View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2837_low_8 (Length: 512)

Name: NF2837_low_8
Description: NF2837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2837_low_8
NF2837_low_8
[»] chr8 (10 HSPs)
chr8 (18-227)||(15349472-15349681)
chr8 (152-222)||(4030191-4030261)
chr8 (172-227)||(12200916-12200971)
chr8 (172-227)||(12445344-12445399)
chr8 (189-227)||(12195901-12195939)
chr8 (189-227)||(12440329-12440367)
chr8 (343-404)||(15349244-15349305)
chr8 (355-404)||(4031577-4031626)
chr8 (347-404)||(12195685-12195742)
chr8 (347-404)||(12440113-12440170)
[»] chr4 (56 HSPs)
chr4 (61-227)||(48871143-48871312)
chr4 (61-227)||(48876447-48876616)
chr4 (61-227)||(48886829-48886998)
chr4 (343-413)||(7790432-7790502)
chr4 (340-413)||(7786816-7786889)
chr4 (336-404)||(7908663-7908731)
chr4 (340-404)||(48864396-48864460)
chr4 (65-222)||(7237065-7237222)
chr4 (346-413)||(50666667-50666734)
chr4 (343-413)||(7878735-7878805)
chr4 (286-413)||(48853033-48853166)
chr4 (270-404)||(49038444-49038578)
chr4 (340-413)||(7765994-7766067)
chr4 (336-413)||(7771747-7771824)
chr4 (340-404)||(45371710-45371774)
chr4 (349-404)||(48147358-48147413)
chr4 (336-406)||(7813836-7813906)
chr4 (346-404)||(49043810-49043868)
chr4 (336-413)||(7773457-7773534)
chr4 (340-404)||(45384528-45384592)
chr4 (340-404)||(48156065-48156129)
chr4 (152-227)||(45365623-45365698)
chr4 (336-406)||(7800996-7801066)
chr4 (340-413)||(7237379-7237452)
chr4 (346-395)||(37826632-37826681)
chr4 (152-221)||(45384293-45384362)
chr4 (347-404)||(48863626-48863683)
chr4 (170-222)||(7908884-7908936)
chr4 (340-404)||(49040788-49040852)
chr4 (61-222)||(37826304-37826466)
chr4 (336-407)||(48870918-48870989)
chr4 (336-407)||(48876222-48876293)
chr4 (336-407)||(48886604-48886675)
chr4 (340-413)||(45365856-45365929)
chr4 (152-221)||(48155826-48155895)
chr4 (66-221)||(48863848-48863999)
chr4 (170-222)||(7905160-7905212)
chr4 (170-226)||(45371492-45371548)
chr4 (61-128)||(48853347-48853412)
chr4 (356-404)||(48903316-48903364)
chr4 (92-138)||(50669757-50669801)
chr4 (152-222)||(7801225-7801295)
chr4 (152-222)||(7823557-7823627)
chr4 (346-404)||(49048197-49048255)
chr4 (181-222)||(7814065-7814106)
chr4 (149-222)||(48147113-48147186)
chr4 (188-221)||(48734859-48734892)
chr4 (186-227)||(49043605-49043646)
chr4 (194-227)||(49048000-49048033)
chr4 (194-227)||(50669665-50669698)
chr4 (170-222)||(7771977-7772029)
chr4 (65-105)||(7772095-7772135)
chr4 (170-222)||(7790662-7790714)
chr4 (65-105)||(7790780-7790820)
chr4 (356-404)||(47208238-47208286)
chr4 (344-396)||(50669451-50669503)
[»] chr5 (10 HSPs)
chr5 (340-448)||(42561969-42562077)
chr5 (61-223)||(29688713-29688876)
chr5 (107-219)||(9120354-9120472)
chr5 (361-413)||(179410-179462)
chr5 (347-399)||(29696602-29696654)
chr5 (346-413)||(9120115-9120182)
chr5 (61-156)||(29696896-29696989)
chr5 (334-404)||(29688490-29688560)
chr5 (346-404)||(29712083-29712141)
chr5 (194-234)||(42561781-42561821)
[»] chr1 (10 HSPs)
chr1 (344-448)||(24367482-24367586)
chr1 (344-448)||(24416092-24416199)
chr1 (346-404)||(24310577-24310635)
chr1 (343-396)||(24323139-24323192)
chr1 (343-404)||(24340772-24340833)
chr1 (152-229)||(24340992-24341069)
chr1 (343-404)||(24353137-24353198)
chr1 (152-229)||(24353357-24353434)
chr1 (343-404)||(24369802-24369863)
chr1 (286-322)||(24367608-24367644)
[»] chr3 (7 HSPs)
chr3 (347-407)||(11024146-11024206)
chr3 (347-407)||(11005571-11005631)
chr3 (340-404)||(47451536-47451600)
chr3 (188-223)||(11014933-11014968)
chr3 (172-223)||(47451323-47451374)
chr3 (347-404)||(11015134-11015191)
chr3 (188-225)||(11023945-11023982)
[»] chr7 (5 HSPs)
chr7 (342-404)||(48884185-48884247)
chr7 (348-399)||(30165863-30165914)
chr7 (358-399)||(30130916-30130957)
chr7 (346-399)||(30119910-30119963)
chr7 (193-221)||(30119715-30119743)
[»] chr6 (4 HSPs)
chr6 (349-404)||(21016182-21016237)
chr6 (340-399)||(21979264-21979323)
chr6 (358-398)||(14197337-14197377)
chr6 (155-227)||(21016404-21016476)
[»] chr2 (2 HSPs)
chr2 (152-214)||(29351018-29351080)
chr2 (61-105)||(29351122-29351166)


Alignment Details
Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 15349681 - 15349472
Alignment:
Q  18 attacccacaaatgcagaaatgcaagcaaagtcatacgatacgaccctacaaatgcagccatccaacagtacataatacaatataattttataaatatca 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15349681 attacccacaaatgcagaaatgcaagcaaagtcatacgatacgaccctacaaatgcagtcatccaacagtacataatacaatataattttataaatatca 15349582  T
Q  118 ataaaatggtgaaggagaataactgaaaacttcattcttgtttgcgtcgtcctcttaagcctgctcattatcaccagggagtgaaagcagagactctgta 217  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15349581 ataaaatggtgaaggagaataactgaaaacctcattcttgtttgcgtcgtcctcttaagcctgctcattatcaccagggagtgaaagcagagactctgta 15349482  T
Q  218 tacatagcca 227  Q
    ||||||||||    
T  15349481 tacatagcca 15349472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 152 - 222
Target Start/End: Original strand, 4030191 - 4030261
Alignment:
Q  152 ttcttgtttgcgtcgtcctcttaagcctgctcattatcaccagggagtgaaagcagagactctgtatacat 222  Q
    |||||||||| ||| || |||||||| |||||||| | ||||||||||||||||||||||||||| |||||    
T  4030191 ttcttgtttgagtcatcttcttaagcttgctcattgttaccagggagtgaaagcagagactctgtgtacat 4030261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 12200971 - 12200916
Alignment:
Q  172 ttaagcctgctcattatcaccagggagtgaaagcagagactctgtatacatagcca 227  Q
    |||| ||||||||  |||||||||||||||||||||||||||||||||||| ||||    
T  12200971 ttaaacctgctcacgatcaccagggagtgaaagcagagactctgtatacatcgcca 12200916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 12445399 - 12445344
Alignment:
Q  172 ttaagcctgctcattatcaccagggagtgaaagcagagactctgtatacatagcca 227  Q
    |||| ||||||||  |||||||||||||||||||||||||||||||||||| ||||    
T  12445399 ttaaacctgctcacgatcaccagggagtgaaagcagagactctgtatacatcgcca 12445344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 12195939 - 12195901
Alignment:
Q  189 caccagggagtgaaagcagagactctgtatacatagcca 227  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  12195939 caccagggagtgaaagcagagactctgtatacatggcca 12195901  T

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Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 12440367 - 12440329
Alignment:
Q  189 caccagggagtgaaagcagagactctgtatacatagcca 227  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  12440367 caccagggagtgaaagcagagactctgtatacatggcca 12440329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 404
Target Start/End: Complemental strand, 15349305 - 15349244
Alignment:
Q  343 aagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaa 404  Q
    |||||||||| |||| |||||||| || | |||||||||||||| |||||||||||| ||||    
T  15349305 aagaacaagaatctttgtccaagaagagttcactttgtattctttcatcacccatatttcaa 15349244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 404
Target Start/End: Original strand, 4031577 - 4031626
Alignment:
Q  355 cttagtccaagatgaatgcactttgtattcttccatcacccatatatcaa 404  Q
    |||||||||||| ||||||| ||||||||||| ||| |||||||| ||||    
T  4031577 cttagtccaagacgaatgcattttgtattctttcataacccatatttcaa 4031626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 404
Target Start/End: Complemental strand, 12195742 - 12195685
Alignment:
Q  347 acaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaa 404  Q
    ||||||||||||||||||||||| ||   ||||||||||| |||| ||||||| ||||    
T  12195742 acaagagtcttagtccaagatgattgttgtttgtattctttcatctcccatatttcaa 12195685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 404
Target Start/End: Complemental strand, 12440170 - 12440113
Alignment:
Q  347 acaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaa 404  Q
    ||||||||||||||||||||||| ||   ||||||||||| |||| ||||||| ||||    
T  12440170 acaagagtcttagtccaagatgattgttgtttgtattctttcatctcccatatttcaa 12440113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 2e-44; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 61 - 227
Target Start/End: Complemental strand, 48871312 - 48871143
Alignment:
Q  61 accctacaaatgcagccatccaacagtacataatacaatataattttataaatatcaataaaatggtgaaggagaataactgaaaacttca---ttcttg 157  Q
    ||||||||||||||| || ||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||| | ||||| |||   ||||||    
T  48871312 accctacaaatgcagacacccaacagtacataattcaatataatgttataaatatcaagaaaatggtgaaggagaataattcaaaacctcattcttcttg 48871213  T
Q  158 tttgcgtcgtcctcttaagcctgctcattatcaccagggagtgaaagcagagactctgtatacatagcca 227  Q
    |||| |||  | |||||| |||||||||| ||||||||||||||||||| |||||||||||| |||||||    
T  48871212 tttgtgtcaccttcttaaacctgctcattgtcaccagggagtgaaagcaaagactctgtatagatagcca 48871143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 61 - 227
Target Start/End: Complemental strand, 48876616 - 48876447
Alignment:
Q  61 accctacaaatgcagccatccaacagtacataatacaatataattttataaatatcaataaaatggtgaaggagaataactgaaaacttca---ttcttg 157  Q
    ||||||||||||||| || ||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||| | ||||| |||   ||||||    
T  48876616 accctacaaatgcagacacccaacagtacataattcaatataatgttataaatatcaagaaaatggtgaaggagaataattcaaaacctcattcttcttg 48876517  T
Q  158 tttgcgtcgtcctcttaagcctgctcattatcaccagggagtgaaagcagagactctgtatacatagcca 227  Q
    |||| |||  | |||||| |||||||||| ||||||||||||||||||| |||||||||||| |||||||    
T  48876516 tttgtgtcaccttcttaaacctgctcattgtcaccagggagtgaaagcaaagactctgtatagatagcca 48876447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 61 - 227
Target Start/End: Complemental strand, 48886998 - 48886829
Alignment:
Q  61 accctacaaatgcagccatccaacagtacataatacaatataattttataaatatcaataaaatggtgaaggagaataactgaaaacttca---ttcttg 157  Q
    ||||||||||||||| || ||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||| | ||||| |||   ||||||    
T  48886998 accctacaaatgcagacacccaacagtacataattcaatataatgttataaatatcaagaaaatggtgaaggagaataattcaaaacctcattcttcttg 48886899  T
Q  158 tttgcgtcgtcctcttaagcctgctcattatcaccagggagtgaaagcagagactctgtatacatagcca 227  Q
    |||| |||  | |||||| |||||||||| ||||||||||||||||||| |||||||||||| |||||||    
T  48886898 tttgtgtcaccttcttaaacctgctcattgtcaccagggagtgaaagcaaagactctgtatagatagcca 48886829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 343 - 413
Target Start/End: Complemental strand, 7790502 - 7790432
Alignment:
Q  343 aagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaattgcatcat 413  Q
    |||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||| ||||||| |||||    
T  7790502 aagaacaagagttttagtccaagacgaatgcactttgtattctttcatcacccatatttcaattgtatcat 7790432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 340 - 413
Target Start/End: Complemental strand, 7786889 - 7786816
Alignment:
Q  340 aggaagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaattgcatcat 413  Q
    ||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||||| ||||||| |||||    
T  7786889 aggaagaacaagagtcttattccaagataaatgcacgttgtattctttcatcacccatatttcaattgtatcat 7786816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 7908731 - 7908663
Alignment:
Q  336 caacaggaagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaa 404  Q
    |||||| |||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||| ||||    
T  7908731 caacagaaagaacaagagttttattccaagatgaatgcactttgtattctttcatcacccatatttcaa 7908663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 340 - 404
Target Start/End: Complemental strand, 48864460 - 48864396
Alignment:
Q  340 aggaagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaa 404  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||| ||||    
T  48864460 aggaagaacaagaatcttagtccaagacgaatgcactttgtattctttcatcacccatatttcaa 48864396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 65 - 222
Target Start/End: Original strand, 7237065 - 7237222
Alignment:
Q  65 tacaaatgcagccatccaacagtacataatacaatataattttataaatatcaataaaatggtgaaggagaataactgaaaacttcatt---cttgtttg 161  Q
    |||||||||| ||| |||| ||||||||| |||||||||||  |||||||| || ||||   ||||||||||||  | | ||| |||||   ||||||||    
T  7237065 tacaaatgcaaccaaccaagagtacataaaacaatataatt--ataaatataaagaaaacaatgaaggagaatatttcacaacatcattgttcttgtttg 7237162  T
Q  162 cgtcgtcctcttaagcctgctcattatcaccagggagtgaaagcagagactctgtatacat 222  Q
     ||| || | |||||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  7237163 tgtcatctt-ttaagcatgctcattgtcaccaaggagtgaaagcagagactctgtatacat 7237222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 50666734 - 50666667
Alignment:
Q  346 aacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaattgcatcat 413  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||  ||||||| |||||    
T  50666734 aacaagagttttagtccaagatgaatgcactttgtattcttacatcacccataattcaattgtatcat 50666667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 343 - 413
Target Start/End: Complemental strand, 7878805 - 7878735
Alignment:
Q  343 aagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaattgcatcat 413  Q
    |||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||| |||| || |||||    
T  7878805 aagaacaagagttttaatccaagatgaatgcactttgtattctttcatcacccatatttcaactgtatcat 7878735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 413
Target Start/End: Complemental strand, 48853166 - 48853033
Alignment:
Q  286 aatatcaccactctttgtacaacatatagggaaaatgaagtcggtggga------ccaacaggaagaacaagagtcttagtccaagatgaatgcactttg 379  Q
    ||||||||||||||||||||||||||| ||| ||| | |||  ||||||      | || || |||||||||||||||||||||||| ||| ||||||||    
T  48853166 aatatcaccactctttgtacaacatattggggaaaagtagtgagtgggaatggaactaaaagaaagaacaagagtcttagtccaagacgaacgcactttg 48853067  T
Q  380 tattcttccatcacccatatatcaattgcatcat 413  Q
    ||||||| ||| |||||||| |||| || |||||    
T  48853066 tattctttcatgacccatatttcaactgtatcat 48853033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 404
Target Start/End: Original strand, 49038444 - 49038578
Alignment:
Q  270 aaccatctgttactacaatatcaccactctttgtacaacatatagggaaaatgaagtcggtgggaccaacaggaagaacaagagtcttagtccaagatga 369  Q
    ||||||||||| | | ||||| |||||| |||||||||||||||||| ||| | ||    ||  || || ||  ||||||||||||||||||||||| ||    
T  49038444 aaccatctgttccaataatatgaccactttttgtacaacatataggggaaaagtagggaatgccactaatagacagaacaagagtcttagtccaagacga 49038543  T
Q  370 atgcactttgtattcttccatcacccatatatcaa 404  Q
    ||| ||||||||||||| |||||||||||| ||||    
T  49038544 atgaactttgtattctttcatcacccatatttcaa 49038578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 340 - 413
Target Start/End: Complemental strand, 7766067 - 7765994
Alignment:
Q  340 aggaagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaattgcatcat 413  Q
    |||||||||||| ||||||||||| || |||| |||||||||||||| |||||||||||| ||||||| |||||    
T  7766067 aggaagaacaagtgtcttagtccatgacgaatacactttgtattctttcatcacccatatttcaattgtatcat 7765994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 336 - 413
Target Start/End: Complemental strand, 7771824 - 7771747
Alignment:
Q  336 caacaggaagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaattgcatcat 413  Q
    |||||| |||||||||||| |||||||| || ||||||||||||||||||| ||||||||||||  |||||| |||||    
T  7771824 caacagaaagaacaagagttttagtccatgacgaatgcactttgtattctttcatcacccatattacaattgtatcat 7771747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 404
Target Start/End: Original strand, 45371710 - 45371774
Alignment:
Q  340 aggaagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaa 404  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||| ||| |||||||| ||||    
T  45371710 aggaagaacaaaagtcttagtccaagacgaatgcactttgtattctttcataacccatatttcaa 45371774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 349 - 404
Target Start/End: Original strand, 48147358 - 48147413
Alignment:
Q  349 aagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaa 404  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||    
T  48147358 aagagtcttagtccaagacgaatgcactttgtattctttcatcacccatatttcaa 48147413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 336 - 406
Target Start/End: Complemental strand, 7813906 - 7813836
Alignment:
Q  336 caacaggaagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaatt 406  Q
    |||||| |||||||||||| ||| ||||||| ||||||||||||||||||| || ||||||||| ||||||    
T  7813906 caacagaaagaacaagagttttattccaagacgaatgcactttgtattctttcaacacccatatttcaatt 7813836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 346 - 404
Target Start/End: Original strand, 49043810 - 49043868
Alignment:
Q  346 aacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaa 404  Q
    |||||||||||||||||| || ||||||||||||||||||| |||||||||||| ||||    
T  49043810 aacaagagtcttagtccatgacgaatgcactttgtattctttcatcacccatatttcaa 49043868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 336 - 413
Target Start/End: Original strand, 7773457 - 7773534
Alignment:
Q  336 caacaggaagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaattgcatcat 413  Q
    |||||| |||||||||||  ||| ||||||| ||||||||||||||||||| |||||||||||| |||| || |||||    
T  7773457 caacagaaagaacaagagatttaatccaagacgaatgcactttgtattctttcatcacccatatttcaactgtatcat 7773534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 404
Target Start/End: Original strand, 45384528 - 45384592
Alignment:
Q  340 aggaagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaa 404  Q
    |||||||||| ||||||| |||||||| ||||||||||| ||||||| |||||||||||| ||||    
T  45384528 aggaagaacacgagtctttgtccaagacgaatgcactttatattctttcatcacccatatttcaa 45384592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 404
Target Start/End: Original strand, 48156065 - 48156129
Alignment:
Q  340 aggaagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaa 404  Q
    |||||| |||||||| ||||||||||| ||||||||||||||||| | |||||||||||| ||||    
T  48156065 aggaaggacaagagttttagtccaagaagaatgcactttgtattcgttcatcacccatatttcaa 48156129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 152 - 227
Target Start/End: Original strand, 45365623 - 45365698
Alignment:
Q  152 ttcttgtttgcgtcgtcctcttaagcctgctcattatcaccagggagtgaaagcagagactctgtatacatagcca 227  Q
    |||||||||| ||| || |||||||| |||||||| |||||||| ||||| |||| ||||||||||||||| ||||    
T  45365623 ttcttgtttgtgtcatcttcttaagcttgctcattgtcaccaggaagtgacagcaaagactctgtatacatggcca 45365698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 336 - 406
Target Start/End: Complemental strand, 7801066 - 7800996
Alignment:
Q  336 caacaggaagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaatt 406  Q
    |||||| |||||||||||| ||| ||||||| |||||||||||||| |||| || ||||||||| ||||||    
T  7801066 caacagaaagaacaagagttttattccaagacgaatgcactttgtaatctttcaacacccatatttcaatt 7800996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 413
Target Start/End: Original strand, 7237379 - 7237452
Alignment:
Q  340 aggaagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaattgcatcat 413  Q
    |||||| |||||||| ||||||||| | ||||||| ||||||||||| ||||||||||||  |||||| |||||    
T  7237379 aggaagcacaagagttttagtccaaaacgaatgcattttgtattctttcatcacccatattacaattgtatcat 7237452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 346 - 395
Target Start/End: Original strand, 37826632 - 37826681
Alignment:
Q  346 aacaagagtcttagtccaagatgaatgcactttgtattcttccatcaccc 395  Q
    ||||||||||||||||||||| ||||||| ||||||||||| ||||||||    
T  37826632 aacaagagtcttagtccaagacgaatgcagtttgtattctttcatcaccc 37826681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 152 - 221
Target Start/End: Original strand, 45384293 - 45384362
Alignment:
Q  152 ttcttgtttgcgtcgtcctcttaagcctgctcattatcaccagggagtgaaagcagagactctgtataca 221  Q
    |||||||||| ||| || |||||||| |||||||| |||||||  |||||||| ||||||||||||||||    
T  45384293 ttcttgtttgtgtcatcttcttaagcttgctcattgtcaccagaaagtgaaaggagagactctgtataca 45384362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 347 - 404
Target Start/End: Complemental strand, 48863683 - 48863626
Alignment:
Q  347 acaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaa 404  Q
    |||||||| ||| |||||||||||||||||  ||||||||||||||||||||| ||||    
T  48863683 acaagagttttaatccaagatgaatgcactccgtattcttccatcacccatatgtcaa 48863626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 7908936 - 7908884
Alignment:
Q  170 tcttaagcctgctcattatcaccagggagtgaaagcagagactctgtatacat 222  Q
    |||||| | |||||||| |||||||||||||||||||||||||| ||||||||    
T  7908936 tcttaaacttgctcattgtcaccagggagtgaaagcagagactcggtatacat 7908884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 404
Target Start/End: Original strand, 49040788 - 49040852
Alignment:
Q  340 aggaagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaa 404  Q
    |||||| |||||| | ||| |||||||||||||||||   |||||||||||||||||||||||||    
T  49040788 aggaagcacaagaattttaatccaagatgaatgcactccatattcttccatcacccatatatcaa 49040852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 222
Target Start/End: Original strand, 37826304 - 37826466
Alignment:
Q  61 accctacaaatgcagccatccaacagtacataatacaatataattttataaatatcaataaaatggtgaaggagaataactgaaaacttca---ttcttg 157  Q
    ||||||||||| ||| || |||| ||| |||||||||||||||  ||  ||||||||| |||||||||||||||||||  |  |||| |||   ||||||    
T  37826304 accctacaaatccagacacccaagagttcataatacaatataa--ttgaaaatatcaagaaaatggtgaaggagaatattttgaaacctcattcttcttg 37826401  T
Q  158 tttgcgtcgtcctcttaagcctgctcattatcaccagggagtgaaagcagagactctgtatacat 222  Q
    ||||  || || |||||| | |||||    ||| |||||| ||||||||||||||| ||||||||    
T  37826402 tttgtatcatcttcttaaacttgctctccgtcaacagggaatgaaagcagagactccgtatacat 37826466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 336 - 407
Target Start/End: Complemental strand, 48870989 - 48870918
Alignment:
Q  336 caacaggaagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaattg 407  Q
    |||||| ||||||||||||||| |||||||| || | |||||||||||| | ||||||||| || |||||||    
T  48870989 caacagaaagaacaagagtctttgtccaagacgagttcactttgtattcattcatcacccacatttcaattg 48870918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 336 - 407
Target Start/End: Complemental strand, 48876293 - 48876222
Alignment:
Q  336 caacaggaagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaattg 407  Q
    |||||| ||||||||||||||| |||||||| || | |||||||||||| | ||||||||| || |||||||    
T  48876293 caacagaaagaacaagagtctttgtccaagacgagttcactttgtattcattcatcacccacatttcaattg 48876222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 336 - 407
Target Start/End: Complemental strand, 48886675 - 48886604
Alignment:
Q  336 caacaggaagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaattg 407  Q
    |||||| ||||||||||||||| |||||||| || | |||||||||||| | ||||||||| || |||||||    
T  48886675 caacagaaagaacaagagtctttgtccaagacgagttcactttgtattcattcatcacccacatttcaattg 48886604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 413
Target Start/End: Original strand, 45365856 - 45365929
Alignment:
Q  340 aggaagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaattgcatcat 413  Q
    |||||||||  ||||||| |||||||| ||| ||||||| ||||||| |||||||||||| |||| || |||||    
T  45365856 aggaagaacgtgagtctttgtccaagacgaacgcactttatattctttcatcacccatatttcaactgtatcat 45365929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 152 - 221
Target Start/End: Original strand, 48155826 - 48155895
Alignment:
Q  152 ttcttgtttgcgtcgtcctcttaagcctgctcattatcaccagggagtgaaagcagagactctgtataca 221  Q
    |||||||||| |  ||| ||||| || ||| |||| ||||||||||||||||||| ||||||||||||||    
T  48155826 ttcttgtttgtgatgtcttcttaggcttgcacattgtcaccagggagtgaaagcaaagactctgtataca 48155895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 221
Target Start/End: Complemental strand, 48863999 - 48863848
Alignment:
Q  66 acaaatgcagccatccaacagtacataatacaatataattttataaatatcaataaaatggtgaaggagaataactgaaaacttcattcttgtttgcgtc 165  Q
    ||||||||||||| | ||  || ||||| |||||||||||  ||||||||| | ||||||||  |||||||||  |  |||| ||||  || || | |||    
T  48863999 acaaatgcagccaccgaatggttcataaaacaatataatt--ataaatatccagaaaatggtccaggagaatattt--aaacctcatgattcttggtgtc 48863904  T
Q  166 gtcctcttaagcctgctcattatcaccagggagtgaaagcagagactctgtataca 221  Q
     || |||||||| |||||| | |||  |||||||||||||||||||||||||||||    
T  48863903 atcttcttaagcttgctcactgtcattagggagtgaaagcagagactctgtataca 48863848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 7905212 - 7905160
Alignment:
Q  170 tcttaagcctgctcattatcaccagggagtgaaagcagagactctgtatacat 222  Q
    |||||| | ||||| |||||||| |||||||||||||||||||| ||||||||    
T  7905212 tcttaaacttgctcgttatcaccggggagtgaaagcagagactccgtatacat 7905160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 45371492 - 45371548
Alignment:
Q  170 tcttaagcctgctcattatcaccagggagtgaaagcagagactctgtatacatagcc 226  Q
    |||||||| || ||||| || | || |||||||||||||||||||||||||||||||    
T  45371492 tcttaagcttgatcattgtcgctagagagtgaaagcagagactctgtatacatagcc 45371548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 128
Target Start/End: Complemental strand, 48853412 - 48853347
Alignment:
Q  61 accctacaaatgcagccatccaacagtacataatacaatataattttataaatatcaataaaatggtg 128  Q
    |||||| ||||||||| |||||| ||||||||||||||||||   ||||||  |||||||||||||||    
T  48853412 accctaaaaatgcagctatccaaaagtacataatacaatata--gttataataatcaataaaatggtg 48853347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 404
Target Start/End: Complemental strand, 48903364 - 48903316
Alignment:
Q  356 ttagtccaagatgaatgcactttgtattcttccatcacccatatatcaa 404  Q
    |||||||||||  |||||||||||||||||| |||||||||||| ||||    
T  48903364 ttagtccaagacaaatgcactttgtattctttcatcacccatatttcaa 48903316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 50669801 - 50669757
Alignment:
Q  92 aatacaatataattttataaatatcaataaaatggtgaaggagaata 138  Q
    ||||||||||||||  |||||||| ||||||||||||||||||||||    
T  50669801 aatacaatataatt--ataaatataaataaaatggtgaaggagaata 50669757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 222
Target Start/End: Complemental strand, 7801295 - 7801225
Alignment:
Q  152 ttcttgtttgcgtcgtcctcttaagcctgctcattatcaccagggagtgaaagcagagactctgtatacat 222  Q
    |||||||||  ||| || |||||| | | |||||| || ||||||||||||||||||||||| ||||||||    
T  7801295 ttcttgtttttgtcatcttcttaaacttactcattgtccccagggagtgaaagcagagactcggtatacat 7801225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 222
Target Start/End: Complemental strand, 7823627 - 7823557
Alignment:
Q  152 ttcttgtttgcgtcgtcctcttaagcctgctcattatcaccagggagtgaaagcagagactctgtatacat 222  Q
    |||||||||  ||| || |||||| | | |||||| || ||||||||||||||||||||||| ||||||||    
T  7823627 ttcttgtttttgtcatcttcttaaacttactcattgtccccagggagtgaaagcagagactcggtatacat 7823557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 346 - 404
Target Start/End: Original strand, 49048197 - 49048255
Alignment:
Q  346 aacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaa 404  Q
    ||||| |||||||||||| || ||||||||||| || |||| |||||||||||| ||||    
T  49048197 aacaaaagtcttagtccatgacgaatgcactttatactctttcatcacccatatttcaa 49048255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 7814106 - 7814065
Alignment:
Q  181 ctcattatcaccagggagtgaaagcagagactctgtatacat 222  Q
    |||||| || ||||||||||||||||||||||| ||||||||    
T  7814106 ctcattgtccccagggagtgaaagcagagactcggtatacat 7814065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 48147113 - 48147186
Alignment:
Q  149 tcattcttgtttgcgtcgtcctcttaagcctgctcattatcaccagggagtgaaagcagagactctgtatacat 222  Q
    ||||||||||||| ||| || ||||| |   || |||| |||| ||||||||||||||||||||| ||||||||    
T  48147113 tcattcttgtttgtgtcatcttcttagggtagcacattgtcactagggagtgaaagcagagactcagtatacat 48147186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 221
Target Start/End: Original strand, 48734859 - 48734892
Alignment:
Q  188 tcaccagggagtgaaagcagagactctgtataca 221  Q
    ||||| ||||||||||||||||||||||||||||    
T  48734859 tcaccggggagtgaaagcagagactctgtataca 48734892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 227
Target Start/End: Original strand, 49043605 - 49043646
Alignment:
Q  186 tatcaccagggagtgaaagcagagactctgtatacatagcca 227  Q
    ||||||| ||||||||||||| |||||||||||| |||||||    
T  49043605 tatcaccggggagtgaaagcaaagactctgtatagatagcca 49043646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 49048000 - 49048033
Alignment:
Q  194 gggagtgaaagcagagactctgtatacatagcca 227  Q
    ||||||||||||| ||||||||||||||||||||    
T  49048000 gggagtgaaagcaaagactctgtatacatagcca 49048033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 227
Target Start/End: Complemental strand, 50669698 - 50669665
Alignment:
Q  194 gggagtgaaagcagagactctgtatacatagcca 227  Q
    ||||||||||| ||||||||||||||||||||||    
T  50669698 gggagtgaaagtagagactctgtatacatagcca 50669665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 7772029 - 7771977
Alignment:
Q  170 tcttaagcctgctcattatcaccagggagtgaaagcagagactctgtatacat 222  Q
    |||||| | |||||||| |||||| | |||||||||||||| |||||||||||    
T  7772029 tcttaatcatgctcattgtcaccaagtagtgaaagcagagattctgtatacat 7771977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 7772135 - 7772095
Alignment:
Q  65 tacaaatgcagccatccaacagtacataatacaatataatt 105  Q
    |||||||||||||| |||| ||||||||| |||||||||||    
T  7772135 tacaaatgcagccacccaagagtacataaaacaatataatt 7772095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 7790714 - 7790662
Alignment:
Q  170 tcttaagcctgctcattatcaccagggagtgaaagcagagactctgtatacat 222  Q
    |||||| | |||||||| |||||| | |||||||||||||| |||||||||||    
T  7790714 tcttaatcatgctcattgtcaccaagtagtgaaagcagagattctgtatacat 7790662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 7790820 - 7790780
Alignment:
Q  65 tacaaatgcagccatccaacagtacataatacaatataatt 105  Q
    |||||||||||||| |||| ||||||||| |||||||||||    
T  7790820 tacaaatgcagccacccaagagtacataaaacaatataatt 7790780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 404
Target Start/End: Complemental strand, 47208286 - 47208238
Alignment:
Q  356 ttagtccaagatgaatgcactttgtattcttccatcacccatatatcaa 404  Q
    |||||||||||||| || ||||||||||||| |||||||| ||| ||||    
T  47208286 ttagtccaagatgattgtactttgtattctttcatcacccttatttcaa 47208238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 396
Target Start/End: Complemental strand, 50669503 - 50669451
Alignment:
Q  344 agaacaagagtcttagtccaagatgaatgcactttgtattcttccatcaccca 396  Q
    |||| ||||||||||||||||||||||||||  ||| | |||| |||||||||    
T  50669503 agaataagagtcttagtccaagatgaatgcaacttggaatctttcatcaccca 50669451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 1e-30; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 340 - 448
Target Start/End: Original strand, 42561969 - 42562077
Alignment:
Q  340 aggaagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaattgcatcatatctcaaaatccatagactgaaaaat 439  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    ||| |  ||||||||||||||||||| ||||    
T  42561969 aggaagaacaagaatcttagtccaagatgaatgcactttgtattctttcatcacccatatatcaacattatcgtccctcaaaatccatagactgagaaat 42562068  T
Q  440 cctctaaat 448  Q
    |||||||||    
T  42562069 cctctaaat 42562077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 61 - 223
Target Start/End: Complemental strand, 29688876 - 29688713
Alignment:
Q  61 accctacaaatgcagccatccaacagtacataatacaatataattttataaatatcaataaaatggtgaaggagaataactgaaaacttcattcttgttt 160  Q
    ||||||| ||||||||||  ||| |||||||||||| ||||||||  ||||| ||||  ||||||||||||| |||||  ||||||| |||||||||| |    
T  29688876 accctacgaatgcagccactcaagagtacataatactatataatt--ataaagatcatgaaaatggtgaaggggaatacttgaaaacctcattcttgtct 29688779  T
Q  161 gcgtcgtcctcttaagcctgctca---ttatcaccagggagtgaaagcagagactctgtatacata 223  Q
    ||||| || ||||||||||| |||   | | ||||||| |||||||||||||| ||||||||||||    
T  29688778 gcgtcatcttcttaagcctgatcactgtcaccaccaggaagtgaaagcagagattctgtatacata 29688713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 107 - 219
Target Start/End: Complemental strand, 9120472 - 9120354
Alignment:
Q  107 tataaatatcaataaaatggtgaaggagaataactgaaaacttcattctt------gtttgcgtcgtcctcttaagcctgctcattatcaccagggagtg 200  Q
    |||||| ||||| |||||||||||||||||||  | ||||| ||||||||      ||||| ||| ||  ||||||| || ||||| |||||||||||||    
T  9120472 tataaaaatcaagaaaatggtgaaggagaatatttcaaaacctcattcttcttcttgtttgtgtcatctccttaagcttgttcattgtcaccagggagtg 9120373  T
Q  201 aaagcagagactctgtata 219  Q
    |||||||||||||||||||    
T  9120372 aaagcagagactctgtata 9120354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 179462 - 179410
Alignment:
Q  361 ccaagatgaatgcactttgtattcttccatcacccatatatcaattgcatcat 413  Q
    |||||||||||||||||||||||||| |||||||||||| |||| || |||||    
T  179462 ccaagatgaatgcactttgtattctttcatcacccatatttcaactgtatcat 179410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 399
Target Start/End: Complemental strand, 29696654 - 29696602
Alignment:
Q  347 acaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatat 399  Q
    |||||||||||||||||||| || ||||| ||||||| |||||||||||||||    
T  29696654 acaagagtcttagtccaagaggattgcacattgtatttttccatcacccatat 29696602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 9120182 - 9120115
Alignment:
Q  346 aacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaattgcatcat 413  Q
    ||||||||| ||  ||||||| ||||||||||||||||||| |||||||||||| |||| || |||||    
T  9120182 aacaagagttttcttccaagaggaatgcactttgtattctttcatcacccatatttcaactgtatcat 9120115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 29696989 - 29696896
Alignment:
Q  61 accctacaaatgcagccatccaacagtacataatacaatataattttataaatatcaataaaatggtgaaggagaataactgaaaacttcattctt 156  Q
    |||||||||||||||| |  ||| ||| |||||||||||||||  ||||||| ||||  |||||||||||| ||||||  | ||||| ||||||||    
T  29696989 accctacaaatgcagctactcaagagtccataatacaatataa--ttataaagatcatgaaaatggtgaagaagaatacttcaaaacctcattctt 29696896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 404
Target Start/End: Complemental strand, 29688560 - 29688490
Alignment:
Q  334 accaacaggaagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaa 404  Q
    ||||| || |||||| |||||||| |||||||| || ||||| ||||||| || |||||||||||| ||||    
T  29688560 accaaaagaaagaacgagagtctttgtccaagacgattgcacattgtattttttcatcacccatatttcaa 29688490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 346 - 404
Target Start/End: Original strand, 29712083 - 29712141
Alignment:
Q  346 aacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaa 404  Q
    ||||||||||||||||||||| ||   ||| ||||||| ||||||||||||||| ||||    
T  29712083 aacaagagtcttagtccaagaagatgtcacattgtatttttccatcacccatatttcaa 29712141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 42561781 - 42561821
Alignment:
Q  194 gggagtgaaagcagagactctgtatacatagccaatagaaa 234  Q
    |||||||||||||  ||||||||||||||||||||| ||||    
T  42561781 gggagtgaaagcaatgactctgtatacatagccaatcgaaa 42561821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 344 - 448
Target Start/End: Complemental strand, 24367586 - 24367482
Alignment:
Q  344 agaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaattgcatcatatctcaaaatccatagactgaaaaatcctc 443  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||| || || |||    ||||||| ||||||||||| ||||||||    
T  24367586 agaacaagagttttagtccaagacgaatgcactttgtattcttccattacccatatataaagtgtatctctcctcaaaacccatagactgagaaatcctc 24367487  T
Q  444 taaat 448  Q
    |||||    
T  24367486 taaat 24367482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 344 - 448
Target Start/End: Complemental strand, 24416199 - 24416092
Alignment:
Q  344 agaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaattgcatc---atatctcaaaatccatagactgaaaaatc 440  Q
    ||||||||||| |||||||||||||| ||| |||||||||||| ||||||||||||||||| |  |||   | | ||||||| ||||||||||| |||||    
T  24416199 agaacaagagttttagtccaagatgactgccctttgtattctttcatcacccatatatcaactctatccttaaacctcaaaacccatagactgagaaatc 24416100  T
Q  441 ctctaaat 448  Q
    ||||||||    
T  24416099 ctctaaat 24416092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 346 - 404
Target Start/End: Complemental strand, 24310635 - 24310577
Alignment:
Q  346 aacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaa 404  Q
    ||||||||| ||| ||||||| || |||||||||||||||| |||||||||||||||||    
T  24310635 aacaagagttttactccaagaagactgcactttgtattctttcatcacccatatatcaa 24310577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 396
Target Start/End: Complemental strand, 24323192 - 24323139
Alignment:
Q  343 aagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcaccca 396  Q
    |||||||||||| |||||| ||||||| |||||||||||||||| |||||||||    
T  24323192 aagaacaagagttttagtcgaagatgactgcactttgtattctttcatcaccca 24323139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 404
Target Start/End: Complemental strand, 24340833 - 24340772
Alignment:
Q  343 aagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaa 404  Q
    |||||||||||| |||||||||||||| |||||||| ||||||| ||| ||||| |||||||    
T  24340833 aagaacaagagttttagtccaagatgactgcactttatattctttcattacccagatatcaa 24340772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 152 - 229
Target Start/End: Complemental strand, 24341069 - 24340992
Alignment:
Q  152 ttcttgtttgcgtcgtcctcttaagcctgctcattatcaccagggagtgaaagcagagactctgtatacatagccaat 229  Q
    |||||||||| | | || |||||||| | |||||| |||| |||||||||||||| |||||| |||||||||||||||    
T  24341069 ttcttgtttgtgccatcttcttaagcttcctcattgtcactagggagtgaaagcaaagactccgtatacatagccaat 24340992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 404
Target Start/End: Complemental strand, 24353198 - 24353137
Alignment:
Q  343 aagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaa 404  Q
    |||||||||||| |||||||||||||| |||||||| ||||||| ||| ||||| |||||||    
T  24353198 aagaacaagagttttagtccaagatgactgcactttatattctttcattacccagatatcaa 24353137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 152 - 229
Target Start/End: Complemental strand, 24353434 - 24353357
Alignment:
Q  152 ttcttgtttgcgtcgtcctcttaagcctgctcattatcaccagggagtgaaagcagagactctgtatacatagccaat 229  Q
    |||||||||| | | || |||||||| | |||||| |||| |||||||||||||| |||||| |||||||||||||||    
T  24353434 ttcttgtttgtgccatcttcttaagcttcctcattgtcactagggagtgaaagcaaagactccgtatacatagccaat 24353357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 404
Target Start/End: Complemental strand, 24369863 - 24369802
Alignment:
Q  343 aagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaa 404  Q
    |||||||||||| |||||||||||||||||||||   || | ||||||||||||||||||||    
T  24369863 aagaacaagagttttagtccaagatgaatgcactccatactattccatcacccatatatcaa 24369802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 322
Target Start/End: Complemental strand, 24367644 - 24367608
Alignment:
Q  286 aatatcaccactctttgtacaacatatagggaaaatg 322  Q
    |||||||||| | ||||||||||||||||||||||||    
T  24367644 aatatcaccagtttttgtacaacatatagggaaaatg 24367608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 347 - 407
Target Start/End: Original strand, 11024146 - 11024206
Alignment:
Q  347 acaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaattg 407  Q
    |||||||||||||||||||| ||||||||||||||||||| ||| |||||||| |||||||    
T  11024146 acaagagtcttagtccaagacgaatgcactttgtattctttcataacccatatttcaattg 11024206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 347 - 407
Target Start/End: Original strand, 11005571 - 11005631
Alignment:
Q  347 acaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaattg 407  Q
    ||||||| |||||||||||| ||||||||||||||||||| ||| |||||||| |||||||    
T  11005571 acaagagccttagtccaagacgaatgcactttgtattctttcataacccatatttcaattg 11005631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 404
Target Start/End: Original strand, 47451536 - 47451600
Alignment:
Q  340 aggaagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaa 404  Q
    ||||||||||||||||||   |||||| ||||  ||||||||||||| |||||||||||| ||||    
T  47451536 aggaagaacaagagtcttttcccaagacgaattaactttgtattctttcatcacccatatttcaa 47451600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 223
Target Start/End: Original strand, 11014933 - 11014968
Alignment:
Q  188 tcaccagggagtgaaagcagagactctgtatacata 223  Q
    ||||||||||||||||||||||||||||| ||||||    
T  11014933 tcaccagggagtgaaagcagagactctgtgtacata 11014968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 47451323 - 47451374
Alignment:
Q  172 ttaagcctgctcattatcaccagggagtgaaagcagagactctgtatacata 223  Q
    |||||| |||||||| ||||| || |||||||||||||||||||| ||||||    
T  47451323 ttaagcttgctcattgtcaccgggaagtgaaagcagagactctgtgtacata 47451374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 404
Target Start/End: Original strand, 11015134 - 11015191
Alignment:
Q  347 acaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaa 404  Q
    |||||||| |||  |||||| ||||||||||||||||||| ||| |||||||| ||||    
T  11015134 acaagagttttaacccaagacgaatgcactttgtattctttcataacccatatttcaa 11015191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 225
Target Start/End: Original strand, 11023945 - 11023982
Alignment:
Q  188 tcaccagggagtgaaagcagagactctgtatacatagc 225  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  11023945 tcaccggggagtgaaagcagggactctgtatacatagc 11023982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 342 - 404
Target Start/End: Complemental strand, 48884247 - 48884185
Alignment:
Q  342 gaagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaa 404  Q
    |||||||||||||||||||||||||   ||||||||||||||||| ||||||| |||| ||||    
T  48884247 gaagaacaagagtcttagtccaagacatatgcactttgtattctttcatcacctatatttcaa 48884185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 348 - 399
Target Start/End: Complemental strand, 30165914 - 30165863
Alignment:
Q  348 caagagtcttagtccaagatgaatgcactttgtattcttccatcacccatat 399  Q
    |||||||| ||||||||||||||||||||  |||||||| ||||||||||||    
T  30165914 caagagtcgtagtccaagatgaatgcactgcgtattcttgcatcacccatat 30165863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 358 - 399
Target Start/End: Original strand, 30130916 - 30130957
Alignment:
Q  358 agtccaagatgaatgcactttgtattcttccatcacccatat 399  Q
    ||||||||||||||||||| ||||||||| ||||||||||||    
T  30130916 agtccaagatgaatgcactgtgtattcttgcatcacccatat 30130957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 399
Target Start/End: Original strand, 30119910 - 30119963
Alignment:
Q  346 aacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatat 399  Q
    ||||||||||||| |||||||||||||||||   ||||||| ||| ||||||||    
T  30119910 aacaagagtcttaatccaagatgaatgcactgcatattcttgcattacccatat 30119963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 221
Target Start/End: Original strand, 30119715 - 30119743
Alignment:
Q  193 agggagtgaaagcagagactctgtataca 221  Q
    |||||||||||||||||||||||||||||    
T  30119715 agggagtgaaagcagagactctgtataca 30119743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000005; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 349 - 404
Target Start/End: Complemental strand, 21016237 - 21016182
Alignment:
Q  349 aagagtcttagtccaagatgaatgcactttgtattcttccatcacccatatatcaa 404  Q
    |||||||||||||||||| ||||| ||||||||||||| ||| |||||||| ||||    
T  21016237 aagagtcttagtccaagacgaatgtactttgtattctttcataacccatatttcaa 21016182  T

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Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 399
Target Start/End: Original strand, 21979264 - 21979323
Alignment:
Q  340 aggaagaacaagagtcttagtccaagatgaatgcactttgtattcttccatcacccatat 399  Q
    ||||||||||||  ||||| ||||||| ||| ||||||||||||||| ||||||||||||    
T  21979264 aggaagaacaagtttcttattccaagaggaacgcactttgtattctttcatcacccatat 21979323  T

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Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 358 - 398
Target Start/End: Original strand, 14197337 - 14197377
Alignment:
Q  358 agtccaagatgaatgcactttgtattcttccatcacccata 398  Q
    ||||||||||||||||| ||||||||||| |||||||||||    
T  14197337 agtccaagatgaatgcattttgtattctttcatcacccata 14197377  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 21016476 - 21016404
Alignment:
Q  155 ttgtttgcgtcgtcctcttaagcctgctcattatcaccagggagtgaaagcagagactctgtatacatagcca 227  Q
    ||||||| ||| || |||||| | || || || ||| ||||||||||||||| |||||||||||||| |||||    
T  21016476 ttgtttgtgtcatcttcttaatcttggtcgttgtcatcagggagtgaaagcaaagactctgtatacacagcca 21016404  T

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Target: chr2 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 29351080 - 29351018
Alignment:
Q  152 ttcttgtttgcgtcgtcctcttaagcctgctcattatcaccagggagtgaaagcagagactct 214  Q
    |||||||||| ||| || |||||||| |||||||| ||||| ||||||||||||| |||||||    
T  29351080 ttcttgtttgagtcatcttcttaagcttgctcattgtcaccggggagtgaaagcatagactct 29351018  T

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Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 29351166 - 29351122
Alignment:
Q  61 accctacaaatgcagccatccaacagtacataatacaatataatt 105  Q
    |||||||||||||| ||| |||| ||| |||||||||||||||||    
T  29351166 accctacaaatgcaaccacccaagagttcataatacaatataatt 29351122  T

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