View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2837_low_39 (Length: 266)
Name: NF2837_low_39
Description: NF2837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2837_low_39 |
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Alignment Details
Target: chr7 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 3 - 252
Target Start/End: Complemental strand, 21396096 - 21395847
Alignment:
| Q |
3 |
gtttaaatcaaactatacataaaacaatctaaatctatcaataacaagggaaaaaagtatacataaaacaaaataacgtgattgaagtcatgaagattgg |
102 |
Q |
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| T |
21396096 |
gtttaaatcaaactatacataaaacaatctaaatttatcaataacaagggaaaaaagtatacataaaacaaaataacgtgattgaagtcatgaagattgg |
21395997 |
T |
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| Q |
103 |
attttaggcacataaagataaaaatgtttgtacttgtaaaagcaattttcagataaggaaaatcaaataataaagacaagaaatttattatgaccgaaat |
202 |
Q |
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| T |
21395996 |
attttaggcacgtaaagataaaaatgtttgtacttgtaaaagcaattttcagataaggaaaatcaaataataaagacaagaaatttattatgaccgaaat |
21395897 |
T |
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| Q |
203 |
ggtcggatctcagaacattagcatgtggttaagctggcaaataaaatatt |
252 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21395896 |
ggtcggatctcagaacattagcatgtggttaagctggcaaataaaatatt |
21395847 |
T |
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