View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2837_low_20 (Length: 359)
Name: NF2837_low_20
Description: NF2837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2837_low_20 |
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Alignment Details
Target: chr2 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 19 - 346
Target Start/End: Complemental strand, 645856 - 645529
Alignment:
| Q |
19 |
tatggggccaatagaaagtcacaacctcacaaagagaaggtcattcatactaattgagtgcttaaattcgtaagcttattggaattgtcataatgattat |
118 |
Q |
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| T |
645856 |
tatggggccaatagaaagtcacaacctcacaaagagaaggtcattcatactaattgagtgcttaaattcgtaagcttattggaattgtcataatgattat |
645757 |
T |
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| Q |
119 |
tccttatatgtactttattttgattattgatgaactatctcaaatatgcaaacagtgttgatgtcgattccttgagacatgttaagagtacaagacatca |
218 |
Q |
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| T |
645756 |
tccttatatgtactttattttgattattgatgaactatctcaaatatgcaaacagtgttgatgtcgattccttgagacatgttaagagtacaagacatca |
645657 |
T |
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| Q |
219 |
atgttgttagagacttcctaattaaaacaaaataaaaaggtattgtttgttgtaccaaactcaatcaattatggagaacggtgcactagtgttcatatga |
318 |
Q |
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| T |
645656 |
atgttgttagagacttcctaattaaaacaaaataaaaaggttttgtttgttgtaccaaactcaatcaattatggagaacgttgcactagtgttcatatga |
645557 |
T |
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| Q |
319 |
ttttgtttctactttaatgtgttctctg |
346 |
Q |
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| T |
645556 |
ttttgtttctacttttatgtgttctctg |
645529 |
T |
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