||| ||||||||||||    
T  29074999 ttttaaaaaaatgattagttgtgttgattttaatggtaaaatta 29074956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 917158 - 917096
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||||||||  ||| ||||  |||||||||||| |||||||||  ||||||||||||    
T  917158 tttaaggtttgtgcacgattattaaataaatgattaattatgttgatttaaatggtaaaatta 917096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 3312246 - 3312180
Alignment:
Q  187 atttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||| |||||  |||||||| ||  ||||||||||||||||||||||| ||| | |||||||||    
T  3312246 atttaagatttgtatataattttaaaagaaatgattaattgtgttgattttaatgattaaattagta 3312180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 11450017 - 11449955
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||||||||  ||| ||||| ||||| |||||| |||||||||  ||||||||||||    
T  11450017 tttaaggtttgtgcacgattattaaggaaatggttaattatgttgatttcaatggtaaaatta 11449955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 24991637 - 24991699
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||||| ||  ||| ||||| ||||||||||||||||||||||  | ||||||||||    
T  24991637 tttaaggtttgtacacgattattaaggaaatgattaattgtgttgatttcaacggtaaaatta 24991699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 8896337 - 8896378
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||||||| |||||||||||||  ||||||||||||    
T  8896337 ttaagaaaatgattgattgtgttgatttcaatggtaaaatta 8896378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 279
Target Start/End: Complemental strand, 28037003 - 28036974
Alignment:
Q  250 agtactccctccgtcccttaataaatgacc 279  Q
    ||||||||||||||||||||||||||||||    
T  28037003 agtactccctccgtcccttaataaatgacc 28036974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 30754925 - 30754986
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatt 249  Q
    |||||| ||| ||||  ||| ||||| ||||||||||||||||||||||| | |||||||||    
T  30754925 tttaagatttatgcacgattattaaggaaatgattaattgtgttgattttaagggtaaaatt 30754986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 32970572 - 32970613
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||||||||||||||||||||||||||  ||| ||||||||    
T  32970572 ttaagaaaatgattaattgtgttgatttcaatgataaaatta 32970613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 34332470 - 34332421
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgatttt 237  Q
    |||||||||| || |  |||||||||||||| ||||||||||||||||||    
T  34332470 tttaaggtttctgtaagatttttaagaaaataattaattgtgttgatttt 34332421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 4605260 - 4605216
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||||| |||||| | || |||||||||||    
T  4605260 tactccctccgtcccttaatagatgacctatttgacaatatacat 4605216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 4659891 - 4659843
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattt 236  Q
    |||| ||||| ||||| | | ||||||||||||||||||||||||||||    
T  4659891 tttagggtttatgcatgaatattaagaaaatgattaattgtgttgattt 4659843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 5179383 - 5179431
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattt 236  Q
    |||||||||||| ||  ||| |||| |||||||||||||||||||||||    
T  5179383 tttaaggtttgtacacgattcttaacaaaatgattaattgtgttgattt 5179431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 29162104 - 29162060
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||||||| || | |||| |||||||||||    
T  29162104 tactccctccgtcccttaataaacgatctagttgacaatatacat 29162060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 35538761 - 35538729
Alignment:
Q  204 aatttttaagaaaatgattaattgtgttgattt 236  Q
    ||||||||||||||| |||||||||||||||||    
T  35538761 aatttttaagaaaattattaattgtgttgattt 35538729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 253
Target Start/End: Complemental strand, 37178005 - 37177914
Alignment:
Q  161 acttcatccgtcctaaaataacaattatttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||| ||||  ||||||| ||||||||||| || ||| |  |||||||||||||  ||||||||  |||||||| ||| |||||||||||    
T  37178005 acttcattcgtctcaaaataataattatttaagatt-gtgtacgatttttaagaaaacaattaattgcattgattttaatgataaaattagta 37177914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 39354264 - 39354296
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagtt 284  Q
    |||||||||||||||||||||||||||| ||||    
T  39354264 tactccctccgtcccttaataaatgacctagtt 39354296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 41855529 - 41855561
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagtt 284  Q
    ||||||||||||||||||||||||||| |||||    
T  41855529 tactccctccgtcccttaataaatgacacagtt 41855561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 42708761 - 42708721
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||| ||||||||||||||||||||| |||| |||||||    
T  42708761 tactccatccgtcccttaataaatgacctagttgacaatat 42708721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 52379250 - 52379210
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||| ||||||||||||| |||| |||||||    
T  52379250 tactccctccgtcctttaataaatgacctagttgacaatat 52379210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 188 - 252
Target Start/End: Complemental strand, 7072294 - 7072230
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagt 252  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  7072294 tttaaggtttgtgtataatttttaagaaaataattaattgtgttgattttaatggtaaaattagt 7072230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 29363440 - 29363375
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  29363440 tttaaggtttatgcacaattattaagaaaatgattaattgtgttgattttgatggtaaaactagta 29363375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 21010311 - 21010246
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||| |||| |||| ||||||||||||||||||||||| |||||||||| ||||||||||    
T  21010311 tttaaggtttatgcacaattattaagaaaatgattaattgtgttaattttgatggaaaaattagta 21010246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 11655926 - 11655990
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagt 252  Q
    |||||||||| ||||   || ||||||||||||||||||||||||||||||||||||||||||||    
T  11655926 tttaaggtttatgcacggttattaagaaaatgattaattgtgttgattttgatggtaaaattagt 11655990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 1063583 - 1063648
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||| |||| || |||||||||||||||||||||||||||||||||||  ||| |||||||||||    
T  1063583 tttaaagtttatgtataatttttaagaaaatgattaattgtgttgatttcaatgataaaattagta 1063648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 27448136 - 27448201
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||| |||| |||| ||||| ||||||||||||||||||||||||||| | |||||||||    
T  27448136 tttaaggtttttgcacaattattaaggaaatgattaattgtgttgattttgatgatgaaattagta 27448201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 31894190 - 31894255
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||| |||||| || ||| ||||||||||||||||||||||||||||  |||||||||||||||    
T  31894190 tttaagatttgtgtatgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagta 31894255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 8796310 - 8796266
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  8796310 tactccctccgtcccttaataaatgacccagttgacaatatacat 8796266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 11114832 - 11114782
Alignment:
Q  246 aattagtactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||| |||||||||||| |||||| |||||||||||    
T  11114832 aattagtactccctccgtctcttaataaatgatccagttgacaatatacat 11114782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 29979018 - 29979064
Alignment:
Q  246 aattagtactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||    
T  29979018 aattagtactccctccgtcccttaataaatgacctagttgacaatat 29979064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 253
Target Start/End: Original strand, 32440652 - 32440690
Alignment:
Q  215 aaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32440652 aaatgattaattgtgttgattttgatggtaaaattagta 32440690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 5302464 - 5302423
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  5302464 ttaagaaaatgattaaatgtgttgattttgatggtaaaatta 5302423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 6802044 - 6802003
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  6802044 ttaagaaaatgattaattatgttgattttgatggtaaaatta 6802003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 22020537 - 22020493
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||||| |||||||||||||| |||||||||||    
T  22020537 tactccctccgtcccttattaaatgacccagttgacaatatacat 22020493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 25435672 - 25435628
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||    
T  25435672 tactctctccgtcccttaataaatgacccagttgacaatatacat 25435628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 252
Target Start/End: Complemental strand, 23142804 - 23142737
Alignment:
Q  185 ttatttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagt 252  Q
    ||||||||||||| | ||  ||| ||||||||||||||||||||||||||||  ||||||||| ||||    
T  23142804 ttatttaaggtttatccacgattattaagaaaatgattaattgtgttgatttcaatggtaaaaatagt 23142737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 31855079 - 31855037
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatac 294  Q
    ||||||||||||||||||||||||||| ||||| |||||||||    
T  31855079 tactccctccgtcccttaataaatgactcagttgacaatatac 31855037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 1781936 - 1781871
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||| ||||  ||| |||||||||||||||||| ||||||| |  |||||||||||||||    
T  1781936 tttaaggtttatgcacgattgttaagaaaatgattaattatgttgatctcaatggtaaaattagta 1781871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 643431 - 643475
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||| |||||||||| ||||| |||||||||||    
T  643431 tactccctccgtccctaaataaatgactcagttgacaatatacat 643475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 252
Target Start/End: Complemental strand, 13909558 - 13909494
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagt 252  Q
    ||||| |||||||||  ||| ||||| |||||||||| |||||||||||  ||||||||||||||    
T  13909558 tttaaagtttgtgcacgattattaaggaaatgattaaatgtgttgatttcaatggtaaaattagt 13909494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 252
Target Start/End: Complemental strand, 15058251 - 15058187
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagt 252  Q
    |||||||||||||||  ||| ||||||||||||||||||  ||| ||||  ||||||||||||||    
T  15058251 tttaaggtttgtgcacgattattaagaaaatgattaattaagttaatttcaatggtaaaattagt 15058187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 18992164 - 18992120
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||| |||||||||||||||||||||| |||| |||||||||||    
T  18992164 tactcgctccgtcccttaataaatgacctagttgacaatatacat 18992120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 20662059 - 20662099
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  20662059 tactccctccgtcccttaataaatgacctagttgacaatat 20662099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 21804515 - 21804574
Alignment:
Q  194 gtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||||||  |||||||||||||| || ||||  || ||||||||||||    
T  21804515 gtttgtgcataatttttaaagaaatgattaattgtattaatttcaattgtaaaattagta 21804574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 6834349 - 6834411
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||| |||| ||||  ||| |||||||||| ||||||||||||||||||||| || ||||||    
T  6834349 tttaaagtttatgcacgattattaagaaaataattaattgtgttgattttgatagtcaaatta 6834411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 7920372 - 7920310
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||| ||||||||  ||||||||  |||||||||||| |||||||||  ||||||||||||    
T  7920372 tttaagatttgtgcacgatttttaaagaaatgattaattttgttgatttcaatggtaaaatta 7920310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 3291748 - 3291813
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||| ||||  ||| ||||| |||||||||||||| | |||||| ||||||| |||||||    
T  3291748 tttaaggtttttgcacgattattaaggaaatgattaattgtatcgattttaatggtaatattagta 3291813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 7097873 - 7097914
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatata 293  Q
    ||||||||||||||||||||||||||  ||||| ||||||||    
T  7097873 tactccctccgtcccttaataaatgattcagttgacaatata 7097914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 13087643 - 13087602
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||| |||||||||||||||||||  ||||||||||||    
T  13087643 ttaagaaagtgattaattgtgttgatttcaatggtaaaatta 13087602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 284
Target Start/End: Original strand, 33121541 - 33121574
Alignment:
Q  251 gtactccctccgtcccttaataaatgacccagtt 284  Q
    ||||||||||||||||||||||||||||| ||||    
T  33121541 gtactccctccgtcccttaataaatgacctagtt 33121574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 1955980 - 1956024
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||||| |||||||||| |||||||  |||||||||||||||    
T  1955980 ttaagaaaaagattaattgtattgatttcaatggtaaaattagta 1956024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 3720221 - 3720269
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattt 236  Q
    |||||||||||||||  ||| ||||  ||||||||||||||||||||||    
T  3720221 tttaaggtttgtgcacgattattaatgaaatgattaattgtgttgattt 3720269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 16696016 - 16696060
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||| |||| |||||| |||| |||||||||||    
T  16696016 tactccctccgtccctcaatagatgacctagttgacaatatacat 16696060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 25163425 - 25163381
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||| ||||||||||  |||| |||||||||||    
T  25163425 tactccctccgtccctcaataaatgacatagttgacaatatacat 25163381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 30237428 - 30237384
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||| ||||||||||||||||||  |||| |||||||||||    
T  30237428 tactcccttcgtcccttaataaatgacatagttgacaatatacat 30237384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 30717013 - 30716969
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||| |||||||||||| | |||| |||||||||||||||||||    
T  30717013 ttaaggaaatgattaattttattgactttgatggtaaaattagta 30716969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 31854818 - 31854850
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagtt 284  Q
    |||||||||||||||| ||||||||||||||||    
T  31854818 tactccctccgtccctaaataaatgacccagtt 31854850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 175 - 253
Target Start/End: Original strand, 32469922 - 32470000
Alignment:
Q  175 aaaataacaattatttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||| | || |||||| ||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  32469922 aaaataatatttgtttaagatttatgcataattttaaagaaaatgattaattgtgttgattttaatggtaaaattagta 32470000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 33790718 - 33790782
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagt 252  Q
    |||||||||| ||||  ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  33790718 tttaaggtttatgcacgattattaagaaaatgattaattgtgttgattttgatggtaaaattagt 33790782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 247
Target Start/End: Complemental strand, 462093 - 462033
Alignment:
Q  187 atttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaa 247  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||  |||||||||    
T  462093 atttaagatttgtgcataatttttaagaaaatgattaattgtattgatttcaatggtaaaa 462033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 11907585 - 11907651
Alignment:
Q  187 atttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||||||  ||||  ||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  11907585 atttaaggttaatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattagta 11907651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 17237282 - 17237348
Alignment:
Q  187 atttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||||||||   |||||||||||||||    
T  17237282 atttaaggtttgtgcatgattattaagaaaataattaattgtgttgattgcaatggtaaaattagta 17237348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 41711443 - 41711505
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||||||||||||| |||||||| | |||||||||||| |||||||||| ||||||||||||    
T  41711443 tttaaggtttgtgcacaatttttatggaaatgattaattatgttgattttaatggtaaaatta 41711505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 2066923 - 2066858
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||| ||||  ||| ||||| |||||||||||||||||||||||||||||||| ||||||    
T  2066923 tttaaggtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaagttagta 2066858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 6609895 - 6609830
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||| |||| ||||  ||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  6609895 tttaaagtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattagta 6609830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 17114574 - 17114509
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||  |||| | || ||||| |||||||||||||||||||||||||||||||||||||||    
T  17114574 tttaaggttgatgcacagttattaaggaaatgattaattgtgttgattttgatggtaaaattagta 17114509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 32884935 - 32884870
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||  ||| ||||||||||||||||||||||||||||  |||||| ||||||||    
T  32884935 tttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtagaattagta 32884870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 38502469 - 38502534
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||  |||||| || ||||| |||| ||||||||||||||||||||||||||||||||||    
T  38502469 tttaaggttgatgcatagttattaaggaaataattaattgtgttgattttgatggtaaaattagta 38502534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 49175921 - 49175986
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||| |||||||||||||||||||||||||  |||||  ||| |||||||||||    
T  49175921 tttaaggtttgtgcatgatttttaagaaaatgattaattgtggagatttcaatgataaaattagta 49175986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 51625217 - 51625152
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||| |||||||||  ||| ||||||||||||||||||||||||||||  |||||||||||||||    
T  51625217 tttaaagtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagta 51625152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 5744083 - 5744127
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  5744083 tactccctccgtcccttaataaatgacccagttgacaatatacat 5744127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 52859807 - 52859851
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  52859807 ttaaggaaatgattaattgtgttgattttgatggtaaaattagta 52859851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 7061651 - 7061716
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||| ||  ||| ||||| ||||||||||||||||||||||  |||||||||||||||    
T  7061651 tttaaggtttgtacacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 7061716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 47464352 - 47464417
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||||||| |||  ||| ||||| ||||||||||||||||||||||  |||||||||||||||    
T  47464352 tttaaggtttgagcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 47464417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 47773006 - 47773071
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||  |||| | || ||||| |||| ||||||||||||||||||||||||||||||||||    
T  47773006 tttaaggttgatgcacagttattaaggaaataattaattgtgttgattttgatggtaaaattagta 47773071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 6494851 - 6494807
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||| |||||||||||||||||||||||||| |||||||||||    
T  6494851 tactccttccgtcccttaataaatgacccagttgacaatatacat 6494807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 7738819 - 7738863
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||||||||||||||| |||| |||||||||||    
T  7738819 tactccctccgtcccttaataaatgacctagttgacaatatacat 7738863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 21240712 - 21240756
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||    
T  21240712 ttaaggaaatgattaactgtgttgattttgatggtaaaattagta 21240756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 34321714 - 34321758
Alignment:
Q  204 aatttttaagaaaatgattaattgtgttgattttgatggtaaaat 248  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||    
T  34321714 aattattaagaaaatgattaattgtgttgattttaatggtaaaat 34321758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 35380341 - 35380385
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||||| |||||||||| |||||||||||||||    
T  35380341 ttaagaaaatgattaattatgttgattttaatggtaaaattagta 35380385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 44536178 - 44536246
Alignment:
Q  183 aattatttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattag 251  Q
    |||| ||||| |||| ||||  ||| ||||| ||||||||||||||||||||||| |||||||||||||    
T  44536178 aattgtttaaagtttatgcacgattattaaggaaatgattaattgtgttgattttaatggtaaaattag 44536246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 45198340 - 45198384
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||||||||||||||| |||| |||||||||||    
T  45198340 tactccctccgtcccttaataaatgacctagttgacaatatacat 45198384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 257
Target Start/End: Original strand, 48914131 - 48914199
Alignment:
Q  189 ttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagtactcc 257  Q
    ||||||||| |||| | |||||||| |||| |||||||||||| ||||  |||||||||||||||||||    
T  48914131 ttaaggtttatgcacagtttttaaggaaataattaattgtgttcatttcaatggtaaaattagtactcc 48914199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 253
Target Start/End: Complemental strand, 3689669 - 3689631
Alignment:
Q  215 aaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  3689669 aaatgattaattgtattgattttgatggtaaaattagta 3689631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 5841414 - 5841476
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||||||||||||| || | ||||| |||||||| |||| ||||||||| ||||||||||||    
T  5841414 tttaaggtttgtgcacaactattaaggaaatgattgattgcgttgattttaatggtaaaatta 5841476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 38405089 - 38405151
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||||||||  ||| ||||| |||||||||||| |||||||||  ||||||||||||    
T  38405089 tttaaggtttgtgcacgattattaaggaaatgattaattctgttgatttaaatggtaaaatta 38405151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 46396870 - 46396932
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||||||||  ||  ||||| ||||||||||||||||||||||  ||||||||||||    
T  46396870 tttaaggtttgtgcacgatcattaagtaaatgattaattgtgttgatttcaatggtaaaatta 46396932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 52247415 - 52247477
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||||| |||||||  ||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  52247415 tttaaggattgtgcacgattattaagaaaatgattaattgtgttaatttcaatggtaaaatta 52247477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 3708520 - 3708479
Alignment:
Q  246 aattagtactccctccgtcccttaataaatgacccagttaac 287  Q
    |||||||||||||||||||||||||||| |||| ||||||||    
T  3708520 aattagtactccctccgtcccttaataagtgacacagttaac 3708479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 6643647 - 6643712
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||| ||||| |||  ||| ||||| ||||||||||||||||||||||  |||||||||||||||    
T  6643647 tttaatgtttgagcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 6643712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 40122841 - 40122906
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||| ||||||||  ||| ||||| ||||||||||||| ||||||||| ||| |||||||||||    
T  40122841 tttaagctttgtgcacgattattaaggaaatgattaattgcgttgattttaatgttaaaattagta 40122906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 42517646 - 42517687
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||||||||||||||||||||||||||  ||||||||||||    
T  42517646 ttaagaaaatgattaattgtgttgatttcaatggtaaaatta 42517687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 43237377 - 43237312
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||| ||||  ||| ||||| ||||||||||||||||| ||||  |||||||||||||||    
T  43237377 tttaaggtttatgcacgattattaaggaaatgattaattgtgtttatttcaatggtaaaattagta 43237312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 247 - 296
Target Start/End: Original strand, 46212345 - 46212394
Alignment:
Q  247 attagtactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||| |||||||||| |||||||||||||||| ||||| |||||||||||    
T  46212345 attattactccctccatcccttaataaatgactcagttgacaatatacat 46212394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 49579165 - 49579214
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgatttt 237  Q
    ||||| |||||||||| ||||||||  |||||||||||||||||||||||    
T  49579165 tttaaagtttgtgcatgatttttaaataaatgattaattgtgttgatttt 49579214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 1377292 - 1377248
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||| |||||||||||||||| |||||| |||||||||||    
T  1377292 tactccctctgtcccttaataaatgatccagttgacaatatacat 1377248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 3442344 - 3442384
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  3442344 tactccctccgtcccttaataaatgacctagttgacaatat 3442384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 3670013 - 3669965
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattt 236  Q
    |||||| ||| ||||| |||||||| |||||||||||||||||||||||    
T  3670013 tttaagatttatgcatgatttttaaaaaaatgattaattgtgttgattt 3669965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 4209620 - 4209576
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||||| |||||| |||| |||||||||||    
T  4209620 tactccctccgtcccttaatagatgacctagttgacaatatacat 4209576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 4264395 - 4264351
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||||||||||||||  |||| |||||||||||    
T  4264395 tactccctccgtcccttaataaatgacttagttgacaatatacat 4264351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 5735532 - 5735492
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  5735532 tactccctccgtcccttaataaatgacctagttgacaatat 5735492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 18359973 - 18360017
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||||| |||||| |||| |||||||||||    
T  18359973 tactccctccgtcccttaatagatgacctagttgacaatatacat 18360017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 253
Target Start/End: Complemental strand, 18532336 - 18532248
Alignment:
Q  165 catccgtcctaaaataacaattatttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||||  ||||||| | || |||||||||||||||| |||||||   |||||||||||| | |  ||||| |||||||||||||||    
T  18532336 catccgtctcaaaataatagttgtttaaggtttgtgcatgatttttacataaatgattaattatataaattttaatggtaaaattagta 18532248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 26147635 - 26147667
Alignment:
Q  221 ttaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||||||||||||||||||||    
T  26147635 ttaattgtgttgattttgatggtaaaattagta 26147667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 28152252 - 28152212
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  28152252 tactccctccgtcccttaataaatgacctagttgacaatat 28152212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 30192339 - 30192291
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattt 236  Q
    ||||| |||||| ||  ||||||||||||||||||||||||||||||||    
T  30192339 tttaatgtttgtacacgatttttaagaaaatgattaattgtgttgattt 30192291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 36602955 - 36602911
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||||| |||||| |||| |||||||||||    
T  36602955 tactccctccgtcccttaatagatgacctagttgacaatatacat 36602911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 36985903 - 36985855
Alignment:
Q  205 atttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||| || ||||||||||||||||||||||  |||||||||||||||    
T  36985903 atttttcaggaaatgattaattgtgttgatttcaatggtaaaattagta 36985855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 47579547 - 47579507
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  47579547 tactccctccgtcccttaataaatgacctagttgacaatat 47579507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 52869206 - 52869158
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattt 236  Q
    ||||||||||||||| |||| ||||| |||| |||||||||||||||||    
T  52869206 tttaaggtttgtgcacaattattaaggaaataattaattgtgttgattt 52869158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 8175554 - 8175629
Alignment:
Q  175 aaaataacaattatttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||||| | || |||| || |||||||| ||| |||| ||||||| |||||||||||||||  ||||||||||||    
T  8175554 aaaataatagttgtttatggcttgtgcatgattattaaaaaaatgaataattgtgttgatttcaatggtaaaatta 8175629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 2653552 - 2653489
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||| ||||||||| ||| ||||  ||||||||||||||||||||||  || ||||||||||||    
T  2653552 tttaagatttgtgcatgattattaa--aaatgattaattgtgttgatttcaattgtaaaattagta 2653489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 253
Target Start/End: Original strand, 2942659 - 2942697
Alignment:
Q  215 aaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  2942659 aaatgattaattgtgttgatttcgatgataaaattagta 2942697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 3443381 - 3443431
Alignment:
Q  246 aattagtactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||| ||||| |||| ||||||||||||||||| |||| |||||||||||    
T  3443381 aattattactctctccctcccttaataaatgacctagttgacaatatacat 3443431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 253
Target Start/End: Complemental strand, 25233288 - 25233250
Alignment:
Q  215 aaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  25233288 aaataattaattgtgttaattttgatggtaaaattagta 25233250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 28500878 - 28500940
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||| |||||||||  ||| ||||| |||||||| |||||||||||||  ||||||||||||    
T  28500878 tttaatgtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggtaaaatta 28500940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 35311210 - 35311272
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||||||||  ||| ||||| |||||||||||| |||| ||||  ||||||||||||    
T  35311210 tttaaggtttgtgcacgattattaaggaaatgattaattatgttaatttcaatggtaaaatta 35311272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 42616890 - 42616952
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||| ||||||||| ||| ||||  |||||||||| |||||||||||  ||||||||||||    
T  42616890 tttaagttttgtgcatgattattaaagaaatgattaactgtgttgatttcaatggtaaaatta 42616952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 49428329 - 49428391
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||| ||||  ||| ||||| ||||||||| ||||||||||||  ||||||||||||    
T  49428329 tttaaggtttttgcacgattattaaggaaatgattatttgtgttgatttcaatggtaaaatta 49428391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 16821318 - 16821383
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||  ||| ||||   |||||||||||||||||||||  ||| |||||||||||    
T  16821318 tttaaggtttgtgcacgattattaatgcaatgattaattgtgttgatttcaatgataaaattagta 16821383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 296
Target Start/End: Original strand, 19525717 - 19525758
Alignment:
Q  255 tccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||| ||||||||||| |||| |||||||||||    
T  19525717 tccctccgtccctcaataaatgacctagttgacaatatacat 19525758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 27880229 - 27880293
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||||||||  || ||||||||  ||||||||| ||||||||||||  |||||||||||||||    
T  27880229 tttaaggtttgtatatgatttttaaataaatgatta-ttgtgttgatttcaatggtaaaattagta 27880293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 34360789 - 34360724
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||| |||||||||  ||| ||||  |||||||||||||| |||||||  |||||||||||||||    
T  34360789 tttaaagtttgtgcacgattattaaagaaatgattaattgtattgatttcaatggtaaaattagta 34360724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 50263919 - 50263968
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgatttt 237  Q
    |||||||||||||||  ||| |||||||||||||| | ||||||||||||    
T  50263919 tttaaggtttgtgcacgattattaagaaaatgattcactgtgttgatttt 50263968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 54506901 - 54506860
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||||||||| |||||||||||  ||||||||||||    
T  54506901 ttaagaaaatgattaactgtgttgatttcaatggtaaaatta 54506860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 250
Target Start/End: Original strand, 56250272 - 56250345
Alignment:
Q  177 aataacaattatttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||| |||| |||||||||| ||||||||||||   |||||||||  |||| || ||||||||| ||||||||    
T  56250272 aataaaaattgtttaaggtttatgcataatttttttaaaaatgattgtttgtattaattttgatgataaaatta 56250345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 284
Target Start/End: Complemental strand, 5744352 - 5744312
Alignment:
Q  244 aaaattagtactccctccgtcccttaataaatgacccagtt 284  Q
    |||| ||||||||||||||||||| ||||||||||| ||||    
T  5744352 aaaagtagtactccctccgtccctaaataaatgacctagtt 5744312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 20678588 - 20678628
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||| ||||||||||||||||||||||| |||| |||||||    
T  20678588 tacttcctccgtcccttaataaatgacctagttgacaatat 20678628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 25644620 - 25644576
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||| | ||||||||||| |||| |||||||||||    
T  25644620 tactccctccgtccttcaataaatgacctagttgacaatatacat 25644576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 253
Target Start/End: Original strand, 25869848 - 25869896
Alignment:
Q  205 atttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||| |||||||||||||||||||||||||  ||  |||||||||||    
T  25869848 attttttagaaaatgattaattgtgttgatttcaattttaaaattagta 25869896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 26205704 - 26205744
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||||||  |||| |||||||    
T  26205704 tactccctccgtcccttaataaatgacttagttgacaatat 26205744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 31370313 - 31370357
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||| ||||||||||||| ||||||||| | ||||||||||||||    
T  31370313 ttaaaaaaatgattaattatgttgatttcgttggtaaaattagta 31370357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 39260132 - 39260176
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||| |||||||||||||||| |||||| |||| |||||||||||    
T  39260132 tacttcctccgtcccttaatagatgacctagttgacaatatacat 39260176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 46803893 - 46803853
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    ||||||||| |||||||||||||||||| |||| |||||||    
T  46803893 tactccctctgtcccttaataaatgacctagttgacaatat 46803853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 53412225 - 53412177
Alignment:
Q  205 atttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||||||||| |||||||| | |||||||  |||||||||||||||    
T  53412225 atttttaagaaaacgattaattttattgatttcaatggtaaaattagta 53412177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 54123757 - 54123709
Alignment:
Q  206 tttttaagaaaatgattaattgtgttgattttgatggtaaaattagtac 254  Q
    ||||||| ||||| ||||||| |||||||||| ||| ||||||||||||    
T  54123757 tttttaaaaaaattattaattatgttgattttaatgataaaattagtac 54123709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 55190566 - 55190610
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||||| || ||| |||| |||||||||||    
T  55190566 tactccctccgtcccttaatagataacctagttgacaatatacat 55190610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 17169 - 17104
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||  |||||||||||||||    
T  17169 tttaaggtttgtgcatgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagta 17104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 251
Target Start/End: Original strand, 31448672 - 31448735
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattag 251  Q
    |||||||||||||||  ||| ||||| |||||||||||||||||||||||||||||||||||||    
T  31448672 tttaaggtttgtgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattag 31448735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 34120418 - 34120483
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||| |||| ||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  34120418 tttaaagtttatgcatgattattaagaaaatgattaattgtgttgattttgatggtaaaactagta 34120483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 39785701 - 39785655
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaattagtact 255  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  39785701 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtact 39785655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 8947031 - 8947096
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||| |||||||||||||| ||||| ||||||||||||||||||||||  ||| |||||||||||    
T  8947031 tttaaagtttgtgcataattattaaggaaatgattaattgtgttgatttcaatgataaaattagta 8947096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 16463823 - 16463758
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||| ||||   || ||||| |||||||||||||||||||||||||||||||||||||||    
T  16463823 tttaaggtttatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagta 16463758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 26607947 - 26608008
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatt 249  Q
    |||||||||||||||  ||| ||||||||||||||||||||||||||||  |||||||||||    
T  26607947 tttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaatt 26608008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 27559836 - 27559792
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  27559836 tactccctccgtcccttaataaatgacccagttgacaatatacat 27559792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 36794397 - 36794353
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  36794397 ttaaggaaatgattaattgtgttgattttgatggtaaaattagta 36794353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 9458271 - 9458314
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaattagt 252  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  9458271 ttaagaaaataattaattgtgttgattttgatggtaaaattagt 9458314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 19937811 - 19937749
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||||||||  ||| ||||| ||||||||||||||||||||||  ||||||||||||    
T  19937811 tttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaatta 19937749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 252
Target Start/End: Complemental strand, 25637593 - 25637551
Alignment:
Q  210 taagaaaatgattaattgtgttgattttgatggtaaaattagt 252  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  25637593 taaggaaatgattaattgtgttgattttgatggtaaaattagt 25637551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 39691624 - 39691562
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||||||||  ||| ||||||||||||||||||||||||||||  ||| ||||||||    
T  39691624 tttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatgataaaatta 39691562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 3323265 - 3323330
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||  ||| |||  |||||||||||||||||||||||  |||||||||||||||    
T  3323265 tttaaggtttgtgcacgattattataaaaatgattaattgtgttgatttcaatggtaaaattagta 3323330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 16806015 - 16805950
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||  ||| ||||  ||||||||||||||||||||||| || ||||||||||||    
T  16806015 tttaaggtttgtgcacgattattaaagaaatgattaattgtgttgattttaatagtaaaattagta 16805950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 16845296 - 16845231
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||  ||| ||||  ||||||||||||||||||||||| || ||||||||||||    
T  16845296 tttaaggtttgtgcacgattattaaagaaatgattaattgtgttgattttaatagtaaaattagta 16845231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 293
Target Start/End: Complemental strand, 34827173 - 34827132
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatata 293  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  34827173 tactccctccgtcccttaataaatgacccagttgacaatata 34827132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 4045233 - 4045277
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||||||||||||||||| || |||||||||||    
T  4045233 tactccctccgtcccttaataaatgacccatttgacaatatacat 4045277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 39443847 - 39443799
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattt 236  Q
    ||||||||||||||| |||| |||||||||||||||||| |||||||||    
T  39443847 tttaaggtttgtgcacaattattaagaaaatgattaattttgttgattt 39443799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 44330645 - 44330601
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||||| |||||||||||||| |||||||||||    
T  44330645 tactccctccgtcccttattaaatgacccagttgacaatatacat 44330601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 296
Target Start/End: Complemental strand, 42038791 - 42038740
Alignment:
Q  245 aaattagtactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||| ||||||||||||||||||||||||||  ||||| |||||||||||    
T  42038791 aaattattactccctccgtcccttaataaatgattcagttgacaatatacat 42038740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 250
Target Start/End: Complemental strand, 32783510 - 32783436
Alignment:
Q  176 aaataacaattatttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||| ||| ||||||||||  ||||   || ||||||||||||||||||||||| |||||||| |||||||||    
T  32783510 aaataataatcatttaaggttgatgcacggttattaagaaaatgattaattgtgtttattttgatagtaaaatta 32783436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 36354421 - 36354487
Alignment:
Q  187 atttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||||||| || |  ||| ||||| |||||| || |||||||||||||||||||||||||||||    
T  36354421 atttaaggtttatgtacgattattaaggaaatgactagttgtgttgattttgatggtaaaattagta 36354487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 45235715 - 45235653
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||||||||  ||| ||||| |||||||| |||||||||||||  ||||||||||||    
T  45235715 tttaaggtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggtaaaatta 45235653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 15359087 - 15359128
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||||| ||||||||||||||||||||||||| ||||||||    
T  15359087 ttaagaagatgattaattgtgttgattttgatgataaaatta 15359128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 15435498 - 15435457
Alignment:
Q  195 tttgtgcataatttttaagaaaatgattaattgtgttgattt 236  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  15435498 tttgtgcatgatttttaagaaaataattaattgtgttgattt 15435457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 17695464 - 17695403
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatt 249  Q
    |||||||||||||||  ||| ||||| |||||||||||||| |||||||  |||||||||||    
T  17695464 tttaaggtttgtgcacgattattaaggaaatgattaattgtattgatttcaatggtaaaatt 17695403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 27501517 - 27501582
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||||||||| || ||| ||||| ||||||| |||| |||||||||  |||||||||||||||    
T  27501517 tttaaggtttgtgtatgattattaaggaaatgataaattatgttgatttcaatggtaaaattagta 27501582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 292
Target Start/End: Original strand, 40425248 - 40425289
Alignment:
Q  251 gtactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    ||||||||||||||||||||||||||||| |||| |||||||    
T  40425248 gtactccctccgtcccttaataaatgacctagttgacaatat 40425289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 7442891 - 7442935
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||||||||||||| | |||| |||||||||||    
T  7442891 tactccctccgtcccttaataaatgatctagttgacaatatacat 7442935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 14707535 - 14707575
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  14707535 tactccctccgtcccttaataaatgacctagttgacaatat 14707575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 18718500 - 18718460
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  18718500 tactccctccgtcccttaataaatgacctagttgacaatat 18718460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 23671637 - 23671597
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  23671637 tactccctccgtcccttaataaatgacctagttgacaatat 23671597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 32775903 - 32775947
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||| |||| ||||||||||| |||||||||||    
T  32775903 tactccctccgtccctcaatagatgacccagttgacaatatacat 32775947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 35314000 - 35313956
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||| ||||||||||||||||||||||  |||||||||||||||    
T  35314000 ttaaggaaatgattaattgtgttgatttcaatggtaaaattagta 35313956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 292
Target Start/End: Original strand, 44283281 - 44283319
Alignment:
Q  254 ctccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  44283281 ctccctccgtcccttaataaatgacctagttgacaatat 44283319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 5789626 - 5789691
Alignment:
Q  187 atttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagt 252  Q
    ||||||||||||||||  ||| ||||| |||||||||||||| |||| ||  || |||||||||||    
T  5789626 atttaaggtttgtgcacgattattaaggaaatgattaattgtattgaattcaatagtaaaattagt 5789691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 10005091 - 10005151
Alignment:
Q  175 aaaataacaattatttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattt 236  Q
    ||||||||| |  ||||||||||||||| | ||| |||||||||||| ||||||||||||||    
T  10005091 aaaataacagtcgtttaaggtttgtgcaca-tttataagaaaatgatcaattgtgttgattt 10005151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 296
Target Start/End: Complemental strand, 30708982 - 30708945
Alignment:
Q  259 tccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  30708982 tccgtcccttaataaatgacctagttgacaatatacat 30708945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 34225724 - 34225659
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||  ||| ||||| |||||| ||||| | |||||||| |||||||| ||||||    
T  34225724 tttaaggtttgtgcacgattattaaggaaatgaataattatattgattttaatggtaaacttagta 34225659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 35242278 - 35242339
Alignment:
Q  190 taaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattag 251  Q
    |||| ||| |||| |||||||||| | ||| ||||||||||||||||| ||| |||||||||    
T  35242278 taagatttatgcacaatttttaaggagatgtttaattgtgttgattttaatgttaaaattag 35242339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 43699594 - 43699643
Alignment:
Q  204 aatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||| |||||||||||||||| |||||||||||  || ||||||||||||    
T  43699594 aattattaagaaaatgattaactgtgttgatttcaatagtaaaattagta 43699643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 45169288 - 45169251
Alignment:
Q  199 tgcataatttttaagaaaatgattaattgtgttgattt 236  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  45169288 tgcatactttttaagaaaataattaattgtgttgattt 45169251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 1206683 - 1206747
Alignment:
Q  190 taaggtttgtgcataatttttaagaaaa-tgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||| ||| |||| |||||||| ||||||||| |||||||||   ||||||||||||||    
T  1206683 taaggtttgttcatgatttgtaagaaaaatgattaattatgttgatttcagtggtaaaattagta 1206747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 3987232 - 3987272
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||||||  |||| |||||||    
T  3987232 tactccctccgtcccttaataaatgacttagttgacaatat 3987272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 9877083 - 9877127
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||||| |||||| | || |||||||||||    
T  9877083 tactccctccgtcccttaatagatgacctaattgacaatatacat 9877127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 284
Target Start/End: Original strand, 10333372 - 10333412
Alignment:
Q  244 aaaattagtactccctccgtcccttaataaatgacccagtt 284  Q
    ||||||| |||||||||||||||||||||| |||| |||||    
T  10333372 aaaattattactccctccgtcccttaataagtgacacagtt 10333412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 250
Target Start/End: Complemental strand, 11367191 - 11367151
Alignment:
Q  210 taagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||| ||||||||||||||||||||| || |||||||||    
T  11367191 taagaagatgattaattgtgttgattttaattgtaaaatta 11367151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 12520855 - 12520891
Alignment:
Q  214 aaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  12520855 aaaataattaattgtgttgattttaatggtaaaatta 12520891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 14372338 - 14372298
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||||||| | || |||||||    
T  14372338 tactccctccgtcccttaataaatgacctaattgacaatat 14372298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 20682903 - 20682871
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagtt 284  Q
    ||||||||||||||||||||||||||| |||||    
T  20682903 tactccctccgtcccttaataaatgacacagtt 20682871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 20917729 - 20917761
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagtt 284  Q
    |||||||||||||||||||||||||||| ||||    
T  20917729 tactccctccgtcccttaataaatgacctagtt 20917761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 40471997 - 40471965
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagtt 284  Q
    ||||||||||||||||||||||||||| |||||    
T  40471997 tactccctccgtcccttaataaatgacacagtt 40471965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 10366623 - 10366688
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||  ||| ||||||||||||||||||||||||||||  |||||||||||||||    
T  10366623 tttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagta 10366688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 19823145 - 19823080
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||  ||| ||||| |||||||||||||||||||||||||||||| ||||||||    
T  19823145 tttaaggtttgtgcacgattattaaggaaatgattaattgtgttgattttgatggtagaattagta 19823080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 29023947 - 29024012
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||| ||||  ||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  29023947 tttaaggtttatgcacgattattaaaaaaatgattaattgtgttgattttgatggtaaaattagta 29024012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 12736532 - 12736618
Alignment:
Q  167 tccgtcctaaaataacaattatttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||| |||||||| | || ||||| |||||||||  ||||||||| ||||||||||||||||||||| | ||| |||||||||||    
T  12736532 tccgtcataaaataatagttgtttaaagtttgtgcacgatttttaaggaaatgattaattgtgttgattctaatgataaaattagta 12736618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 43253844 - 43253909
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||  ||| ||||| ||||||||||||||||||||||  |||||||||||||||    
T  43253844 tttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 43253909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 52291006 - 52290961
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaattagtac 254  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  52291006 ttaagaaaatgattaattgtattgattttgatggtaaaattagtac 52290961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 268
Target Start/End: Original strand, 33491064 - 33491144
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagtactccctccgtccctt 268  Q
    |||||||||||||||  ||| ||||| ||||||||||||||||||||||  || |||||||| ||||| ||||||| ||||    
T  33491064 tttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatagtaaaattggtactacctccgttcctt 33491144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 38833924 - 38833880
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  38833924 tactccctccgtcccttaataaatgacccagttgacaatatacat 38833880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 45811803 - 45811727
Alignment:
Q  174 taaaataacaattatttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||| | || |||||||||||||  | || ||||||||||||||||||| |||||||||| ||||||||||||    
T  45811803 taaaataatagttgtttaaggtttgtgtgtgatatttaagaaaatgattaattatgttgattttaatggtaaaatta 45811727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 54840128 - 54840172
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  54840128 tactccctccgtcccttaataaatgacccagttgacaatatacat 54840172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 34750632 - 34750565
Alignment:
Q  186 tatttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||||  |||||| |  |||||||| |||||||||||||| |||||||||||||||    
T  34750632 tatttaaggtttgtgcacgatttttgatgaaatgattgattgtgttgattttaatggtaaaattagta 34750565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 51064820 - 51064879
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaattagtactccctccgtccctt 268  Q
    |||| ||||||||||||||||||| |||  ||||||||||||||||||||||||| ||||    
T  51064820 ttaaaaaaatgattaattgtgttgctttcaatggtaaaattagtactccctccgttcctt 51064879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 1778776 - 1778714
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||||||||| ||| ||||| ||||||||||||||||||||||  ||| ||||||||    
T  1778776 tttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatgataaaatta 1778714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 11905956 - 11905891
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||| |||| ||||  ||| ||||||||||||||||||||||| ||||||||| |||||||||||    
T  11905956 tttaaagtttatgcacgattattaagaaaatgattaattgtgttaattttgatgataaaattagta 11905891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 253
Target Start/End: Complemental strand, 17652878 - 17652817
Alignment:
Q  192 aggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||| ||||  ||| ||||| ||||||||||||||||||||||||||||||||| |||||    
T  17652878 aggtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaactagta 17652817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 37312084 - 37312019
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||| ||||  ||| ||||| ||||||||||||||||||||||  |||||||||||||||    
T  37312084 tttaaggtttatgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 37312019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 37497626 - 37497561
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||| ||| ||||  ||| ||||| |||||||| ||||||||||||||||||||||||||||||    
T  37497626 tttaagatttatgcacgattattaaggaaatgatttattgtgttgattttgatggtaaaattagta 37497561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 40462459 - 40462398
Alignment:
Q  175 aaaataacaattatttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattt 236  Q
    ||||||| |||| ||||||||||| || | |||||||||||||||||||||||| |||||||    
T  40462459 aaaataataattgtttaaggtttgagcgtgatttttaagaaaatgattaattgttttgattt 40462398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 45710963 - 45710922
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  45710963 ttaagaaaatgattaattatgttgattttgatggtaaaatta 45710922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 54726598 - 54726557
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  54726598 ttaagaaaatgattaaatgtgttgattttgatggtaaaatta 54726557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 10571144 - 10571188
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||||||||||| |||||||| |||||||||||    
T  10571144 tactccctccgtcccttaataaataacccagttgacaatatacat 10571188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 254
Target Start/End: Complemental strand, 14194703 - 14194623
Alignment:
Q  174 taaaataacaattatttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagtac 254  Q
    |||||||||| |  |||||||||||||||  ||||||||  ||||||| ||||||||||||||  ||| ||||||||||||    
T  14194703 taaaataacagtcgtttaaggtttgtgcacgatttttaaagaaatgatcaattgtgttgatttcaatgataaaattagtac 14194623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 21907257 - 21907213
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||    
T  21907257 tactccctccgtcccttaataaatgactcagttgacaatatacat 21907213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 37833161 - 37833121
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  37833161 tactccctccgtcccttaataaatgacctagttaacaatat 37833121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 250
Target Start/End: Original strand, 51837939 - 51838002
Alignment:
Q  187 atttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||||||||||||||| | | ||||| ||||||||||||||||||||||  ||| ||||||||    
T  51837939 atttaaggtttgtgcatgagtattaagtaaatgattaattgtgttgatttcaatgataaaatta 51838002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 7459814 - 7459860
Alignment:
Q  246 aattagtactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||| ||||||||||||||||||||||||||||| |||| |||||||    
T  7459814 aatttgtactccctccgtcccttaataaatgacctagttgacaatat 7459860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 34827515 - 34827473
Alignment:
Q  251 gtactccctccgtcccttaataaatgacccagttaacaatata 293  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  34827515 gtactccctccgtcccttaataaatgacctagttgacaatata 34827473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 37772945 - 37773007
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||||||||| ||| ||||| |||||||||||||| ||||||   ||||||||||||    
T  37772945 tttaaggtttgtgcatgattattaaggaaatgattaattgtattgattacaatggtaaaatta 37773007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 8679035 - 8679100
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||| ||| ||||  ||| ||||| ||||||||||||||||||||||  |||||||||||||||    
T  8679035 tttaagatttatgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 8679100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 250
Target Start/End: Complemental strand, 19609460 - 19609371
Alignment:
Q  161 acttcatccgtcctaaaataacaattatttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||| ||||||  ||||||| |||  |||||| |||||| || | ||||||||||||||||| ||||||||||||  || |||||||||    
T  19609460 acttcttccgtctcaaaataataatcgtttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatcgtaaaatta 19609371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 24569102 - 24569143
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||||||||||||||||||||||||||  ||||||||||||    
T  24569102 ttaagaaaatgattaattgtgttgatttcaatggtaaaatta 24569143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 30190641 - 30190706
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||   || | ||| ||||||||||||||||||||||  |||||||||||||||    
T  30190641 tttaaggtttgtgcacggttatgaaggaaatgattaattgtgttgatttcaatggtaaaattagta 30190706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 34957637 - 34957576
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatt 249  Q
    |||||||||| || | ||||  |||| ||||||||||||||||||| |||||||||||||||    
T  34957637 tttaaggtttatggacaattactaaggaaatgattaattgtgttgaatttgatggtaaaatt 34957576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 38795478 - 38795413
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||| |||||||||  || |||||| ||||||||||||||||| ||||  |||||||||||||||    
T  38795478 tttaatgtttgtgcacgatatttaaggaaatgattaattgtgtttatttcaatggtaaaattagta 38795413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 43719379 - 43719338
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||| |||||||||||||||||||||||| ||||||||||||    
T  43719379 ttaataaaatgattaattgtgttgattttaatggtaaaatta 43719338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 48706846 - 48706887
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatata 293  Q
    |||||||||||||||||||||||||| |||||| ||||||||    
T  48706846 tactccctccgtcccttaataaatgatccagttgacaatata 48706887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 50035198 - 50035263
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||| ||| |||||||||||| ||||| |||||||||  ||  |||||||||||    
T  50035198 tttaaggtttgtgcatgattattaagaaaatgaataattatgttgatttcaataataaaattagta 50035263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 8559005 - 8559045
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  8559005 tactccctccgtcccttaataaatgacctagttgacaatat 8559045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 10435380 - 10435336
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||| ||||||||||| |||| |||||||||||    
T  10435380 tactccctccgtccctcaataaatgacctagttgacaatatacat 10435336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 17053125 - 17053081
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||| |||||||||| |||||||||||||||| |||||||||||    
T  17053125 tactctctccgtccctcaataaatgacccagttgacaatatacat 17053081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 18659313 - 18659273
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  18659313 tactccctccgtcccttaataaatgacctagttgacaatat 18659273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 250
Target Start/End: Complemental strand, 19612052 - 19611980
Alignment:
Q  178 ataacaattatttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||| |||| ||||| ||||||| |  |||||||||||| |||||||||||||||||||  ||| ||||||||    
T  19612052 ataataattgtttaaagtttgtgtacgatttttaagaaagtgattaattgtgttgatttcaatgttaaaatta 19611980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 252
Target Start/End: Complemental strand, 27471469 - 27471405
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagt 252  Q
    |||||| ||||||||  ||| |||||||||||||||||| |||||||||  ||||| ||||||||    
T  27471469 tttaagatttgtgcacgattattaagaaaatgattaattatgttgatttcaatggtgaaattagt 27471405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 29728098 - 29728142
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||||||||||||| | |||| |||||||||||    
T  29728098 tactccctccgtcccttaataaatgatctagttgacaatatacat 29728142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 45167560 - 45167516
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||||| |||| |||||| |||||||||||    
T  45167560 tactccctccgtcccttaatatatgatccagttgacaatatacat 45167516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 51062651 - 51062607
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||||||||||| ||||| | |||||||||    
T  51062651 tactccctccgtcccttaataaatgactcagttgataatatacat 51062607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 53560330 - 53560290
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaatt 249  Q
    ||||| |||||||||||| ||||||||||||||||||||||    
T  53560330 ttaaggaaatgattaattatgttgattttgatggtaaaatt 53560290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 37695654 - 37695709
Alignment:
Q  195 tttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||||||  ||| ||||| ||||||||||||||||||||||  ||||||||||||    
T  37695654 tttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaatta 37695709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 11632215 - 11632150
Alignment:
Q  187 atttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||| ||||||||  ||| |||| |||||||||||||||||||||||  | |||||||||||||    
T  11632215 atttaagatttgtgcacgattattaa-aaaatgattaattgtgttgatttcaacggtaaaattagta 11632150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 27849203 - 27849153
Alignment:
Q  246 aattagtactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||| |||||| |||||||||||||| |||||| |||| |||||||||||    
T  27849203 aattattactccttccgtcccttaatagatgacctagttgacaatatacat 27849153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 28690763 - 28690825
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||||||||  ||| ||||  ||||||||||||||||||||||  | ||||||||||    
T  28690763 tttaaggtttgtgcacgattattaaagaaatgattaattgtgttgatttcaacggtaaaatta 28690825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 31158503 - 31158564
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||||||||  ||| |||| |||||||||||||||| |||||| ||| |||||||||    
T  31158503 tttaaggtttgtgcacgattattaa-aaaatgattaattgtgctgatttcgatagtaaaatta 31158564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 284
Target Start/End: Complemental strand, 34555418 - 34555380
Alignment:
Q  246 aattagtactccctccgtcccttaataaatgacccagtt 284  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  34555418 aattagtactccctccgtcccttaataagtgacacagtt 34555380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 250
Target Start/End: Original strand, 54477457 - 54477502
Alignment:
Q  204 aatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||||||||||| || ||||||||||||||||| ||||||||||||    
T  54477457 aatttttaagaaa-tggttaattgtgttgattttaatggtaaaatta 54477502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 36460397 - 36460462
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||| |||||||||  ||| |||||||||| |||||||||||| ||||  || ||||||||||||    
T  36460397 tttaaagtttgtgcacgattattaagaaaattattaattgtgttaatttcaatagtaaaattagta 36460462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 4238494 - 4238538
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||| ||||||||||  |||| |||||||||||    
T  4238494 tactccctccgtccctcaataaatgacttagttgacaatatacat 4238538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 23004384 - 23004428
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||| |||||||||||||||| |||||  |||||||||||||||    
T  23004384 ttaaggaaatgattaattgtgtcgatttcaatggtaaaattagta 23004428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 32951136 - 32951180
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||| ||||||||| | |||| |||||||||||    
T  32951136 tactccctccgtccctcaataaatgatctagttgacaatatacat 32951180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 279
Target Start/End: Complemental strand, 50676778 - 50676746
Alignment:
Q  247 attagtactccctccgtcccttaataaatgacc 279  Q
    ||||||||||||||||||||||||||| |||||    
T  50676778 attagtactccctccgtcccttaataagtgacc 50676746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 52668486 - 52668526
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||| ||| |||| |||||||    
T  52668486 tactccctccgtcccttaataaatcacctagttgacaatat 52668526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 268
Target Start/End: Original strand, 252510 - 252590
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagtactccctccgtccctt 268  Q
    ||||||||||| | || ||| ||||  |||||||||||| |||||||||| ||||||||||||||||||||||||| ||||    
T  252510 tttaaggtttgcgtatgattattaaagaaatgattaattatgttgattttaatggtaaaattagtactccctccgttcctt 252590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 39222 - 39157
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||| |||| |||| ||||| ||||||||||||||||||||||||||| | |||||||||    
T  39222 tttaaggtttttgcacaattattaaggaaatgattaattgtgttgattttgatgatgaaattagta 39157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 255
Target Start/End: Original strand, 2588047 - 2588114
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagtact 255  Q
    |||||||||  |||| | || ||||| |||||||||||||||||||||||||||||||||||||||||    
T  2588047 tttaaggttgatgcacagttattaaggaaatgattaattgtgttgattttgatggtaaaattagtact 2588114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 2232052 - 2232117
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||  ||| |||||||||||| |||||||||||||||  |||||||||||||||    
T  2232052 tttaaggtttgtgcacgattattaagaaaatgaataattgtgttgatttcaatggtaaaattagta 2232117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 9515880 - 9515815
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||  ||| |||||| |||||||||||||||||||||  |||||||||||||||    
T  9515880 tttaaggtttgtgcacgattattaagataatgattaattgtgttgatttcaatggtaaaattagta 9515815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 40530203 - 40530268
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||| ||||||  ||| ||||||||||||||||||||||||||||  |||||||||||||||    
T  40530203 tttaaggtctgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagta 40530268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 32002014 - 32002058
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  32002014 tactccctccgtcccttaataaatgacccagttgacaatatacat 32002058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 32334638 - 32334682
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  32334638 tactccctccgtcccttaataaatgacccagttgacaatatacat 32334682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 39895042 - 39894998
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  39895042 tactccctccgtcccttaataaatgacccagttgacaatatacat 39894998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 40900053 - 40899987
Alignment:
Q  187 atttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||||||| ||||   || ||||| |||||||||||||||||||||||||||| ||||||||||    
T  40900053 atttaaggtttatgcacggttattaaggaaatgattaattgtgttgattttgatggcaaaattagta 40899987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 250
Target Start/End: Complemental strand, 843582 - 843509
Alignment:
Q  177 aataacaattatttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||| |||| |||||||||||||||  ||| |||||||||||||||||| |||||||||  ||| ||||||||    
T  843582 aataataattgtttaaggtttgtgcacgattattaagaaaatgattaattttgttgatttcaatgataaaatta 843509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 7827905 - 7827970
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||| ||  ||| |||||||||| |||||||||||||||||  |||||||||||||||    
T  7827905 tttaaggtttgtacacgattattaagaaaataattaattgtgttgatttcaatggtaaaattagta 7827970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 38508166 - 38508231
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||| |||||||   ||||||||||||||||||||||||||| ||||  |||||||||||||||    
T  38508166 tttaagatttgtgctcgatttttaagaaaatgattaattgtgttaatttcaatggtaaaattagta 38508231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 5364685 - 5364641
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||    
T  5364685 tactctctccgtcccttaataaatgacccagttgacaatatacat 5364641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 252
Target Start/End: Complemental strand, 8698443 - 8698379
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagt 252  Q
    |||||||||||||||  ||| ||||  ||||||||||||||||||||||  ||||||||||||||    
T  8698443 tttaaggtttgtgcacgattattaaagaaatgattaattgtgttgatttcaatggtaaaattagt 8698379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 29627529 - 29627485
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||| |||||||||||||||| |||||||||||    
T  29627529 tactccctccgtccctaaataaatgacccagttgacaatatacat 29627485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 42922846 - 42922894
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattt 236  Q
    |||||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  42922846 tttaagatttgtgcatgattattaagaaaatgattaattgtgttgattt 42922894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 8724988 - 8725050
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||||||||  ||| ||||  ||||||||||||||||||||||  ||||||||||||    
T  8724988 tttaaggtttgtgcacgattattaaagaaatgattaattgtgttgatttcaatggtaaaatta 8725050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 11796146 - 11796208
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||||||||| ||| ||| || ||||||||| ||||||||||||||||| ||| ||||||||    
T  11796146 tttaaggtttgcgcacaatgttaaagaaaatggttaattgtgttgattttaatgataaaatta 11796208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 19930059 - 19930021
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaa 247  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  19930059 ttaagaaaatgattaattttgttgattttgatggtaaaa 19930021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 253
Target Start/End: Complemental strand, 21060737 - 21060699
Alignment:
Q  215 aaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  21060737 aaatgattaattgtgtttattttgatggtaaaattagta 21060699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 27542929 - 27542867
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||||||||  ||| ||||| |||||||| |||||||||||||  ||||||||||||    
T  27542929 tttaaggtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggtaaaatta 27542867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 37184058 - 37184120
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||| ||||||||  |||||||| |||||||||||||| ||||||||  ||||||||||||    
T  37184058 tttaagttttgtgcaagatttttaaaaaaatgattaattgagttgatttcaatggtaaaatta 37184120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 41478959 - 41478897
Alignment:
Q  190 taaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagt 252  Q
    ||||||||||||   ||||||||||||||||||||||||| | ||||  ||||||||||||||    
T  41478959 taaggtttgtgcgcgatttttaagaaaatgattaattgtgcttatttcaatggtaaaattagt 41478897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 41492434 - 41492372
Alignment:
Q  190 taaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagt 252  Q
    ||||||||||||   ||||||||||||||||||||||||| | ||||  ||||||||||||||    
T  41492434 taaggtttgtgcgcgatttttaagaaaatgattaattgtgcttatttcaatggtaaaattagt 41492372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 3348125 - 3348170
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaattagtac 254  Q
    ||||| |||| ||||||| |||||||||||||||||||||||||||    
T  3348125 ttaaggaaattattaattatgttgattttgatggtaaaattagtac 3348170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 4818685 - 4818620
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||  ||| ||||| |||| |||||||||||||||||  || ||||||||||||    
T  4818685 tttaaggtttgtgcacgattattaaggaaataattaattgtgttgatttcaattgtaaaattagta 4818620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 15818459 - 15818524
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||| ||||  ||| ||||| ||||| ||||||||||||||||  |||||||||||||||    
T  15818459 tttaaggtttatgcacgattattaaggaaatgtttaattgtgttgatttcaatggtaaaattagta 15818524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 970399 - 970355
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||| ||||||||||| |||| |||||||||||    
T  970399 tactccctccgtccctcaataaatgacctagttgacaatatacat 970355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 4299833 - 4299877
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||| ||||||||||| |||| |||||||||||    
T  4299833 tactccctccgtccctcaataaatgacctagttgacaatatacat 4299877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 5212922 - 5212966
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||| |||||||||||||| |||| |||||||||||    
T  5212922 tactccctccgtctcttaataaatgacctagttgacaatatacat 5212966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 22613709 - 22613753
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||| ||||||||||| |||| |||||||||||    
T  22613709 tactccctccgtccctcaataaatgacctagttgacaatatacat 22613753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 35447997 - 35448037
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  35447997 tactccctccgtcccttaataaatgacctagttgacaatat 35448037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 40512680 - 40512724
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||| ||||||||||||||||||||| ||||| |||||||||||    
T  40512680 tactctctccgtcccttaataaatgactcagttgacaatatacat 40512724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 42148568 - 42148528
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  42148568 tactccctccgtcccttaataaatgacctagttgacaatat 42148528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 253
Target Start/End: Complemental strand, 3076717 - 3076659
Alignment:
Q  194 gtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||||| |||||| || |||||||||||||||||||||||  ||| |||||||||||    
T  3076717 gtttgtgcacaatttt-aacaaaatgattaattgtgttgatttcaatgataaaattagta 3076659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 250
Target Start/End: Complemental strand, 32440272 - 32440213
Alignment:
Q  191 aaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||||||||||| ||||||||  ||||||||||||||||| ||||  ||| ||||||||    
T  32440272 aaggtttgtgcatgatttttaaagaaatgattaattgtgttaatttcaatgataaaatta 32440213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 41062161 - 41062204
Alignment:
Q  210 taagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||||| ||||||| |||||||||||||| |||||||||||    
T  41062161 taagaaaataattaattatgttgattttgatgataaaattagta 41062204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 41496213 - 41496150
Alignment:
Q  189 ttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagt 252  Q
    ||||||||||| ||  ||| |||| ||||| |||||||||||||||||  ||||||||||||||    
T  41496213 ttaaggtttgtacacgattattaaaaaaataattaattgtgttgatttcaatggtaaaattagt 41496150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 18890553 - 18890599
Alignment:
Q  207 ttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||||||||||||| ||| |||| |||| |||||||||||||||    
T  18890553 ttttaagaaaatgattagttgagttgtttttaatggtaaaattagta 18890599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 29570526 - 29570464
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||| ||||||||  ||| ||||  ||||||||||||||||||||||| ||| ||||||||    
T  29570526 tttaagatttgtgcacgattattaaagaaatgattaattgtgttgattttaatgttaaaatta 29570464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 5282489 - 5282416
Alignment:
Q  175 aaaataacaattatttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaat 248  Q
    ||||||| | || |||||||||| || | | |||||||||||||||||||||||| | ||||| ||| ||||||    
T  5282489 aaaataatagttgtttaaggtttctgtacagtttttaagaaaatgattaattgtgctaattttaatgataaaat 5282416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 296
Target Start/End: Complemental strand, 39036668 - 39036627
Alignment:
Q  255 tccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||||| |||||| |||| |||||||||||    
T  39036668 tccctccgtcccttaatagatgacctagttgacaatatacat 39036627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 14475226 - 14475274
Alignment:
Q  248 ttagtactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||||| | |||| |||||| |||| |||||||||||    
T  14475226 ttagtactccctccgtccttcaatagatgacctagttgacaatatacat 14475274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 15439299 - 15439363
Alignment:
Q  189 ttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||| ||||||||  || |||||| |||||||||||||| || ||||  |||||||||||||||    
T  15439299 ttaagttttgtgcacgatatttaaggaaatgattaattgtattaatttcaatggtaaaattagta 15439363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 16048346 - 16048302
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||| ||||||||| ||||||||||| |||| |||||||||||    
T  16048346 tactccgtccgtccctcaataaatgacctagttgacaatatacat 16048302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 250
Target Start/End: Complemental strand, 18841603 - 18841551
Alignment:
Q  198 gtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||| ||||||||| ||||||||||||| | |||||||  ||||||||||||    
T  18841603 gtgcaaaatttttaaaaaaatgattaattatattgatttaaatggtaaaatta 18841551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 27675801 - 27675769
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagtt 284  Q
    ||||||||||||||||||||||||||| |||||    
T  27675801 tactccctccgtcccttaataaatgacacagtt 27675769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 35290547 - 35290503
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||| |||||||||||||||| |||||| |||| |||||||||||    
T  35290547 tacttcctccgtcccttaatagatgacctagttgacaatatacat 35290503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 38698224 - 38698184
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatat 292  Q
    |||||||||||||||||||||||||||  |||| |||||||    
T  38698224 tactccctccgtcccttaataaatgacttagttgacaatat 38698184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 43067482 - 43067438
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||| ||||||||| ||||||||||| |||| |||||||||||    
T  43067482 tactccatccgtccctcaataaatgacctagttgacaatatacat 43067438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 1817 - 1773
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  1817 ttaagaaaatgattaattatgttgattttgatggtaaaattagta 1773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 253
Target Start/End: Complemental strand, 6884 - 6806
Alignment:
Q  175 aaaataacaattatttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||||| || |||||||||||||| | ||||||||| |||||||||||||| || ||||  ||| |||||||||||    
T  6884 aaaataacagttgtttaaggtttgtgcgtgatttttaaggaaatgattaattgttttaatttcaatgataaaattagta 6806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 20334 - 20399
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||| |||||||  ||| ||||  |||||||||||||||||||||||||| ||||||||||||    
T  20334 tttaagggttgtgcaagattattaattaaatgattaattgtgttgattttgattgtaaaattagta 20399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 15216 - 15260
Alignment:
Q  252 tactccctccgtcccttaataaatgacccagttaacaatatacat 296  Q
    |||||||||||||||||||||||||||| |||| |||||||||||    
T  15216 tactccctccgtcccttaataaatgacctagttgacaatatacat 15260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 253
Target Start/End: Original strand, 14165 - 14216
Alignment:
Q  202 ataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||||||||| ||||||||||| |||||||||||| || ||||||||||||    
T  14165 ataatttttaataaaatgattaaatgtgttgattttaatcgtaaaattagta 14216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 5524 - 5462
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||||||||| ||| ||| |||||||||||||||| |||||||| ||  ||||||||||||    
T  5524 tttaaggtttgtacatgattattaagaaaatgattaactgtgttgaattcaatggtaaaatta 5462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 6266 - 6331
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    ||||| |||||||||  ||||||||  ||||||||||||||||||||| | ||| |||||||||||    
T  6266 tttaaagtttgtgcacgatttttaacgaaatgattaattgtgttgattctaatgataaaattagta 6331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 50338 - 50273
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagta 253  Q
    |||||||||||||||  ||| ||||| ||||||||||||||||| ||||  ||| |||||||||||    
T  50338 tttaaggtttgtgcacgattattaaggaaatgattaattgtgttaatttcaatgataaaattagta 50273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 237
Target Start/End: Complemental strand, 22689 - 22661
Alignment:
Q  209 ttaagaaaatgattaattgtgttgatttt 237  Q
    |||||||||||||||||||||||||||||    
T  22689 ttaagaaaatgattaattgtgttgatttt 22661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 296
Target Start/End: Complemental strand, 13005 - 12969
Alignment:
Q  260 ccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||||||||| |||||||||||    
T  13005 ccgtcccttaataaatgacccagttgacaatatacat 12969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 296
Target Start/End: Complemental strand, 10646 - 10610
Alignment:
Q  260 ccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||||||||| |||||||||||    
T  10646 ccgtcccttaataaatgacccagttgacaatatacat 10610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 296
Target Start/End: Complemental strand, 14312 - 14276
Alignment:
Q  260 ccgtcccttaataaatgacccagttaacaatatacat 296  Q
    ||||||||||||||||||||||||| |||||||||||    
T  14312 ccgtcccttaataaatgacccagttgacaatatacat 14276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1391 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1391
Description:

Target: scaffold1391; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 1798 - 1860
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||| |||| ||||  ||| |||||||||| ||||||||||||||||||||| || ||||||    
T  1798 tttaaagtttatgcacgattattaagaaaataattaattgtgttgattttgatagtcaaatta 1860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 16232 - 16170
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||| ||||| ||  ||| ||||| ||||||||||||||||||||||| ||| ||||||||    
T  16232 tttaagatttgttcacgattattaaggaaatgattaattgtgttgattttaatgataaaatta 16170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 105818 - 105756
Alignment:
Q  188 tttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    |||||| ||| ||||| ||| ||||| ||||||||||||||||| ||||  ||||||||||||    
T  105818 tttaagatttatgcatgattattaagtaaatgattaattgtgtttatttcaatggtaaaatta 105756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 7983 - 8024
Alignment:
Q  209 ttaagaaaatgattaattgtgttgattttgatggtaaaatta 250  Q
    ||||| |||||||||||| ||||||||| |||||||||||||    
T  7983 ttaaggaaatgattaattttgttgatttggatggtaaaatta 8024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 33999 - 34064
Alignment:
Q  187 atttaaggtttgtgcataatttttaagaaaatgattaattgtgttgattttgatggtaaaattagt 252  Q
    ||||||||||||||||  ||| ||||| |||||||||||||| |||| ||  || |||||||||||    
T  33999 atttaaggtttgtgcacgattattaaggaaatgattaattgtattgaattcaatagtaaaattagt 34064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 292
Target Start/End: Complemental strand, 117579 - 117542
Alignment:
Q  255 tccctccgtcccttaataaatgacccagttaacaatat 292  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  117579 tccctccgtcccttaataaatgacctagttgacaatat 117542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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