View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2837_low_40 (Length: 266)
Name: NF2837_low_40
Description: NF2837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2837_low_40 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 13 - 266
Target Start/End: Original strand, 3448733 - 3448986
Alignment:
| Q |
13 |
aatatcataaggcgcttgaattctcttcgaaaacgtgaaaacttcatcgtcatccatattactaagcactcttaattctttcatcaaacaccttacgtgc |
112 |
Q |
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| T |
3448733 |
aatatcataaggcgcttgaattctcttcgaaaacgtgaaaacttcatcgtcatccatattactaagcactctcaattctttcatcaaacaccttacatgc |
3448832 |
T |
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| Q |
113 |
attacagttttcgcaatgttacctgaatttttcacctctccttgaatccttatcatcgctgcaccttctctgattctacagagcgcttcaccgagattac |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3448833 |
attacagttttcgcaatgttacctgaatttttcacctctccttgaatccttatcatcgctgcaccttctctgattctacagagcgcttcaccgagattac |
3448932 |
T |
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| Q |
213 |
ttgcggagcttataaaaggtgttcggaaattgtgtttgttgatgtgattctgat |
266 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3448933 |
ttgcggagcttataaaaggtgttcggaaattgtgtttgttgatgtgattctgat |
3448986 |
T |
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